View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20674_low_18 (Length: 301)
Name: NF20674_low_18
Description: NF20674
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20674_low_18 |
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Alignment Details
Target: chr4 (Bit Score: 267; Significance: 1e-149; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 17 - 287
Target Start/End: Original strand, 44457704 - 44457974
Alignment:
| Q |
17 |
caggaactactccaaagaaatttcgagtcagaggaaagtgaatgacaaagaaacagaagatggggtcaaccagattaaagttcttcatctttggcataac |
116 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
44457704 |
caggaactactccaaagaaatttcgagtcagaggaaagtgaatgacaaagaaacagaagatggggtcaaccagattaaagttctccatctttggcataac |
44457803 |
T |
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| Q |
117 |
gccattaagaaagatttgaaagaaattctgcaagagctttatctaataagaaattcaggttctggatgttctcaaaatttagactcaatacttatccagc |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44457804 |
gccattaagaaagatttgaaagaaattctgcaagagctttatctaataagaaattcaggttctggatgttctcaaaatttagactcaatacttatccagc |
44457903 |
T |
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| Q |
217 |
taaaattcttggctgatgtcctcatcatttacaggtaatatttctgacatgtcctacttttttggtctgtg |
287 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44457904 |
taaaattcttggctgatgtcctcatcatttacaggtaatatttctgacatgtcctacttttttggtctgtg |
44457974 |
T |
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