View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20676_high_8 (Length: 255)
Name: NF20676_high_8
Description: NF20676
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20676_high_8 |
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Alignment Details
Target: chr2 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 39631414 - 39631649
Alignment:
| Q |
1 |
tgataccacgcaaatctttctgacttattcagaattaaaaagggagcaaaagatttccaaaaccttgacaatatatgcctttgaaacttgtttaactcat |
100 |
Q |
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| T |
39631414 |
tgataccactcaaatctttctgacttattcagaattaaaaagggagcaaaagatttccaaaaccttgacaatatatgcctttgaaacttgtttaactcat |
39631513 |
T |
|
| Q |
101 |
aacttaaggtatgtacaactaatcttaatactataattgattaaa-tactgatggctgatcatcttttgtttattgattaaacgtacgtggcatcttaat |
199 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39631514 |
aacttaaggtatgtacaactaatcttaatactataattgattaaattactgatggctgatcatcttttgtttattgattaaacgtacgtggcatcttaat |
39631613 |
T |
|
| Q |
200 |
ctccccgaaatgttaaagctcattcaaacaaattgt |
235 |
Q |
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|||||||||||||||||||||||||||||||||||| |
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| T |
39631614 |
ctccccgaaatgttaaagctcattcaaacaaattgt |
39631649 |
T |
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