View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20676_low_12 (Length: 227)
Name: NF20676_low_12
Description: NF20676
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20676_low_12 |
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Alignment Details
Target: chr2 (Bit Score: 182; Significance: 2e-98; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 19 - 208
Target Start/End: Original strand, 39318818 - 39319007
Alignment:
| Q |
19 |
cataggccaaactcaatcatcgaaccaagtcaacaaccttggatccatcctgcttcccaaatgcctccaacgactaaccaaggaccattcactctcaaac |
118 |
Q |
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| T |
39318818 |
cataggccaaactcaatcatcgaaccaagtcaacaaccttggatccatcctgcttcccaaatgcctccaacgactaaccaaggaccgttcactctcaaac |
39318917 |
T |
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| Q |
119 |
ttcctaacgacacataatagacaaagatagacattgatggcacaccgcttcgtaaggttcccattcaaacaactaacaactcgaaaatca |
208 |
Q |
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| T |
39318918 |
gtcctaacgacacataatagacaaagatagacattgatggcacaccgcttcgtaaggttcccattcaaacaactaacaactcgaaaatca |
39319007 |
T |
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