View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20675_low_42 (Length: 240)
Name: NF20675_low_42
Description: NF20675
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20675_low_42 |
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Alignment Details
Target: chr6 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 19 - 239
Target Start/End: Complemental strand, 31332083 - 31331863
Alignment:
| Q |
19 |
gtgacatattttcatttatttagggtccactaaagcaaccacagccatgtctccatactatatatcaatcatgtaacaaagataggtaatgggtctcact |
118 |
Q |
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| T |
31332083 |
gtgatatattttcatttatttagggtccactaaagcaaccacagccatgtctccatactatatatcaatcatgtaacaaagataggtaatgggtctcact |
31331984 |
T |
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| Q |
119 |
caaaagttcatgacatatttcaaatatataggttatgtttttggttacactttttattgcaacaaaacaactttttatggtaatgccaattgtggattaa |
218 |
Q |
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| T |
31331983 |
caaaagttcatgacatatttcaaatatataggttatgtttttggttacactttttattgcaacaaaacaactttttatggtaatgccaattgtggattaa |
31331884 |
T |
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| Q |
219 |
gatagatggcactgtgggatc |
239 |
Q |
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||||||||||||||||||||| |
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| T |
31331883 |
gatagatggcactgtgggatc |
31331863 |
T |
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