View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20674_low_30 (Length: 240)
Name: NF20674_low_30
Description: NF20674
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20674_low_30 |
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Alignment Details
Target: chr6 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 19 - 214
Target Start/End: Complemental strand, 28740245 - 28740050
Alignment:
| Q |
19 |
agagtcatatatgaaaaatccaaaaataaatgcattttcaggtgtaaggtcgttggaactttattcatattcatatgttatatgcataagcaatgcaatg |
118 |
Q |
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| T |
28740245 |
agagtcatatatgaaaaatccaaaaatcaatgcattttcaggtgtaaggtcgttggaactttattcatattcatatgttatatgcataagcaatgcaatg |
28740146 |
T |
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| Q |
119 |
gataggattgcaagatttggttcctcaccaaaagaaaatactgacaaaccaaataaaaatgtgtagattatgtttagctagaagcttgcaagttgg |
214 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28740145 |
gataggattgcaagatttggttcctcaccaaaagaaaatactgacaaaccaaataaaaatgtgtagattatgtttagctagaagcttgcaagttgg |
28740050 |
T |
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