View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20674_low_15 (Length: 347)
Name: NF20674_low_15
Description: NF20674
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20674_low_15 |
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Alignment Details
Target: chr4 (Bit Score: 304; Significance: 1e-171; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 304; E-Value: 1e-171
Query Start/End: Original strand, 26 - 341
Target Start/End: Complemental strand, 22569167 - 22568852
Alignment:
| Q |
26 |
catggaaagtatcattggtaccgtgttttccaacttcgagtattaaagctgattcaaacaagttgtcctgaagaatatctgatcaacattaaaattattg |
125 |
Q |
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| T |
22569167 |
catggaaagcatcattggtaccgtgttttccaacttcgagtattaaagctgattcaaacaagttgtcctgaagaatatctgatcaacattaaaattattg |
22569068 |
T |
|
| Q |
126 |
aggctattgctgataatacatcaattttaattttggggacaagttgtgttatgattaatctcaatgtttttctctggtagtttcaatgaccttgtagttt |
225 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
22569067 |
aggctattgctgataatacatcaattttaattttggggacaagttgtgttatgattaatctcaatgtttttctctggtagtttcaatgaccttgtagttt |
22568968 |
T |
|
| Q |
226 |
ttcttttatataatgtatgcaggttaattcttgaaatagtttttgttttggatgaaaggcgataccgttggaacttattctctttttatgtgaaatattg |
325 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| || |
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| T |
22568967 |
ttcttttatataatgtatgcaggttaattcttgaaatagtttttgttttggatgaaaggcgatactgttggaacttattctctttttatgtgaaatactg |
22568868 |
T |
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| Q |
326 |
ttggaattttcttcga |
341 |
Q |
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|||||||||||||||| |
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| T |
22568867 |
ttggaattttcttcga |
22568852 |
T |
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