View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20678_high_10 (Length: 270)

Name: NF20678_high_10
Description: NF20678
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20678_high_10
NF20678_high_10
[»] chr7 (58 HSPs)
chr7 (18-257)||(22087192-22087429)
chr7 (105-270)||(30756785-30756950)
chr7 (105-270)||(37837424-37837589)
chr7 (105-269)||(42978570-42978734)
chr7 (105-264)||(39328762-39328921)
chr7 (105-270)||(19296830-19296995)
chr7 (105-262)||(8001520-8001677)
chr7 (105-270)||(9450103-9450268)
chr7 (105-270)||(24770206-24770371)
chr7 (105-270)||(46699995-46700160)
chr7 (105-270)||(47590271-47590436)
chr7 (108-269)||(28476183-28476351)
chr7 (105-259)||(34899584-34899738)
chr7 (105-262)||(5348566-5348723)
chr7 (111-270)||(38798747-38798906)
chr7 (108-270)||(24350805-24350972)
chr7 (108-270)||(35132903-35133072)
chr7 (105-270)||(12141274-12141439)
chr7 (105-270)||(48316778-48316943)
chr7 (105-256)||(9977186-9977337)
chr7 (105-263)||(39228975-39229132)
chr7 (108-263)||(38880551-38880709)
chr7 (107-263)||(45349772-45349928)
chr7 (108-270)||(22742900-22743069)
chr7 (25-270)||(25255124-25255352)
chr7 (108-264)||(41553406-41553565)
chr7 (108-264)||(41553751-41553910)
chr7 (108-264)||(41554096-41554255)
chr7 (105-264)||(48061382-48061541)
chr7 (28-234)||(26623791-26623990)
chr7 (132-263)||(5792783-5792914)
chr7 (108-270)||(24069360-24069525)
chr7 (109-270)||(13796895-13797059)
chr7 (108-270)||(19404723-19404885)
chr7 (108-243)||(1749140-1749282)
chr7 (105-163)||(40993142-40993200)
chr7 (108-253)||(44311775-44311922)
chr7 (24-93)||(26610880-26610949)
chr7 (105-270)||(4530037-4530201)
chr7 (198-263)||(5000002-5000067)
chr7 (105-270)||(39171556-39171721)
chr7 (105-262)||(27997048-27997205)
chr7 (108-243)||(3394434-3394574)
chr7 (182-257)||(24610149-24610224)
chr7 (198-264)||(11343863-11343929)
chr7 (124-229)||(3267219-3267324)
chr7 (158-243)||(29617693-29617778)
chr7 (116-264)||(32675360-32675510)
chr7 (109-169)||(48930730-48930793)
chr7 (31-83)||(39328938-39328990)
chr7 (194-270)||(40993206-40993282)
chr7 (114-157)||(5775172-5775215)
chr7 (233-268)||(48930795-48930830)
chr7 (105-143)||(21927826-21927864)
chr7 (105-142)||(14734030-14734067)
chr7 (105-162)||(25068042-25068098)
chr7 (108-152)||(11653842-11653886)
chr7 (200-264)||(27341606-27341670)
[»] chr8 (60 HSPs)
chr8 (105-270)||(3673401-3673566)
chr8 (108-268)||(18890665-18890832)
chr8 (110-270)||(5333391-5333554)
chr8 (105-270)||(10377649-10377814)
chr8 (105-270)||(23230603-23230768)
chr8 (107-270)||(17693578-17693741)
chr8 (105-264)||(37971243-37971402)
chr8 (105-270)||(1239361-1239528)
chr8 (105-270)||(40619037-40619202)
chr8 (109-270)||(45445775-45445936)
chr8 (106-270)||(16247187-16247351)
chr8 (105-264)||(28086783-28086942)
chr8 (24-262)||(5046636-5046870)
chr8 (105-270)||(7677247-7677412)
chr8 (105-270)||(20553205-20553370)
chr8 (105-270)||(20559708-20559873)
chr8 (105-270)||(20571270-20571435)
chr8 (105-262)||(28897669-28897826)
chr8 (105-270)||(1236661-1236828)
chr8 (105-270)||(7883205-7883370)
chr8 (105-270)||(14544867-14545032)
chr8 (105-262)||(27498337-27498493)
chr8 (108-270)||(39657410-39657579)
chr8 (105-270)||(40211266-40211431)
chr8 (109-270)||(8443475-8443639)
chr8 (132-265)||(29617243-29617379)
chr8 (104-270)||(14916151-14916320)
chr8 (105-270)||(25191029-25191196)
chr8 (183-270)||(14585715-14585802)
chr8 (159-270)||(33214635-33214746)
chr8 (108-262)||(34609793-34609953)
chr8 (109-270)||(471130-471291)
chr8 (198-270)||(15344361-15344433)
chr8 (198-270)||(15433426-15433498)
chr8 (198-270)||(15524730-15524802)
chr8 (132-264)||(24186631-24186762)
chr8 (194-262)||(31013580-31013648)
chr8 (131-243)||(36948428-36948540)
chr8 (198-270)||(42046274-42046346)
chr8 (108-269)||(24099215-24099384)
chr8 (108-253)||(20227262-20227409)
chr8 (108-270)||(41896473-41896642)
chr8 (108-259)||(8826172-8826325)
chr8 (148-264)||(33347491-33347606)
chr8 (132-262)||(9637381-9637511)
chr8 (197-264)||(16928727-16928794)
chr8 (108-269)||(3240340-3240504)
chr8 (105-263)||(27110436-27110594)
chr8 (185-270)||(43833960-43834044)
chr8 (226-270)||(7198159-7198203)
chr8 (109-157)||(14585663-14585711)
chr8 (182-264)||(44091726-44091805)
chr8 (108-143)||(5917722-5917757)
chr8 (182-257)||(26469123-26469198)
chr8 (105-211)||(26469231-26469340)
chr8 (105-151)||(16937311-16937357)
chr8 (188-270)||(29939343-29939425)
chr8 (199-244)||(8918321-8918366)
chr8 (200-265)||(24853919-24853984)
chr8 (182-270)||(21237827-21237915)
[»] chr5 (43 HSPs)
chr5 (105-270)||(13007186-13007351)
chr5 (105-270)||(38597754-38597919)
chr5 (105-262)||(13421890-13422047)
chr5 (105-270)||(35850756-35850921)
chr5 (105-270)||(38007315-38007480)
chr5 (105-269)||(31391720-31391884)
chr5 (105-270)||(9113691-9113856)
chr5 (105-270)||(14726427-14726592)
chr5 (108-270)||(28540872-28541041)
chr5 (108-270)||(2979272-2979441)
chr5 (105-270)||(6012104-6012269)
chr5 (105-262)||(25980115-25980272)
chr5 (182-270)||(41630536-41630624)
chr5 (105-264)||(11073872-11074031)
chr5 (105-244)||(26825387-26825526)
chr5 (108-270)||(14211180-14211349)
chr5 (105-264)||(24229756-24229915)
chr5 (124-270)||(10722737-10722883)
chr5 (122-268)||(37986081-37986227)
chr5 (105-264)||(7036176-7036335)
chr5 (183-270)||(15571521-15571608)
chr5 (159-270)||(26878074-26878185)
chr5 (148-270)||(34945393-34945515)
chr5 (105-262)||(6216856-6217012)
chr5 (108-270)||(19103433-19103602)
chr5 (119-270)||(7930148-7930299)
chr5 (108-270)||(35920962-35921127)
chr5 (117-265)||(8088183-8088333)
chr5 (181-262)||(9590945-9591026)
chr5 (105-263)||(11976908-11977066)
chr5 (105-233)||(11867625-11867753)
chr5 (107-261)||(8096472-8096626)
chr5 (199-268)||(39567321-39567390)
chr5 (27-83)||(38007243-38007299)
chr5 (183-264)||(1409533-1409614)
chr5 (105-170)||(14082439-14082504)
chr5 (105-143)||(22397528-22397566)
chr5 (105-143)||(28386892-28386930)
chr5 (108-169)||(39567255-39567319)
chr5 (124-268)||(19120886-19121032)
chr5 (106-143)||(20270811-20270848)
chr5 (182-243)||(31315942-31316003)
chr5 (182-243)||(41749360-41749421)
[»] chr2 (67 HSPs)
chr2 (105-270)||(1415525-1415690)
chr2 (111-264)||(30400008-30400161)
chr2 (105-270)||(4904112-4904277)
chr2 (105-270)||(33923673-33923838)
chr2 (105-263)||(35220293-35220451)
chr2 (32-252)||(4264375-4264587)
chr2 (105-270)||(38445134-38445299)
chr2 (107-270)||(7646443-7646611)
chr2 (105-264)||(36943094-36943253)
chr2 (105-270)||(7448215-7448380)
chr2 (105-249)||(12554169-12554313)
chr2 (107-270)||(19028881-19029044)
chr2 (108-270)||(10237183-10237352)
chr2 (105-270)||(18763436-18763601)
chr2 (105-264)||(7677846-7678005)
chr2 (108-270)||(29574595-29574760)
chr2 (105-264)||(37876579-37876738)
chr2 (109-263)||(27097380-27097534)
chr2 (109-263)||(31210581-31210735)
chr2 (105-270)||(32448586-32448753)
chr2 (108-270)||(3308909-3309078)
chr2 (109-270)||(4778725-4778886)
chr2 (113-270)||(17151399-17151556)
chr2 (131-264)||(25509041-25509174)
chr2 (105-270)||(31128747-31128912)
chr2 (105-264)||(19062325-19062484)
chr2 (105-264)||(29173693-29173851)
chr2 (105-269)||(11985201-11985362)
chr2 (105-268)||(14955490-14955660)
chr2 (105-270)||(1421644-1421809)
chr2 (105-270)||(8809248-8809413)
chr2 (105-264)||(42698674-42698832)
chr2 (105-270)||(9169225-9169390)
chr2 (105-269)||(5427837-5428000)
chr2 (152-268)||(28871757-28871873)
chr2 (108-259)||(6358849-6359005)
chr2 (105-264)||(31788425-31788583)
chr2 (108-270)||(10929632-10929798)
chr2 (108-264)||(36691845-36692001)
chr2 (108-256)||(43397100-43397248)
chr2 (105-264)||(29279543-29279702)
chr2 (111-259)||(34128662-34128813)
chr2 (105-205)||(4099071-4099171)
chr2 (158-270)||(11812704-11812816)
chr2 (194-270)||(33585702-33585778)
chr2 (194-270)||(41694678-41694754)
chr2 (105-264)||(4041567-4041726)
chr2 (182-265)||(33760165-33760248)
chr2 (105-238)||(19597844-19597980)
chr2 (198-270)||(17249114-17249186)
chr2 (182-270)||(24461488-24461576)
chr2 (105-264)||(39310825-39310984)
chr2 (158-265)||(41327524-41327631)
chr2 (216-270)||(12677417-12677471)
chr2 (25-83)||(18107883-18107941)
chr2 (182-256)||(23933600-23933674)
chr2 (198-260)||(37416771-37416833)
chr2 (185-238)||(14416208-14416261)
chr2 (32-93)||(28871898-28871959)
chr2 (198-268)||(14423386-14423456)
chr2 (197-263)||(16484658-16484724)
chr2 (182-256)||(36175477-36175551)
chr2 (105-154)||(3240865-3240914)
chr2 (107-168)||(36323839-36323900)
chr2 (228-264)||(26025364-26025400)
chr2 (31-75)||(33923603-33923647)
chr2 (27-83)||(43397266-43397322)
[»] chr1 (68 HSPs)
chr1 (105-270)||(5983797-5983962)
chr1 (105-264)||(1742242-1742401)
chr1 (105-270)||(34878244-34878409)
chr1 (105-270)||(10776427-10776592)
chr1 (105-270)||(14872601-14872765)
chr1 (105-270)||(23291608-23291773)
chr1 (105-257)||(7836775-7836927)
chr1 (105-270)||(31918949-31919114)
chr1 (105-270)||(44915600-44915765)
chr1 (105-264)||(35484363-35484522)
chr1 (105-270)||(21947584-21947749)
chr1 (105-270)||(45415519-45415684)
chr1 (108-270)||(48750142-48750311)
chr1 (108-270)||(47132864-47133029)
chr1 (105-270)||(16262819-16262987)
chr1 (105-270)||(49626872-49627039)
chr1 (105-264)||(3228233-3228389)
chr1 (105-270)||(7337629-7337794)
chr1 (105-270)||(21686834-21686999)
chr1 (106-270)||(24582910-24583076)
chr1 (105-246)||(27456501-27456642)
chr1 (105-270)||(8211877-8212041)
chr1 (105-262)||(27580102-27580259)
chr1 (105-262)||(32394959-32395116)
chr1 (105-229)||(940324-940448)
chr1 (108-256)||(16161795-16161950)
chr1 (25-263)||(18939209-18939438)
chr1 (124-268)||(36775678-36775829)
chr1 (108-270)||(34413058-34413225)
chr1 (105-258)||(41994385-41994541)
chr1 (105-270)||(44543231-44543398)
chr1 (177-270)||(37720115-37720208)
chr1 (25-93)||(34479380-34479448)
chr1 (194-270)||(45789591-45789667)
chr1 (184-262)||(51916639-51916715)
chr1 (198-259)||(6217804-6217865)
chr1 (25-93)||(31317639-31317707)
chr1 (118-244)||(12635141-12635270)
chr1 (182-268)||(32873832-32873918)
chr1 (198-264)||(39888236-39888302)
chr1 (214-263)||(15431639-15431688)
chr1 (105-269)||(19060868-19061034)
chr1 (105-234)||(50377289-50377418)
chr1 (210-270)||(24597290-24597350)
chr1 (182-270)||(43412412-43412500)
chr1 (198-270)||(49504561-49504633)
chr1 (109-263)||(13144785-13144939)
chr1 (108-218)||(15434893-15435003)
chr1 (105-151)||(27469680-27469726)
chr1 (210-263)||(25564064-25564117)
chr1 (105-222)||(31984139-31984251)
chr1 (108-157)||(32679177-32679226)
chr1 (25-70)||(45789452-45789497)
chr1 (107-143)||(15492259-15492295)
chr1 (228-267)||(3871499-3871538)
chr1 (183-270)||(29738630-29738717)
chr1 (184-270)||(1602130-1602215)
chr1 (105-143)||(11121072-11121110)
chr1 (105-155)||(35462118-35462168)
chr1 (105-142)||(4396949-4396986)
chr1 (105-222)||(11462462-11462579)
chr1 (108-169)||(15836156-15836217)
chr1 (198-243)||(34528784-34528829)
chr1 (194-243)||(36894262-36894311)
chr1 (105-170)||(39888153-39888218)
chr1 (105-142)||(40488378-40488415)
chr1 (31-83)||(34878417-34878469)
chr1 (214-270)||(35462015-35462071)
[»] chr3 (78 HSPs)
chr3 (107-270)||(19339135-19339298)
chr3 (105-270)||(47042014-47042180)
chr3 (105-264)||(38545756-38545915)
chr3 (105-270)||(9998424-9998589)
chr3 (105-268)||(10233027-10233190)
chr3 (105-264)||(12050620-12050779)
chr3 (105-263)||(12149757-12149915)
chr3 (105-270)||(6954662-6954827)
chr3 (105-270)||(10229433-10229598)
chr3 (105-270)||(21533775-21533940)
chr3 (105-267)||(10108193-10108355)
chr3 (105-263)||(36461404-36461562)
chr3 (105-270)||(53807824-53807991)
chr3 (108-269)||(8914665-8914833)
chr3 (108-268)||(12947242-12947405)
chr3 (105-270)||(18010977-18011142)
chr3 (105-270)||(21289780-21289952)
chr3 (104-264)||(43016811-43016971)
chr3 (105-270)||(48199739-48199899)
chr3 (105-264)||(23799882-23800041)
chr3 (105-270)||(32701450-32701613)
chr3 (111-264)||(35175364-35175520)
chr3 (105-262)||(20464944-20465101)
chr3 (105-270)||(20608865-20609030)
chr3 (108-265)||(41818169-41818332)
chr3 (105-270)||(43488556-43488721)
chr3 (105-270)||(45568411-45568576)
chr3 (105-270)||(53099747-53099912)
chr3 (105-238)||(1649374-1649509)
chr3 (105-263)||(35864905-35865063)
chr3 (105-270)||(40487282-40487447)
chr3 (105-263)||(48650707-48650865)
chr3 (108-264)||(29239300-29239459)
chr3 (105-270)||(52923083-52923248)
chr3 (131-270)||(33579863-33580002)
chr3 (108-270)||(42460706-42460871)
chr3 (105-270)||(14859447-14859612)
chr3 (108-270)||(16235379-16235548)
chr3 (159-264)||(45424809-45424914)
chr3 (105-270)||(47896109-47896274)
chr3 (108-270)||(51303609-51303778)
chr3 (108-270)||(51923680-51923849)
chr3 (107-270)||(40556671-40556824)
chr3 (182-270)||(46304486-46304574)
chr3 (108-270)||(7546567-7546737)
chr3 (105-264)||(38860086-38860251)
chr3 (105-270)||(54148948-54149113)
chr3 (121-264)||(26716079-26716226)
chr3 (108-270)||(53508182-53508348)
chr3 (107-228)||(46220639-46220750)
chr3 (105-270)||(9797500-9797660)
chr3 (108-270)||(27706192-27706361)
chr3 (108-268)||(29922014-29922177)
chr3 (108-268)||(29971167-29971330)
chr3 (182-270)||(21431647-21431735)
chr3 (105-233)||(44959955-44960083)
chr3 (104-270)||(628889-629045)
chr3 (105-263)||(20987772-20987930)
chr3 (105-270)||(31271775-31271938)
chr3 (182-255)||(7887424-7887497)
chr3 (182-255)||(21313070-21313143)
chr3 (109-192)||(25842634-25842720)
chr3 (183-262)||(26275793-26275872)
chr3 (153-264)||(45425597-45425708)
chr3 (105-143)||(27856137-27856175)
chr3 (214-270)||(7448880-7448936)
chr3 (214-270)||(7457022-7457078)
chr3 (194-246)||(32246493-32246545)
chr3 (182-270)||(50194301-50194389)
chr3 (108-245)||(51487063-51487207)
chr3 (108-143)||(4019694-4019729)
chr3 (218-264)||(19619784-19619830)
chr3 (182-224)||(26446944-26446986)
chr3 (105-143)||(53426894-53426932)
chr3 (105-162)||(21431582-21431639)
chr3 (213-270)||(27066019-27066076)
chr3 (105-233)||(36910643-36910771)
chr3 (194-238)||(27856210-27856254)
[»] scaffold0445 (1 HSPs)
scaffold0445 (105-270)||(1302-1467)
[»] chr6 (48 HSPs)
chr6 (105-270)||(23128577-23128742)
chr6 (105-270)||(33053134-33053299)
chr6 (105-264)||(606163-606322)
chr6 (105-263)||(30608488-30608646)
chr6 (109-270)||(3355080-3355241)
chr6 (105-270)||(34018519-34018684)
chr6 (105-262)||(127629-127785)
chr6 (105-270)||(3913540-3913705)
chr6 (105-270)||(7515168-7515333)
chr6 (108-269)||(14801782-14801950)
chr6 (105-270)||(29319844-29320009)
chr6 (108-270)||(30493491-30493656)
chr6 (105-264)||(67973-68132)
chr6 (108-268)||(8102681-8102848)
chr6 (105-270)||(32327183-32327348)
chr6 (107-270)||(26588438-26588604)
chr6 (182-270)||(30894636-30894724)
chr6 (108-262)||(528324-528481)
chr6 (108-270)||(545985-546155)
chr6 (182-264)||(29255418-29255500)
chr6 (109-244)||(11321461-11321596)
chr6 (108-270)||(1523363-1523532)
chr6 (152-270)||(12170474-12170592)
chr6 (182-270)||(24227698-24227786)
chr6 (108-252)||(31575491-31575638)
chr6 (105-169)||(32059868-32059932)
chr6 (105-248)||(13546652-13546794)
chr6 (105-152)||(31852272-31852319)
chr6 (108-157)||(30776627-30776676)
chr6 (178-263)||(33184757-33184842)
chr6 (183-270)||(4010478-4010564)
chr6 (120-245)||(22571445-22571574)
chr6 (105-259)||(34185670-34185827)
chr6 (108-264)||(1933664-1933824)
chr6 (108-162)||(7976254-7976308)
chr6 (122-270)||(31296793-31296944)
chr6 (25-73)||(20220794-20220842)
chr6 (25-73)||(22114778-22114826)
chr6 (105-264)||(28981133-28981295)
chr6 (105-259)||(25092434-25092591)
chr6 (112-262)||(6957116-6957266)
chr6 (228-270)||(33543570-33543612)
chr6 (120-169)||(20220852-20220901)
chr6 (197-262)||(20225902-20225967)
chr6 (120-169)||(22114836-22114885)
chr6 (197-262)||(22119886-22119951)
chr6 (228-264)||(17237240-17237276)
chr6 (198-270)||(31852159-31852231)
[»] chr4 (66 HSPs)
chr4 (105-270)||(22611161-22611326)
chr4 (105-270)||(35348285-35348450)
chr4 (105-270)||(53444096-53444261)
chr4 (105-268)||(4142720-4142886)
chr4 (105-269)||(17949291-17949455)
chr4 (105-269)||(17953143-17953307)
chr4 (105-264)||(54021838-54021997)
chr4 (105-264)||(32766492-32766651)
chr4 (25-262)||(12199667-12199896)
chr4 (105-264)||(8670463-8670622)
chr4 (105-263)||(56156615-56156773)
chr4 (105-270)||(56040612-56040777)
chr4 (105-263)||(9178331-9178489)
chr4 (105-270)||(21686208-21686372)
chr4 (108-270)||(27651918-27652087)
chr4 (109-246)||(52060913-52061050)
chr4 (105-270)||(53811006-53811171)
chr4 (105-270)||(2520755-2520922)
chr4 (105-264)||(13634093-13634252)
chr4 (105-270)||(26633637-26633802)
chr4 (105-270)||(43510175-43510339)
chr4 (105-270)||(33921029-33921197)
chr4 (108-270)||(52944289-52944454)
chr4 (105-270)||(19853478-19853643)
chr4 (185-270)||(21662495-21662580)
chr4 (185-270)||(21671259-21671344)
chr4 (112-264)||(10496320-10496472)
chr4 (108-259)||(51888188-51888342)
chr4 (109-264)||(24099039-24099194)
chr4 (108-270)||(31891253-31891422)
chr4 (124-269)||(1621472-1621620)
chr4 (108-270)||(6155192-6155356)
chr4 (108-264)||(22300827-22300986)
chr4 (108-265)||(33332540-33332702)
chr4 (105-270)||(28857377-28857545)
chr4 (105-263)||(37030239-37030397)
chr4 (108-269)||(36204346-36204516)
chr4 (105-238)||(44596642-44596773)
chr4 (105-254)||(11299976-11300122)
chr4 (132-270)||(22038768-22038909)
chr4 (108-244)||(36194683-36194826)
chr4 (105-264)||(38166202-38166359)
chr4 (111-244)||(9643369-9643505)
chr4 (105-259)||(10258873-10259027)
chr4 (105-270)||(43095606-43095771)
chr4 (182-270)||(18935837-18935925)
chr4 (105-169)||(29120430-29120494)
chr4 (214-270)||(47320378-47320434)
chr4 (112-156)||(49072808-49072852)
chr4 (113-263)||(48351159-48351310)
chr4 (107-245)||(5119319-5119456)
chr4 (198-259)||(2069557-2069618)
chr4 (182-259)||(26090891-26090968)
chr4 (184-252)||(4937890-4937958)
chr4 (107-243)||(40066048-40066184)
chr4 (117-259)||(9048652-9048796)
chr4 (184-263)||(9713969-9714048)
chr4 (106-153)||(35395756-35395803)
chr4 (105-143)||(38434695-38434733)
chr4 (194-262)||(31359720-31359789)
chr4 (217-270)||(42032494-42032547)
chr4 (31-83)||(18935697-18935749)
chr4 (228-264)||(25273982-25274018)
chr4 (118-154)||(37683878-37683914)
chr4 (224-264)||(45418609-45418649)
chr4 (105-157)||(47320473-47320525)
[»] scaffold0136 (2 HSPs)
scaffold0136 (105-268)||(10010-10173)
scaffold0136 (148-253)||(38054-38159)
[»] scaffold0026 (1 HSPs)
scaffold0026 (105-270)||(71830-71995)
[»] scaffold0634 (1 HSPs)
scaffold0634 (105-263)||(8470-8628)
[»] scaffold0603 (1 HSPs)
scaffold0603 (25-270)||(7601-7839)
[»] scaffold0347 (1 HSPs)
scaffold0347 (107-270)||(5987-6153)
[»] scaffold0888 (1 HSPs)
scaffold0888 (108-268)||(1646-1813)
[»] scaffold0017 (1 HSPs)
scaffold0017 (105-263)||(32720-32878)
[»] scaffold0127 (1 HSPs)
scaffold0127 (105-270)||(15449-15615)
[»] scaffold0049 (1 HSPs)
scaffold0049 (105-270)||(71266-71431)
[»] scaffold0042 (1 HSPs)
scaffold0042 (105-270)||(92462-92630)
[»] scaffold0050 (1 HSPs)
scaffold0050 (105-270)||(66008-66173)
[»] scaffold0884 (1 HSPs)
scaffold0884 (105-264)||(1945-2104)
[»] scaffold0039 (1 HSPs)
scaffold0039 (109-268)||(93065-93228)
[»] scaffold0262 (1 HSPs)
scaffold0262 (105-270)||(1785-1950)
[»] scaffold0088 (1 HSPs)
scaffold0088 (159-270)||(50788-50899)
[»] scaffold0121 (1 HSPs)
scaffold0121 (189-270)||(31240-31321)
[»] scaffold0618 (1 HSPs)
scaffold0618 (182-264)||(8105-8184)
[»] scaffold0018 (1 HSPs)
scaffold0018 (105-151)||(137030-137076)
[»] scaffold0009 (1 HSPs)
scaffold0009 (201-270)||(58054-58123)


Alignment Details
Target: chr7 (Bit Score: 113; Significance: 3e-57; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 18 - 257
Target Start/End: Original strand, 22087192 - 22087429
Alignment:
Q  18 aatcacatgcatctttttcccctttcttttaatttaaattagtggatttcacacatatcaaattttacattttgtgcnnnnnnnnngtttgtgatttcgt 117  Q
    |||||| |||||||||||||||||||||| ||||||||| |||||  ||||||||||||||||| |||||||||||          |||||||||||| |    
T  22087192 aatcacgtgcatctttttcccctttctttcaatttaaataagtggtgttcacacatatcaaattctacattttgtg--ttttttttgtttgtgatttcat 22087289  T
Q  118 cgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaaatatcaacttcag 217  Q
    |||||| ||||||||||||||||| | |  |||||| || ||||||||||||||| ||| || |||||| |||| || |||||||||| |||||||||||    
T  22087290 cgtctgggtgcgacgttgtgttgtccgttgtcttgtacgatgtttgatttcgtgtcttgttgctgtgtttgtttgatacctattgaaagatcaacttcag 22087389  T
Q  218 tcaattacaaattcaatcaataatttgggtgtcaacgttg 257  Q
    ||||||||||||||||||||| | ||||||||||||||||    
T  22087390 tcaattacaaattcaatcaatgacttgggtgtcaacgttg 22087429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 105 - 270
Target Start/End: Complemental strand, 30756950 - 30756785
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||||||| |||||| ||||||||||||| || |||||||||| ||||||||||| ||||||  |  ||||| ||| | || ||||||||    
T  30756950 tttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgttttgtcgcggtgtttgttcagtttctattgaa 30756851  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    | ||| || |||||||||||||||||||| |||||||||||   |||||||||||||||| |||||    
T  30756850 agatctacatcagtcaattacaaattcaaccaataatttggacatcaacgttgcagatccggaagc 30756785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 105 - 270
Target Start/End: Complemental strand, 37837589 - 37837424
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    ||||||||||| || ||| |||||| ||||||||||||| || |||||||||| ||||||||| | || |||  |  ||||||||||| |||||||||||    
T  37837589 tttgtgatttcatcatctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgattttgcgtcttgtcgcggtgttcgtttagttcctattgaa 37837490  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    | ||| || |||||||||||||||||||| |||| ||||||| ||||||||||||||||| |||||    
T  37837489 agatcgacatcagtcaattacaaattcaaccaatgatttgggcgtcaacgttgcagatccggaagc 37837424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 105 - 269
Target Start/End: Original strand, 42978570 - 42978734
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||||||| |||||| ||||||||||||| || |||||||||| ||||||||||  |||||   |  ||||||||||| ||| |||||||    
T  42978570 tttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgatttctcgttttatcgcggtgttcgtttagttcttattgaa 42978669  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaag 269  Q
    | ||| || ||||||||| |||||||||| |||| ||||||| ||||||||||||||||| ||||    
T  42978670 agatcgacatcagtcaataacaaattcaaccaatgatttgggcgtcaacgttgcagatccggaag 42978734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 105 - 264
Target Start/End: Complemental strand, 39328921 - 39328762
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||||||| ||| || ||||||||||||| || |||||||||| ||||||||||| ||||||  |  ||||| ||||| |||||||||||    
T  39328921 tttgtgatttcgtcgtctaagtacggcgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgttttgtcgcggtgtttgtttatttcctattgaa 39328822  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatcc 264  Q
    | |||  | |||||||||||||||||||| |||| ||||||| |||||||||| ||||||    
T  39328821 agatcggcatcagtcaattacaaattcaaccaatgatttgggcgtcaacgttgaagatcc 39328762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 105 - 270
Target Start/End: Original strand, 19296830 - 19296995
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||||||| |||||| ||||||||||||| || |||||||||| |||||||||||  |||||  |  ||||| ||| | ||||| |||||    
T  19296830 tttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcattttgtcgcggtgtttgttcagttcctcttgaa 19296929  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    | ||| || |||||||||||||||||||| |||| ||||||  ||||||||||||||||| |||||    
T  19296930 agatctacatcagtcaattacaaattcaaccaatgatttggacgtcaacgttgcagatccggaagc 19296995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 105 - 262
Target Start/End: Complemental strand, 8001677 - 8001520
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||||||| |||||| |||| |||||||| || |||||||||| ||||||||||| || |||  || ||||| ||| | |||||||||||    
T  8001677 tttgtgatttcgtcgtctaagtgcggcgttttgttgttcgtcgtcttgtgcggcgtttgatttcgcgtcttgtcgtggtgtttgttcagttcctattgaa 8001578  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagat 262  Q
    | ||| || ||| |||||||||||||||| |||| ||||||  |||||||||||||||    
T  8001577 agatctacatcaatcaattacaaattcaagcaatgatttggacgtcaacgttgcagat 8001520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 105 - 270
Target Start/End: Complemental strand, 9450268 - 9450103
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||||||| |||| | ||||||||||||| || |||||||||| |||||||||||  |||||  |  ||||| ||| | |||||||||||    
T  9450268 tttgtgatttcgtcgtctaagtgtggcgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcattttgtcgcggtgtttgttcagttcctattgaa 9450169  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    | ||| || ||| |||||||||||||||| |||| ||||||  ||||||||||||||||| |||||    
T  9450168 agatctacatcaatcaattacaaattcaagcaatgatttggacgtcaacgttgcagatccggaagc 9450103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 105 - 270
Target Start/End: Original strand, 24770206 - 24770371
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||||||| ||||||  |||||||||||| || |||| ||||  |||||||||||||| |||  |  ||||||||||| ||| |||||||    
T  24770206 tttgtgatttcgtcgtctaagtgcggtgttgtgttgttcgtcgtcttatgcgacgtttgatttcgtgtcttgtcgcggtgttcgtttatttcttattgaa 24770305  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    | |||  | ||||||||| |||||||||| |||| ||||||| |||||||||| ||||||||||||    
T  24770306 agatcggcatcagtcaatcacaaattcaaccaatgatttgggcgtcaacgttgaagatccagaagc 24770371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 105 - 270
Target Start/End: Original strand, 46699995 - 46700160
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    ||||||| || |||||||  ||||||| ||||||||||| || |||| ||||| ||||||||||  || |||  || ||||||||||| |||||||||||    
T  46699995 tttgtgagtttgtcgtctaggtgcgacattgtgttgttcgtcgtcttctgcggcgtttgatttcacgtcttgtcgtggtgttcgtttagttcctattgaa 46700094  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    ||||| || |||||||| |||||||||||||||| |||||||  ||| |||||||||||| |||||    
T  46700095 atatcgacatcagtcaactacaaattcaatcaatgatttgggcatcagcgttgcagatccggaagc 46700160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 105 - 270
Target Start/End: Original strand, 47590271 - 47590436
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    ||||||||||||| |||| |||||| ||||||||||||| || |||||||||| ||||||||| | || |||  |  ||||| || ||||||||||||||    
T  47590271 tttgtgatttcgttgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgattttgcgtcttgccgcggtgtttgtataattcctattgaa 47590370  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    | ||| || || ||||||||||||||||| |||| ||||||| |||||||||||| |||| |||||    
T  47590371 agatctacatccgtcaattacaaattcaaccaatgatttgggcgtcaacgttgcacatccggaagc 47590436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 108 - 269
Target Start/End: Original strand, 28476183 - 28476351
Alignment:
Q  108 gtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcgg---tgtttgatttcg--tgttttggtgtt--gtgttcgtttaattcctat 200  Q
    ||||||||||||||| |||||||||||||||||||| || ||||||||||   ||||||||||||  | ||||| |||   ||||||||||  ||| |||    
T  28476183 gtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtcttgtgcggcgttgtttgatttcgcatcttttgttgtgcggtgttcgtttggttcgtat 28476282  T
Q  201 tgaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaag 269  Q
    ||||| |||| |||||| |||| ||||||||| ||||| ||||||| ||||||||||||||||||||||    
T  28476283 tgaaagatcagcttcagacaatcacaaattcattcaatgatttgggcgtcaacgttgcagatccagaag 28476351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 105 - 259
Target Start/End: Complemental strand, 34899738 - 34899584
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||||||| |||||| ||||||||||||| || |||||||||| |||||||||||  |||||  |  ||||| ||| | ||||| |||||    
T  34899738 tttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgctttttgtcgcggtgtttgttcagttcctcttgaa 34899639  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgca 259  Q
    | ||| || |||||||||||||||||||| |||| ||||||  ||||||||||||    
T  34899638 agatctacatcagtcaattacaaattcaaccaatgatttggacgtcaacgttgca 34899584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 105 - 262
Target Start/End: Complemental strand, 5348723 - 5348566
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||||||||||||| || ||||||||||| |  | ||||||||||||||||||   || ||  ||  ||||||||||  |||||||||||    
T  5348723 tttgtgatttcgtcgtctgagtgcaacattgtgttgttcgttgttttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttggttcctattgaa 5348624  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagat 262  Q
    | ||||| |||| ||||||||| ||||||||||| ||||||| ||| |||||||||||    
T  5348623 agatcaatttcaatcaattacagattcaatcaatgatttgggcgtcgacgttgcagat 5348566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 111 - 270
Target Start/End: Original strand, 38798747 - 38798906
Alignment:
Q  111 atttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaaatatca 210  Q
    |||| ||||||| ||| |||||||||||||||| || |||||||||| ||||||||| | ||||||  |  ||||| ||||| |||||||||||| |||     
T  38798747 attttgtcgtctaagtacgacgttgtgttgttcgtcgtcttgtgcggcgtttgattttgcgttttgtcgcagtgtttgtttatttcctattgaaagatcg 38798846  T
Q  211 acttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
     | |||||||||||||||||||| |||| ||||||| |||||| ||| |||||| |||||    
T  38798847 gcatcagtcaattacaaattcaaccaatgatttgggcgtcaacattgaagatccggaagc 38798906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 108 - 270
Target Start/End: Complemental strand, 24350972 - 24350805
Alignment:
Q  108 gtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcgg---tgtttgatttcg--tgttttggtgtt--gtgttcgtttaattcctat 200  Q
    ||||||||||||||| |||||||||||||||||||| || ||||||||||   |||||||||||   | ||||| |||   ||||||||||  ||| |||    
T  24350972 gtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtcttgtgcggcgttgtttgatttcacattttttgttgtgcagtgttcgtttggttcgtat 24350873  T
Q  201 tgaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    ||||| |||| |||||  |||| ||||||||||||||| ||||||| |||||||||||||||||||||||    
T  24350872 tgaaagatcagcttca--caatcacaaattcaatcaatgatttgggcgtcaacgttgcagatccagaagc 24350805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 108 - 270
Target Start/End: Original strand, 35132903 - 35133072
Alignment:
Q  108 gtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcgg---tgtttgatttcgtgt----tttggtgttgtgttcgtttaattcctat 200  Q
    ||||||||||||||| |||||||||||||||||||| || |||||| |||   |||||||||||   |    | | |||| ||||||||||  ||| |||    
T  35132903 gtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtcttgttcggcgttgtttgatttcacatcctttattgtgtggtgttcgtttggttcgtat 35133002  T
Q  201 tgaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    ||||| ||||||||||| |||| ||||||||||||||| ||||||| |||||||||||||||||| ||||    
T  35133003 tgaaagatcaacttcagacaatcacaaattcaatcaatgatttgggcgtcaacgttgcagatccaaaagc 35133072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 105 - 270
Target Start/End: Complemental strand, 12141439 - 12141274
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||||||| |||||| |||| |||||||  || ||||||||||  |||||||||| || |||     ||||| ||||| ||||||||| |    
T  12141439 tttgtgatttcgtcgtctaagtgcggcgttttgttgtttgtcgtcttgtgcggcatttgatttcgcgtcttgtcacggtgtttgtttagttcctattgga 12141340  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    | ||| || |||||||||||||||||||| |||| ||||||  ||||||||||||||||| |||||    
T  12141339 agatctacatcagtcaattacaaattcaaccaatgatttggacgtcaacgttgcagatccggaagc 12141274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 105 - 270
Target Start/End: Complemental strand, 48316943 - 48316778
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||||||| ||| || ||||||||||||| || |||||||| | ||||||||||| || |||  |  ||||| ||| | |||||||||||    
T  48316943 tttgtgatttcgtcgtctaagtacggcgttgtgttgttcgtcgtcttgtgcagcgtttgatttcgcgtcttgtcgcggtgtttgttcagttcctattgaa 48316844  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    | ||| || ||| |||||||||||||||| |||| ||||||  ||||||| ||||||||| |||||    
T  48316843 agatctacatcaatcaattacaaattcaagcaatgatttggacgtcaacgctgcagatccggaagc 48316778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 105 - 256
Target Start/End: Complemental strand, 9977337 - 9977186
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||||||| |||||  |||||| |||||| || ||||||  || ||||||||||| || |||  |  ||| || |||| |||||||||||    
T  9977337 tttgtgatttcgtcgtctaagtgcagcgttgtattgttcgtcgtcttgtttggcgtttgatttcgcgtcttgtcgcggtgctcatttagttcctattgaa 9977238  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgtt 256  Q
    | ||| ||||||||||||||||||||||| |||| ||||||| |||||||||    
T  9977237 agatcgacttcagtcaattacaaattcaaacaatgatttgggcgtcaacgtt 9977186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 105 - 263
Target Start/End: Original strand, 39228975 - 39229132
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    ||||||||||||| |||||||||||  |||||||||||| || |||||||||| ||| ||||||| || ||| |||  || ||||||  || ||||||||    
T  39228975 tttgtgatttcgttgtctgagtgcgttgttgtgttgttcgtcgtcttgtgcggcgttagatttcgcgtcttgttgtgatg-tcgtttggtttctattgaa 39229073  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatc 263  Q
    | |||||||||||||||||||| |||||| | || | ||||| ||| ||||||||||||    
T  39229074 agatcaacttcagtcaattacagattcaaccgatgacttgggcgtcgacgttgcagatc 39229132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 108 - 263
Target Start/End: Complemental strand, 38880709 - 38880551
Alignment:
Q  108 gtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcgg---tgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    ||||||||||||| |||||||||||||||||||||   | |||||| ||    |||||||||| |  | ||| ||  ||||||||||  ||| |||||||    
T  38880709 gtgatttcgtcgtatgagtgcgacgttgtgttgtttgccgtcttgtacgacgctgtttgattttgcatcttgttgcggtgttcgtttggttcttattgaa 38880610  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatc 263  Q
    | |||| ||||||||||| ||||||||||||||| ||||||||| ||||||||||||||    
T  38880609 agatcagcttcagtcaatcacaaattcaatcaatgatttgggtgccaacgttgcagatc 38880551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 107 - 263
Target Start/End: Complemental strand, 45349928 - 45349772
Alignment:
Q  107 tgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaaat 206  Q
    |||||||||||||||| |||| | ||||||||||||| || | ||||| || ||||||||||| || |||  |  ||||||||||| ||||||||||||     
T  45349928 tgtgatttcgtcgtctaagtgtggcgttgtgttgttcgtcgttttgtgtggcgtttgatttcgcgtcttgtcgcggtgttcgtttagttcctattgaaag 45349829  T
Q  207 atcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatc 263  Q
    ||   | |||||||||||||||||||| |||| |||| || |||||| |||||||||    
T  45349828 attggcatcagtcaattacaaattcaagcaatgattttggcgtcaacattgcagatc 45349772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 108 - 270
Target Start/End: Original strand, 22742900 - 22743069
Alignment:
Q  108 gtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcgg---tgtttgatttcgtgttttg----gtgttgtgttcgtttaattcctat 200  Q
    ||||||||||||||| ||| |||||||||||||||| || ||||||||||   |||||||||||   ||||     |||  | ||||||||  ||| |||    
T  22742900 gtgatttcgtcgtcttagttcgacgttgtgttgttcgtcgtcttgtgcggcgttgtttgatttcacatttttagttgtgcggcgttcgtttggttcgtat 22742999  T
Q  201 tgaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    ||||| |||| |||||| |||| ||||||||||||||| ||||| | |||||||||||||||||||||||    
T  22743000 tgaaagatcagcttcagccaatcacaaattcaatcaatgatttgagcgtcaacgttgcagatccagaagc 22743069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 25 - 270
Target Start/End: Original strand, 25255124 - 25255352
Alignment:
Q  25 tgcatctttttcccctttcttttaatttaaattagtggatttcacacatatcaaattttacattttgtgcnnnnnnnnngtttgtgatttcgtcgtctga 124  Q
    |||||||||||||||||||||| ||||||||| ||| | |||||||||||||| |||||||||||||||                 ||||  ||||||||    
T  25255124 tgcatctttttcccctttctttcaatttaaataagttgttttcacacatatcacattttacattttgtgat---------------attt--tcgtctga 25255206  T
Q  125 gtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaaatatcaacttcagtcaatta 224  Q
    ||||| ||||||||| |||  | |||||||| | |||||||||| ||| | | ||  |||||| |||| ||||||| ||||| ||||||||| |||||||    
T  25255207 gtgcggcgttgtgttattcgccgtcttgtgcagcgtttgatttcatgtctcgttgcggtgttcatttagttcctatcgaaatgtcaacttcaatcaatta 25255306  T
Q  225 caaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
     | ||||||||||| |||||||  || | ||||||||||| |||||    
T  25255307 tagattcaatcaattatttgggcatcgatgttgcagatcctgaagc 25255352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 108 - 264
Target Start/End: Complemental strand, 41553565 - 41553406
Alignment:
Q  108 gtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtg---cggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||| |||||||| |||||||||||||| || |||||||   || | |||||||||| || ||| | | ||||||||||  ||| |||||||    
T  41553565 gtgatttcgtcgcctgagtgcaacgttgtgttgttcgtcgtcttgtgtgacgttatttgatttcgcgtcttgttatggtgttcgtttggttcatattgaa 41553466  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatcc 264  Q
    | ||||| |||||||||| ||| ||||| | ||| ||||||  |||||||||||||||||    
T  41553465 agatcaatttcagtcaatcacatattcagttaatgatttggacgtcaacgttgcagatcc 41553406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 108 - 264
Target Start/End: Complemental strand, 41553910 - 41553751
Alignment:
Q  108 gtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtg---cggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||| |||||||| |||||||||||||| || |||||||   || | |||||||||| || ||| | | ||||||||||  ||| |||||||    
T  41553910 gtgatttcgtcgcctgagtgcaacgttgtgttgttcgtcgtcttgtgtgacgttatttgatttcgcgtcttgttatggtgttcgtttggttcatattgaa 41553811  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatcc 264  Q
    | ||||| |||||||||| ||| ||||| | ||| ||||||  |||||||||||||||||    
T  41553810 agatcaatttcagtcaatcacatattcagttaatgatttggacgtcaacgttgcagatcc 41553751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 108 - 264
Target Start/End: Complemental strand, 41554255 - 41554096
Alignment:
Q  108 gtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtg---cggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||| |||||||| |||||||||||||| || |||||||   || | |||||||||| || ||| | | ||||||||||  ||| |||||||    
T  41554255 gtgatttcgtcgcctgagtgcaacgttgtgttgttcgtcgtcttgtgtgacgttatttgatttcgcgtcttgttatggtgttcgtttggttcatattgaa 41554156  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatcc 264  Q
    ||||||| |||||||||| ||| ||||| | ||| ||||||  |||||||||||| ||||    
T  41554155 atatcaatttcagtcaatcacatattcagttaatgatttggacgtcaacgttgcatatcc 41554096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 105 - 264
Target Start/End: Original strand, 48061382 - 48061541
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||||||| |||||| | || |||||||| || |||| ||||  ||||||||| | || |||  |  ||||| ||||| |||||||||||    
T  48061382 tttgtgatttcgtcgtctaagtgcggcattttgttgttcgtcgtcttatgcgacgtttgattttgcgtcttgtcgcggtgtttgtttagttcctattgaa 48061481  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatcc 264  Q
    | ||| || | |||||||||||||||||| ||||  |||| | |||||||||||||||||    
T  48061482 agatctacattagtcaattacaaattcaaccaatggtttgagcgtcaacgttgcagatcc 48061541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 28 - 234
Target Start/End: Complemental strand, 26623990 - 26623791
Alignment:
Q  28 atctttttcccctttcttttaatttaaattagtggatttcacacatatcaaattttacattttgtgcnnnnnnnnngtttgtgatttcgtcgtctgagtg 127  Q
    |||||||| |||||||||| ||||||||| ||| | || |||||||||||| |||| |||||| ||           ||||||||||| |||||||||||    
T  26623990 atcttttttccctttctttcaatttaaataagttgtttacacacatatcaagtttttcattttatgttt--------tttgtgatttcatcgtctgagtg 26623899  T
Q  128 cgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaaatatcaacttca-gtcaattaca 226  Q
    || ||||||||||||| || |||||| ||| ||||||||| |  | ||| ||  ||||| ||||  |||||||||||| |||||||||| ||||||| ||    
T  26623898 cggcgttgtgttgttcgtcgtcttgtacggcgtttgattttgcatcttgttgcggtgtttgtttggttcctattgaaagatcaacttcaggtcaattgca 26623799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 132 - 263
Target Start/End: Original strand, 5792783 - 5792914
Alignment:
Q  132 gttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaaatatcaacttcagtcaattacaaattc 231  Q
    |||||||||||  || |||||||||  ||||||||||| || |||     ||||||||||| |||||||||||| ||| || |||||||||||||| ||     
T  5792783 gttgtgttgttagtcatcttgtgcgacgtttgatttcgcgtcttgtcacagtgttcgtttagttcctattgaaagatcgacatcagtcaattacaagtta 5792882  T
Q  232 aatcaataatttgggtgtcaacgttgcagatc 263  Q
    ||||||| ||||||  ||||||||||||||||    
T  5792883 aatcaatgatttggacgtcaacgttgcagatc 5792914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 108 - 270
Target Start/End: Complemental strand, 24069525 - 24069360
Alignment:
Q  108 gtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgttt---gatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||| ||||||||||||| ||||||||||||| |  |||||||||| ||||   ||||| | || ||| ||  |||||||||| |||| |||||||    
T  24069525 gtgatttcatcgtctgagtgcggcgttgtgttgttcgttgtcttgtgcggcgttttttgatttggcgtattgttgcggtgttcgtttgattcatattgaa 24069426  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    |||||| ||||  ||||| |||  |||||||||| |||||   |||||||||||||| || |||||    
T  24069425 atatcagcttcgatcaatcacaggttcaatcaatgatttgaacgtcaacgttgcagacccggaagc 24069360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 109 - 270
Target Start/End: Complemental strand, 13797059 - 13796895
Alignment:
Q  109 tgatttcgtcgtctgagtgcgacgttgtgttgttcatcct---cttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaaa 205  Q
    |||||||||||||| |||||| ||||||||||||| |  |   ||||||||  |||||||||||||| |||     ||||||||||| ||| ||||||||    
T  13797059 tgatttcgtcgtctaagtgcggcgttgtgttgttcgttgtgatcttgtgcgacgtttgatttcgtgtcttgtctcggtgttcgtttagttcatattgaaa 13796960  T
Q  206 tatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
     ||| || ||||||||| ||||| |||| |||| |||||   ||||||||||||||||| |||||    
T  13796959 gatcgacatcagtcaataacaaagtcaaccaatgatttgaccgtcaacgttgcagatccggaagc 13796895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 108 - 270
Target Start/End: Complemental strand, 19404885 - 19404723
Alignment:
Q  108 gtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaaata 207  Q
    ||||||||||||||| |||||| |||| | |||||| || ||||||||   ||||||||| |  | |||  |  |||||| |||| ||||| |||||| |    
T  19404885 gtgatttcgtcgtctaagtgcggcgttctattgttcgtcgtcttgtgcatcgtttgattttgcatcttgtcgcggtgttcttttagttcctcttgaaaga 19404786  T
Q  208 tcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    |  || || |||||||||||||||||||||| ||||||| ||||| ||||||||||| |||||    
T  19404785 ttgacatctgtcaattacaaattcaatcaatgatttgggcgtcaatgttgcagatccggaagc 19404723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 108 - 243
Target Start/End: Complemental strand, 1749282 - 1749140
Alignment:
Q  108 gtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcgg---tgtttgatttcg--tgttttggtgt--tgtgttcgtttaattcctat 200  Q
    ||||||||||||||| |||||||||||||||||||| || ||||||||||   ||||||||||||  |  |||| |||    |||||||||  ||| |||    
T  1749282 gtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtcttgtgcggcattgtttgatttcgcatcctttgttgtacgatgttcgtttggttcgtat 1749183  T
Q  201 tgaaatatcaacttcagtcaattacaaattcaatcaataattt 243  Q
    ||||| |||| |||||| |||| ||||||||||||||| ||||    
T  1749182 tgaaagatcagcttcagacaatcacaaattcaatcaatgattt 1749140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 105 - 163
Target Start/End: Original strand, 40993142 - 40993200
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttg 163  Q
    |||||||||||||||||| |||||| ||||||||||||| || ||||||||||||||||    
T  40993142 tttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcatcttgtgcggtgtttg 40993200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 108 - 253
Target Start/End: Complemental strand, 44311922 - 44311775
Alignment:
Q  108 gtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcgg---tgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||| ||||||||||||| |||||| |||||| || |||| ||||    |||||||||||   ||||| ||| || || ||||  || ||||| ||    
T  44311922 gtgatttcatcgtctgagtgcgtcgttgtattgttcgtcgtcttctgcgacgttgtttgatttcacattttgttgt-gtatttgtttggtttctattaaa 44311824  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaac 253  Q
    | |||  ||| ||||||||||||||||||||||||||||||||||||||    
T  44311823 agatcggcttaagtcaattacaaattcaatcaataatttgggtgtcaac 44311775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 24 - 93
Target Start/End: Complemental strand, 26610949 - 26610880
Alignment:
Q  24 atgcatctttttcccctttcttttaatttaaattagtggatttcacacatatcaaattttacattttgtg 93  Q
    ||||||||||||||||||||||| ||||||||| ||||| || |||| ||||||| |||| |||||||||    
T  26610949 atgcatctttttcccctttctttgaatttaaataagtggtttccacatatatcaagttttccattttgtg 26610880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 105 - 270
Target Start/End: Original strand, 4530037 - 4530201
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||||||| ||| ||  |||||||| ||| || | ||||| || ||||||||| | || ||| ||  ||||||  ||| || || |||||    
T  4530037 tttgtgatttcgtcgtctaagtacggtgttgtgttattcgtcat-ttgtgtggcgtttgattttgcgtcttgttgcggtgttcaattagttactgttgaa 4530135  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    | |||||||||||||| |||||||||||||| |  |||| || || ||||||| | ||||||||||    
T  4530136 agatcaacttcagtcagttacaaattcaatccaagatttaggcgtaaacgttggatatccagaagc 4530201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 198 - 263
Target Start/End: Complemental strand, 5000067 - 5000002
Alignment:
Q  198 tattgaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatc 263  Q
    |||| ||||||||| |||||||||||||||||||||||||| ||||||   |||||||||| ||||    
T  5000067 tattaaaatatcaatttcagtcaattacaaattcaatcaattatttggacttcaacgttgctgatc 5000002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 105 - 270
Target Start/End: Complemental strand, 39171721 - 39171556
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||| ||| |||||  |||| |||||||| || |||||||| | |||||||||   || |||      |||| ||| | |||| ||||||    
T  39171721 tttgtgatttcgtcatctaagtgctgcgttttgttgttcgtcgtcttgtgcagcgtttgattttacgtcttgtcacgatgtttgttcagttccaattgaa 39171622  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    | ||| || ||| |||||||||||||||| |||| ||||||  ||||||||||||||||| |||||    
T  39171621 agatctacatcaatcaattacaaattcaagcaatgatttggacgtcaacgttgcagatccggaagc 39171556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 105 - 262
Target Start/End: Original strand, 27997048 - 27997205
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtg---cggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctatt 201  Q
    ||||| ||||||||||||||||||| | ||||||||||| || |||||||   |  ||||| |||| |  | ||| ||  |||||||||| |||| ||||    
T  27997048 tttgttatttcgtcgtctgagtgcggcattgtgttgttcgtcatcttgtgcaacattgttttattttgcatcttgttgcagtgttcgtttgattcatatt 27997147  T
Q  202 gaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagat 262  Q
    |||| ||||||||   ||||||| ||||| | ||||| ||||||| || ||||||||||||    
T  27997148 gaaagatcaactt---tcaattataaattaagtcaatgatttgggcgtgaacgttgcagat 27997205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 108 - 243
Target Start/End: Original strand, 3394434 - 3394574
Alignment:
Q  108 gtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcgg---tgtttgatttc--gtgttttggtgttgtgttcgtttaattcctattg 202  Q
    |||||||| |||||||||||||  |||||||||||| || ||||||| ||   |||||||||||  |||| ||  ||  ||||| |||||  || |||||    
T  3394434 gtgatttcatcgtctgagtgcggtgttgtgttgttcgtcgtcttgtgtggtgttgtttgatttcgtgtgtcttcttgcggtgtttgtttagatcatattg 3394533  T
Q  203 aaatatcaacttcagtcaattacaaattcaatcaataattt 243  Q
    ||  |||||||||||||||| ||| ||||||||||| ||||    
T  3394534 aatgatcaacttcagtcaatcacatattcaatcaatgattt 3394574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 182 - 257
Target Start/End: Complemental strand, 24610224 - 24610149
Alignment:
Q  182 gtgttcgtttaattcctattgaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttg 257  Q
    ||||||||||| ||| |||| ||||||||  ||||||| || ||| ||||||||||| |||||||| |||||||||    
T  24610224 gtgttcgtttagttcatattaaaatatcagtttcagtcgatcacagattcaatcaatgatttgggtttcaacgttg 24610149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 198 - 264
Target Start/End: Original strand, 11343863 - 11343929
Alignment:
Q  198 tattgaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatcc 264  Q
    |||||||| || || |||||||||||||||||| ||| ||| ||||||  |||||||||||||||||    
T  11343863 tattgaaagattaaattcagtcaattacaaatttaattaatgatttggacgtcaacgttgcagatcc 11343929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 124 - 229
Target Start/End: Complemental strand, 3267324 - 3267219
Alignment:
Q  124 agtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaaatatcaacttcagtcaatt 223  Q
    |||||| |||| |||||||| || |||||||||  ||||||||||| || ||      ||||||||||||||| |||||||| ||| ||| |||||||||    
T  3267324 agtgcggcgttttgttgttcgtcgtcttgtgcgacgtttgatttcgcgtcttatcacggtgttcgtttaattcatattgaaagatcgactccagtcaatt 3267225  T
Q  224 acaaat 229  Q
    ||||||    
T  3267224 acaaat 3267219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 158 - 243
Target Start/End: Complemental strand, 29617778 - 29617693
Alignment:
Q  158 tgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaaatatcaacttcagtcaattacaaattcaatcaataattt 243  Q
    |||||||||||| || ||| ||| ||||| |||| |||| |||||||| |||||||| || |||||||| ||| ||||| ||||||    
T  29617778 tgtttgatttcgcgtcttgttgtagtgtttgtttgattcgtattgaaagatcaactttagacaattacagattaaatcagtaattt 29617693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 116 - 264
Target Start/End: Complemental strand, 32675510 - 32675360
Alignment:
Q  116 gtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcgg---tgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaaatatcaac 212  Q
    ||||| |||||||||||||||||||||| || | ||||| ||   | ||||||||| ||||||| ||| || |||||||  || ||||||||||||        
T  32675510 gtcgtttgagtgcgacgttgtgttgttcgtcattttgtgtggtactatttgatttcttgttttgttgtggtattcgtttggtttctattgaaatat-ggt 32675412  T
Q  213 ttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatcc 264  Q
    |||| ||||||||| |||| || ||| ||||| ||||||||| || ||||||    
T  32675411 ttcaatcaattacatattcgattaatgatttgagtgtcaacgatgtagatcc 32675360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 109 - 169
Target Start/End: Original strand, 48930730 - 48930793
Alignment:
Q  109 tgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcgg---tgtttgatttcg 169  Q
    |||||||||||||| |||||||||||||||| ||| || ||||||||||   ||||||||||||    
T  48930730 tgatttcgtcgtcttagtgcgacgttgtgttattcgtcgtcttgtgcggcgttgtttgatttcg 48930793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 83
Target Start/End: Complemental strand, 39328990 - 39328938
Alignment:
Q  31 tttttcccctttcttttaatttaaattagtggatttcacacatatcaaatttt 83  Q
    |||||||| ||||||| ||||||||| ||||| ||||||||||||||| ||||    
T  39328990 tttttcccttttctttcaatttaaataagtggttttcacacatatcaagtttt 39328938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 194 - 270
Target Start/End: Original strand, 40993206 - 40993282
Alignment:
Q  194 ttcctattgaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    |||||||||||| ||| || ||||||||||||||||||||  ||  |||||| | ||||||||||| || |||||||    
T  40993206 ttcctattgaaagatctacatcagtcaattacaaattcaacaaaagatttggatttcaacgttgcatattcagaagc 40993282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 114 - 157
Target Start/End: Original strand, 5775172 - 5775215
Alignment:
Q  114 tcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcgg 157  Q
    |||||||||||||||| |||||||||||||||| |||| |||||    
T  5775172 tcgtcgtctgagtgcggcgttgtgttgttcatcgtcttatgcgg 5775215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 233 - 268
Target Start/End: Original strand, 48930795 - 48930830
Alignment:
Q  233 atcaataatttgggtgtcaacgttgcagatccagaa 268  Q
    |||||| |||||||||||||||||||||||||||||    
T  48930795 atcaatgatttgggtgtcaacgttgcagatccagaa 48930830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 143
Target Start/End: Complemental strand, 21927864 - 21927826
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttc 143  Q
    ||||||||||| ||||||||||| |||||||||||||||    
T  21927864 tttgtgatttcatcgtctgagtgtgacgttgtgttgttc 21927826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 105 - 142
Target Start/End: Complemental strand, 14734067 - 14734030
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgtt 142  Q
    |||||||||||||||||| ||||||||||||| |||||    
T  14734067 tttgtgatttcgtcgtcttagtgcgacgttgttttgtt 14734030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 105 - 162
Target Start/End: Original strand, 25068042 - 25068098
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgttt 162  Q
    ||||||||||| || |||||||||| ||||||||||||| | | ||||||||||||||    
T  25068042 tttgtgatttcatcatctgagtgcggcgttgtgttgttcgt-cgcttgtgcggtgttt 25068098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 108 - 152
Target Start/End: Original strand, 11653842 - 11653886
Alignment:
Q  108 gtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttg 152  Q
    |||||||||||||||||||  ||||||||||||||| || |||||    
T  11653842 gtgatttcgtcgtctgagtatgacgttgtgttgttcgtcgtcttg 11653886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 264
Target Start/End: Original strand, 27341606 - 27341670
Alignment:
Q  200 ttgaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatcc 264  Q
    |||||| ||| | ||||| |||||||| ||||||||||||| | | ||||||| |||||||||||    
T  27341606 ttgaaagatctatttcagccaattacatattcaatcaataactcgagtgtcaatgttgcagatcc 27341670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 82; Significance: 9e-39; HSPs: 60)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 105 - 270
Target Start/End: Original strand, 3673401 - 3673566
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||||||| ||||||  |||||||||||| || |||| |||||||||||||||||||| ||| ||  |||||| |||| |||||||||||    
T  3673401 tttgtgatttcgtcgtctaagtgcggtgttgtgttgttcgtcgtcttatgcggtgtttgatttcgtgtcttgttgcggtgttcctttagttcctattgaa 3673500  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    | ||| || ||||||||||||||||  |||||||  |||||| ||||||||||||||||| |||||    
T  3673501 agatcgacatcagtcaattacaaatcaaatcaatgctttgggcgtcaacgttgcagatccggaagc 3673566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 108 - 268
Target Start/End: Complemental strand, 18890832 - 18890665
Alignment:
Q  108 gtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcgg---tgtttgatttcg--tgttttg--gtgttgtgttcgtttaattcctat 200  Q
    ||||||||||||||| |||||||||||||||||||| || |||||||||    ||||||||||||  | |||||  |||| ||||||||||  ||| |||    
T  18890832 gtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtcttgtgcgacgttgtttgatttcgcattttttgttgtgtggtgttcgtttggttcgtat 18890733  T
Q  201 tgaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaa 268  Q
    ||||| |||| |||||| |||| ||||||||||||||| ||||||| |||||||||||||||||||||    
T  18890732 tgaaagatcagcttcagacaatcacaaattcaatcaatgatttgggcgtcaacgttgcagatccagaa 18890665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 110 - 270
Target Start/End: Original strand, 5333391 - 5333554
Alignment:
Q  110 gatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtt---tgatttcgtgttttggtgttgtgttcgtttaattcctattgaaat 206  Q
    ||||||||| ||||||||||  |||||||||||| || ||||||||||||||   |||||| | || ||| |   ||||||||||  ||||||||||||     
T  5333391 gatttcgtcatctgagtgcggtgttgtgttgttcgtcgtcttgtgcggtgttgtttgattttgcgtcttgttccggtgttcgtttggttcctattgaaag 5333490  T
Q  207 atcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    |||||||||||||||| ||| ||||||||||| ||||||| |||||||||| ||||||||||||    
T  5333491 atcaacttcagtcaatcacatattcaatcaattatttgggcgtcaacgttgtagatccagaagc 5333554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 105 - 270
Target Start/End: Original strand, 10377649 - 10377814
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    ||||||||||||| |||| |||||| |||||||||||||  | |||||||||| ||||||||||| ||||||  || ||||| ||| | |||||||||||    
T  10377649 tttgtgatttcgttgtctaagtgcggcgttgtgttgttcgccgtcttgtgcggcgtttgatttcgcgttttgtcgtggtgtttgttcagttcctattgaa 10377748  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    | ||| || ||||||||||| |||||||| |||| ||||||   |||||||||||||||| |||||    
T  10377749 agatctacatcagtcaattataaattcaaccaatgatttggacatcaacgttgcagatccggaagc 10377814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 105 - 270
Target Start/End: Original strand, 23230603 - 23230768
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||||||| |||||| || | |||||||| || |||||||||| ||||||||||| || |||  |  ||||| ||||| ||||||||| |    
T  23230603 tttgtgatttcgtcgtctaagtgcggcgatttgttgttcgtcgtcttgtgcggcgtttgatttcgcgtcttgtcgcggtgtttgtttagttcctattgga 23230702  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    | ||| || |||||||||||||||||||| |||| | ||||| ||||||||||||||||| |||||    
T  23230703 agatctacatcagtcaattacaaattcaaccaatgacttgggcgtcaacgttgcagatccggaagc 23230768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 107 - 270
Target Start/End: Complemental strand, 17693741 - 17693578
Alignment:
Q  107 tgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaaat 206  Q
    |||||||||||||||| ||||||  ||||| |||||| || |||||||||| ||||||||| | ||||||  |  ||||| ||||| |||||||| |||     
T  17693741 tgtgatttcgtcgtctaagtgcggtgttgtattgttcgtcttcttgtgcggcgtttgattttgcgttttgtcgcggtgtttgtttagttcctattaaaag 17693642  T
Q  207 atcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    ||| || |||||||||||||||||||| |||| ||||||| |||||| |||||||||| |||||    
T  17693641 atcgacatcagtcaattacaaattcaaccaatgatttgggcgtcaacattgcagatccggaagc 17693578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 105 - 264
Target Start/End: Original strand, 37971243 - 37971402
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||||||| |||||| |||| |||||||| || |||||||||| |||||||||||  ||||   || ||||| ||| | |||||||||||    
T  37971243 tttgtgatttcgtcgtctaagtgcggcgttttgttgttcgtcgtcttgtgcggcgtttgatttcgctttttttcgtggtgtttgttcagttcctattgaa 37971342  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatcc 264  Q
    | ||| || ||| |||||||||||||||| |||| ||||||  |||||||||||||||||    
T  37971343 agatctacatcaatcaattacaaattcaagcaatgatttggacgtcaacgttgcagatcc 37971402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 105 - 270
Target Start/End: Complemental strand, 1239528 - 1239361
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcgg---tgtttgatttcgtgttttggtgttgtgttcgtttaattcctatt 201  Q
    |||||||||||||||||| |||||||| |||||||||||||| ||||||||||   |||||||||| |  | ||| ||  |||||||||   ||| ||||    
T  1239528 tttgtgatttcgtcgtctaagtgcgaccttgtgttgttcatcgtcttgtgcggcgttgtttgatttggcatcttgttgcggtgttcgttgg-ttcatatt 1239430  T
Q  202 gaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    |||| |||||||||||||||| ||| ||||||||||| || |||  |||||||||||||||||||||||    
T  1239429 gaaagatcaacttcagtcaatcacatattcaatcaatgatctggacgtcaacgttgcagatccagaagc 1239361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 105 - 270
Target Start/End: Complemental strand, 40619202 - 40619037
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    ||||||||||| |||||| |||||| ||||||||||||  || ||||||| |  |||||||||||||| ||   |  |||||| |||| ||| |||| ||    
T  40619202 tttgtgatttcatcgtctaagtgcggcgttgtgttgtttgtcgtcttgtgtgacgtttgatttcgtgtcttatcgcggtgttcatttagttcttattcaa 40619103  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    | ||| ||   ||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  40619102 agatcgacaatagtcaattacaaattcaatcaataatttgggcgtcaacgttgcagatccagaagc 40619037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 109 - 270
Target Start/End: Complemental strand, 45445936 - 45445775
Alignment:
Q  109 tgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaaatat 208  Q
    |||||||||||||| ||| ||||||||| |||||| || |||||||||| |||||||||||  |||||  |  ||||| ||||| |||||||||||| ||    
T  45445936 tgatttcgtcgtctaagtacgacgttgtattgttcgtcgtcttgtgcggcgtttgatttcgcattttgtcgcggtgtttgtttatttcctattgaaagat 45445837  T
Q  209 caacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    |  | |||||||||||||||||||| |||| ||||||| |||||||||| | |||| |||||    
T  45445836 cggcatcagtcaattacaaattcaaccaatgatttgggcgtcaacgttgaaaatccggaagc 45445775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 106 - 270
Target Start/End: Complemental strand, 16247351 - 16247187
Alignment:
Q  106 ttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaaa 205  Q
    |||||||||| |||||| |||||| |||||||||||||||| |||||||||  ||||||||||  || |||  |  ||||||||||| ||||||| ||||    
T  16247351 ttgtgatttcttcgtctaagtgcggcgttgtgttgttcatcgtcttgtgcgacgtttgatttcacgtcttgtcgcggtgttcgtttagttcctatggaaa 16247252  T
Q  206 tatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
     ||| || ||| | ||||||||||||||||||| |||||||  |||| ||||||||||| |||||    
T  16247251 gatcgacatcaattaattacaaattcaatcaatgatttgggcatcaatgttgcagatccggaagc 16247187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 105 - 264
Target Start/End: Complemental strand, 28086942 - 28086783
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||||||| |||||  ||||||||||||| || |||||||| |  |||||||||| || |||  |  |||||| || ||||| | |||||    
T  28086942 tttgtgatttcgtcgtctaagtgctgcgttgtgttgttcgtcatcttgtgcagcatttgatttcgcgtcttgtcgcagtgttcattcaattcttgttgaa 28086843  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatcc 264  Q
    | ||| |||||||| ||||||||||||||||||| ||||||  |||||||||||||||||    
T  28086842 agatcgacttcagttaattacaaattcaatcaatgatttggaagtcaacgttgcagatcc 28086783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 24 - 262
Target Start/End: Original strand, 5046636 - 5046870
Alignment:
Q  24 atgcatctttttcccctttcttttaatttaaattagtggatttcacacatatcaaattttacattttgtgcnnnnnnnnngtttgtgatttcgtcgtctg 123  Q
    ||||||||||||||||||||||||||||||||| ||||  ||||||||||||||| |||||| |||||||           ||| |||||||||||  |     
T  5046636 atgcatctttttcccctttcttttaatttaaataagtgattttcacacatatcaagttttactttttgtg--------ttttttatgatttcgtcgatta 5046727  T
Q  124 agtgcgacgttg----tgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaaatatcaacttcagtc 219  Q
    | ||||||||||    |||||||| || | |||||||| ||||||||||     ||| | | || |||||||  |||||||||||| ||||| |||||||    
T  5046728 aatgcgacgttgtacatgttgttcgtcgtattgtgcggcgtttgatttcacaccttgttttggtattcgtttggttcctattgaaaaatcaaattcagtc 5046827  T
Q  220 aattacaaattcaatcaataatttgggtgtcaacgttgcagat 262  Q
    ||||||| ||||||||||||||||||  ||| |||||||||||    
T  5046828 aattacagattcaatcaataatttggacgtcgacgttgcagat 5046870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 105 - 270
Target Start/End: Complemental strand, 7677412 - 7677247
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    ||||||||||| |||||| | |||| ||||||||||||| || |||||||| |  |||||||||| || |||  |  ||||||||||  |||||| ||||    
T  7677412 tttgtgatttcatcgtctaattgcggcgttgtgttgttcgtcgtcttgtgctgcatttgatttcgcgtcttgtcgcggtgttcgtttggttcctactgaa 7677313  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    |||||||| ||||||||||||| |||| | |||| ||||| | ||||||||||||||||| |||||    
T  7677312 atatcaacatcagtcaattacagattcgaccaatgatttgagcgtcaacgttgcagatccggaagc 7677247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 105 - 270
Target Start/End: Complemental strand, 20553370 - 20553205
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||||||| |||||| |||| |||||||| || |||| ||||| ||||||||| |||| |||  |  ||||| ||| | |||||||||||    
T  20553370 tttgtgatttcgtcgtctaagtgcggcgttttgttgttcgtcgtcttatgcggcgtttgattttgtgtcttgtcgcggtgtttgttcagttcctattgaa 20553271  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    | ||| |  ||| |||||||||||||||| |||| ||||||  ||||||||||||||||| |||||    
T  20553270 agatctatatcaatcaattacaaattcaagcaatgatttggacgtcaacgttgcagatccggaagc 20553205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 105 - 270
Target Start/End: Complemental strand, 20559873 - 20559708
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||||||| |||||  |||| |||||||| || ||||||||||  |||||||| |||| |||| |  ||||| ||| | |||||||||||    
T  20559873 tttgtgatttcgtcgtctaagtgcatcgttttgttgttcgtcgtcttgtgcggcctttgattttgtgtcttggcgcggtgtttgttcagttcctattgaa 20559774  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    | ||| |  ||| |||||||||||||||| |||| ||||||  ||||||||||||||||| |||||    
T  20559773 agatctatatcaatcaattacaaattcaagcaatgatttggacgtcaacgttgcagatccggaagc 20559708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 105 - 270
Target Start/End: Complemental strand, 20571435 - 20571270
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||||||| |||||  |||| |||||||| || ||||||||||  |||||||| |||| |||| |  ||||| ||| | |||||||||||    
T  20571435 tttgtgatttcgtcgtctaagtgcatcgttttgttgttcgtcgtcttgtgcggcctttgattttgtgtcttggcgcggtgtttgttcagttcctattgaa 20571336  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    | ||| |  ||| |||||||||||||||| |||| ||||||  ||||||||||||||||| |||||    
T  20571335 agatctatatcaatcaattacaaattcaagcaatgatttggacgtcaacgttgcagatccggaagc 20571270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 105 - 262
Target Start/End: Original strand, 28897669 - 28897826
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    ||||||||||||| |||| | |||||||||||||||||  || || |||| || ||||||||||| || |||  || ||||||||||| |||||||||||    
T  28897669 tttgtgatttcgttgtctaattgcgacgttgtgttgttagtcatcgtgtgtggcgtttgatttcgcgtcttgtcgtggtgttcgtttagttcctattgaa 28897768  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagat 262  Q
    | ||| || ||||||||||| || |||||| ||| ||||||| || ||||||||||||    
T  28897769 agatcgacatcagtcaattataagttcaattaatgatttgggcgtaaacgttgcagat 28897826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 105 - 270
Target Start/End: Complemental strand, 1236828 - 1236661
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcgg---tgtttgatttcgtgttttggtgttgtgttcgtttaattcctatt 201  Q
    |||||||||||||||||| |||||||| ||||||||||| |  ||||||||||   |||||||||| |  | ||| ||  |||||||||   ||| ||||    
T  1236828 tttgtgatttcgtcgtctaagtgcgaccttgtgttgttcgttgtcttgtgcggcgttgtttgatttggcatcttgttgcggtgttcgttgg-ttcatatt 1236730  T
Q  202 gaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    |||| |||||||||||||||| ||| ||||||||||| || |||  |||||||||||||||||||||||    
T  1236729 gaaagatcaacttcagtcaatcacatattcaatcaatgatctggacgtcaacgttgcagatccagaagc 1236661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 105 - 270
Target Start/End: Complemental strand, 7883370 - 7883205
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||| ||| |||||| ||||||||||||| || |||||||||| ||||||||||  || |||  |  ||||| ||| | ||| |||||||    
T  7883370 tttgtgatttcgtcatctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgatttcacgtcttgtcgcggtgtttgttcagttcatattgaa 7883271  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    | ||| || | | |||||||||||||||| |||||||||||  |||| |||||||||||| |||||    
T  7883270 agatctacattaatcaattacaaattcaagcaataatttggacgtcagcgttgcagatccggaagc 7883205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 105 - 270
Target Start/End: Complemental strand, 14545032 - 14544867
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||||||| | |||| |||||| |||||  || ||||||| || ||||||||||  || |||  |  |||||| |||| |||||||||||    
T  14545032 tttgtgatttcgtcgtctaattgcggcgttgttttgttagtcgtcttgtgtggcgtttgatttcacgtcttgtcgcggtgttcatttagttcctattgaa 14544933  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    | ||| || ||| |||||||||| || ||||||| ||||||| ||||||||||||||||| |||||    
T  14544932 agatcgacatcaatcaattacaagttaaatcaattatttgggcgtcaacgttgcagatccggaagc 14544867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 105 - 262
Target Start/End: Complemental strand, 27498493 - 27498337
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    ||||| |||||||||||| |||| | | ||||||||||| || |||||||||   |||||||||| || |||  || |||||| ||||||||||||||||    
T  27498493 tttgtaatttcgtcgtctaagtgtgccattgtgttgttcgtcgtcttgtgcgacatttgatttcgcgtcttgtcgtggtgttcatttaattcctattgaa 27498394  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagat 262  Q
    | ||||||||||||  | |||||||||||| ||| ||||||| |||||| ||||||||    
T  27498393 agatcaacttcagt-tagtacaaattcaattaatgatttgggcgtcaacattgcagat 27498337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 108 - 270
Target Start/End: Original strand, 39657410 - 39657579
Alignment:
Q  108 gtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcgg---tgtttgatttcg--tgttttggtgtt--gtgttcgtttaattcctat 200  Q
    ||||||||||||||| ||||||||||||| |||||| || ||||||||||   ||||||||||||  | ||||| |||   ||||||||||  ||| |||    
T  39657410 gtgatttcgtcgtcttagtgcgacgttgtattgttcgtcgtcttgtgcggcgttgtttgatttcgcatcttttgttgtgcggtgttcgtttggttcgtat 39657509  T
Q  201 tgaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    ||||| || | |||||| |||| | ||||||||||||| ||||||  |||||||||||||||||||||||    
T  39657510 tgaaagattagcttcagacaatcataaattcaatcaatgatttggacgtcaacgttgcagatccagaagc 39657579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 105 - 270
Target Start/End: Complemental strand, 40211431 - 40211266
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||||||| | || | ||||||||||||| || |||| ||| ||||||||||||| || |||  |  ||||| ||||| || ||||||||    
T  40211431 tttgtgatttcgtcgtctaaatgtggcgttgtgttgttcgtcgtcttatgcagtgtttgatttcgcgtattgtcgcggtgtttgtttagtttctattgaa 40211332  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    | ||| || |||||| ||||||||||| | |||| ||||||| |||||||||| |||||| |||||    
T  40211331 agatctacatcagtcgattacaaattccaccaatgatttgggcgtcaacgttgtagatccggaagc 40211266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 109 - 270
Target Start/End: Complemental strand, 8443639 - 8443475
Alignment:
Q  109 tgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcgg---tgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaaa 205  Q
    |||||||||||||| ||||||  |||||||||||| || ||||||||||   ||||||||| || || ||| ||  ||||||||||  |||   ||||||    
T  8443639 tgatttcgtcgtctaagtgcggtgttgtgttgttcgtcgtcttgtgcggcgttgtttgattccgcgtcttgttgcagtgttcgtttggttcaatttgaaa 8443540  T
Q  206 tatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
     |||||||||||||||| ||| ||||||||||| ||||||   |||||||||||||||| |||||    
T  8443539 gatcaacttcagtcaatcacatattcaatcaatgatttggacatcaacgttgcagatccggaagc 8443475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 132 - 265
Target Start/End: Complemental strand, 29617379 - 29617243
Alignment:
Q  132 gttgtgttgttcatcctcttgtgcgg---tgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaaatatcaacttcagtcaattacaaa 228  Q
    |||||||||||| || ||||||||||   |||||||||||| || ||| ||  ||||||||||  ||| |||||||| | |||||||||||||| ||| |    
T  29617379 gttgtgttgttcgtcgtcttgtgcggcgctgtttgatttcgcgtcttgttgcggtgttcgtttggttcttattgaaagaccaacttcagtcaatcacaga 29617280  T
Q  229 ttcaatcaataatttgggtgtcaacgttgcagatcca 265  Q
    |||||||||| ||||||  ||||||||||||||||||    
T  29617279 ttcaatcaatgatttggacgtcaacgttgcagatcca 29617243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 104 - 270
Target Start/End: Complemental strand, 14916320 - 14916151
Alignment:
Q  104 gtttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcgg---tgtttgatttcgtgttttggtgttgtgttcgtttaattcctat 200  Q
    |||||||||||||||||||| ||||| ||||| ||||| | |||| ||||||||   ||||||||||| ||| ||| ||  ||||||||||  ||| |||    
T  14916320 gtttgtgatttcgtcgtctgggtgcggcgttgcgttgtccgtccttttgtgcggcactgtttgatttcatgtcttgttgcggtgttcgtttggttcatat 14916221  T
Q  201 tgaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    ||||| | |||||||| ||||| | | ||||||||||| ||||||  ||| | ||||||||||| |||||    
T  14916220 tgaaagaccaacttcaatcaatcagagattcaatcaatgatttggacgtccatgttgcagatccggaagc 14916151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 105 - 270
Target Start/End: Complemental strand, 25191196 - 25191029
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    ||||| ||||||| |||| ||| |  ||||||||||||| || |||||||||| |||||||||||  |||||  |  ||||| ||||| |||||||||||    
T  25191196 tttgtaatttcgttgtctaagtacagcgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgctttttgtcgcggtgtttgtttatttcctattgaa 25191097  T
Q  205 atatcaacttcagtcaattacaaattcaatcaat--aatttgggtgtcaacgttgcagatccagaagc 270  Q
    | |||| | |||||||||||  ||||||| ||||   ||||||| |||||||||| |||||| |||||    
T  25191096 agatcagcatcagtcaattatgaattcaaccaatgatatttgggcgtcaacgttgaagatccggaagc 25191029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 183 - 270
Target Start/End: Original strand, 14585715 - 14585802
Alignment:
Q  183 tgttcgtttaattcctattgaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    |||||||||  ||| ||||||||||||| |||||| |||| ||||||||||||| | ||||||  |||||||||||||||||||||||    
T  14585715 tgttcgtttggttcgtattgaaatatcagcttcagacaatcacaaattcaatcattgatttggacgtcaacgttgcagatccagaagc 14585802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 159 - 270
Target Start/End: Complemental strand, 33214746 - 33214635
Alignment:
Q  159 gtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgc 258  Q
    ||||||||||| || |||  || |||||| |||| |||||||||||| |||  | |||||||||||||||||||| |||| |||||||  ||||||||||    
T  33214746 gtttgatttcgcgtcttgtcgtggtgttcttttagttcctattgaaagatcggcgtcagtcaattacaaattcaaccaatgatttgggcttcaacgttgc 33214647  T
Q  259 agatccagaagc 270  Q
    |||||| |||||    
T  33214646 agatccggaagc 33214635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 108 - 262
Target Start/End: Original strand, 34609793 - 34609953
Alignment:
Q  108 gtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtg---cggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    ||||||||||||||| |||||| ||||| ||||||| || |||||||   || | |||||||| |||| ||| ||  ||||||||||  |||| ||||||    
T  34609793 gtgatttcgtcgtctaagtgcggcgttgggttgttcctcgtcttgtgcgacgttatttgattttgtgtcttgttgcggtgttcgtttgtttcc-attgaa 34609891  T
Q  205 atatcaacttcagtcaa----ttacaaattcaatcaataatttgggtgtcaacgttgcagat 262  Q
    | |||||||||||||||    |||||||| |||||||| ||||||| || ||||||||||||    
T  34609892 agatcaacttcagtcaatcagttacaaatgcaatcaatgatttgggcgtgaacgttgcagat 34609953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 109 - 270
Target Start/End: Complemental strand, 471291 - 471130
Alignment:
Q  109 tgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaaatat 208  Q
    |||||| ||||||  |||||| || |||||||||| || ||| |||||  ||||||||| |||| ||| ||  ||| ||||||  ||| |||||||| ||    
T  471291 tgattttgtcgtccaagtgcggcgctgtgttgttcgtcgtctggtgcgacgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagat 471192  T
Q  209 caacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    || ||||| ||||| | | ||||||||||| ||||| | ||||||||||||||||| |||||    
T  471191 catcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgcagatccggaagc 471130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 198 - 270
Target Start/End: Original strand, 15344361 - 15344433
Alignment:
Q  198 tattgaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    |||||||| ||||| |||||||||| ||| ||||||||||| ||||||  |||||||||||||||||||||||    
T  15344361 tattgaaagatcaagttcagtcaatcacagattcaatcaatgatttggacgtcaacgttgcagatccagaagc 15344433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 198 - 270
Target Start/End: Original strand, 15433426 - 15433498
Alignment:
Q  198 tattgaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    |||||||| ||||| |||||||||| ||| ||||||||||| ||||||  |||||||||||||||||||||||    
T  15433426 tattgaaagatcaagttcagtcaatcacagattcaatcaatgatttggacgtcaacgttgcagatccagaagc 15433498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 198 - 270
Target Start/End: Original strand, 15524730 - 15524802
Alignment:
Q  198 tattgaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    |||||||| ||||| |||||||||| ||| ||||||||||| ||||||  |||||||||||||||||||||||    
T  15524730 tattgaaagatcaagttcagtcaatcacagattcaatcaatgatttggacgtcaacgttgcagatccagaagc 15524802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 132 - 264
Target Start/End: Complemental strand, 24186762 - 24186631
Alignment:
Q  132 gttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaaatatcaacttcagtcaattacaaattc 231  Q
    |||||||||||  |  ||||||| ||  |||||||||| ||||||  ||  |||||||||| ||||||||| || ||  || ||||||||||| || |||    
T  24186762 gttgtgttgttagttgtcttgtgtggcatttgatttcgcgttttgtcgtgatgttcgtttagttcctattg-aagattgacatcagtcaattataagttc 24186664  T
Q  232 aatcaataatttgggtgtcaacgttgcagatcc 264  Q
    ||||||||||||||| |||||||||||||||||    
T  24186663 aatcaataatttgggcgtcaacgttgcagatcc 24186631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 194 - 262
Target Start/End: Complemental strand, 31013648 - 31013580
Alignment:
Q  194 ttcctattgaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagat 262  Q
    |||||||||||||||| || ||||||||||| ||||||||||||| ||||||  |||||||||||||||    
T  31013648 ttcctattgaaatatctacatcagtcaattaaaaattcaatcaatgatttggacgtcaacgttgcagat 31013580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 131 - 243
Target Start/End: Complemental strand, 36948540 - 36948428
Alignment:
Q  131 cgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaaatatcaacttcagtcaattacaaatt 230  Q
    ||||||||||||  || || ||||||| ||||||||||| || |||  |  ||||| |||||||||||||||||| ||  || |||||||||||||||||    
T  36948540 cgttgtgttgtttgtcgtcctgtgcggcgtttgatttcgcgtcttgtcgcggtgtttgtttaattcctattgaaaaattgacatcagtcaattacaaatt 36948441  T
Q  231 caatcaataattt 243  Q
    |||||||| ||||    
T  36948440 caatcaatgattt 36948428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 198 - 270
Target Start/End: Original strand, 42046274 - 42046346
Alignment:
Q  198 tattgaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    |||||||| |||| |||||| |||| ||||||||||||||| ||||||| ||||| |||||||||||||||||    
T  42046274 tattgaaagatcagcttcagacaatcacaaattcaatcaatgatttgggcgtcaatgttgcagatccagaagc 42046346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 108 - 269
Target Start/End: Complemental strand, 24099384 - 24099215
Alignment:
Q  108 gtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgt---gcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||||||||||||||||||||||||| || || |||   ||| ||||||||||||  | ||| ||  |||||| |||  ||| |||||||    
T  24099384 gtgatttcgtcgtctgagtgcgacgttgtgttgttcgtcgtcctgtaccgcgttgtttgatttcgcatcttgttgcggtgttcatttggttcatattgaa 24099285  T
Q  205 atatcaacttcagtca-----attacaaattcaatcaataatttgggtgtcaacgttgcagatccagaag 269  Q
    | |||| |||||||||     || ||||||||| ||||| |||||   ||||||||||||||||| ||||    
T  24099284 aaatcagcttcagtcaatcgcatcacaaattcattcaatgatttgtacgtcaacgttgcagatccggaag 24099215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 108 - 253
Target Start/End: Complemental strand, 20227409 - 20227262
Alignment:
Q  108 gtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcgg---tgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||| ||||||||||||| |||||| |||||| || |||| ||||    |||||||||||   ||||| ||| || || ||||  || ||||| ||    
T  20227409 gtgatttcatcgtctgagtgcgtcgttgtattgttcgtcgtcttctgcgacgttgtttgatttcacattttgttgt-gtatttgtttggtttctattaaa 20227311  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaac 253  Q
    | |||  ||| ||||||||||||||||||||||||||||||||||||||    
T  20227310 agatcggcttaagtcaattacaaattcaatcaataatttgggtgtcaac 20227262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 108 - 270
Target Start/End: Original strand, 41896473 - 41896642
Alignment:
Q  108 gtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcgg---tgtttgatttcg--tgttttggtgtt--gtgttcgtttaattcctat 200  Q
    |||||||| |||||| ||| |||||||||||||||  || ||||||||||   |||||||||||   | ||||| |||   ||||||||||  ||| |||    
T  41896473 gtgatttcatcgtcttagtacgacgttgtgttgttggtcgtcttgtgcggcgttgtttgatttcacatattttgttgtgcggtgttcgtttggttcgtat 41896572  T
Q  201 tgaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    ||||| |||| |||||| |||| ||||||||||| ||| |||| ||  ||||||||||||||| ||||||    
T  41896573 tgaaagatcagcttcagacaatcacaaattcaattaatgatttaggcatcaacgttgcagatctagaagc 41896642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 108 - 259
Target Start/End: Original strand, 8826172 - 8826325
Alignment:
Q  108 gtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgt---gcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||||||||||  |||| |||||||| || ||||||   ||| ||| ||| ||||||| ||| ||  |||||| ||| |||| |||||||    
T  8826172 gtgatttcgtcgtctgagtgcagcgttatgttgttcgtcgtcttgtgtggcgttgtgtgaattcgtgtcttgttgcggtgttc-tttgattcatattgaa 8826270  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgca 259  Q
    |||||||||||| | ||| |   ||||||||||| |||||||  |||||||||||    
T  8826271 atatcaacttcaatgaatcatcgattcaatcaatgatttgggcatcaacgttgca 8826325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 148 - 264
Target Start/End: Complemental strand, 33347606 - 33347491
Alignment:
Q  148 tcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaaatatcaacttcagtcaattacaaattcaatcaataatttgggt 247  Q
    ||||||| || |||||||||| ||| ||| ||  |||||| ||| || |||||||||| |||||||||||||||| ||| ||||||||||| |||| ||     
T  33347606 tcttgtgtggcgtttgatttcatgtcttgttgcggtgttcatttgat-cctattgaaagatcaacttcagtcaatcacagattcaatcaatgatttaggc 33347508  T
Q  248 gtcaacgttgcagatcc 264  Q
    ||| ||||||| |||||    
T  33347507 gtcgacgttgcggatcc 33347491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 132 - 262
Target Start/End: Complemental strand, 9637511 - 9637381
Alignment:
Q  132 gttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaaatatcaacttcagtcaattacaaattc 231  Q
    |||||||||||| || |||||| ||   |||||||||| || ||  ||  || |||||||| |||||||||||| |||||| ||||| |||||||||  |    
T  9637511 gttgtgttgttcgtcgtcttgtacgacatttgatttcgcgtcttattgcagtattcgtttagttcctattgaaagatcaacatcagttaattacaaacac 9637412  T
Q  232 aatcaataatttgggtgtcaacgttgcagat 262  Q
    ||| ||| ||||| | |||||||||||||||    
T  9637411 aattaatgatttgagcgtcaacgttgcagat 9637381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 197 - 264
Target Start/End: Complemental strand, 16928794 - 16928727
Alignment:
Q  197 ctattgaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatcc 264  Q
    ||||||||| ||| || |||||||||||||||||||| |||| ||||||   ||||||||||||||||    
T  16928794 ctattgaaagatcgacatcagtcaattacaaattcaaccaatgatttggacatcaacgttgcagatcc 16928727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 269
Target Start/End: Original strand, 3240340 - 3240504
Alignment:
Q  108 gtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcgg---tgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||||| || |  | ||||||||||| || |||||| ||    |||||||||||| || ||| ||| ||||| ||||  ||  |||||||    
T  3240340 gtgatttcgtcgtctgtgtacatcattgtgttgttcgtcgtcttgtacgacgttgtttgatttcgcgtgttgttgtggtgtttgtttggttaatattgaa 3240439  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaag 269  Q
    | |||  ||||||||||| ||| |||||||| || ||||||  | ||| ||||||||||||||||    
T  3240440 agatcggcttcagtcaatcacatattcaatcgatgatttggacgccaatgttgcagatccagaag 3240504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 105 - 263
Target Start/End: Complemental strand, 27110594 - 27110436
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    ||||| |||||||| ||| | |||  |||||||||| |  || ||||||| || ||||||||| | || |||  |  ||||||||||| ||| | |||||    
T  27110594 tttgtaatttcgtcatctaattgcagcgttgtgttggtagtcgtcttgtgtggcgtttgattttgcgtcttgtcgcagtgttcgtttagttcatgttgaa 27110495  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatc 263  Q
    | ||  || |||| ||| |||||||||||||||| ||||| | ||||||||||||||||    
T  27110494 agattgacatcagacaactacaaattcaatcaatgatttgagcgtcaacgttgcagatc 27110436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 185 - 270
Target Start/End: Complemental strand, 43834044 - 43833960
Alignment:
Q  185 ttcgtttaattcctattgaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    |||||||  |||||||||||  || |||||||| |||| ||||||||||||||| |||| |  |||||||||||||||| ||||||    
T  43834044 ttcgtttggttcctattgaag-attaacttcagacaatcacaaattcaatcaatgatttagacgtcaacgttgcagatctagaagc 43833960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 226 - 270
Target Start/End: Complemental strand, 7198203 - 7198159
Alignment:
Q  226 aaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    ||||||||||||| |||||| |||||||||||||||||| |||||    
T  7198203 aaattcaatcaatgatttggatgtcaacgttgcagatccggaagc 7198159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 157
Target Start/End: Original strand, 14585663 - 14585711
Alignment:
Q  109 tgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcgg 157  Q
    |||||||||||||| || ||||||||||||||||| || ||||||||||    
T  14585663 tgatttcgtcgtcttagcgcgacgttgtgttgttcgtcgtcttgtgcgg 14585711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 264
Target Start/End: Complemental strand, 44091805 - 44091726
Alignment:
Q  182 gtgttcgtttaattcctattgaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatcc 264  Q
    ||||||||||| ||||| |||||| ||| || ||| |||| |||||||||||||   ||||||  ||||||||||||||||||    
T  44091805 gtgttcgtttagttcctgttgaaagatcgacatcaatcaaatacaaattcaatc---aatttgaatgtcaacgttgcagatcc 44091726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 108 - 143
Target Start/End: Complemental strand, 5917757 - 5917722
Alignment:
Q  108 gtgatttcgtcgtctgagtgcgacgttgtgttgttc 143  Q
    ||||||||||||||| ||||||||||||||||||||    
T  5917757 gtgatttcgtcgtcttagtgcgacgttgtgttgttc 5917722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 182 - 257
Target Start/End: Complemental strand, 26469198 - 26469123
Alignment:
Q  182 gtgttcgtttaattcctattgaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttg 257  Q
    ||||||||||  |||||||||||| ||||| || ||| |||  || ||||||||||| ||||||| ||||||||||    
T  26469198 gtgttcgttttgttcctattgaaagatcaagtttagttaatcgcatattcaatcaatgatttgggcgtcaacgttg 26469123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 105 - 211
Target Start/End: Complemental strand, 26469340 - 26469231
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtg---cggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctatt 201  Q
    |||||||||| || |||  ||||||||||| ||||||||||| |||||||   || ||||||| ||| ||| ||| ||  ||||||||||  ||||||||    
T  26469340 tttgtgattttgttgtccaagtgcgacgttatgttgttcatcgtcttgtgcaacgttgtttgacttcatgtcttgttgcagtgttcgtttggttcctatt 26469241  T
Q  202 gaaatatcaa 211  Q
    |||| |||||    
T  26469240 gaaagatcaa 26469231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 151
Target Start/End: Complemental strand, 16937357 - 16937311
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctctt 151  Q
    |||||||||||||||||| |||||||| |||| ||||||||| ||||    
T  16937357 tttgtgatttcgtcgtcttagtgcgaccttgttttgttcatcgtctt 16937311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 188 - 270
Target Start/End: Original strand, 29939343 - 29939425
Alignment:
Q  188 gtttaattcctattgaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    ||||||||  |||||||| ||| |  |||||||||||| ||||||| |||| ||||||| || ||||||||| ||||| ||||    
T  29939343 gtttaatttatattgaaagatcgatctcagtcaattactaattcaaccaatgatttgggcgttaacgttgcatatccataagc 29939425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 199 - 244
Target Start/End: Complemental strand, 8918366 - 8918321
Alignment:
Q  199 attgaaatatcaacttcagtcaattacaaattcaatcaataatttg 244  Q
    ||||||||||||||| || ||||| ||||||||||| |||||||||    
T  8918366 attgaaatatcaactccaatcaatcacaaattcaataaataatttg 8918321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 265
Target Start/End: Original strand, 24853919 - 24853984
Alignment:
Q  200 ttgaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatcca 265  Q
    ||||||||||  |||| |||||||||| |||||||||||||||| ||  ||||| || ||||||||    
T  24853919 ttgaaatatcggcttctgtcaattacatattcaatcaataatttaggcatcaacattccagatcca 24853984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 270
Target Start/End: Original strand, 21237827 - 21237915
Alignment:
Q  182 gtgttcgtttaattcctattgaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    ||||||||||  ||| |||||||| | ||  |||| |||||  || ||||||||||| ||||||  ||||| |||||||||||||||||    
T  21237827 gtgttcgtttggttcatattgaaagaccagtttcaatcaatcccatattcaatcaatgatttggacgtcaatgttgcagatccagaagc 21237915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 82; Significance: 9e-39; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 105 - 270
Target Start/End: Original strand, 13007186 - 13007351
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||||||| |||||| ||||||||||||| || |||||||||| ||||||||| ||||||||  |  ||||| ||||| ||||| |||||    
T  13007186 tttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgattttgtgttttgtcgcggtgtttgtttagttcctcttgaa 13007285  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    | ||| || |||||||||||||||||||| |||| ||||||  ||||||||||||||||| |||||    
T  13007286 agatctacatcagtcaattacaaattcaaccaatgatttggacgtcaacgttgcagatccggaagc 13007351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 105 - 270
Target Start/End: Original strand, 38597754 - 38597919
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||||||| |||||| ||||||||||||| || |||||||||| ||||||||||| || |||  || ||||| ||| | |||||||||||    
T  38597754 tttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgtcttgtcgtggtgtttgttcagttcctattgaa 38597853  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    | ||| || |||||||||||||||||||| |||| ||||||  ||||||||||||||||| |||||    
T  38597854 agatctacatcagtcaattacaaattcaaccaatgatttggacgtcaacgttgcagatccggaagc 38597919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 105 - 262
Target Start/End: Original strand, 13421890 - 13422047
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    ||||||||||  |||||| |||| || |||||||||||| || ||||||||||| |||||||||| || |||  ||||||||| |||| |||||||||||    
T  13421890 tttgtgattttttcgtctaagtgtgatgttgtgttgttcgtcgtcttgtgcggtatttgatttcgcgtattgtcgttgtgttcatttagttcctattgaa 13421989  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagat 262  Q
    | ||| || ||||||||||||||||||||||||| ||||||| ||||| |||||||||    
T  13421990 agatcgacatcagtcaattacaaattcaatcaatgatttgggcgtcaatgttgcagat 13422047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 105 - 270
Target Start/End: Original strand, 35850756 - 35850921
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||||||| ||| |||||||||||||||| || |||||||||| ||||||||||| |||||   |  ||||| ||||| |||||||||||    
T  35850756 tttgtgatttcgtcgtctaagtacgacgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgttttatcgcggtgtttgtttatttcctattgaa 35850855  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    | |||  | |||||||||||||||||||| |||| ||||| | |||||||||| ||||||||||||    
T  35850856 agatcggcatcagtcaattacaaattcaaccaatgatttgtgcgtcaacgttgaagatccagaagc 35850921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 105 - 270
Target Start/End: Original strand, 38007315 - 38007480
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||||||| ||| |||| ||||| |||||||| |||||||||| ||||||||||||||||||  |  ||||| ||||| |||||||||||    
T  38007315 tttgtgatttcgtcgtctaagtacgacattgtgctgttcatcgtcttgtgcggcgtttgatttcgtgttttgtcgcggtgtttgtttatttcctattgaa 38007414  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    | |||  | ||||||||||||||||| || |||| ||||||  |||||||||| |||||| |||||    
T  38007415 agatcggcatcagtcaattacaaatttaaccaatgatttggacgtcaacgttgaagatccggaagc 38007480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 105 - 269
Target Start/End: Complemental strand, 31391884 - 31391720
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||||||| |||||||||||||||||||| || ||||||||||  ||||||||||  | |||  |  ||||| ||||| ||  |||||||    
T  31391884 tttgtgatttcgtcgtctaagtgcgacgttgtgttgttcttcgtcttgtgcggcatttgatttcgcatcttgtcgcagtgtttgtttagtttttattgaa 31391785  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaag 269  Q
    | |||  | |||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||    
T  31391784 agatcggcatcagtcaattacaaattcaaccaatgatttgggcgtcaacgttgcagatccagaag 31391720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 105 - 270
Target Start/End: Complemental strand, 9113856 - 9113691
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||||||| |||||| |||| |||||||| || |||||||||| ||||||||||  ||||||  |  ||||| ||| | ||||| |||||    
T  9113856 tttgtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcggcgtttgatttcacgttttgtcgcggtgtttgttcagttcctcttgaa 9113757  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    | ||| || |||||||||||||||||||| |||| ||||||  ||||||||||||||||| |||||    
T  9113756 agatctacatcagtcaattacaaattcaaccaatgatttggacgtcaacgttgcagatccggaagc 9113691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 105 - 270
Target Start/End: Complemental strand, 14726592 - 14726427
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||||||| ||||||  |||||||||||| || ||||||||| |||||||||||| || |||     ||||| ||||| ||| |||||||    
T  14726592 tttgtgatttcgtcgtctaagtgcggtgttgtgttgttcgtcgtcttgtgcgatgtttgatttcgcgtcttgtcacggtgttagtttatttcttattgaa 14726493  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    | |||  | ||||||||| |||||||||| |||| |||||||||||||||||| |||||| |||||    
T  14726492 agatcggcatcagtcaatcacaaattcaaccaatgatttgggtgtcaacgttgaagatccggaagc 14726427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 108 - 270
Target Start/End: Complemental strand, 28541041 - 28540872
Alignment:
Q  108 gtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcgg---tgtttgatttcgtgt--tttg--gtgttgtgttcgtttaattcctat 200  Q
    |||||||| |||||| |||||||||||||||||||| || ||||||||||   ||||||||||||  |  ||||  |||| ||||||||||  ||| |||    
T  28541041 gtgatttcatcgtcttagtgcgacgttgtgttgttcgtcgtcttgtgcggcgttgtttgatttcgcatcatttgttgtgtggtgttcgtttggttcgtat 28540942  T
Q  201 tgaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    ||||| || | |||||| |||| ||||||||||||||| ||||||| |||||||||||||||||||||||    
T  28540941 tgaaagattagcttcagacaatcacaaattcaatcaatgatttgggcgtcaacgttgcagatccagaagc 28540872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 108 - 270
Target Start/End: Complemental strand, 2979441 - 2979272
Alignment:
Q  108 gtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcgg---tgtttgatttcgtgt----tttggtgttgtgttcgtttaattcctat 200  Q
    ||||||||||||||| |||||||||||||||||||| || ||||||||||   ||||| ||| ||  |    ||| |||  ||||||||||  ||| |||    
T  2979441 gtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtcttgtgcggcgttgtttcattccgcatccttttttgtgcggtgttcgtttggttcgtat 2979342  T
Q  201 tgaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    | ||| ||||||||||| |||| ||||||||||||||| ||||||| |||||||||||||||||||||||    
T  2979341 taaaagatcaacttcagacaatcacaaattcaatcaatgatttgggcgtcaacgttgcagatccagaagc 2979272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 105 - 270
Target Start/End: Complemental strand, 6012269 - 6012104
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    ||||||||||| |||||| ||||||  |||||||||||| || |||||||||| ||||||||||| ||||||  |  ||||| ||| | |||||||| ||    
T  6012269 tttgtgatttcatcgtctaagtgcggtgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgttttgtcgcggtgtttgttcagttcctattaaa 6012170  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    | ||| || |||||||||||||||||||| |||| ||||||  ||||| |||| |||||| |||||    
T  6012169 agatctacatcagtcaattacaaattcaaccaatgatttggacgtcaatgttgtagatccggaagc 6012104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 105 - 262
Target Start/End: Original strand, 25980115 - 25980272
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||| ||||||||||| ||||||   ||||||||||| || |||||||||| |||| |||||| || |||  |  ||||| ||||| |||||||||||    
T  25980115 tttgtggtttcgtcgtctaagtgcggtattgtgttgttcgtcgtcttgtgcggcgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattgaa 25980214  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagat 262  Q
    | |||||| |||||||| ||||||||||| |||| ||||||| ||||| |||||||||    
T  25980215 agatcaacatcagtcaactacaaattcaaccaatgatttgggcgtcaaagttgcagat 25980272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 182 - 270
Target Start/End: Original strand, 41630536 - 41630624
Alignment:
Q  182 gtgttcgtttaattcctattgaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    ||||||||||| |||||||| ||| ||| |||||||||||||||||||||||||||| ||||||| |||||||||||| ||||||||||    
T  41630536 gtgttcgtttagttcctattaaaagatcgacttcagtcaattacaaattcaatcaatgatttgggcgtcaacgttgcacatccagaagc 41630624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 105 - 264
Target Start/End: Complemental strand, 11074031 - 11073872
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    ||||||||||||| |||| |||||  |||||| |||||| || |||||||||| ||||||||||| || |||  |  ||||| ||| | |||||||||||    
T  11074031 tttgtgatttcgttgtctaagtgcagcgttgttttgttcgtcgtcttgtgcggcgtttgatttcgcgtcttgtcgcggtgtttgttcagttcctattgaa 11073932  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatcc 264  Q
    ||||| || ||| |||||||||||||||| |||| ||||||  ||||||||| |||||||    
T  11073931 atatctacatcaatcaattacaaattcaagcaatgatttggacgtcaacgttacagatcc 11073872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 105 - 244
Target Start/End: Original strand, 26825387 - 26825526
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||| ||| |||||| ||||||||||||| || |||||||||| ||||||||||| ||||||  |  ||||| ||| | ||||| |||||    
T  26825387 tttgtgatttcgtcttctaagtgcggcgttgtgttgttcgtcttcttgtgcggcgtttgatttcgcgttttgtcgcggtgtttgttcagttcctcttgaa 26825486  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttg 244  Q
    | ||| || |||||||||||||||||||| |||| |||||    
T  26825487 agatctacatcagtcaattacaaattcaaccaatgatttg 26825526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 108 - 270
Target Start/End: Original strand, 14211180 - 14211349
Alignment:
Q  108 gtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcgg---tgtttgatttcgtgt--tttggtgtt--gtgttcgtttaattcctat 200  Q
    ||||||||||||||| |||||||| ||||||||||| || ||||||||||   ||||||||||||  |  |||| |||   ||||||||||  ||| |||    
T  14211180 gtgatttcgtcgtcttagtgcgacattgtgttgttcgtcgtcttgtgcggcgttgtttgatttcgcatcctttgttgtgcggtgttcgtttggttcgtat 14211279  T
Q  201 tgaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    ||||| |||| |||||| |||| |||||| |||||||| ||||||  |||||||||||||||||||||||    
T  14211280 tgaaagatcagcttcagacaatcacaaatgcaatcaatgatttggacgtcaacgttgcagatccagaagc 14211349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 105 - 264
Target Start/End: Complemental strand, 24229915 - 24229756
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||| ||| |||||| |||| |||||||| || ||||||| |  ||||||||||| || |||  |  ||||| ||||| |||||||||||    
T  24229915 tttgtgatttcgtcatctaagtgcggcgttttgttgttcgtcgtcttgtgtgacgtttgatttcgcgtcttgtcgcggtgtttgtttagttcctattgaa 24229816  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatcc 264  Q
    | ||| || ||| |||||||||||||||| |||| ||||||  ||||| |||||||||||    
T  24229815 agatctacatcaatcaattacaaattcaagcaatgatttggacgtcaatgttgcagatcc 24229756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 124 - 270
Target Start/End: Original strand, 10722737 - 10722883
Alignment:
Q  124 agtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaaatatcaacttcagtcaatt 223  Q
    |||||||||||||  ||||  || |||||||||| ||||||||| |||| ||      ||||||||||| |||||||||||| ||| |||||||||| ||    
T  10722737 agtgcgacgttgtcctgtttgtcgtcttgtgcggcgtttgattttgtgtcttatctcggtgttcgtttagttcctattgaaagatcgacttcagtcattt 10722836  T
Q  224 acaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    | ||||||||||||| ||||||| |||||||||| ||||||| ||||    
T  10722837 aaaaattcaatcaatgatttgggcgtcaacgttgtagatccaaaagc 10722883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 122 - 268
Target Start/End: Complemental strand, 37986227 - 37986081
Alignment:
Q  122 tgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaaatatcaacttcagtcaa 221  Q
    |||||||| |||||||||||||||| |||||||||| |||||||||||  | ||| ||  | |||||||| |||| |||||||| ||||||||  ||||     
T  37986227 tgagtgcggcgttgtgttgttcatcgtcttgtgcggcgtttgatttcgcatcttgttgcggcgttcgtttgattcttattgaaagatcaacttttgtcat 37986128  T
Q  222 ttacaaattcaatcaataatttgggtgtcaacgttgcagatccagaa 268  Q
    ||||| ||||||||||| ||||| ||||| | ||| ||| |||||||    
T  37986127 ttacagattcaatcaatgatttgagtgtcgaagttacaggtccagaa 37986081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 105 - 264
Target Start/End: Original strand, 7036176 - 7036335
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||||||||| |||| ||| |||||  |  || |||||||||| ||||||||||| || |||   | ||||||||||| ||| | || ||    
T  7036176 tttgtgatttcgtcgtctgattgcggcgtggtgttagtggtcgtcttgtgcggcgtttgatttcgcgtcttgtcatggtgttcgtttagttcatgttaaa 7036275  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatcc 264  Q
    | ||| || | ||||||||||||||| |||| || ||||||| |||||||||||||||||    
T  7036276 agatcgacataagtcaattacaaattgaatctatgatttgggcgtcaacgttgcagatcc 7036335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 183 - 270
Target Start/End: Original strand, 15571521 - 15571608
Alignment:
Q  183 tgttcgtttaattcctattgaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    |||||||||| || ||||||||| ||| |||| ||| || |||||||||||||||| ||||||||||||||||||||||||| |||||    
T  15571521 tgttcgtttagttactattgaaagatcgactttagtaaactacaaattcaatcaatgatttgggtgtcaacgttgcagatccggaagc 15571608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 159 - 270
Target Start/End: Complemental strand, 26878185 - 26878074
Alignment:
Q  159 gtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgc 258  Q
    |||||||||||||| |||  |  |||||||||||||| || |||||| ||| || ||||||||||| | ||||||||||| ||||||| |||||| ||||    
T  26878185 gtttgatttcgtgtcttgtcgcggtgttcgtttaatttctcttgaaagatcgacatcagtcaattagatattcaatcaatgatttgggcgtcaacattgc 26878086  T
Q  259 agatccagaagc 270  Q
    ||||||||||||    
T  26878085 agatccagaagc 26878074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 148 - 270
Target Start/End: Original strand, 34945393 - 34945515
Alignment:
Q  148 tcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaaatatcaacttcagtcaattacaaattcaatcaataatttgggt 247  Q
    ||||||||||  |||||||||| ||||||  |  ||||| ||| | |||||||||||| ||| || |||||||||||||||||||| |||| ||||||      
T  34945393 tcttgtgcggcatttgatttcgcgttttgtcgcggtgtttgttcagttcctattgaaagatctacatcagtcaattacaaattcaaccaatgatttggac 34945492  T
Q  248 gtcaacgttgcagatccagaagc 270  Q
    ||||||||||||||||| |||||    
T  34945493 gtcaacgttgcagatccggaagc 34945515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 105 - 262
Target Start/End: Original strand, 6216856 - 6217012
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||||||| | |||| |||| |||||||| || ||||||||||  ||||||||    | |||  |  ||||| ||||| || ||||||||    
T  6216856 tttgtgatttcgtcgtctaaatgcggcgttatgttgttcgtcgtcttgtgcggcatttgatttaca-tcttgtcgcagtgtttgtttagtttctattgaa 6216954  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagat 262  Q
    | ||| || ||| ||||||||||||||||||||| ||||||| |||||||||||||||    
T  6216955 agatctacatcaatcaattacaaattcaatcaatgatttgggcgtcaacgttgcagat 6217012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 108 - 270
Target Start/End: Complemental strand, 19103602 - 19103433
Alignment:
Q  108 gtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcgg---tgtttgatttcgtgt--tttggtgtt--gtgttcgtttaattcctat 200  Q
    ||||||||||||||| |||||||||||||||||||  || ||||||||||   |||||||||||   |  |||| |||   |||||||||| |||| |||    
T  19103602 gtgatttcgtcgtcttagtgcgacgttgtgttgttagtcgtcttgtgcggcgttgtttgatttcacatcatttgttgtgcggtgttcgtttgattcgtat 19103503  T
Q  201 tgaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
     |||| || | |||||| |||| ||||||||||||||| ||||||| |||||  ||||||||||||||||    
T  19103502 cgaaagattagcttcagacaatcacaaattcaatcaatgatttgggcgtcaatattgcagatccagaagc 19103433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 119 - 270
Target Start/End: Original strand, 7930148 - 7930299
Alignment:
Q  119 gtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaaatatcaacttcagt 218  Q
    |||| |||||| ||||||||||||| || |||||||||  |||||||||||  | | |  |  ||||| ||||| ||||||| |||| ||| || |||||    
T  7930148 gtctaagtgcggcgttgtgttgttcgtcgtcttgtgcgtcgtttgatttcgcatctggtcgcagtgtttgtttagttcctatggaaagatcgacgtcagt 7930247  T
Q  219 caattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    ||||||||||||||| |||| ||||| | ||||| ||||||||||| |||||    
T  7930248 caattacaaattcaaccaatgatttgagcgtcaatgttgcagatccggaagc 7930299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 108 - 270
Target Start/End: Complemental strand, 35921127 - 35920962
Alignment:
Q  108 gtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtg---cggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||||||||||||| || | |||||| || |||| ||   || |||||||||||| || ||| ||  |||||| |||  |||||||| ||    
T  35921127 gtgatttcgtcgtctgagtgcgacattatattgttcgtcgtcttatgagacgttgtttgatttcgcgtcttgttgcggtgttcatttgtttcctattaaa 35921028  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    | ||||| |||| ||||| ||| ||||||||||| |||||   ||||||||||||||||| |||||    
T  35921027 agatcaaattcaatcaatcacagattcaatcaatgatttgaacgtcaacgttgcagatccggaagc 35920962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 117 - 265
Target Start/End: Complemental strand, 8088333 - 8088183
Alignment:
Q  117 tcgtctgagtgcgacgttgtgttgttcatcctcttgtgcgg---tgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaaatatcaact 213  Q
    |||||| |||||||| |||||||||| ||| ||||||||||   |||||||||| |  | ||| ||  |||||||||   ||| |||||||| |||| ||    
T  8088333 tcgtctaagtgcgaccttgtgttgtttatcgtcttgtgcggcgttgtttgatttggcatcttgttgcagtgttcgttgg-ttcatattgaaagatcagct 8088235  T
Q  214 tcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatcca 265  Q
    ||||||||| ||| ||||||||||| ||||||  ||||||||||||||||||    
T  8088234 tcagtcaatcacagattcaatcaatgatttggacgtcaacgttgcagatcca 8088183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 181 - 262
Target Start/End: Complemental strand, 9591026 - 9590945
Alignment:
Q  181 tgtgttcgtttaattcctattgaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagat 262  Q
    |||||||||||| ||| ||||||||||||  | | ||||||||||||||||||||||||||||| |||| ||||||| ||||    
T  9591026 tgtgttcgtttagttcttattgaaatatcggcataagtcaattacaaattcaatcaataatttgagtgttaacgttgtagat 9590945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 105 - 263
Target Start/End: Complemental strand, 11977066 - 11976908
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||||||| |||| | |||||| |||||| || |||||| ||  ||||||||||| || |||  |  ||||| ||||| || |||||||     
T  11977066 tttgtgatttcgtcgtctaagtgtggcgttgtattgttcgtcgtcttgtacgacgtttgatttcgcgtcttgtcgcggtgtttgtttattttctattgag 11976967  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatc 263  Q
    | |||  | |||||||||||||||||||| |||| ||||||  || ||||||| |||||    
T  11976966 agatcggcatcagtcaattacaaattcaaccaatgatttggacgtgaacgttgaagatc 11976908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 105 - 233
Target Start/End: Original strand, 11867625 - 11867753
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||||||| | |||   |||||||||||  || |||||| ||| ||||||||||| || |||  |   |||||||||| |||||||| ||    
T  11867625 tttgtgatttcgtcgtctaattgcagtgttgtgttgttagtcgtcttgtacggcgtttgatttcgcgtcttgtcgcattgttcgtttagttcctattaaa 11867724  T
Q  205 atatcaacttcagtcaattacaaattcaa 233  Q
    | ||| || ||||||||||||||||||||    
T  11867725 agatcgacatcagtcaattacaaattcaa 11867753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 107 - 261
Target Start/End: Complemental strand, 8096626 - 8096472
Alignment:
Q  107 tgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaaat 206  Q
    ||||||||| |||||| |||||| ||||||||||||| |  | ||| ||||  |||||||||| || |||  |  ||||||||||| ||||||||||||     
T  8096626 tgtgatttcatcgtctaagtgcggcgttgtgttgttcgttgttttgagcggcatttgatttcgcgtcttgtcgcggtgttcgtttagttcctattgaaag 8096527  T
Q  207 atcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcaga 261  Q
    ||   | ||| |||||||||| ||||| |||| ||||| | |||||| |||||||    
T  8096526 attggcatcaatcaattacaatttcaaccaatgatttgagcgtcaacattgcaga 8096472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 199 - 268
Target Start/End: Original strand, 39567321 - 39567390
Alignment:
Q  199 attgaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaa 268  Q
    ||||||| |||| |||||| |||| ||||||||||||||| ||||||  |||||| ||||||||||||||    
T  39567321 attgaaagatcagcttcagacaatcacaaattcaatcaatgatttggacgtcaacattgcagatccagaa 39567390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 27 - 83
Target Start/End: Original strand, 38007243 - 38007299
Alignment:
Q  27 catctttttcccctttcttttaatttaaattagtggatttcacacatatcaaatttt 83  Q
    |||||||||||| ||||||| ||||||||| ||||| ||||||||||||||| ||||    
T  38007243 catctttttcccttttctttcaatttaaataagtggttttcacacatatcaagtttt 38007299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 264
Target Start/End: Original strand, 1409533 - 1409614
Alignment:
Q  183 tgttcgtttaattcctattgaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatcc 264  Q
    |||||||||| ||| |||| ||| ||| || ||| ||||||||||||||||||||| ||||  | ||||| |||||||||||    
T  1409533 tgttcgtttagttcatattaaaagatcgacatcaatcaattacaaattcaatcaatgatttatgcgtcaatgttgcagatcc 1409614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 105 - 170
Target Start/End: Complemental strand, 14082504 - 14082439
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgt 170  Q
    ||||||||||| |||||| |||| | ||||||||||||| || |||||| ||| ||||||||||||    
T  14082504 tttgtgatttcatcgtctaagtgtggcgttgtgttgttcgtcgtcttgtacggcgtttgatttcgt 14082439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 143
Target Start/End: Complemental strand, 22397566 - 22397528
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttc 143  Q
    |||||||||||||||||| ||||||||||||| ||||||    
T  22397566 tttgtgatttcgtcgtcttagtgcgacgttgttttgttc 22397528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 143
Target Start/End: Original strand, 28386892 - 28386930
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttc 143  Q
    |||||||||||||||||| |||||| |||||||||||||    
T  28386892 tttgtgatttcgtcgtctaagtgcggcgttgtgttgttc 28386930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 169
Target Start/End: Original strand, 39567255 - 39567319
Alignment:
Q  108 gtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcgg---tgtttgatttcg 169  Q
    ||||| ||||||||| |||||||||||||||||||| |  ||||||||||   ||||||||||||    
T  39567255 gtgatctcgtcgtcttagtgcgacgttgtgttgttcgttgtcttgtgcggcgttgtttgatttcg 39567319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 124 - 268
Target Start/End: Original strand, 19120886 - 19121032
Alignment:
Q  124 agtgcgacgttgtgttgttcatcctcttgtgcgg---tgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaaatatcaacttcagtca 220  Q
    |||||| ||||||||||||| || |||| || ||   |||||||||||| || ||| ||  ||||| ||||  ||||| |||||  |||| |||||||||    
T  19120886 agtgcggcgttgtgttgttcgtcgtcttatgaggcattgtttgatttcgcgtcttgttgcggtgtttgtttgtttccttttgaag-atcagcttcagtca 19120984  T
Q  221 attacaaattcaatcaataatttgggtgtcaacgttgcagatccagaa 268  Q
    ||||||||||| |||||| | ||  | ||||||| |||||||| ||||    
T  19120985 attacaaattctatcaatgacttaagcgtcaacgctgcagatctagaa 19121032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 106 - 143
Target Start/End: Original strand, 20270811 - 20270848
Alignment:
Q  106 ttgtgatttcgtcgtctgagtgcgacgttgtgttgttc 143  Q
    ||||||||||||||||| ||||||||||||| ||||||    
T  20270811 ttgtgatttcgtcgtcttagtgcgacgttgttttgttc 20270848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 243
Target Start/End: Original strand, 31315942 - 31316003
Alignment:
Q  182 gtgttcgtttaattcctattgaaatatcaacttcagtcaattacaaattcaatcaataattt 243  Q
    ||||| |||| |||| |||||||| |||| ||||| ||||| ||| ||||||||||||||||    
T  31315942 gtgtttgtttgattcatattgaaagatcagcttcaatcaataacatattcaatcaataattt 31316003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 243
Target Start/End: Original strand, 41749360 - 41749421
Alignment:
Q  182 gtgttcgtttaattcctattgaaatatcaacttcagtcaattacaaattcaatcaataattt 243  Q
    |||||||||| ||||||||||| | | |||||||| |||||| || ||||||||||| ||||    
T  41749360 gtgttcgtttgattcctattgagagaccaacttcaatcaattccagattcaatcaatgattt 41749421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 82; Significance: 9e-39; HSPs: 67)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 105 - 270
Target Start/End: Original strand, 1415525 - 1415690
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||||||| ||| |||||||||||||||| || |||||||||| ||||||||||| ||||||  |  ||||| ||||| |||||||||||    
T  1415525 tttgtgatttcgtcgtctaagtacgacgttgtgttgttcttcgtcttgtgcggcgtttgatttcgcgttttgtcgcggtgtttgtttatttcctattgaa 1415624  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    | |||  | |||||||||||||||||||| |||| ||||||| |||||||||| |||||| |||||    
T  1415625 agatcggcatcagtcaattacaaattcaaccaatgatttgggcgtcaacgttgaagatccggaagc 1415690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 111 - 264
Target Start/End: Complemental strand, 30400161 - 30400008
Alignment:
Q  111 atttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaaatatca 210  Q
    |||||||||||| |||||||| ||||||||||| || ||||||||||  |||||||| |  |  ||  |  ||||||||||| |||||||||||| ||||    
T  30400161 atttcgtcgtctaagtgcgacattgtgttgttcttcgtcttgtgcggcatttgattttgcatcgtgtcgcggtgttcgtttagttcctattgaaagatca 30400062  T
Q  211 acttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatcc 264  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  30400061 acttcagtcaattacaaattcaatcaatgatttgggcgtcaacgttgcagatcc 30400008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 105 - 270
Target Start/End: Complemental strand, 4904277 - 4904112
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||||||  |||| | ||||||||||||| || |||||||||  ||||||||| |||| ||| ||  ||||||||||  ||| |||||||    
T  4904277 tttgtgatttcgtcgtcaaagtgtggcgttgtgttgttcgtcgtcttgtgcgacgtttgattttgtgtcttgttgcggtgttcgtttggttcatattgaa 4904178  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    | ||| || ||||||||||||||||||||   || |||||||||||||||||||||||||||||||    
T  4904177 agatcgacatcagtcaattacaaattcaactgatgatttgggtgtcaacgttgcagatccagaagc 4904112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 105 - 270
Target Start/End: Original strand, 33923673 - 33923838
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    ||||||||||||| |||| ||| ||| ||| |||||||| || |||||||||| ||||||||||| |||||   || ||||| ||||| |||||||||||    
T  33923673 tttgtgatttcgttgtctaagtacgatgttctgttgttcgtcgtcttgtgcggcgtttgatttcgcgttttatcgtggtgtttgtttatttcctattgaa 33923772  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    | ||| || |||||||||||||||||||| |||| ||||||| |||||||||| |||||| |||||    
T  33923773 agatcgacatcagtcaattacaaattcaaccaatgatttgggcgtcaacgttgaagatccggaagc 33923838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 105 - 263
Target Start/End: Original strand, 35220293 - 35220451
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||||||| |||||| | || ||||||||||| |||||||||| ||||||||| | ||||||     |||||| |||| |||||||||||    
T  35220293 tttgtgatttcgtcgtctaagtgcggcattatgttgttcatcgtcttgtgcggcgtttgattttgcgttttgtcacggtgttcatttagttcctattgaa 35220392  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatc 263  Q
    | |||||| |||||| ||||||||||||| |||| ||||||| |||||| |||||||||    
T  35220393 agatcaacatcagtccattacaaattcaaccaatgatttgggcgtcaactttgcagatc 35220451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 32 - 252
Target Start/End: Original strand, 4264375 - 4264587
Alignment:
Q  32 ttttcccctttcttttaatttaaattagtggatttcacacatatcaaattttacattttgtgcnnnnnnnnngtttgtgatttcgtcgtctgagtgcgac 131  Q
    |||| |||||||||||||||||||| ||||| ||||||| ||||||| |||| |||||||||           ||||||||||||||||| ||||| ||     
T  4264375 tttttccctttcttttaatttaaataagtggttttcacatatatcaagtttttcattttgtgttt--------tttgtgatttcgtcgtcggagtgagat 4264466  T
Q  132 gttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaaatatcaacttcagtcaattacaaattc 231  Q
    |||| ||||||| || |||||||||||||||||||||| || ||  ||  |||||| |||  ||| |||||||| |||||||||||||||||||| |||     
T  4264467 gttgcgttgttcgtcgtcttgtgcggtgtttgatttcgcgtcttattgcggtgttcatttggttcttattgaaagatcaacttcagtcaattacagattt 4264566  T
Q  232 aatcaataatttgggtgtcaa 252  Q
    ||||||| |||| || |||||    
T  4264567 aatcaatgatttaggagtcaa 4264587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 105 - 270
Target Start/End: Original strand, 38445134 - 38445299
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||||||| |||||  ||||||||||||| || |||||||||| ||||||||||| |||||   |  ||||| ||| | |||||||||||    
T  38445134 tttgtgatttcgtcgtctaagtgcagcgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgttttatcgcggtgtttgttcagttcctattgaa 38445233  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    | ||| || ||||| |||||||||||||| |||| ||||||  ||||||||||||||||| |||||    
T  38445234 agatctacatcagtaaattacaaattcaaccaatgatttggacgtcaacgttgcagatccggaagc 38445299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 107 - 270
Target Start/End: Original strand, 7646443 - 7646611
Alignment:
Q  107 tgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaaat 206  Q
    |||||||||||||||| |||||| |||| |||||||| || |||||||||| ||||||||||| ||||||  || ||||| ||| ||||| | ||||||     
T  7646443 tgtgatttcgtcgtctaagtgcggcgttatgttgttcgtcgtcttgtgcggcgtttgatttcgcgttttgtcgtggtgtttgttcaattctttttgaaag 7646542  T
Q  207 atcaacttcagtcaattacaaattcaatcaa-----taatttgggtgtcaacgttgcagatccagaagc 270  Q
    ||| || ||||||||||||||||||||||||     ||||||||  ||||||||||||||||| |||||    
T  7646543 atctacatcagtcaattacaaattcaatcaatgatttaatttggacgtcaacgttgcagatccggaagc 7646611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 105 - 264
Target Start/End: Complemental strand, 36943253 - 36943094
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||||||| |||||| ||||||||||||| || |||||||||| ||||||||||| || |||  |  ||||| ||||| |||| ||||||    
T  36943253 tttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgtattgtcgcggtgtttgtttagttccaattgaa 36943154  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatcc 264  Q
    | ||| || | |||| ||||||||||| | |||| ||||||| |||||||||||||||||    
T  36943153 agatctacattagtcgattacaaattccaccaatgatttgggcgtcaacgttgcagatcc 36943094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 105 - 270
Target Start/End: Original strand, 7448215 - 7448380
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    ||||||||||||| |||| |||||| ||||||||||||| || |||||||||| ||||||||||| ||||||  |   |||| ||| | | ||| |||||    
T  7448215 tttgtgatttcgttgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgttttgtcgcgatgtttgttcagtgcctcttgaa 7448314  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    | ||| || ||||||||||||| |||||| |||||||||||  ||||||||||||||||| |||||    
T  7448315 agatctacatcagtcaattacatattcaaccaataatttggacgtcaacgttgcagatccggaagc 7448380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 105 - 249
Target Start/End: Complemental strand, 12554313 - 12554169
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||| |||||||||||||| ||||||||||| | ||  ||||||||   ||| |||| |||| | | ||  |||||||||| |||| |||||||    
T  12554313 tttgtgattttgtcgtctgagtgcggcgttgtgttgtccgtcaccttgtgcgacatttaattttgtgtctagttgcggtgttcgtttgattcatattgaa 12554214  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgt 249  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||    
T  12554213 atatcaacttcagtcaattacagattcaatcaatgatttgggtgt 12554169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 107 - 270
Target Start/End: Complemental strand, 19029044 - 19028881
Alignment:
Q  107 tgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaaat 206  Q
    |||||||||||||||| ||| || ||||||||| ||| || || |||||||  |||||||||| || |||     |||||| |||| ||||||||||||     
T  19029044 tgtgatttcgtcgtctaagttcggcgttgtgttattcgtcgtcatgtgcggcatttgatttcgcgtcttgtctcggtgttcatttagttcctattgaaag 19028945  T
Q  207 atcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    ||| ||||||||||| |||||||||||||||| ||||| | |||||||||||| ||||||||||    
T  19028944 atcgacttcagtcaagtacaaattcaatcaatgatttgagcgtcaacgttgcaaatccagaagc 19028881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 108 - 270
Target Start/End: Complemental strand, 10237352 - 10237183
Alignment:
Q  108 gtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtt---tgatttcg--tgttttggtgtt--gtgttcgtttaattcctat 200  Q
    ||||||||||||||| |||||||||||||||||||| || |||||||| | |||   ||||||||  | ||||| |||   ||||||||||  ||| |||    
T  10237352 gtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtcttgtgcagcgttctttgatttcgcatcttttgttgtgcagtgttcgtttggttcgtat 10237253  T
Q  201 tgaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    ||||| |||| |||||| |||| ||||||||||||||| ||||||  |||||||||||||||||||||||    
T  10237252 tgaaagatcagcttcagacaatcacaaattcaatcaatgatttggacgtcaacgttgcagatccagaagc 10237183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 105 - 270
Target Start/End: Original strand, 18763436 - 18763601
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    ||||||||||| |||||| ||||||  |||||||||||| || |||||||||| ||||||||||| || ||      ||||||||||| |||||||||||    
T  18763436 tttgtgatttcatcgtctaagtgcggtgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgtcttatcacggtgttcgtttagttcctattgaa 18763535  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    | |||  | ||| |||||||||||||||| |||| ||||||| ||||||||| ||||||| |||||    
T  18763536 agatcggcatcaatcaattacaaattcaaccaatcatttgggcgtcaacgttacagatccggaagc 18763601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 105 - 264
Target Start/End: Complemental strand, 7678005 - 7677846
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||||||| |||||| ||||||||||||| || |||||||||| ||||||||||| || ||      ||||| ||| | |||||||||||    
T  7678005 tttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgtcttatctcggtgtttgttcagttcctattgaa 7677906  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatcc 264  Q
    | ||| || ||| |||||||||||||||| |||| ||||||   ||||||||||||||||    
T  7677905 agatctacatcaatcaattacaaattcaagcaatgatttggacatcaacgttgcagatcc 7677846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 108 - 270
Target Start/End: Complemental strand, 29574760 - 29574595
Alignment:
Q  108 gtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcgg---tgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||| ||||||| ||||||||||||| || ||||||||||   |||||||||||   ||||| ||  ||||| |||| |||| |||||||    
T  29574760 gtgatttcgtcgtccgagtgcggcgttgtgttgttcgtcgtcttgtgcggcattgtttgatttcacattttgttgcagtgtttgtttgattcatattgaa 29574661  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    | || | ||||||||||| ||| ||||||||||| ||||||  | ||||||||||||||| |||||    
T  29574660 agattagcttcagtcaatcacagattcaatcaatgatttggacgccaacgttgcagatccggaagc 29574595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 105 - 264
Target Start/End: Complemental strand, 37876738 - 37876579
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||| ||||||| |||||| |||| |||||||| || ||||||||||  |||||||||| || |||  |  ||||| ||||| ||||||||| |    
T  37876738 tttgtgatttggtcgtctaagtgcggcgttttgttgttcgtcgtcttgtgcggcatttgatttcgcgtcttgtcgcggtgtttgtttagttcctattgga 37876639  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatcc 264  Q
    | ||| || |||||||||||||||||||| |||| | |||||  ||||||||||||||||    
T  37876638 agatctacatcagtcaattacaaattcaaccaatgacttgggcatcaacgttgcagatcc 37876579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 109 - 263
Target Start/End: Complemental strand, 27097534 - 27097380
Alignment:
Q  109 tgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaaatat 208  Q
    |||||||||||||| |||||| ||||||||||||| || ||||||||||  |||||||||   |||||  |  ||||| ||| | ||||| |||||| ||    
T  27097534 tgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcatttgatttcaccttttgtcgcggtgtttgttcagttcctcttgaaagat 27097435  T
Q  209 caacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatc 263  Q
    | || |||||||||||||||||||| |||| ||||||  ||||||||||||||||    
T  27097434 ctacatcagtcaattacaaattcaaccaatgatttggacgtcaacgttgcagatc 27097380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 109 - 263
Target Start/End: Complemental strand, 31210735 - 31210581
Alignment:
Q  109 tgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaaatat 208  Q
    |||||||||||||| |||||| ||||||||||||  |  |||||||||| ||||||||||| || ||   || ||||| ||| | |||||||||||| ||    
T  31210735 tgatttcgtcgtctaagtgcggcgttgtgttgtttgttgtcttgtgcggcgtttgatttcgcgtcttatcgtggtgtttgttcagttcctattgaaagat 31210636  T
Q  209 caacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatc 263  Q
    | || ||| |||||||||||||||| |||| ||||||  ||||||||||||||||    
T  31210635 ctacatcaatcaattacaaattcaagcaatgatttggacgtcaacgttgcagatc 31210581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 105 - 270
Target Start/End: Complemental strand, 32448753 - 32448586
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcgg---tgtttgatttcgtgttttggtgttgtgttcgtttaattcctatt 201  Q
    |||||||||||||||||| |||||||| ||||||||||| || |||||||||    |||||||||| |  | ||| ||  |||||||||   ||| ||||    
T  32448753 tttgtgatttcgtcgtctaagtgcgaccttgtgttgttcgtcgtcttgtgcgccgttgtttgatttggcatcttgttgcggtgttcgttgg-ttcatatt 32448655  T
Q  202 gaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    |||| |||| ||||||||||| ||| ||||||||||| ||||||  |||||||||||||||||||||||    
T  32448654 gaaagatcagcttcagtcaatcacagattcaatcaatgatttggacgtcaacgttgcagatccagaagc 32448586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 108 - 270
Target Start/End: Original strand, 3308909 - 3309078
Alignment:
Q  108 gtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcgg---tgtttgatttcgtgt--tttggtgtt--gtgttcgtttaattcctat 200  Q
    ||||||||||||||| |||||||||||||||| ||  || ||||||||||   |||||||||| |  |  |||| |||   ||||||||||  ||  |||    
T  3308909 gtgatttcgtcgtcttagtgcgacgttgtgttatttgtcgtcttgtgcggcgttgtttgatttagcatcctttgttgtgcggtgttcgtttggtttgtat 3309008  T
Q  201 tgaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    ||||||||||||||||| |||| ||||||||||||||| ||||||| || ||||||||||||||||||||    
T  3309009 tgaaatatcaacttcagacaatcacaaattcaatcaatgatttgggcgttaacgttgcagatccagaagc 3309078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 109 - 270
Target Start/End: Original strand, 4778725 - 4778886
Alignment:
Q  109 tgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaaatat 208  Q
    |||||||||||| | |||||| ||||||||| ||| || |||||||| | ||||||||||| |||||   |  |||||  || ||||||| |||||| ||    
T  4778725 tgatttcgtcgtttaagtgcggcgttgtgttattcgtcgtcttgtgcagcgtttgatttcgcgttttctcgcggtgtttattcaattcctcttgaaagat 4778824  T
Q  209 caacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    | || |||||||||||||||||||| |||| ||||||  ||||||||||||||||| |||||    
T  4778825 ctacatcagtcaattacaaattcaaccaatgatttggacgtcaacgttgcagatccggaagc 4778886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 113 - 270
Target Start/End: Original strand, 17151399 - 17151556
Alignment:
Q  113 ttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaaatatcaac 212  Q
    ||||||||||||||| ||||||| | | ||  || |||||||| | |||||||||||  | ||| |   |||||||||| ||||||||||||| |||||     
T  17151399 ttcgtcgtctgagtgtgacgttgaggtttttgtcgtcttgtgcagcgtttgatttcgcatcttgttacggtgttcgtttgattcctattgaaagatcaat 17151498  T
Q  213 ttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    |||||||||||||| ||||||||||| ||||||| ||| |||||| |||||| |||||    
T  17151499 ttcagtcaattacagattcaatcaatgatttgggcgtcgacgttgtagatccggaagc 17151556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 131 - 264
Target Start/End: Complemental strand, 25509174 - 25509041
Alignment:
Q  131 cgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaaatatcaacttcagtcaattacaaatt 230  Q
    ||||||||||||  || |||||||||  ||||||||| |||| |||  |  ||||||||||| |||| ||||||| |||||| |||||||||||||||||    
T  25509174 cgttgtgttgttattcgtcttgtgcgacgtttgattttgtgtcttgtcgcggtgttcgtttagttcccattgaaagatcaacatcagtcaattacaaatt 25509075  T
Q  231 caatcaataatttgggtgtcaacgttgcagatcc 264  Q
    |||||||| || |||| |||||||||||| ||||    
T  25509074 caatcaatgatctgggcgtcaacgttgcaaatcc 25509041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 105 - 270
Target Start/End: Complemental strand, 31128912 - 31128747
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||| | | | |||| ||||||||||||  || ||||||| || |||||||| ||  | |||  |  ||||||||||| |||||||||||    
T  31128912 tttgtgatttcgtcatttaattgcggcgttgtgttgttagtcgtcttgtgtggcgtttgattccgcttcttgtcgcggtgttcgtttagttcctattgaa 31128813  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    | ||| |  ||||||||||||||||||||||||| |||| || ||||||||||||||||| |||||    
T  31128812 aaatcgatatcagtcaattacaaattcaatcaatgatttaggcgtcaacgttgcagatccggaagc 31128747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 105 - 264
Target Start/End: Complemental strand, 19062484 - 19062325
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||| ||||||||| |||||  ||||||||||||| || ||||||||||  |||||||||  || |||     ||||| ||| ||||||| |||||    
T  19062484 tttgtgatatcgtcgtctaagtgcagcgttgtgttgttcgtcgtcttgtgcggcatttgatttcacgtcttgtcacagtgtttgttcaattcctgttgaa 19062385  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatcc 264  Q
    | ||| || ||||||||||||||||||||||||| ||||||  ||||||||| |||||||    
T  19062384 agatctacatcagtcaattacaaattcaatcaatgatttggacgtcaacgtttcagatcc 19062325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 105 - 264
Target Start/End: Complemental strand, 29173851 - 29173693
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||||||| |||||| |||||||||||||||| |||| |   |  | |||||| | || ||   |  ||||||||||| |||||||||||    
T  29173851 tttgtgatttcgtcgtctaagtgcggcgttgtgttgttcatcgtcttatattgcatgtgattttgcgtcttatcgcagtgttcgtttagttcctattgaa 29173752  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatcc 264  Q
    |  || || ||| ||||||||||||||||||||| |||||||||||||||||||||||||    
T  29173751 agctcgacatca-tcaattacaaattcaatcaattatttgggtgtcaacgttgcagatcc 29173693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 105 - 269
Target Start/End: Complemental strand, 11985362 - 11985201
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||||||| |||||| | ||||||||||  |  |||||||||| ||||||||| | || |||  |  |||||| |||| |||||||||||    
T  11985362 tttgtgatttcgtcgtctaagtgcggctttgtgttgtttgttgtcttgtgcggcgtttgattttgcgtcttgtcgcggtgttcatttagttcctattgaa 11985263  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaag 269  Q
    | | | ||   ||||||||||||| |||| |||| |||| |||||||||||||||||||||||||    
T  11985262 agagcgac---agtcaattacaaactcaaccaatgatttaggtgtcaacgttgcagatccagaag 11985201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 105 - 268
Target Start/End: Original strand, 14955490 - 14955660
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcgg---tgtttgatttcgtgt--tttggtgtt--gtgttcgtttaattcc 197  Q
    |||||||||| ||||||| | ||||||||||||||||||||| | ||||||||   ||||||||||||  |  |||| |||   ||||||||||  |||     
T  14955490 tttgtgattttgtcgtcttaatgcgacgttgtgttgttcatcattttgtgcggcgttgtttgatttcgcatcctttgttgtgcggtgttcgtttggttca 14955589  T
Q  198 tattgaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaa 268  Q
    ||||||||||||| ||||||  ||| | ||||||||||||| ||||| | |||||||||||||||||||||    
T  14955590 tattgaaatatcatcttcagataatcataaattcaatcaatgatttgagcgtcaacgttgcagatccagaa 14955660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 105 - 270
Target Start/End: Original strand, 1421644 - 1421809
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||||||| ||||||  ||| |||||||| || |||||||| | ||||||||||| || |||  |  ||||| ||  | || ||||||||    
T  1421644 tttgtgatttcgtcgtctaagtgcggtgttatgttgttcgtcgtcttgtgcagcgtttgatttcgcgtcttgtcgcggtgtttgtccagtttctattgaa 1421743  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    | ||| || ||| |||||||||||||||| |||| ||||||  ||||||||||||||||| |||||    
T  1421744 agatctacatcaatcaattacaaattcaagcaatgatttggacgtcaacgttgcagatccggaagc 1421809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 105 - 270
Target Start/End: Original strand, 8809248 - 8809413
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    ||||| |||||||||||| | |||||||| ||||||||  || ||||||||||   ||||||||| || |||  |  |||||||  || |||||||||||    
T  8809248 tttgtaatttcgtcgtctaattgcgacgtcgtgttgttagtcgtcttgtgcggcaattgatttcgcgtcttgtcgcggtgttcgcatagttcctattgaa 8809347  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    | ||| || |||||||||||||| |||||||||| ||||||| | |||| |||||||||| |||||    
T  8809348 agatcgacatcagtcaattacaagttcaatcaatgatttgggcgccaacattgcagatccggaagc 8809413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 105 - 264
Target Start/End: Complemental strand, 42698832 - 42698674
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    ||||||||||| |||||| |||||||||||||||||||| || ||||||| || ||||||||| | || |||  |   |||| ||||| || ||||||||    
T  42698832 tttgtgatttcatcgtct-agtgcgacgttgtgttgttcgtcgtcttgtgtggcgtttgattttgcgtcttgtcgcaatgtttgtttagtttctattgaa 42698734  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatcc 264  Q
    | ||| || ||||| ||||||||||||||||| | ||||||  |||| ||||||||||||    
T  42698733 agatcgacatcagtgaattacaaattcaatcagtgatttggacgtcagcgttgcagatcc 42698674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 105 - 270
Target Start/End: Complemental strand, 9169390 - 9169225
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||||||| |||||| ||||||||||||| |  |||||||||  ||||||||||  ||||||  |   |||| |||   ||||| |||||    
T  9169390 tttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgttgtcttgtgcgtcgtttgatttcacgttttgccgcgatgtttgttcggttcctcttgaa 9169291  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    | ||| || ||||| ||||||||||||||  ||| ||||||  ||||||||||||||||| |||||    
T  9169290 agatctacatcagtgaattacaaattcaacgaatgatttggacgtcaacgttgcagatccggaagc 9169225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 105 - 269
Target Start/End: Complemental strand, 5428000 - 5427837
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||||||  |||||| |||| |||||||| || ||||||| || ||||||||||| || |||  |  ||||| ||||| ||| ||||| |    
T  5428000 tttgtgatttcgtcgtccaagtgcggcgttttgttgttcgtcgtcttgtgtggcgtttgatttcgcgtcttgtcgcggtgtttgtttagttcatattgga 5427901  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaag 269  Q
    | ||| || |||||||| ||||||||||| |||| | ||| | ||||||||||||||||| ||||    
T  5427900 agatctacatcagtcaa-tacaaattcaaccaatgacttgtgcgtcaacgttgcagatccggaag 5427837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 152 - 268
Target Start/End: Complemental strand, 28871873 - 28871757
Alignment:
Q  152 gtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtca 251  Q
    |||||| ||||||||||| || |||  |  ||||||||||  |||||||||||| |||||||||||||||||||| |||||| |||| |||| || |||     
T  28871873 gtgcggcgtttgatttcgcgtcttgtcgcggtgttcgtttggttcctattgaaagatcaacttcagtcaattacagattcaaccaatgatttaggcgtcg 28871774  T
Q  252 acgttgcagatccagaa 268  Q
    ||||||||||| |||||    
T  28871773 acgttgcagattcagaa 28871757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 108 - 259
Target Start/End: Complemental strand, 6359005 - 6358849
Alignment:
Q  108 gtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcgg---tgtttgatttcgtgttttggtgtt--gtgttcgtttaattcctattg 202  Q
    ||||||| |||||||||||| | ||||||||||||| || |||||||| |   ||||||||||||  | ||| |||   ||||| ||||  ||| |||||    
T  6359005 gtgattttgtcgtctgagtgtgtcgttgtgttgttcgtcgtcttgtgcagcgttgtttgatttcgcatcttgttgtacggtgtttgtttggttcttattg 6358906  T
Q  203 aaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgca 259  Q
    ||| ||||||||||| || | |||||||||||| |||||||||| ||||||||||||    
T  6358905 aaagatcaacttcagacagtcacaaattcaatctataatttgggcgtcaacgttgca 6358849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 105 - 264
Target Start/End: Original strand, 31788425 - 31788583
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    ||||| |||||||||||| ||||||||||| |||||||| |  |||||||||| ||||||||| |  | |||  |  ||||| ||| | |||||||||||    
T  31788425 tttgtaatttcgtcgtctaagtgcgacgttttgttgttcgttgtcttgtgcggcgtttgattt-gcatcttgtcgcggtgtttgttcagttcctattgaa 31788523  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatcc 264  Q
    | ||| |  ||| |||||||||||||||| |||| ||||||  |||||||||||||||||    
T  31788524 agatctatatcaatcaattacaaattcaagcaatgatttggacgtcaacgttgcagatcc 31788583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 108 - 270
Target Start/End: Original strand, 10929632 - 10929798
Alignment:
Q  108 gtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtt----tgatttcgtgttttggtgttgtgttcgtttaattcctattga 203  Q
    ||||||||||||||||||||||  |||||||||||| || |||||| ||  |||    |||||| | || ||| ||  ||||||||||  ||| | ||||    
T  10929632 gtgatttcgtcgtctgagtgcggtgttgtgttgttcgtcgtcttgtacgacgttgttttgatttagcgtcttgttgcggtgttcgtttggttcatgttga 10929731  T
Q  204 aatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    || |||| ||||||||||| ||| ||||||||||| ||||||   |||||||||||||||| |||||    
T  10929732 aaaatcagcttcagtcaatcacagattcaatcaatgatttggacatcaacgttgcagatccggaagc 10929798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 108 - 264
Target Start/End: Original strand, 36691845 - 36692001
Alignment:
Q  108 gtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaaata 207  Q
    ||||||||||||||| |||||| |||| ||||||||||| | | |||||  |||||||||||  | |||  |  ||||||||||| || ||| ||||| |    
T  36691845 gtgatttcgtcgtctaagtgcggcgttttgttgttcatcgtttagtgcgacgtttgatttcgcatcttgtcgcggtgttcgtttagtttctactgaaaga 36691944  T
Q  208 tcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatcc 264  Q
    |  || || ||||||||||||||||| |||| ||||||  |||||| ||||||||||    
T  36691945 ttgacatcggtcaattacaaattcaagcaatgatttggacgtcaacattgcagatcc 36692001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 108 - 256
Target Start/End: Complemental strand, 43397248 - 43397100
Alignment:
Q  108 gtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaaata 207  Q
    ||||||||||||||| |||| | ||||||||||||| || ||||||| || ||||||||||| || |||  |  ||||||||||| ||| |||||||| |    
T  43397248 gtgatttcgtcgtctaagtgtggcgttgtgttgttcgtcgtcttgtgtggcgtttgatttcgcgtcttgtcgcggtgttcgtttatttcatattgaaaga 43397149  T
Q  208 tcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgtt 256  Q
    ||  | | || ||| ||| ||||||| |||| ||||||| |||||||||    
T  43397148 tcggcattagccaactacgaattcaaccaatgatttgggcgtcaacgtt 43397100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 105 - 264
Target Start/End: Complemental strand, 29279702 - 29279543
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||||||| | |||| |||||||||| |  || ||||| |||   ||||||||||||| |||  |  || || ||||| ||||  |||||    
T  29279702 tttgtgatttcgtcgtctaattgcggcgttgtgttggtagtcgtcttgggcgacatttgatttcgtgtcttgtcgcggtattagtttagttcccgttgaa 29279603  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatcc 264  Q
      |||||| |||||| |||||||||||||||||| ||||| | ||||| |||||||||||    
T  29279602 tgatcaacatcagtcgattacaaattcaatcaatgatttgtgcgtcaatgttgcagatcc 29279543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 111 - 259
Target Start/End: Complemental strand, 34128813 - 34128662
Alignment:
Q  111 atttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcgg---tgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaaata 207  Q
    |||||||||||||||||||  ||| |||||||| || |||||||||    |||||||||  | || ||| ||| ||||| ||||  |||||||| ||| |    
T  34128813 atttcgtcgtctgagtgcggtgttatgttgttcgtcgtcttgtgcgacgttgtttgattgtgcgtcttgttgtggtgtttgtttggttcctattaaaaga 34128714  T
Q  208 tcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgca 259  Q
    || |||| |||| |||| ||||||||||||| ||||||| ||||| ||||||    
T  34128713 tcgactttagtcgattataaattcaatcaattatttgggcgtcaatgttgca 34128662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 105 - 205
Target Start/End: Original strand, 4099071 - 4099171
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    ||||| |||||||||||| |||||| ||||||||||||| |  |||||||||| ||||||||| | ||||||  || ||||| ||| | |||||||||||    
T  4099071 tttgtaatttcgtcgtctaagtgcggcgttgtgttgttcgttgtcttgtgcggcgtttgattttgcgttttgtcgtggtgtttgttcagttcctattgaa 4099170  T
Q  205 a 205  Q
    |    
T  4099171 a 4099171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 158 - 270
Target Start/End: Original strand, 11812704 - 11812816
Alignment:
Q  158 tgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttg 257  Q
    |||||||||| |||| ||| ||  |||||  ||| |||||||| |||| |||| |||||||| |||||| ||||||||||||| |  | || ||||||||    
T  11812704 tgtttgattttgtgtcttgttgcggtgtttatttgattcctatagaaagatcagcttcagtcgattacagattcaatcaataactcagatgccaacgttg 11812803  T
Q  258 cagatccagaagc 270  Q
    |||||||||||||    
T  11812804 cagatccagaagc 11812816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 194 - 270
Target Start/End: Complemental strand, 33585778 - 33585702
Alignment:
Q  194 ttcctattgaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    |||||||||||| ||| || ||| |||||||||||||||| |||| ||||||  ||||||||||||||||| |||||    
T  33585778 ttcctattgaaaaatctacctcaatcaattacaaattcaagcaatgatttggacgtcaacgttgcagatccggaagc 33585702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 194 - 270
Target Start/End: Original strand, 41694678 - 41694754
Alignment:
Q  194 ttcctattgaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    ||||| |||||| |||| |||||| |||||||| ||||||||||| |||||||  |||||||||||||| |||||||    
T  41694678 ttcctgttgaaagatcagcttcagccaattacatattcaatcaatgatttgggcatcaacgttgcagatgcagaagc 41694754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 105 - 264
Target Start/End: Complemental strand, 4041726 - 4041567
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||| ||| |||||| ||||||||||||| || |||||| ||| ||||||||| |  | |||   | ||||| |||   |||||||||||    
T  4041726 tttgtgatttcgtcttctaagtgcgtcgttgtgttgttcgtcgtcttgtacggcgtttgattttgcatcttgtcatggtgtttgttcggttcctattgaa 4041627  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatcc 264  Q
    | ||  || | |||||||| |||| |||| |||| ||||||  |||||||||||||||||    
T  4041626 agatttacattagtcaattgcaaactcaaccaatgatttggacgtcaacgttgcagatcc 4041567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 182 - 265
Target Start/End: Complemental strand, 33760248 - 33760165
Alignment:
Q  182 gtgttcgtttaattcctattgaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatcca 265  Q
    |||||||||| |||| |||||||| |||||||||||||||||| | | ||||||||| ||||| | ||| | ||||||||||||    
T  33760248 gtgttcgtttgattcatattgaaagatcaacttcagtcaattatagactcaatcaatgatttgagcgtcgatgttgcagatcca 33760165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 105 - 238
Target Start/End: Original strand, 19597844 - 19597980
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgt---gcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctatt 201  Q
    |||||||||||||||||  ||||| || ||||||||||| || | ||||   | | |||||||||| |||| ||| |||  ||||||||| |||| ||||    
T  19597844 tttgtgatttcgtcgtccaagtgcaacattgtgttgttcgtcgtattgtgtcgtgttgtttgattttgtgtcttgttgtgatgttcgtttgattcttatt 19597943  T
Q  202 gaaatatcaacttcagtcaattacaaattcaatcaat 238  Q
    |||| | |||||||||| ||| ||||||| |||||||    
T  19597944 gaaagaccaacttcagttaatcacaaatttaatcaat 19597980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 198 - 270
Target Start/End: Complemental strand, 17249186 - 17249114
Alignment:
Q  198 tattgaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    |||||||| ||||  |||||||||| ||| ||||||||||| ||||||  |||||||||||||||||| ||||    
T  17249186 tattgaaagatcagtttcagtcaatcacagattcaatcaatgatttggacgtcaacgttgcagatccataagc 17249114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 182 - 270
Target Start/End: Original strand, 24461488 - 24461576
Alignment:
Q  182 gtgttcgtttaattcctattgaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    ||||||||||  ||| |||||||| |||||||||||||||  ||| |||||||| || ||||||  | ||||||||||||||| |||||    
T  24461488 gtgttcgtttggttcatattgaaagatcaacttcagtcaaccacagattcaatcgatgatttggacgccaacgttgcagatccggaagc 24461576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 105 - 264
Target Start/End: Complemental strand, 39310984 - 39310825
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    ||||||||||| || ||| |||| |  |||||||||||| || |||||||| | ||||||||||| |  ||   |  || || ||||| ||||||||  |    
T  39310984 tttgtgatttcatcatctaagtgtggtgttgtgttgttcttcgtcttgtgcagcgtttgatttcgcgccttatcgcggtatttgtttagttcctatttga 39310885  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatcc 264  Q
    | ||| |||||||||||||||||||||||||| | |||||||  ||||| ||||| ||||    
T  39310884 agatcgacttcagtcaattacaaattcaatcattgatttgggcatcaacattgcacatcc 39310825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 265
Target Start/End: Original strand, 41327524 - 41327631
Alignment:
Q  158 tgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttg 257  Q
    |||||||||||  || ||| ||  ||||||||||  || ||||||||| ||| | ||||||||||||||||||||| |||| ||||||  |||||| ||     
T  41327524 tgtttgatttcacgtattgttgcggtgttcgtttggtttctattgaaagatctatttcagtcaattacaaattcaaccaatgatttggacgtcaacatta 41327623  T
Q  258 cagatcca 265  Q
    ||||||||    
T  41327624 cagatcca 41327631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 216 - 270
Target Start/End: Complemental strand, 12677471 - 12677417
Alignment:
Q  216 agtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    |||||||||||||||||| |||| ||||||| |||||||||| |||||| |||||    
T  12677471 agtcaattacaaattcaaccaatgatttgggcgtcaacgttgaagatccggaagc 12677417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 83
Target Start/End: Complemental strand, 18107941 - 18107883
Alignment:
Q  25 tgcatctttttcccctttcttttaatttaaattagtggatttcacacatatcaaatttt 83  Q
    |||||||||| ||||||||||| || |||||| ||||| ||||||||||||||| ||||    
T  18107941 tgcatcttttacccctttctttcaaattaaataagtggttttcacacatatcaattttt 18107883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 182 - 256
Target Start/End: Complemental strand, 23933674 - 23933600
Alignment:
Q  182 gtgttcgtttaattcctattgaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgtt 256  Q
    ||||||||||  ||| ||||||||  ||||||||||||||| ||| ||||||||||| ||||||  |||||||||    
T  23933674 gtgttcgtttggttcttattgaaagttcaacttcagtcaatcacagattcaatcaattatttggacgtcaacgtt 23933600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 198 - 260
Target Start/End: Original strand, 37416771 - 37416833
Alignment:
Q  198 tattgaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcag 260  Q
    ||||||||||||||||  ||||||| ||| ||||||||||| |||||| ||||||| ||||||    
T  37416771 tattgaaatatcaactcgagtcaatcacagattcaatcaatgatttggatgtcaacattgcag 37416833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 185 - 238
Target Start/End: Original strand, 14416208 - 14416261
Alignment:
Q  185 ttcgtttaattcctattgaaatatcaacttcagtcaattacaaattcaatcaat 238  Q
    |||||||  ||||| |||||||||| |||||||||||||||| |||||||||||    
T  14416208 ttcgtttggttcctgttgaaatatcgacttcagtcaattacagattcaatcaat 14416261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 93
Target Start/End: Complemental strand, 28871959 - 28871898
Alignment:
Q  32 ttttcccctttcttttaatttaaattagtggatttcacacatatcaaattttacattttgtg 93  Q
    ||||| ||||||||| ||||||||| ||||  ||||||||||||||| |||| |||||||||    
T  28871959 ttttctcctttctttcaatttaaataagtgattttcacacatatcaagtttttcattttgtg 28871898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 268
Target Start/End: Original strand, 14423386 - 14423456
Alignment:
Q  198 tattgaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaa 268  Q
    |||||||| ||| |||| ||||||||||| ||| ||||||| ||||||  |||||||||||| ||| ||||    
T  14423386 tattgaaagatcgactttagtcaattacagatttaatcaatgatttggacgtcaacgttgcaaatctagaa 14423456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 263
Target Start/End: Complemental strand, 16484724 - 16484658
Alignment:
Q  197 ctattgaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatc 263  Q
    ||||||||| ||||| |||| ||||||||||||||||| ||| | || | |||||||| ||||||||    
T  16484724 ctattgaaagatcaatttcaatcaattacaaattcaattaatgactttgatgtcaacgctgcagatc 16484658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 256
Target Start/End: Complemental strand, 36175551 - 36175477
Alignment:
Q  182 gtgttcgtttaattcctattgaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgtt 256  Q
    ||||||||||  || ||||||||| |||||| |||  |||||||| ||||||||||| ||||||  |||||||||    
T  36175551 gtgttcgtttggtttctattgaaagatcaacatcaaacaattacatattcaatcaatgatttggacgtcaacgtt 36175477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 105 - 154
Target Start/End: Original strand, 3240865 - 3240914
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtg 154  Q
    |||||||||||||||||||| ||||  |||||||||||| || |||||||    
T  3240865 tttgtgatttcgtcgtctgaatgcggtgttgtgttgttcttcatcttgtg 3240914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 107 - 168
Target Start/End: Original strand, 36323839 - 36323900
Alignment:
Q  107 tgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttc 168  Q
    |||||||||||||| |||||||| | ||||||||||  |  |||||||||| ||||||||||    
T  36323839 tgtgatttcgtcgtttgagtgcggctttgtgttgtttgttgtcttgtgcggcgtttgatttc 36323900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 228 - 264
Target Start/End: Complemental strand, 26025400 - 26025364
Alignment:
Q  228 attcaatcaataatttgggtgtcaacgttgcagatcc 264  Q
    |||||||||| |||||||||||||| |||||||||||    
T  26025400 attcaatcaaaaatttgggtgtcaatgttgcagatcc 26025364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 33923603 - 33923647
Alignment:
Q  31 tttttcccctttcttttaatttaaattagtggatttcacacatat 75  Q
    |||||||| ||||||| ||||||||| ||||| ||||||||||||    
T  33923603 tttttcccttttctttcaatttaaataagtggttttcacacatat 33923647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 83
Target Start/End: Complemental strand, 43397322 - 43397266
Alignment:
Q  27 catctttttcccctttcttttaatttaaattagtggatttcacacatatcaaatttt 83  Q
    |||||||||||| ||||||| ||| ||||| ||||| ||||||| ||||||| ||||    
T  43397322 catctttttcccttttctttcaatctaaataagtggttttcacatatatcaagtttt 43397266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 82; Significance: 9e-39; HSPs: 68)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 105 - 270
Target Start/End: Original strand, 5983797 - 5983962
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||||||| |||||| |||| |||||||| || |||||||||| |||||||||||||| |||  |  ||||| ||||| |||||||||||    
T  5983797 tttgtgatttcgtcgtctaagtgcggcgttttgttgttcgtcgtcttgtgcggcgtttgatttcgtgtcttgtcgcggtgtttgtttagttcctattgaa 5983896  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    | ||| || |||||||||||||||||||| |||| ||||||| ||||||| ||||||||| |||||    
T  5983897 agatctacatcagtcaattacaaattcaaccaatgatttgggcgtcaacgctgcagatccggaagc 5983962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 105 - 264
Target Start/End: Original strand, 1742242 - 1742401
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||||||| |||||| ||||||||||||| || |||||||||  ||||||||||| || |||  || ||||||||||| |||||||||||    
T  1742242 tttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcgacgtttgatttcgcgtcttgtcgtggtgttcgtttatttcctattgaa 1742341  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatcc 264  Q
    | |||  | ||| |||||||||||||||| |||| ||||||| |||||||||| ||||||    
T  1742342 agatcggcatcaatcaattacaaattcaaccaatgatttgggcgtcaacgttgaagatcc 1742401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 105 - 270
Target Start/End: Complemental strand, 34878409 - 34878244
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    ||||||| |||||||| | ||| || ||||||||||||| || |||||||||||||||||||||| ||||||  |  ||||| ||| | |||||||||||    
T  34878409 tttgtgacttcgtcgtttaagtacggcgttgtgttgttcgtcgtcttgtgcggtgtttgatttcgcgttttgtcgcggtgtttgttaatttcctattgaa 34878310  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    | |||  | |||||||||||||||||||| |||| ||||||| |||||||||| |||||| |||||    
T  34878309 agatcggcatcagtcaattacaaattcaaccaatgatttgggcgtcaacgttgaagatccggaagc 34878244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 105 - 270
Target Start/End: Complemental strand, 10776592 - 10776427
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||| ||||||| |||||| ||||||||||||| || |||| ||||| ||||||||  | || |||  |  ||||||||||| ||||| |||||    
T  10776592 tttgtgatttagtcgtctaagtgcggcgttgtgttgttcgtcgtcttatgcggcgtttgattgtgcgtcttgtcgcggtgttcgtttacttccttttgaa 10776493  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    | ||| || |||||||||||||||| |||||||| ||||||  |||||| ||||||||||||||||    
T  10776492 agatcgacatcagtcaattacaaatccaatcaatgatttggacgtcaacattgcagatccagaagc 10776427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 105 - 270
Target Start/End: Original strand, 14872601 - 14872765
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||| ||||||  |||||| | ||||||||||| || |||||||||| ||||||||||| || |||  |  |||||| |||| ||| |||||||    
T  14872601 tttgtgattttgtcgtccaagtgcggcattgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgtcttgtcgcggtgttcatttagttc-tattgaa 14872699  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    | ||| || |||||||||||||||||||| |||| ||||||| ||||||||||||||||| |||||    
T  14872700 agatcgacatcagtcaattacaaattcaaccaatgatttgggcgtcaacgttgcagatccggaagc 14872765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 105 - 270
Target Start/End: Complemental strand, 23291773 - 23291608
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||||||| ||| || |||||||||||||||  |||||||||  |||||||||||  | |||  |  ||||||||||| |||||||||||    
T  23291773 tttgtgatttcgtcgtctaagtacggcgttgtgttgttcattatcttgtgcgacgtttgatttcgcttcttgtcgcggtgttcgtttatttcctattgaa 23291674  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    | |||  | |||||||||||||||||||| |||| |||||||  ||||||||| |||||| |||||    
T  23291673 agatcggcatcagtcaattacaaattcaaccaatgatttgggcatcaacgttgaagatccggaagc 23291608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 105 - 257
Target Start/End: Complemental strand, 7836927 - 7836775
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    ||||||||||| |||||| |||||| ||||||||||||| || |||||||||  ||||||||||| || |||  |  | ||||||||| ||||||| |||    
T  7836927 tttgtgatttcatcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcgacgtttgatttcgcgtcttgtcgcggcgttcgtttatttcctatcgaa 7836828  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttg 257  Q
    | ||| || |||||||||||||||||||| |||| ||||||| ||||||||||    
T  7836827 agatcgacatcagtcaattacaaattcaaccaatgatttgggcgtcaacgttg 7836775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 105 - 270
Target Start/End: Original strand, 31918949 - 31919114
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||||||| | |||| || |||||||||   | | |||||||| ||||||||||| || |||  |  ||||||||||| ||||| |||||    
T  31918949 tttgtgatttcgtcgtctaattgcggcgatgtgttgttagccattttgtgcggcgtttgatttcgcgtcttgtcgcagtgttcgtttagttcctgttgaa 31919048  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    | ||| || |||||||||||||| |||||||||| ||||| |  ||||||||||||||||||||||    
T  31919049 agatcgacatcagtcaattacaagttcaatcaatgatttgagcatcaacgttgcagatccagaagc 31919114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 105 - 270
Target Start/End: Original strand, 44915600 - 44915765
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    ||||||||||| |||||| | || | ||||||| ||||  || | ||||||||  |||||||| | ||||||  |  ||||||||||| ||| |||||||    
T  44915600 tttgtgatttcatcgtctaattgtggcgttgtgatgttagtcatattgtgcggcatttgattttgcgttttgtcgcggtgttcgtttagttcatattgaa 44915699  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    | |||||| ||||||||||||||||||||||||| ||||||| ||||| ||||||||||| |||||    
T  44915700 agatcaacatcagtcaattacaaattcaatcaatgatttgggcgtcaatgttgcagatccggaagc 44915765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 105 - 264
Target Start/End: Complemental strand, 35484522 - 35484363
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||| ||||||||||| |||||| ||||||||||||| || |||||||||   |||| ||||| || |||  |  ||||| ||| |||||||||||||    
T  35484522 tttgtggtttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcgtcatttgctttcgcgtcttgtcgcggtgtttgttcaattcctattgaa 35484423  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatcc 264  Q
    | ||| || ||| |||||||||||||||| |||| ||||||  |||||||||||||||||    
T  35484422 agatctacatcaatcaattacaaattcaagcaatgatttggacgtcaacgttgcagatcc 35484363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 105 - 270
Target Start/End: Complemental strand, 21947749 - 21947584
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||||||| |||||  || |||||||||| || ||| |  ||| ||||||||||| || |||  |  ||||| ||||| ||| |||||||    
T  21947749 tttgtgatttcgtcgtctaagtgcagcgctgtgttgttcgtcgtctcggacggcgtttgatttcgcgtcttgtcgcggtgtttgtttagttcttattgaa 21947650  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    | ||| || |||||||||||||||||||| |||| ||||||  ||||||||||||||||| |||||    
T  21947649 agatctacatcagtcaattacaaattcaaccaatgatttggacgtcaacgttgcagatccggaagc 21947584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 105 - 270
Target Start/End: Original strand, 45415519 - 45415684
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||||||| |||||| |||| |||||||| || ||||||||   ||||||||||| || |||  |  ||||| ||| | |||||||||||    
T  45415519 tttgtgatttcgtcgtctaagtgcggcgttttgttgttcgtcgtcttgtgcatcgtttgatttcgcgtcttgtcgcggtgtttgttcagttcctattgaa 45415618  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    | ||| || ||| ||||||||||| |||| |||| ||||||  ||||||||||||||||| |||||    
T  45415619 agatctacatcaatcaattacaaactcaagcaatgatttggacgtcaacgttgcagatccggaagc 45415684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 108 - 270
Target Start/End: Original strand, 48750142 - 48750311
Alignment:
Q  108 gtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcgg---tgtttgatttcg--tgttttggtgtt--gtgttcgtttaattcctat 200  Q
    |||||||||  |||| |||||||||||||||||||| || |||||||||    ||||||||||||  | ||||| |||   |||||||||| |||| |||    
T  48750142 gtgatttcgctgtcttagtgcgacgttgtgttgttcgtcgtcttgtgcgacgttgtttgatttcgcatcttttgttgtgcggtgttcgtttgattcgtat 48750241  T
Q  201 tgaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    ||||| |||| |||||| |||| ||||||| ||||||| ||||||| |||||||||||||||||| ||||    
T  48750242 tgaaagatcagcttcagacaatcacaaatttaatcaatgatttgggcgtcaacgttgcagatccataagc 48750311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 108 - 270
Target Start/End: Original strand, 47132864 - 47133029
Alignment:
Q  108 gtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcgg---tgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||||||||| | ||||||||||||| || | ||||||||   ||||| |||||| || ||| ||  ||||||||||  ||| |||||||    
T  47132864 gtgatttcgtcgtctgagtggggcgttgtgttgttcgtcgttttgtgcggcgttgtttaatttcgcgtcttgttgcggtgttcgtttgcttcatattgaa 47132963  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    | |||| ||||||||||| ||| |||||||| || ||||||  |||||| |||||||||| |||||    
T  47132964 agatcagcttcagtcaatcacagattcaatcgatgatttggacgtcaacattgcagatccggaagc 47133029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 105 - 270
Target Start/End: Original strand, 16262819 - 16262987
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcgg---tgtttgatttcgtgttttggtgttgtgttcgtttaattcctatt 201  Q
    |||||||||| |||||||||||| | || || ||||||  |  | ||||||||   |||||||||||| || ||| ||| |||||||||| |||| ||||    
T  16262819 tttgtgattttgtcgtctgagtgtggcgatgcgttgttggttgttttgtgcggcgttgtttgatttcgcgtcttgttgtggtgttcgtttgattcatatt 16262918  T
Q  202 gaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    |||| ||||||| |||||||| ||| ||||||||||| ||||| |  |||||||||||||||| |||||    
T  16262919 gaaaaatcaactgcagtcaatcacatattcaatcaatgatttgtgcatcaacgttgcagatccggaagc 16262987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 105 - 270
Target Start/End: Original strand, 49626872 - 49627039
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcgg---tgtttgatttcgtgttttggtgttgtgttcgtttaattcctatt 201  Q
    ||||||||||||||||||  ||||||| ||||||||||| || ||||||||||   ||||||||||    | ||| ||  |||||||||   ||| ||||    
T  49626872 tttgtgatttcgtcgtctatgtgcgaccttgtgttgttcgtcgtcttgtgcggcgttgtttgatttgacatcttgttgcggtgttcgttgg-ttcatatt 49626970  T
Q  202 gaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    |||| |||| ||||||||||| ||||||||||||||| ||||||  ||||||||||||||| |||||||    
T  49626971 gaaagatcagcttcagtcaatcacaaattcaatcaatgatttggacgtcaacgttgcagatgcagaagc 49627039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 105 - 264
Target Start/End: Original strand, 3228233 - 3228389
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||||||| ||||  |   |||||||||| || ||||||||||  ||||||||||  | |||  |  ||||| ||||| |||||||||||    
T  3228233 tttgtgatttcgtcgtctaagtgtta---tgtgttgttcgtcgtcttgtgcggcatttgatttcgcatcttgtcgcggtgtttgtttagttcctattgaa 3228329  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatcc 264  Q
    | ||| |  |||||||||||||||| |||||||| ||||||| |||||||||||||||||    
T  3228330 agatcgatatcagtcaattacaaatacaatcaatgatttgggcgtcaacgttgcagatcc 3228389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 105 - 270
Target Start/End: Complemental strand, 7337794 - 7337629
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    ||||||||||| |||||| |||||| ||||||||||||| || ||||||||   ||||||||||| || |||  |  ||||| ||| | ||| |||||||    
T  7337794 tttgtgatttcatcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcaacgtttgatttcgcgtcttgtcgcggtgtttgttcagttcatattgaa 7337695  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    | ||| || ||| |||||||||||||||| |||| |||||   ||||||||||||||||| |||||    
T  7337694 agatctacatcaatcaattacaaattcaagcaatgatttgcacgtcaacgttgcagatccggaagc 7337629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 105 - 270
Target Start/End: Original strand, 21686834 - 21686999
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||||||| ||| || ||||||||||||| || |||||||||| ||||||||| | ||||||  |  ||||| ||| | |||||||||||    
T  21686834 tttgtgatttcgtcgtctaagtacggcgttgtgttgttcgtcgtcttgtgcggcgtttgattttgcgttttgtcgcggtgtttgttaatttcctattgaa 21686933  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    | ||   | ||| ||||||| |||||||| |||| ||||||| |||||| ||| |||||| |||||    
T  21686934 agataggcatcactcaattaaaaattcaaccaatgatttgggcgtcaacattgaagatccggaagc 21686999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 106 - 270
Target Start/End: Original strand, 24582910 - 24583076
Alignment:
Q  106 ttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcgg---tgtttgatttcgtgttttggtgttgtgttcgtttaattcctattg 202  Q
    ||||||||| ||||||| |||| ||| ||||||||||||||  |||||||||   |||||||||| |  | ||| ||  |||||||||   ||| |||||    
T  24582910 ttgtgattttgtcgtctaagtgtgaccttgtgttgttcatcgccttgtgcggcgttgtttgatttggcatcttgttgcggtgttcgttgg-ttcatattg 24583008  T
Q  203 aaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    ||| |||| ||||||||||| ||| ||||||||||| ||||||  |||||||||||||||||||||||    
T  24583009 aaagatcagcttcagtcaatcacagattcaatcaatgatttggacgtcaacgttgcagatccagaagc 24583076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 105 - 246
Target Start/End: Original strand, 27456501 - 27456642
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    ||||||||||| |||||| | |||| ||||||||||||  || ||||||||   ||||||||||| || |||  |  ||||||||||| |||||||||||    
T  27456501 tttgtgatttcatcgtctaattgcggcgttgtgttgttagtcatcttgtgcaacgtttgatttcgcgtcttgtcgcggtgttcgtttagttcctattgaa 27456600  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttggg 246  Q
    | ||| || |||||||||||||| |||||||||| |||||||    
T  27456601 agatcgacatcagtcaattacaagttcaatcaatgatttggg 27456642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 105 - 270
Target Start/End: Complemental strand, 8212041 - 8211877
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||||||| | |||| |||||||||||||||| |||||||||| |||||||| |  || |||  |   ||||| |||| || ||||||||    
T  8212041 tttgtgatttcgtcgtctaaatgcggcgttgtgttgttcatcgtcttgtgcggcgtttgattccacgtcttgtcgcgatgttcatttagttactattgaa 8211942  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    | ||| || |||||||| ||||||||||| |||| || | || ||||| ||||||||||| |||||    
T  8211941 agatctacatcagtcaaatacaaattcaaccaatgatct-ggcgtcaatgttgcagatccggaagc 8211877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 105 - 262
Target Start/End: Complemental strand, 27580259 - 27580102
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||||| | | |||| ||||||||||||| || | | ||| ||  |||||||| | || |||  |  |||||| |||| |||||||||||    
T  27580259 tttgtgatttcgtcgtttaaatgcggcgttgtgttgttcgtcgtatcgtgtggcatttgattttgcgtcttgtcgcggtgttcatttagttcctattgaa 27580160  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagat 262  Q
    | ||| |||||||| ||||||||||||||| ||| ||||||| |||||| ||||||||    
T  27580159 agatcgacttcagtaaattacaaattcaataaatgatttgggcgtcaacattgcagat 27580102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 105 - 262
Target Start/End: Original strand, 32394959 - 32395116
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    ||||||||||||||||   |||||| |||||||||| ||||| ||||||||   ||||||||||  |||||   |  ||||| ||| | |||||||||||    
T  32394959 tttgtgatttcgtcgttcaagtgcggcgttgtgttgctcatcgtcttgtgcaacgtttgatttcccgttttatcgcggtgtttgttcagttcctattgaa 32395058  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagat 262  Q
    | ||| || ||| |||||||||||||||| |||| ||||||  |||||||||||||||    
T  32395059 agatctacatcattcaattacaaattcaaccaatgatttggacgtcaacgttgcagat 32395116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 105 - 229
Target Start/End: Original strand, 940324 - 940448
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    ||||||||| |||||||| ||||||  |||||||||||  || |||||||||  ||||||||||| || |||  |  |||||||||||||||||||||||    
T  940324 tttgtgattccgtcgtctaagtgcggtgttgtgttgtttgtcgtcttgtgcgacgtttgatttcgcgtcttgtcgcggtgttcgtttaattcctattgaa 940423  T
Q  205 atatcaacttcagtcaattacaaat 229  Q
    ||||  || || |||||||||||||    
T  940424 atatatacatctgtcaattacaaat 940448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 108 - 256
Target Start/End: Original strand, 16161795 - 16161950
Alignment:
Q  108 gtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcgg---tgtttgattt--cgtgttttg--gtgttgtgttcgtttaattcctat 200  Q
    ||||||||||||||| |||||||||||||||||||| || ||||||||||   ||||||||||  | | |||||  |||  ||||||||||  ||| |||    
T  16161795 gtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtcttgtgcggcgttgtttgatttcacatcttttgttgtgcggtgttcgtttggttcgtat 16161894  T
Q  201 tgaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgtt 256  Q
    ||||| |||| ||| || |||| ||||||||| ||||| ||||||| |||||||||    
T  16161895 tgaaagatcagcttaagacaatcacaaattcattcaatgatttgggcgtcaacgtt 16161950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 25 - 263
Target Start/End: Original strand, 18939209 - 18939438
Alignment:
Q  25 tgcatctttttcccctttcttttaatttaaattagtggatttcacacatatcaaattttacattttgtgcnnnnnnnnngtttgtgatttcgtcgtctga 124  Q
    |||||||||||||||||||||| ||||||||| ||| | ||||||||||||||| |||| |||||||||           ||||||||||||||||||||    
T  18939209 tgcatctttttcccctttctttcaatttaaataagtagttttcacacatatcaagtttttcattttgtg--------ttttttgtgatttcgtcgtctga 18939300  T
Q  125 gtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaaatatcaacttcagtcaatta 224  Q
    ||| | ||||||||| ||| ||     ||| ||  |||||||||  ||  || ||  |||||| |||  ||  |||||||| ||||||||||||||||||    
T  18939301 gtgaggcgttgtgttcttcgtcgatcagtgtggcatttgatttcacgtcctgttgcggtgttcatttggtt-ttattgaaagatcaacttcagtcaatta 18939399  T
Q  225 caaattcaatcaataatttgggtgtcaacgttgcagatc 263  Q
    || ||| ||||||| ||||||  ||| ||||||||||||    
T  18939400 cagatttaatcaatgatttggacgtcgacgttgcagatc 18939438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 124 - 268
Target Start/End: Complemental strand, 36775829 - 36775678
Alignment:
Q  124 agtgcgacgttgtgttgttcatcctcttgtgcggtgtt---tgatttcg--tgttttggtgtt--gtgttcgtttaattcctattgaaatatcaacttca 216  Q
    |||||||||||||||||||| || |||||||| |||||   ||||||||  | ||||| |||   || |||||||  ||| |||||||| |||  |||||    
T  36775829 agtgcgacgttgtgttgttcgtcgtcttgtgcagtgttgtttgatttcgcatcttttgttgtgcggtattcgtttggttcgtattgaaagatcggcttca 36775730  T
Q  217 gtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaa 268  Q
    | |||| ||||||||||||||| ||||||| |||||||||||||||||||||    
T  36775729 gacaatcacaaattcaatcaatgatttgggcgtcaacgttgcagatccagaa 36775678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 108 - 270
Target Start/End: Complemental strand, 34413225 - 34413058
Alignment:
Q  108 gtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcgg---tgtttgatttcg--tgttttggtgtt--gtgttcgtttaattcctat 200  Q
    ||||||| ||||||| |||||||| ||||||||||| || ||||||||||   ||||||||||||  | ||||| |||   |||||||||| |||  |||    
T  34413225 gtgattttgtcgtcttagtgcgacattgtgttgttcgtcgtcttgtgcggcgttgtttgatttcgcatcttttgttgtgcggtgttcgtttgatttgtat 34413126  T
Q  201 tgaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    ||||| |||| || ||| |||| |||||||||||||||||  |||  |||||||||| ||||||||||||    
T  34413125 tgaaagatcagctccagacaatcacaaattcaatcaataa--tggacgtcaacgttgtagatccagaagc 34413058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 105 - 258
Target Start/End: Original strand, 41994385 - 41994541
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgt---gcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctatt 201  Q
    |||||||||||  ||||||| |||| |||||||||||||||| ||||||   ||| ||||||||||||  | ||| ||| ||||||||||  ||| ||||    
T  41994385 tttgtgatttcaacgtctgaatgcggcgttgtgttgttcatcgtcttgtgcagcgttgtttgatttcggatcttgttgtggtgttcgtttcgttcatatt 41994484  T
Q  202 gaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgc 258  Q
    |||| ||||  |||||||||| | | ||| ||||||| ||||||  |||||||||||    
T  41994485 gaaagatcagtttcagtcaatcaaatatttaatcaatgatttggacgtcaacgttgc 41994541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 105 - 270
Target Start/End: Original strand, 44543231 - 44543398
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcgg---tgtttgatttcgtgttttggtgttgtgttcgtttaattcctatt 201  Q
    |||||||||||||||||| |||||||| ||||||||||| || | || |||||   |||||||||| |  | ||  ||  |||||||||   ||| ||||    
T  44543231 tttgtgatttcgtcgtctaagtgcgactttgtgttgttcgtcgtattatgcggcgttgtttgatttggcatcttattgcggtgttcgttgg-ttcatatt 44543329  T
Q  202 gaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    |||| |||| ||| ||||||| ||| ||||||||||| ||||||  |||||||||||||||||||||||    
T  44543330 gaaagatcagctttagtcaatcacagattcaatcaatgatttggacgtcaacgttgcagatccagaagc 44543398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 177 - 270
Target Start/End: Complemental strand, 37720208 - 37720115
Alignment:
Q  177 gtgttgtgttcgtttaattcctattgaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    |||| ||||||||||  ||| |||||||| ||||||||||| |||| ||||||||| | ||| ||||||| |||||||||||||||||| ||||    
T  37720208 gtgtggtgttcgtttggttcgtattgaaagatcaacttcagacaatcacaaattcatttaatgatttgggcgtcaacgttgcagatccaaaagc 37720115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 93
Target Start/End: Original strand, 34479380 - 34479448
Alignment:
Q  25 tgcatctttttcccctttcttttaatttaaattagtggatttcacacatatcaaattttacattttgtg 93  Q
    ||||||||||| |||||||||||||||||||| ||||| ||||||||||||||| ||||  ||||||||    
T  34479380 tgcatcttttttccctttcttttaatttaaataagtggttttcacacatatcaagttttttattttgtg 34479448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 194 - 270
Target Start/End: Original strand, 45789591 - 45789667
Alignment:
Q  194 ttcctattgaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    ||||||||||||||||||||| | ||||||||| ||||||||||| ||||||| ||| |||||| |||||| |||||    
T  45789591 ttcctattgaaatatcaactttaatcaattacagattcaatcaatgatttgggcgtcgacgttgtagatccggaagc 45789667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 184 - 262
Target Start/End: Complemental strand, 51916715 - 51916639
Alignment:
Q  184 gttcgtttaattcctattgaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagat 262  Q
    ||||||||| |||||||||||| |  ||| ||||||||||||||||||||||||| ||||| | |||||||||||||||    
T  51916715 gttcgtttagttcctattgaaaga--aacgtcagtcaattacaaattcaatcaatgatttgagcgtcaacgttgcagat 51916639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 198 - 259
Target Start/End: Complemental strand, 6217865 - 6217804
Alignment:
Q  198 tattgaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgca 259  Q
    |||||||| |||||||||||||||| ||||||||||||||| |||||| ||||||| |||||    
T  6217865 tattgaaagatcaacttcagtcaatcacaaattcaatcaatgatttggatgtcaacattgca 6217804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 25 - 93
Target Start/End: Original strand, 31317639 - 31317707
Alignment:
Q  25 tgcatctttttcccctttcttttaatttaaattagtggatttcacacatatcaaattttacattttgtg 93  Q
    ||||||||||||| | |||||| ||||||||| ||||| ||||||||||||||| |||| |||||||||    
T  31317639 tgcatctttttcctcattctttcaatttaaataagtggttttcacacatatcaagtttttcattttgtg 31317707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 244
Target Start/End: Original strand, 12635141 - 12635270
Alignment:
Q  118 cgtctgagtgcgacgttgtgttgttcatcctcttgtgcgg---tgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaaatatcaactt 214  Q
    |||||| ||||| ||||||||||||| || ||||||||||   ||||||||||   ||||||  || |||||| |||  ||| |||||||| ||||||||    
T  12635141 cgtctgtgtgcggcgttgtgttgttcgtcgtcttgtgcggcgttgtttgattttacgttttgtagtggtgttcatttggttcatattgaaagatcaactt 12635240  T
Q  215 cagtcaattacaaattcaatcaataatttg 244  Q
     ||| ||| ||||||||||||||| |||||    
T  12635241 tagtaaatcacaaattcaatcaatgatttg 12635270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 182 - 268
Target Start/End: Complemental strand, 32873918 - 32873832
Alignment:
Q  182 gtgttcgtttaattcctattgaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaa 268  Q
    ||||||||||| |||||||||||  | | |||||||||||||||| ||| ||||||| ||||  | ||||| |||||||||||||||    
T  32873918 gtgttcgtttagttcctattgaatgaccgacttcagtcaattacacatttaatcaatgatttaagcgtcaatgttgcagatccagaa 32873832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 198 - 264
Target Start/End: Original strand, 39888236 - 39888302
Alignment:
Q  198 tattgaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatcc 264  Q
    |||||||| ||| ||||||||||||||||| |||||||||| ||||||| ||| |||||| ||||||    
T  39888236 tattgaaagatcgacttcagtcaattacaacttcaatcaatgatttgggcgtccacgttgtagatcc 39888302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 214 - 263
Target Start/End: Complemental strand, 15431688 - 15431639
Alignment:
Q  214 tcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatc 263  Q
    |||| |||||||||||||||||||| ||||||| ||||||||||||||||    
T  15431688 tcagccaattacaaattcaatcaatgatttgggcgtcaacgttgcagatc 15431639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 105 - 269
Target Start/End: Original strand, 19060868 - 19061034
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgt---gcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctatt 201  Q
    |||||||||||||||||| |||||||| ||||||||||| || ||||||   ||| ||||||||||    | ||| ||  ||||||| ||  ||| ||||    
T  19060868 tttgtgatttcgtcgtctaagtgcgaccttgtgttgttcgtcgtcttgtgtggcgttgtttgatttgacatcttgttgcagtgttcg-ttggttcatatt 19060966  T
Q  202 gaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaag 269  Q
    |||| || | ||||||||||| |||  |||||||||||||||||   |||| |||| |||||||||||    
T  19060967 gaaagattagcttcagtcaatcacaggttcaatcaataatttggacatcaatgttgtagatccagaag 19061034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 105 - 234
Target Start/End: Original strand, 50377289 - 50377418
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||||||| ||| || ||||||||||||| || | || || ||  |||||||||| || |||  |  |||| |||||| | |||||||||    
T  50377289 tttgtgatttcgtcgtctaagtacggcgttgtgttgttcgtcgttttttgtggcatttgatttcgcgtcttgtcgcggtgtacgtttagtccctattgaa 50377388  T
Q  205 atatcaacttcagtcaattacaaattcaat 234  Q
    | ||| || ||||||||||||||| |||||    
T  50377389 agatcgacatcagtcaattacaaagtcaat 50377418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 210 - 270
Target Start/End: Complemental strand, 24597350 - 24597290
Alignment:
Q  210 aacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    ||||||||||||||| ||||||||||||| ||||||  |||||||||| |||||| |||||    
T  24597350 aacttcagtcaattataaattcaatcaatgatttggacgtcaacgttgtagatccggaagc 24597290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 182 - 270
Target Start/End: Original strand, 43412412 - 43412500
Alignment:
Q  182 gtgttcgtttaattcctattgaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    ||||| |||| |||| |||||||||||| | |||| |||||  || ||||||||||| |||||   |||||||||||||||||||||||    
T  43412412 gtgtttgtttgattcatattgaaatatctatttcaatcaatcgcatattcaatcaatgatttgaaagtcaacgttgcagatccagaagc 43412500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 198 - 270
Target Start/End: Complemental strand, 49504633 - 49504561
Alignment:
Q  198 tattgaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    |||||||| ||| || ||| ||||||||||| |||| |||| |||||| |||||||||||||||||| |||||    
T  49504633 tattgaaagatctacatcaatcaattacaaactcaaacaatgatttggatgtcaacgttgcagatccggaagc 49504561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 109 - 263
Target Start/End: Complemental strand, 13144939 - 13144785
Alignment:
Q  109 tgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaaatat 208  Q
    |||||||||||||| | |||| |||||||||||   |  ||||||||    |||||||||| || |||  || |||||| ||| |||| |||||||| |     
T  13144939 tgatttcgtcgtctaaatgcggcgttgtgttgtctgttgtcttgtgcaacatttgatttcgcgtcttgtcgtagtgttcatttgattcatattgaaagac 13144840  T
Q  209 caacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatc 263  Q
    | |||| | ||||||||||||||||||||| ||||||  |||||  |||||||||    
T  13144839 cgactttaatcaattacaaattcaatcaatgatttggacgtcaattttgcagatc 13144785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 218
Target Start/End: Complemental strand, 15435003 - 15434893
Alignment:
Q  108 gtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaaata 207  Q
    ||||||||||||||| |||||| |||| |||||||| |  |||||||||| ||||||||| | || |||  ||  ||||| |||||||||| |||||| |    
T  15435003 gtgatttcgtcgtctaagtgcggcgttctgttgttcgttgtcttgtgcggcgtttgattttgcgtcttgtcgtgatgttcatttaattcctcttgaaaga 15434904  T
Q  208 tcaacttcagt 218  Q
    || || |||||    
T  15434903 tcgacatcagt 15434893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 105 - 151
Target Start/End: Complemental strand, 27469726 - 27469680
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctctt 151  Q
    |||||||||||||||||| ||||||||||||| ||||||||| ||||    
T  27469726 tttgtgatttcgtcgtcttagtgcgacgttgttttgttcatcgtctt 27469680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 210 - 263
Target Start/End: Original strand, 25564064 - 25564117
Alignment:
Q  210 aacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatc 263  Q
    ||||||||||||| ||| ||||||||||| ||||||| |||||| |||||||||    
T  25564064 aacttcagtcaatcacagattcaatcaatgatttgggcgtcaacattgcagatc 25564117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 105 - 222
Target Start/End: Original strand, 31984139 - 31984251
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||||||| |||||| ||||||||||||     |   ||| || |||||||||||||| |||  |  |||||| |||| |||||||||||    
T  31984139 tttgtgatttcgtcgtctaagtgcggcgttgtgttgtt-----tgccgtgtggcgtttgatttcgtgtcttgtcgcggtgttcatttagttcctattgaa 31984233  T
Q  205 atatcaacttcagtcaat 222  Q
    ||||| || |||||||||    
T  31984234 atatcgacatcagtcaat 31984251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 108 - 157
Target Start/End: Complemental strand, 32679226 - 32679177
Alignment:
Q  108 gtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcgg 157  Q
    |||||||| ||||||||||||| ||||||||||||| || ||||||||||    
T  32679226 gtgatttcatcgtctgagtgcggcgttgtgttgttcgtcatcttgtgcgg 32679177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 70
Target Start/End: Original strand, 45789452 - 45789497
Alignment:
Q  25 tgcatctttttcccctttcttttaatttaaattagtggatttcaca 70  Q
    |||||||||||||||||||||| ||||||||| ||||| |||||||    
T  45789452 tgcatctttttcccctttctttcaatttaaataagtggttttcaca 45789497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 143
Target Start/End: Original strand, 15492259 - 15492295
Alignment:
Q  107 tgtgatttcgtcgtctgagtgcgacgttgtgttgttc 143  Q
    ||||||||| |||||||||||||||||||||||||||    
T  15492259 tgtgatttcatcgtctgagtgcgacgttgtgttgttc 15492295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 228 - 267
Target Start/End: Original strand, 3871499 - 3871538
Alignment:
Q  228 attcaatcaataatttgggtgtcaacgttgcagatccaga 267  Q
    ||||||||||  ||||||||||||||||||||||||||||    
T  3871499 attcaatcaaagatttgggtgtcaacgttgcagatccaga 3871538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 183 - 270
Target Start/End: Complemental strand, 29738717 - 29738630
Alignment:
Q  183 tgttcgtttaattcctattgaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    |||| ||||| || |||||| || ||| || |||||||||||||||||||| |||| | ||||| ||||| |||||| |||| |||||    
T  29738717 tgtttgtttagtttctattggaagatctacatcagtcaattacaaattcaaccaatgacttgggcgtcaatgttgcaaatccggaagc 29738630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 270
Target Start/End: Original strand, 1602130 - 1602215
Alignment:
Q  184 gttcgtttaattcctattgaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    |||||||| ||| ||||||||| ||| |||| |||||||||||| |||||||||| |||| ||  |||| |||||| |||| |||||    
T  1602130 gttcgtttgatttctattgaaagatcgactt-agtcaattacaatttcaatcaatgatttaggcatcaatgttgcatatccggaagc 1602215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 143
Target Start/End: Original strand, 11121072 - 11121110
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttc 143  Q
    |||||||||||||||||| ||||||| ||||||||||||    
T  11121072 tttgtgatttcgtcgtcttagtgcgaggttgtgttgttc 11121110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 155
Target Start/End: Complemental strand, 35462168 - 35462118
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgc 155  Q
    |||||||||||||||| | |||||| ||||||||||||| || ||||||||    
T  35462168 tttgtgatttcgtcgtgtaagtgcggcgttgtgttgttcgtcgtcttgtgc 35462118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 105 - 142
Target Start/End: Original strand, 4396949 - 4396986
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgtt 142  Q
    |||||||||||||||| ||||||||||| |||||||||    
T  4396949 tttgtgatttcgtcgtttgagtgcgacgatgtgttgtt 4396986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 105 - 222
Target Start/End: Complemental strand, 11462579 - 11462462
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||| ||| ||| || | || |||||||| || |||||||||| ||||||||||  || |||  |  ||||| ||||| ||||||||| |    
T  11462579 tttgtgatttcgtcatctaagtccggcattttgttgttcgtcgtcttgtgcggcgtttgatttcacgtcttgtcgcggtgtttgtttagttcctattgga 11462480  T
Q  205 atatcaacttcagtcaat 222  Q
    | ||| || |||||||||    
T  11462479 agatctacatcagtcaat 11462462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 108 - 169
Target Start/End: Original strand, 15836156 - 15836217
Alignment:
Q  108 gtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcg 169  Q
    ||||||| ||||||| |||| ||| ||||||||||| || |||||||| | |||||||||||    
T  15836156 gtgattttgtcgtctaagtgtgacattgtgttgttcgtcgtcttgtgcagcgtttgatttcg 15836217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 198 - 243
Target Start/End: Original strand, 34528784 - 34528829
Alignment:
Q  198 tattgaaatatcaacttcagtcaattacaaattcaatcaataattt 243  Q
    |||||||| |||||||||||||||| ||| ||||||||||| ||||    
T  34528784 tattgaaagatcaacttcagtcaatcacagattcaatcaatgattt 34528829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 194 - 243
Target Start/End: Complemental strand, 36894311 - 36894262
Alignment:
Q  194 ttcctattgaaatatcaacttcagtcaattacaaattcaatcaataattt 243  Q
    ||||| |||||| ||| || |||||||||||||||||||| |||||||||    
T  36894311 ttcctcttgaaagatctacatcagtcaattacaaattcaaccaataattt 36894262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 105 - 170
Target Start/End: Original strand, 39888153 - 39888218
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgt 170  Q
    ||||| |||||||||||| |||||| ||||||| ||||| || |||| ||| | ||||||||||||    
T  39888153 tttgttatttcgtcgtctaagtgcggcgttgtggtgttcttcgtcttctgcagcgtttgatttcgt 39888218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 105 - 142
Target Start/End: Complemental strand, 40488415 - 40488378
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgtt 142  Q
    |||||||||||||||||| ||||||||||||| |||||    
T  40488415 tttgtgatttcgtcgtcttagtgcgacgttgttttgtt 40488378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 83
Target Start/End: Complemental strand, 34878469 - 34878417
Alignment:
Q  31 tttttcccctttcttttaatttaaattagtggatttcacacatatcaaatttt 83  Q
    |||||||  ||||||| ||||||||| ||||| ||||||||||||||| ||||    
T  34878469 tttttccattttctttcaatttaaataagtggttttcacacatatcaagtttt 34878417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 270
Target Start/End: Complemental strand, 35462071 - 35462015
Alignment:
Q  214 tcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    ||||||||||||||||| || |||| ||| ||  ||||||||||||||||| |||||    
T  35462071 tcagtcaattacaaattaaaccaatgattcggacgtcaacgttgcagatccggaagc 35462015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 80; Significance: 1e-37; HSPs: 78)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 107 - 270
Target Start/End: Original strand, 19339135 - 19339298
Alignment:
Q  107 tgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaaat 206  Q
    |||||||| ||||||| |||| ||||||||||||||| ||  ||||||||| |||| |||||  || |||  || | ||||||||| ||||||||||||     
T  19339135 tgtgattttgtcgtctaagtgtgacgttgtgttgttcgtcaacttgtgcggcgtttaatttcacgtcttgtcgtggcgttcgtttagttcctattgaaag 19339234  T
Q  207 atcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    |||||||| ||||||||||||||||||||||| |||| |||||||| |||||||||||||||||    
T  19339235 atcaactttagtcaattacaaattcaatcaatgatttaggtgtcaatgttgcagatccagaagc 19339298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 105 - 270
Target Start/End: Complemental strand, 47042180 - 47042014
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggt-gttgtgttcgtttaattcctattga 203  Q
    |||||||||||||||||| ||| |||||||||||||||| || |||||||||| ||||||||||| ||||| || |  |||||| |||| ||||||||||    
T  47042180 tttgtgatttcgtcgtctaagtacgacgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgtttttgtagcggtgttcatttatttcctattga 47042081  T
Q  204 aatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    || |||| | ||||||| |||||||||||| ||||  |||||| |||||||||| |||||| |||||    
T  47042080 aagatcagcatcagtcagttacaaattcaaccaatggtttgggcgtcaacgttgaagatccggaagc 47042014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 105 - 264
Target Start/End: Original strand, 38545756 - 38545915
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||||||| ||| |||||||||||||||| || |||||||||| ||||||||||| || |||  |  ||||| ||||| || | ||||||    
T  38545756 tttgtgatttcgtcgtctaagtacgacgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgtcttgtcgcggtgtttgtttattttccattgaa 38545855  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatcc 264  Q
    | ||| || |||||||||||||||||||| |||| ||||||| |||||||||| ||||||    
T  38545856 agatcgacatcagtcaattacaaattcaaccaatgatttgggcgtcaacgttgaagatcc 38545915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 105 - 270
Target Start/End: Original strand, 9998424 - 9998589
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||||||| |||||| ||||||||||||| || |||||||||| ||||||||||| ||||||  |  ||||| ||||| ||||| |||||    
T  9998424 tttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgttttgtcgcggtgtttgtttagttcctcttgaa 9998523  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    | ||| || |||||||||||||||||||| |||| |||||   |   |||||||||||||||||||    
T  9998524 agatctacatcagtcaattacaaattcaaccaatgatttgcacgatgacgttgcagatccagaagc 9998589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 105 - 268
Target Start/End: Original strand, 10233027 - 10233190
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||||||| |||||| ||||||||||||| || |||||||||| ||||||||||| ||||||  |  ||||| ||| | ||||| |||||    
T  10233027 tttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgttttgtcgcggtgtttgttcagttcctcttgaa 10233126  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaa 268  Q
    | ||| || |||||||||||||||||||| |||| |||| |  |  ||||||||||||||||||    
T  10233127 agatctacatcagtcaattacaaattcaaccaatgatttagacgataacgttgcagatccagaa 10233190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 105 - 264
Target Start/End: Complemental strand, 12050779 - 12050620
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||||||| || ||| |||| |||||||| || |||||||||| ||||||||||   | |||  |  ||||| ||||| ||||||||| |    
T  12050779 tttgtgatttcgtcgtctaagcgcggcgttttgttgttcgtcgtcttgtgcggcgtttgatttctcctcttgtcgcggtgtttgtttagttcctattgga 12050680  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatcc 264  Q
    ||||| || || ||||||||||||||||| |||| |||||||||||||||||||||||||    
T  12050679 atatctacatcggtcaattacaaattcaaccaatgatttgggtgtcaacgttgcagatcc 12050620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 105 - 263
Target Start/End: Complemental strand, 12149915 - 12149757
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||| ||| |||||| |||||| ||||||||| |||||||| | ||||||||||| || |||  |   |||||||||| |||||||||||    
T  12149915 tttgtgatttcgtcatctaagtgcggcgttgtattgttcatcgtcttgtgcagcgtttgatttcgcgtcttgtcgcgatgttcgtttagttcctattgaa 12149816  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatc 263  Q
    | ||| || ||||||  |||||||||||| |||| ||||||| ||||||||||||||||    
T  12149815 agatcgacatcagtctcttacaaattcaaccaatgatttgggcgtcaacgttgcagatc 12149757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 105 - 270
Target Start/End: Complemental strand, 6954827 - 6954662
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||||||| |||||| |||||| |||||| || |||||||||| ||||||||||| ||||||     ||||| ||| | |||||||||||    
T  6954827 tttgtgatttcgtcgtctaagtgcggcgttgtattgttcgtcgtcttgtgcggcgtttgatttcgcgttttgtcacggtgtttgttcagttcctattgaa 6954728  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    | ||| || |||||||||||||||||||| |||| ||||||  ||||| | ||||||||| |||||    
T  6954727 agatctacatcagtcaattacaaattcaaccaatgatttggacgtcaatgctgcagatccggaagc 6954662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 105 - 270
Target Start/End: Original strand, 10229433 - 10229598
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||| ||| |||||| ||||||||||||| || |||||||||| ||||||||||| ||||||  |  ||||| ||| | ||||| |||||    
T  10229433 tttgtgatttcgtcttctaagtgcggcgttgtgttgttcgtcatcttgtgcggcgtttgatttcgcgttttgtcgcggtgtttgttcagttcctcttgaa 10229532  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    | ||| || |||||||||||||||||||| |||| ||||||  |  ||||||||||||||| ||||    
T  10229533 agatctacatcagtcaattacaaattcaaccaatgatttggacgataacgttgcagatccaaaagc 10229598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 105 - 270
Target Start/End: Complemental strand, 21533940 - 21533775
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    ||||||||||||| ||||  ||||| ||||||||||||| || |||||| ||| ||||| ||||| || |||  |  ||||| ||||| |||||||||||    
T  21533940 tttgtgatttcgttgtctatgtgcggcgttgtgttgttcgtcgtcttgtacggcgtttggtttcgcgtcttgtcgcggtgtttgtttagttcctattgaa 21533841  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    | ||| || |||||| | ||||||||||| |||||||||||| ||||||||||||||||| |||||    
T  21533840 agatctacatcagtcgactacaaattcaaccaataatttgggcgtcaacgttgcagatccggaagc 21533775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 105 - 267
Target Start/End: Original strand, 10108193 - 10108355
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||||||| |||||| ||||||||||||| || |||||||||| ||||||||||| ||||||  |  ||||| | | | ||||| |||||    
T  10108193 tttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgttttgtcgcggtgtttgctcagttcctcttgaa 10108292  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccaga 267  Q
    | ||| || |||||||||||||||||||| |||| |||||   |  |||||||||||||||||    
T  10108293 agatctacatcagtcaattacaaattcaaccaatgatttgaacgataacgttgcagatccaga 10108355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 105 - 263
Target Start/End: Complemental strand, 36461562 - 36461404
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||||||| |||||| ||||||||||||| || |||||||||| ||||||||||| || |||  |  ||||| |||   |||||||||||    
T  36461562 tttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgtcttgtcgcggtgtttgttctgttcctattgaa 36461463  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatc 263  Q
    | ||| || ||| |||||||||||||||| |||| ||||||  ||||||||| ||||||    
T  36461462 agatctacatcaatcaattacaaattcaagcaatgatttggacgtcaacgttacagatc 36461404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 105 - 270
Target Start/End: Complemental strand, 53807991 - 53807824
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcgg---tgtttgatttcgtgttttggtgttgtgttcgtttaattcctatt 201  Q
    |||||||||||||||||| |||||||| ||||||||||| || |||| |||||   |||||||||| |  | ||| || ||||||||||   ||| ||||    
T  53807991 tttgtgatttcgtcgtctaagtgcgaccttgtgttgttcgtcgtcttctgcggcattgtttgatttggcatcttgttgctgtgttcgttgg-ttcatatt 53807893  T
Q  202 gaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    |||| |||||||||||||||| ||| ||||||||||| ||||||  |||||||||||| ||||||||||    
T  53807892 gaaagatcaacttcagtcaatcacagattcaatcaatgatttggacgtcaacgttgcatatccagaagc 53807824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 108 - 269
Target Start/End: Original strand, 8914665 - 8914833
Alignment:
Q  108 gtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcgg---tgtttgatttcgtgttttg----gtgttgtgttcgtttaattcctat 200  Q
    ||||||||||||||| |||||||| ||||||||||| || ||||||||||   |||||||||| || | ||     ||| |||||||||||  ||| |||    
T  8914665 gtgatttcgtcgtcttagtgcgacattgtgttgttcgtcgtcttgtgcggcgctgtttgattttgtatcttttattgtgctgtgttcgtttggttcgtat 8914764  T
Q  201 tgaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaag 269  Q
    ||||| || | |||||| |||| ||||||||||||||| ||||||| ||||||||||||||||||||||    
T  8914765 tgaaagattagcttcagacaatcacaaattcaatcaatgatttgggcgtcaacgttgcagatccagaag 8914833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 108 - 268
Target Start/End: Complemental strand, 12947405 - 12947242
Alignment:
Q  108 gtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcgg---tgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    ||||||||||||| |||||||| | ||||||||||| || ||||||||||   ||||||||||||  | ||| ||| ||||||||||  ||| |||||||    
T  12947405 gtgatttcgtcgtttgagtgcggctttgtgttgttcgtcgtcttgtgcggcgttgtttgatttcgcatcttgttgtggtgttcgtttggttcatattgaa 12947306  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaa 268  Q
    |||||||||||||||||| | | |||||||| || ||||||  | |||| ||||||||||||||    
T  12947305 atatcaacttcagtcaatcatagattcaatcgatgatttggacgccaacattgcagatccagaa 12947242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 105 - 270
Target Start/End: Original strand, 18010977 - 18011142
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    ||||||||| |||  ||| |||| |||||||||||||||||| |||||||||| ||||||||||   | |||     ||||||||||| || ||||||||    
T  18010977 tttgtgattccgttatctaagtgtgacgttgtgttgttcatcatcttgtgcggcgtttgatttcacatcttgtcacggtgttcgtttagtttctattgaa 18011076  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    | ||| |||| ||||||| |||| |||||||||| | ||||| |||||||||||||||||||||||    
T  18011077 agatcgactttagtcaataacaatttcaatcaatcacttgggcgtcaacgttgcagatccagaagc 18011142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 105 - 270
Target Start/End: Complemental strand, 21289952 - 21289780
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcgg---tgtttgatttcg--tgttttggtgtt--gtgttcgtttaattcc 197  Q
    |||||||||||||||||| |||||||||||||| ||||| |  ||||||||||   |||||||||| |  | ||||| |||   ||||||||||  |||     
T  21289952 tttgtgatttcgtcgtcttagtgcgacgttgtggtgttcgttgtcttgtgcggcgttgtttgattttgcatcttttgttgtgcggtgttcgtttggttcg 21289853  T
Q  198 tattgaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    |||||||| |||| |||||| |||| ||||||||||||||| |||| ||||||||||||||||||| ||||||    
T  21289852 tattgaaagatcagcttcagacaatcacaaattcaatcaatgattttggtgtcaacgttgcagatctagaagc 21289780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 104 - 264
Target Start/End: Original strand, 43016811 - 43016971
Alignment:
Q  104 gtttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattga 203  Q
    ||||||||||||||||||  |||||| ||||||||||||| |  ||||||| || ||||||||| |||| |||  |  ||||| ||||| |||||  |||    
T  43016811 gtttgtgatttcgtcgtccaagtgcggcgttgtgttgttcgttatcttgtgtggcgtttgattttgtgtcttgtcgcggtgtttgtttagttccttgtga 43016910  T
Q  204 aatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatcc 264  Q
    || ||| || | |||||||||||||||||| |||| ||||||| |||||||||||||||||    
T  43016911 aagatcgacgttagtcaattacaaattcaaccaatgatttgggcgtcaacgttgcagatcc 43016971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 105 - 270
Target Start/End: Original strand, 48199739 - 48199899
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    ||||||||||||||||||||||| | ||||||||||||| ||   |||||  ||  |||||||||| | ||| ||| ||||||||||  |||||||||||    
T  48199739 tttgtgatttcgtcgtctgagtgtggcgttgtgttgttcgtc---ttgtgacgt--ttgatttcgtatcttgttgtggtgttcgtttggttcctattgaa 48199833  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    | |||||||||| ||||||| ||||| ||||||| ||||||  ||| |||||||| ||||||||||    
T  48199834 agatcaacttcaatcaattataaatttaatcaatgatttggacgtcgacgttgcaaatccagaagc 48199899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 105 - 264
Target Start/End: Complemental strand, 23800041 - 23799882
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||||||| | |||| ||||||||| ||  || |||||||||| ||||||||||| || |||  |  ||||||| ||| ||||| |||||    
T  23800041 tttgtgatttcgtcgtctaattgcggcgttgtgttcttagtcgtcttgtgcggcgtttgatttcgcgtcttgtcgcagtgttcgcttagttcctgttgaa 23799942  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatcc 264  Q
    | | | ||  |||||||||||||||||||||||| |||| || |||||||||||||||||    
T  23799941 agaacgacaccagtcaattacaaattcaatcaatgatttcggcgtcaacgttgcagatcc 23799882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 105 - 270
Target Start/End: Original strand, 32701450 - 32701613
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||| ||||||||||| |||||| |||||| ||||   || |||||||||| ||||||||||| |||||| ||   |||| ||| | |||||||||||    
T  32701450 tttgtgctttcgtcgtctaagtgcggcgttgtattgtg--tcgtcttgtgcggcgtttgatttcgcgttttgttgcgatgtttgttcagttcctattgaa 32701547  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    | ||| || |||  |||||||||||||||||||| ||||||| |||||||||| |||||| |||||    
T  32701548 agatctacatcaaccaattacaaattcaatcaatgatttgggcgtcaacgttgtagatccggaagc 32701613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 111 - 264
Target Start/End: Original strand, 35175364 - 35175520
Alignment:
Q  111 atttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcgg---tgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaaata 207  Q
    |||||||||||||||| |||| |||||||||||||| |||||||| |   ||||||||||| ||| ||| ||  ||||||||||  ||  |||||||| |    
T  35175364 atttcgtcgtctgagtacgacattgtgttgttcatcgtcttgtgcagcgttgtttgatttcatgtcttgttgcggtgttcgtttggtttatattgaaaga 35175463  T
Q  208 tcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatcc 264  Q
    ||| ||||||||||| ||| ||||||||||| ||||||   ||||||||||||||||    
T  35175464 tcagcttcagtcaatcacatattcaatcaatgatttggacatcaacgttgcagatcc 35175520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 105 - 262
Target Start/End: Complemental strand, 20465101 - 20464944
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    ||||||||||| |||||| |||| |  |||||||||||| || |||||| ||| ||||||||| | || |||  |  |||||| ||||| ||||||||||    
T  20465101 tttgtgatttcatcgtctaagtgaggtgttgtgttgttcgtcgtcttgtacggcgtttgattttgcgtcttgtcgcggtgttcatttaaatcctattgaa 20465002  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagat 262  Q
    | ||| | |||||||||||||||||||||| ||| ||||||| ||||| |||||||||    
T  20465001 agatcgatttcagtcaattacaaattcaataaatgatttgggcgtcaatgttgcagat 20464944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 105 - 270
Target Start/End: Complemental strand, 20609030 - 20608865
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||||||| | |||| ||||||||||||  || ||||||||||  |||||||| | || |||  |  ||||| ||||| |||||||||||    
T  20609030 tttgtgatttcgtcgtctaattgcggcgttgtgttgttagtcgtcttgtgcggcatttgattttgcgtcttgtcgcggtgtttgtttagttcctattgaa 20608931  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    |||||||| | ||||| |||||| |||||||||| ||||| |  |||| ||||||||||| |||||    
T  20608930 atatcaacattagtcatttacaagttcaatcaatgatttgagcatcaaagttgcagatccggaagc 20608865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 108 - 265
Target Start/End: Original strand, 41818169 - 41818332
Alignment:
Q  108 gtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcgg---tgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||| |||| |||||||||| ||||||||||| || ||||||||||   |||||||||||| || ||| |||  |||||||||  |||||||||||    
T  41818169 gtgatttcatcgtatgagtgcgacattgtgttgttcgtcgtcttgtgcggtattgtttgatttcgcgtcttgttgtgatgttcgttt-gttcctattgaa 41818267  T
Q  205 atatcaacttcagtcaa----ttacaaattcaatcaataatttgggtgtcaacgttgcagatcca 265  Q
    | |||||||||| ||||    ||||||||||||||||| |||||  |||||| ||||||||||||    
T  41818268 agatcaacttcaatcaatcatttacaaattcaatcaatgatttgaatgtcaatgttgcagatcca 41818332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 105 - 270
Target Start/End: Complemental strand, 43488721 - 43488556
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||||||| |||| | ||||||||||||| || |||||||||| ||||||||||| || ||| ||  ||||| ||| | || ||||||||    
T  43488721 tttgtgatttcgtcgtctaagtgtggcgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgtcttgttgcggtgtttgttcagtttctattgaa 43488622  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    |||||  | | | ||||||| |||||||| |||| |||||   ||||||||||||||||| |||||    
T  43488621 atatctgcattaatcaattataaattcaagcaatgatttgaacgtcaacgttgcagatccggaagc 43488556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 105 - 270
Target Start/End: Complemental strand, 45568576 - 45568411
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||||||| |||||| ||||||||||||| || ||||||| || ||||||||||| || |||     ||||| ||| | ||||| |||||    
T  45568576 tttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgtggcgtttgatttcgcgtcttgtcacggtgtttgttcagttcctgttgaa 45568477  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    ||| | || ||| |||||||||||||||| |||| ||||||  |||||| |||||||||| |||||    
T  45568476 ataactacatcaatcaattacaaattcaaacaatgatttggacgtcaactttgcagatccggaagc 45568411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 105 - 270
Target Start/End: Original strand, 53099747 - 53099912
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||||||| | || ||||||||||||||  || |||||||||| ||||||||||  || |||  |  || ||| |||| |||||||||||    
T  53099747 tttgtgatttcgtcgtctaattgtgacgttgtgttgttagtcatcttgtgcggcgtttgatttcacgtcttgtcgccgtattcatttagttcctattgaa 53099846  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    | |||| | | |||||||||||| |||||||||| ||||||| ||||||||| || |||| |||||    
T  53099847 agatcagcatgagtcaattacaagttcaatcaatgatttgggcgtcaacgttacatatccggaagc 53099912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 105 - 238
Target Start/End: Original strand, 1649374 - 1649509
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtt--tgatttcgtgttttggtgttgtgttcgtttaattcctattg 202  Q
    ||||||||||||||||||||||| | |||||| ||||||  | ||||||||||||||  |||||||| || ||| || ||||||| |||| |||||||||    
T  1649374 tttgtgatttcgtcgtctgagtgtggcgttgtattgttctccgtcttgtgcggtgttgttgatttcgcgtcttgttgatgtgttcttttagttcctattg 1649473  T
Q  203 aaatatcaacttcagtcaattacaaattcaatcaat 238  Q
    ||| ||| ||||||| |||||||| ||| |||||||    
T  1649474 aaagatcgacttcagacaattacagatttaatcaat 1649509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 105 - 263
Target Start/End: Complemental strand, 35865063 - 35864905
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||||||| | |||| ||||||||||||  || ||||||| || ||||||||| | || ||   |  ||||||||||| |||||||||||    
T  35865063 tttgtgatttcgtcgtctaattgcggcgttgtgttgttagtcgtcttgtgtggcgtttgattttgcgtcttttcgcggtgttcgtttagttcctattgaa 35864964  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatc 263  Q
    | ||| || ||| ||||||||||||||||||||| ||||||  || ||| |||||||||    
T  35864963 agatcgacatcaatcaattacaaattcaatcaatgatttggacgttaacattgcagatc 35864905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 105 - 270
Target Start/End: Original strand, 40487282 - 40487447
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtg-tttgatttcgtgttttggtgttgtgttcgtttaattcctattga 203  Q
    |||||||||||||||||| |||||| ||||||||||||| || |||||||||| | |||||||||| || |||  |  ||||| ||| | ||||||||||    
T  40487282 tttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgttttgatttcgcgtcttgtcgcggtgtttgttcagttcctattga 40487381  T
Q  204 aatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    || ||| || |||||||| ||||||||||  |||| ||||||  |||||| |||||||||| |||||    
T  40487382 aagatctacatcagtcaa-tacaaattcagccaatgatttggacgtcaacattgcagatccggaagc 40487447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 105 - 263
Target Start/End: Complemental strand, 48650865 - 48650707
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||| ||||||| |||||| | ||||||||||| |  ||||||||||  |||||||||| || |||  |  ||||| ||| | |||||||||||    
T  48650865 tttgtgattttgtcgtctaagtgcggcattgtgttgttcgttgtcttgtgcggcatttgatttcgcgtcttgtcgcggtgtttgttcagttcctattgaa 48650766  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatc 263  Q
    | |||  | ||| |||||||||||||||| |||||||||||  ||||||||||||||||    
T  48650765 agatctgcatcaatcaattacaaattcaaccaataatttggacgtcaacgttgcagatc 48650707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 108 - 264
Target Start/End: Original strand, 29239300 - 29239459
Alignment:
Q  108 gtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcgg---tgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||| ||||||||||||| ||||||||||||| || ||||||||||   |||||||||||  || ||| ||| ||||||||||  ||| ||||| |    
T  29239300 gtgatttcatcgtctgagtgcggcgttgtgttgttcgtcgtcttgtgcggcgctgtttgatttcacgtcttgttgtggtgttcgtttggttcgtattgga 29239399  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatcc 264  Q
    | |||| ||||||||||| ||| ||| ||||||| ||||||  ||| |||||| ||||||    
T  29239400 agatcagcttcagtcaatcacagatttaatcaatgatttggacgtcgacgttgtagatcc 29239459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 105 - 270
Target Start/End: Complemental strand, 52923248 - 52923083
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||| ||||| ||||||| |||| | || |||||||||| || |||||||||| ||||||||||| ||||||  |  ||||| ||| | ||||| |||||    
T  52923248 tttgggattttgtcgtctaagtgtggcgctgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgttttgtcgcggtgtttgttcagttcctcttgaa 52923149  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    | ||| |  | |||||||||||||||||| |||| ||||||  ||||||||||||||||| |||||    
T  52923148 agatctatattagtcaattacaaattcaaccaatgatttggacgtcaacgttgcagatccggaagc 52923083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 131 - 270
Target Start/End: Original strand, 33579863 - 33580002
Alignment:
Q  131 cgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaaatatcaacttcagtcaattacaaatt 230  Q
    ||||||||||||| || ||||||||   ||||||||| | || |||  |  ||||||||||| ||| |||||||| ||| || |||||||||||||||||    
T  33579863 cgttgtgttgttcgtcgtcttgtgcatcgtttgattttgcgtcttgtcgcggtgttcgtttatttcatattgaaagatcgacatcagtcaattacaaatt 33579962  T
Q  231 caatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    ||| |||| ||||||| |||||||||| |||||| |||||    
T  33579963 caaccaatgatttgggcgtcaacgttgaagatccggaagc 33580002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 108 - 270
Target Start/End: Original strand, 42460706 - 42460871
Alignment:
Q  108 gtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcgg---tgtttgatttcg--tgttttggtgtt--gtgttcgtttaattcctat 200  Q
    ||||||||||||||| ||||||   |||||||||||||| ||||||||||   |||||||||||   | ||||| |||   ||||||||||  ||| |||    
T  42460706 gtgatttcgtcgtcttagtgcg---ttgtgttgttcatcgtcttgtgcggcgttgtttgatttcacatcttttgttgtgcggtgttcgtttggttcgtat 42460802  T
Q  201 tgaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    | ||||||||||||||| || | ||||||||||||||| ||||||| ||||||||||||||| |||||||    
T  42460803 tcaaatatcaacttcagaca-tcacaaattcaatcaatgatttgggcgtcaacgttgcagatacagaagc 42460871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 105 - 270
Target Start/End: Original strand, 14859447 - 14859612
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||| ||||||||||||  |||||||||||| || ||||||| |   ||| |||| |  | ||| ||  |||||| |||  ||| |||||||    
T  14859447 tttgtgatttcgccgtctgagtgcggtgttgtgttgttcgtcatcttgtgtgacatttaattttgcatcttgttgcggtgttcatttggttcatattgaa 14859546  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    | |||| ||||| ||||| ||| ||||||||||| ||||||  |||||||||||||||||||||||    
T  14859547 agatcagcttcaatcaatcacatattcaatcaatgatttggacgtcaacgttgcagatccagaagc 14859612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 108 - 270
Target Start/End: Original strand, 16235379 - 16235548
Alignment:
Q  108 gtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcgg---tgtttgatttcg--tgttttg--gtgttgtgttcgtttaattcctat 200  Q
    |||||||| |||||| ||||||||||||||||||||  | ||||||||||   ||||||||||||  | |||||  |||| ||| ||||||  ||| |||    
T  16235379 gtgatttcatcgtcttagtgcgacgttgtgttgttcgccgtcttgtgcggcgttgtttgatttcgcattttttgttgtgtggtgctcgtttggttcgtat 16235478  T
Q  201 tgaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    ||||| || |  || || |||| ||||||||||||||| ||||||| |||||||||||||||| ||||||    
T  16235479 tgaaagattagttttagacaatcacaaattcaatcaatgatttgggcgtcaacgttgcagatcaagaagc 16235548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 159 - 264
Target Start/End: Original strand, 45424809 - 45424914
Alignment:
Q  159 gtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgc 258  Q
    ||||||||||| || ||| ||  ||||| ||||| |||||||||||| ||| || || |||||||||||||||||||||| ||||||| |||||| ||||    
T  45424809 gtttgatttcgcgtattgttgcggtgtttgtttagttcctattgaaaaatcgacatcggtcaattacaaattcaatcaatgatttgggcgtcaacattgc 45424908  T
Q  259 agatcc 264  Q
    ||||||    
T  45424909 agatcc 45424914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 105 - 270
Target Start/End: Original strand, 47896109 - 47896274
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||||||  |||| | ||||||||||||| |  |||||||||| ||||||||||  || |||  |  || || ||||| |||||||||||    
T  47896109 tttgtgatttcgtcgtcaaagtgtggcgttgtgttgttcgttgtcttgtgcggcgtttgatttcacgtcttgtcgcggtatttgtttagttcctattgaa 47896208  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    | ||  || |||||||||||||||||||| |||| ||||||| || || |||||| |||| |||||    
T  47896209 agatttacatcagtcaattacaaattcaaccaatgatttgggcgtaaatgttgcatatccggaagc 47896274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 108 - 270
Target Start/End: Complemental strand, 51303778 - 51303609
Alignment:
Q  108 gtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtt---tgatttcg--tgttttggtgtt--gtgttcgtttaattcctat 200  Q
    ||||||||||||| | |||||||||||||||||||  || |||| || ||||||   ||||||||  | ||||| |||   ||||||||||  ||  |||    
T  51303778 gtgatttcgtcgttttagtgcgacgttgtgttgtttgtcgtcttatgaggtgttgtttgatttcgcatcttttgttgtgcggtgttcgtttggtttgtat 51303679  T
Q  201 tgaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    ||||| |||| |||| | |||| ||||||||||||||| ||||||| |||||||||||||||||||||||    
T  51303678 tgaaagatcagcttctgacaatcacaaattcaatcaatgatttgggcgtcaacgttgcagatccagaagc 51303609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 108 - 270
Target Start/End: Original strand, 51923680 - 51923849
Alignment:
Q  108 gtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtt---tgatttcgtgt--tttggtgtt--gtgttcgtttaattcctat 200  Q
    ||||||||||||||| |||| ||||||||||||||| || |||||||||| |||   |||||| |  |  |||| |||   ||||||||||  ||| |||    
T  51923680 gtgatttcgtcgtcttagtgtgacgttgtgttgttcgtcatcttgtgcggcgttatttgattttgcatcatttgttgtgcggtgttcgtttggttcgtat 51923779  T
Q  201 tgaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    ||||| |||| |||||| ||||  |||||||||||||| ||||||  |||||||||||||||||||||||    
T  51923780 tgaaagatcagcttcagacaatcgcaaattcaatcaatgatttggacgtcaacgttgcagatccagaagc 51923849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 107 - 270
Target Start/End: Original strand, 40556671 - 40556824
Alignment:
Q  107 tgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaaat 206  Q
    |||||||||||||||| |||||| ||||||||||||| || |||||||||| ||||||||||| |          ||||| ||| | ||||| ||||||     
T  40556671 tgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcg----------gtgtttgttcagttcctcttgaaag 40556760  T
Q  207 atcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    ||| || |||||||||||||||||||| |||| ||||||  |||||||||| | |||| |||||    
T  40556761 atctacatcagtcaattacaaattcaaccaatgatttggacgtcaacgttgtaaatccggaagc 40556824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 182 - 270
Target Start/End: Complemental strand, 46304574 - 46304486
Alignment:
Q  182 gtgttcgtttaattcctattgaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    ||||| ||||| |||||||||||||||| || |||||||||||||||||||| |||| |||| || |||||| |||||||||| |||||    
T  46304574 gtgtttgtttagttcctattgaaatatctacatcagtcaattacaaattcaaccaatgatttaggcgtcaacattgcagatccggaagc 46304486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 108 - 270
Target Start/End: Original strand, 7546567 - 7546737
Alignment:
Q  108 gtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcgg---tgtttgatttcg---tgttttg--gtgttgtgttcgtttaattccta 199  Q
    ||||||||||||||| |||||||||||||||||||| || ||||||||||   ||||||||||||   |  ||||  |||  ||||||||||  ||| ||    
T  7546567 gtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtcttgtgcggcgttgtttgatttcgcaatcctttgttgtgcggtgttcgtttggttcgta 7546666  T
Q  200 ttgaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    |||||| ||||  ||||| |||| ||||||||| ||||| ||||| | ||||||||||| |||||| ||||    
T  7546667 ttgaaagatcagtttcagacaatcacaaattcagtcaatgatttgagcgtcaacgttgccgatccaaaagc 7546737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 105 - 264
Target Start/End: Complemental strand, 38860251 - 38860086
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||||||| ||||||||||| |||||||| || |||||||||| | ||||||||| || |||  |  ||||| ||||| ||||||||| |    
T  38860251 tttgtgatttcgtcgtctaagtgcgacgttttgttgttcgtcgtcttgtgcggcgattgatttcgcgtcttgtcgcggtgtttgtttagttcctattgga 38860152  T
Q  205 ------atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatcc 264  Q
          | ||| || |||||| ||||||||||||| |||| | ||||  |||||||||||||||||    
T  38860151 agatctacatctacatcagtcgattacaaattcaaccaatgacttggtcgtcaacgttgcagatcc 38860086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 105 - 270
Target Start/End: Original strand, 54148948 - 54149113
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctct-tgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattga 203  Q
    |||||||||||||||||| |||||| | ||||||||||| || |||  ||||||  |||||||||| || |||  |  ||||| ||||| ||||||||||    
T  54148948 tttgtgatttcgtcgtctaagtgcggcattgtgttgttcgtcgtctaagtgcggcatttgatttcgcgtattgtcgcggtgtttgtttagttcctattga 54149047  T
Q  204 aatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    || ||| || ||| || ||||||||||  | |||| ||||||| ||||||||||||||||| |||||    
T  54149048 aagatctacatcaatc-attacaaatttcaccaatgatttgggcgtcaacgttgcagatccggaagc 54149113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 121 - 264
Target Start/End: Complemental strand, 26716226 - 26716079
Alignment:
Q  121 ctgagtgcgacgttgtgttgttcatcctctt-gtgcggtgtt---tgatttcgtgttttggtgttgtgttcgtttaattcctattgaaatatcaacttca 216  Q
    |||||||||||||||||||||||||  |||| ||||| ||||   | |||| || | ||| ||  |||||||||| ||| ||||||||| || | |||||    
T  26716226 ctgagtgcgacgttgtgttgttcattatctttgtgcgatgttgtttaattttgtatcttgttgcggtgttcgtttgatttctattgaaagattagcttca 26716127  T
Q  217 gtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatcc 264  Q
    |||||| | ||||||||||||| |||| || |||||||||||||||||    
T  26716126 gtcaatcataaattcaatcaatgattttggcgtcaacgttgcagatcc 26716079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 108 - 270
Target Start/End: Original strand, 53508182 - 53508348
Alignment:
Q  108 gtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtt---tgatttcgt-gttttggtgttgtgttcgtttaattcctattga 203  Q
    ||||||||||||||||| |||| ||||||||||||| || |||||| || ||||   |||||||   |||||| ||  ||||||||||  ||||||||||    
T  53508182 gtgatttcgtcgtctgaatgcggcgttgtgttgttcgtcgtcttgtacgatgttgtttgatttccccgttttgttgcagtgttcgtttggttcctattga 53508281  T
Q  204 aatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    || ||||| | |||| ||| ||| ||||||||||| ||||||  |||||| ||||| ||||| ||||    
T  53508282 aagatcaaatccagttaatcacagattcaatcaatgatttggacgtcaactttgcacatccaaaagc 53508348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 107 - 228
Target Start/End: Original strand, 46220639 - 46220750
Alignment:
Q  107 tgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaaat 206  Q
    |||||||||||| ||| | |||||||||||||||||  || ||||||| | |||||||||||| |          ||||||||||| |||||||||||||    
T  46220639 tgtgatttcgtcatctaattgcgacgttgtgttgttagtcatcttgtgtgatgtttgatttcgcg----------gtgttcgtttagttcctattgaaat 46220728  T
Q  207 atcaacttcagtcaattacaaa 228  Q
    |||||| |||||||||||||||    
T  46220729 atcaacatcagtcaattacaaa 46220750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 105 - 270
Target Start/End: Complemental strand, 9797660 - 9797500
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||||||| |||||| ||||||     || || |||||||||| ||||||||| | || |||  |  ||||| ||| | |||||||||||    
T  9797660 tttgtgatttcgtcgtctaagtgcggcgttgt-----tcgtcgtcttgtgcggcgtttgattttgcgtcttgtcgcggtgtttgttcagttcctattgaa 9797566  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    | ||| || ||| |||||||||||||||| |||| |||||   || |||||||||||||| |||||    
T  9797565 agatctacatcaatcaattacaaattcaagcaatgatttgaacgttaacgttgcagatccggaagc 9797500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 108 - 270
Target Start/End: Complemental strand, 27706361 - 27706192
Alignment:
Q  108 gtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcgg---tgtttgatttcg--tgttttg--gtgttgtgttcgtttaattcctat 200  Q
    ||||||||||||||| |||| ||||||||||||||| || ||||||||||   ||||| ||||||  | |||||  |||  ||||||||||  ||| |||    
T  27706361 gtgatttcgtcgtcttagtgtgacgttgtgttgttcgtcgtcttgtgcggcgttgtttaatttcgcatcttttgttgtgcggtgttcgtttggttcgtat 27706262  T
Q  201 tgaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    ||||| |||| |||    |||| ||||||||||||||| |||| || |||||||||||| ||||| ||||    
T  27706261 tgaaagatcagcttttaacaatcacaaattcaatcaatgatttcggcgtcaacgttgcatatccacaagc 27706192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 108 - 268
Target Start/End: Original strand, 29922014 - 29922177
Alignment:
Q  108 gtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtg---cggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||||||||| | ||||||||||||   | |||||||   ||  ||||||||||| || ||| ||  ||||   |||  ||| |||||||    
T  29922014 gtgatttcgtcgtctgagtgtggcgttgtgttgtttcccgtcttgtgtgacgtcgtttgatttcgcgtcttgttgcggtgtatatttcgttcatattgaa 29922113  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaa 268  Q
    | ||||||||||  |||| ||| ||||||||||| ||||||  |||||||||||||||||||||    
T  29922114 agatcaacttcaaccaatcacatattcaatcaatgatttggacgtcaacgttgcagatccagaa 29922177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 108 - 268
Target Start/End: Original strand, 29971167 - 29971330
Alignment:
Q  108 gtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtg---cggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||||||||| | ||||||||||||   | |||||||   ||  ||||||||||| || ||| ||  ||||   |||  ||| |||||||    
T  29971167 gtgatttcgtcgtctgagtgtggcgttgtgttgtttcccgtcttgtgtgacgtcgtttgatttcgcgtcttgttgcggtgtatatttcgttcatattgaa 29971266  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaa 268  Q
    | ||||||||||  |||| ||| ||||||||||| ||||||  |||||||||||||||||||||    
T  29971267 agatcaacttcaaccaatcacatattcaatcaatgatttggacgtcaacgttgcagatccagaa 29971330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 182 - 270
Target Start/End: Original strand, 21431647 - 21431735
Alignment:
Q  182 gtgttcgtttaattcctattgaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    ||||| ||| |||| ||||||||| ||| || |||||||||||||||||||| |||  ||||||  ||||||||||||||||| |||||    
T  21431647 gtgtttgttcaatttctattgaaagatctacatcagtcaattacaaattcaaccaacgatttggacgtcaacgttgcagatccggaagc 21431735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 105 - 233
Target Start/End: Complemental strand, 44960083 - 44959955
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||||||| ||||||  ||||| || ||| || |||||||||| ||||||||| | ||||||  || ||||| ||| | ||  |||||||    
T  44960083 tttgtgatttcgtcgtctaagtgcggtgttgtattattcgtcgtcttgtgcggcgtttgattttgcgttttgtcgtggtgtttgttcagtttttattgaa 44959984  T
Q  205 atatcaacttcagtcaattacaaattcaa 233  Q
    | ||| || ||||| ||||||||||||||    
T  44959983 agatctacatcagttaattacaaattcaa 44959955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 104 - 270
Target Start/End: Complemental strand, 629045 - 628889
Alignment:
Q  104 gtttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattga 203  Q
    ||||||||||||||||||| |||||||| |||||||||||||| |         |||||||||| |  | ||| ||  |||||||||   ||| ||||||    
T  629045 gtttgtgatttcgtcgtctaagtgcgaccttgtgttgttcatcgt---------tgtttgatttggaatcttgttgcggtgttcgttgg-ttcatattga 628956  T
Q  204 aatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    || |||| ||||||||||| ||| ||||||||||| ||||||   ||||||||| ||||||||||||    
T  628955 aagatcagcttcagtcaatcacagattcaatcaatgatttggacatcaacgttgtagatccagaagc 628889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 105 - 263
Target Start/End: Complemental strand, 20987930 - 20987772
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||||||| | ||||  |||||||| ||  || ||||||| ||  |||||||||| || |||  |   |||| ||||| |||||||||||    
T  20987930 tttgtgatttcgtcgtctaattgcggtgttgtgttcttagtcgtcttgtgtggcatttgatttcgcgtcttgtcgcgatgtttgtttagttcctattgaa 20987831  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatc 263  Q
    | ||| || || ||||||||||| ||  |||||| ||||||| ||||||||| ||||||    
T  20987830 agatcgacatcggtcaattacaagttacatcaatgatttgggagtcaacgttacagatc 20987772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 105 - 270
Target Start/End: Complemental strand, 31271938 - 31271775
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    ||||||||||| |||||| ||||||   ||||||||||| || ||||||||||  |||||||||| || |||  |  |  |||||||| ||| ||| |||    
T  31271938 tttgtgatttcttcgtctaagtgcggttttgtgttgttcgtcgtcttgtgcggcatttgatttcgcgtcttgtcgcggcattcgtttagttcatatggaa 31271839  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    | ||| |||||||| ||  ||||||||||||||  ||||||| ||||||  ||||||||| |||||    
T  31271838 agatcgacttcagttaa--acaaattcaatcaaagatttgggcgtcaacaatgcagatccggaagc 31271775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 182 - 255
Target Start/End: Complemental strand, 7887497 - 7887424
Alignment:
Q  182 gtgttcgtttaattcctattgaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgt 255  Q
    ||||||||||| |||||||||||| ||||||||||| |||| ||| |||| || ||| ||||||| ||||||||    
T  7887497 gtgttcgtttagttcctattgaaagatcaacttcagacaatcacatattcgattaatgatttgggcgtcaacgt 7887424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 182 - 255
Target Start/End: Original strand, 21313070 - 21313143
Alignment:
Q  182 gtgttcgtttaattcctattgaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgt 255  Q
    ||||||||||| || |||||||||||||    ||||||||||||||||||||||||| ||||||  ||||||||    
T  21313070 gtgttcgtttagtttctattgaaatatcggtatcagtcaattacaaattcaatcaatgatttggacgtcaacgt 21313143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 109 - 192
Target Start/End: Original strand, 25842634 - 25842720
Alignment:
Q  109 tgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcgg---tgtttgatttcgtgttttggtgttgtgttcgttta 192  Q
    |||||| ||||| ||||||||||||||||||||||||| |||| |||||   |||||||||||  || ||| ||| |||||||||||    
T  25842634 tgattttgtcgtttgagtgcgacgttgtgttgttcatcatcttctgcggtattgtttgatttctcgtcttgttgtggtgttcgttta 25842720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 183 - 262
Target Start/End: Complemental strand, 26275872 - 26275793
Alignment:
Q  183 tgttcgtttaattcctattgaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagat 262  Q
    |||||||||| |||||| ||||| ||| || |||||||  |||||||||||||||| |||| | ||| ||||||||||||    
T  26275872 tgttcgtttagttcctagtgaaagatcgacatcagtcatatacaaattcaatcaatgattttgttgttaacgttgcagat 26275793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 153 - 264
Target Start/End: Original strand, 45425597 - 45425708
Alignment:
Q  153 tgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaa 252  Q
    ||||| ||||||||||| || |||  |  ||||| ||||| |||| ||||||| ||| |  ||| ||||||||||||||||||||| |||||||  ||||    
T  45425597 tgcggcgtttgatttcgcgtattgtcgcggtgtttgtttagttcccattgaaagatcgaaatcaatcaattacaaattcaatcaatgatttgggcttcaa 45425696  T
Q  253 cgttgcagatcc 264  Q
    | ||||||||||    
T  45425697 cattgcagatcc 45425708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 105 - 143
Target Start/End: Original strand, 27856137 - 27856175
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttc 143  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  27856137 tttgtgatttcgtcgtctgagtgcgacattgtgttgttc 27856175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 214 - 270
Target Start/End: Complemental strand, 7448936 - 7448880
Alignment:
Q  214 tcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    |||||||||||||||||||| |||| ||||||  |||||||||||| |||| |||||    
T  7448936 tcagtcaattacaaattcaaccaatgatttggacgtcaacgttgcatatccggaagc 7448880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 214 - 270
Target Start/End: Complemental strand, 7457078 - 7457022
Alignment:
Q  214 tcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    |||||||||||||||||||| |||| ||||||  |||||||||||| |||| |||||    
T  7457078 tcagtcaattacaaattcaaccaatgatttggacgtcaacgttgcatatccggaagc 7457022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 194 - 246
Target Start/End: Original strand, 32246493 - 32246545
Alignment:
Q  194 ttcctattgaaatatcaacttcagtcaattacaaattcaatcaataatttggg 246  Q
    |||||||||||| |||||||||||| ||| ||| ||||||||||| |||||||    
T  32246493 ttcctattgaaagatcaacttcagttaatcacatattcaatcaatgatttggg 32246545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 270
Target Start/End: Complemental strand, 50194389 - 50194301
Alignment:
Q  182 gtgttcgtttaattcctattgaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    ||||||||||  ||| |||||||| | || ||||||||||| ||| |||||||| || ||||||  || |||||||||||||| |||||    
T  50194389 gtgttcgtttgtttcatattgaaagaccagcttcagtcaatcacagattcaatcgatgatttggacgttaacgttgcagatccggaagc 50194301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 245
Target Start/End: Original strand, 51487063 - 51487207
Alignment:
Q  108 gtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcgg---tgtttgatttcg--tgttttg--gtgttgtgttcgtttaattcctat 200  Q
    ||||||||||| ||| |||| ||||||||||||||| || ||||||||||   ||||||||||||  | |||||  |||| |||||  |||  ||| |||    
T  51487063 gtgatttcgtcatcttagtgggacgttgtgttgttcgtcgtcttgtgcggcgttgtttgatttcgtatcttttgttgtgtggtgtttttttggttcatat 51487162  T
Q  201 tgaaatatcaacttcagtcaattacaaattcaatcaataatttgg 245  Q
    ||||| ||||||||| | |||| ||| ||||||| ||| ||||||    
T  51487163 tgaaagatcaacttcggacaatcacagattcaattaatgatttgg 51487207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 108 - 143
Target Start/End: Original strand, 4019694 - 4019729
Alignment:
Q  108 gtgatttcgtcgtctgagtgcgacgttgtgttgttc 143  Q
    ||||||||||||||| ||||||||||||||||||||    
T  4019694 gtgatttcgtcgtcttagtgcgacgttgtgttgttc 4019729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 264
Target Start/End: Original strand, 19619784 - 19619830
Alignment:
Q  218 tcaattacaaattcaatcaataatttgggtgtcaacgttgcagatcc 264  Q
    |||||||||| |||||||||| |||| ||||||||||||| ||||||    
T  19619784 tcaattacaagttcaatcaatgatttaggtgtcaacgttgtagatcc 19619830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 224
Target Start/End: Original strand, 26446944 - 26446986
Alignment:
Q  182 gtgttcgtttaattcctattgaaatatcaacttcagtcaatta 224  Q
    |||||||||||||||||||||||| ||||||| || |||||||    
T  26446944 gtgttcgtttaattcctattgaaagatcaactccaatcaatta 26446986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 143
Target Start/End: Original strand, 53426894 - 53426932
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttc 143  Q
    |||||||||||||||||| ||||||||||| ||||||||    
T  53426894 tttgtgatttcgtcgtcttagtgcgacgttttgttgttc 53426932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 105 - 162
Target Start/End: Original strand, 21431582 - 21431639
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgttt 162  Q
    |||||||||||| ||||| |||||| | ||||||||||| || |||||||||| ||||    
T  21431582 tttgtgatttcgccgtctaagtgcggcattgtgttgttcgtcgtcttgtgcggcgttt 21431639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 213 - 270
Target Start/End: Original strand, 27066019 - 27066076
Alignment:
Q  213 ttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    |||||| ||||||||||||||||||| ||||| | |||||| ||| |||||| |||||    
T  27066019 ttcagttaattacaaattcaatcaattatttgagcgtcaacattgtagatccggaagc 27066076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 105 - 233
Target Start/End: Complemental strand, 36910771 - 36910643
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggt-gttgtgttcgtttaattcctattga 203  Q
    |||||||||||| | ||| |||||| |||| |||||||| || |||||||||| ||||||||||| || ||| | |  ||||  ||| | ||||||||||    
T  36910771 tttgtgatttcgcc-tctaagtgcggcgttttgttgttcgtcgtcttgtgcggcgtttgatttcgcgtcttgttcgcggtgtctgttcagttcctattga 36910673  T
Q  204 aatatcaacttcagtcaattacaaattcaa 233  Q
    || ||  || ||| ||||||||||||||||    
T  36910672 aagatgtacatcaatcaattacaaattcaa 36910643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 238
Target Start/End: Original strand, 27856210 - 27856254
Alignment:
Q  194 ttcctattgaaatatcaacttcagtcaattacaaattcaatcaat 238  Q
    |||||||||||| || ||||||||| ||| |||||||||||||||    
T  27856210 ttcctattgaaagattaacttcagtaaataacaaattcaatcaat 27856254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 105 - 270
Target Start/End: Original strand, 1302 - 1467
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    ||||||||||| |||||| |||||| ||||||||||||| || ||||||| || ||||||||||| || ||| ||  ||||||||||| |||||||||||    
T  1302 tttgtgatttcttcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgtggcgtttgatttcgcgtcttgttgcggtgttcgtttagttcctattgaa 1401  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    | |||  | |||||||||||||||||| | |||||||||||| ||||||||||||| || ||||||    
T  1402 agatcggcatcagtcaattacaaattcgaccaataatttgggcgtcaacgttgcagttctagaagc 1467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 78; Significance: 2e-36; HSPs: 48)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 105 - 270
Target Start/End: Original strand, 23128577 - 23128742
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    ||||||||||| |||||| |||||| ||||||||||||| || ||||||| || ||||||||||| ||||||  |  ||||| ||| | ||| |||||||    
T  23128577 tttgtgatttcatcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgtggcgtttgatttcgcgttttgtcgcagtgtttgttcagttcttattgaa 23128676  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    | |||||| ||||||||||||||||||||||||| |||||| ||||||||||| |||||| |||||    
T  23128677 agatcaacatcagtcaattacaaattcaatcaatgatttggatgtcaacgttgtagatccggaagc 23128742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 105 - 270
Target Start/End: Complemental strand, 33053299 - 33053134
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||||||| |||||| ||||||||||||| || |||||||||| ||||||||||| ||||||  |  ||||| ||| | ||||| |||||    
T  33053299 tttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgttttgtcgcggtgtttgttcagttcctcttgaa 33053200  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    | ||| || |||||||||||||||||||| |||| |||||   ||||||||||||||||| |||||    
T  33053199 agatctacatcagtcaattacaaattcaaccaatgatttgaacgtcaacgttgcagatccggaagc 33053134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 105 - 264
Target Start/End: Original strand, 606163 - 606322
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||||||| |||||| ||||||||||||| || |||||||||| |||||||||||  |||||  |  ||||| ||| | |||||||||||    
T  606163 tttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcatcttgtgcggcgtttgatttcgcattttgtcgcggtgtttgttcagttcctattgaa 606262  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatcc 264  Q
    | ||| || ||||||||||| |||||||| |||| ||||||   ||||||||||||||||    
T  606263 agatctacatcagtcaattataaattcaaccaatgatttggacatcaacgttgcagatcc 606322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 105 - 263
Target Start/End: Complemental strand, 30608646 - 30608488
Alignment:
Q  105 tttgtgatttcgtcgtctgagtg-cgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattga 203  Q
    |||||||||||||||||| |||  || ||||||||||||| || |||||||||| ||||||||| | |||| |  | ||||||| |||| ||||||||||    
T  30608646 tttgtgatttcgtcgtctaagttacgtcgttgtgttgttcgtcgtcttgtgcggcgtttgattttgcgttt-gtcgctgtgttcatttagttcctattga 30608548  T
Q  204 aatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatc 263  Q
    || ||| || | |||||||||||||||||| |||| ||||||||||||||||||||||||    
T  30608547 aagatcgacataagtcaattacaaattcaaccaatgatttgggtgtcaacgttgcagatc 30608488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 109 - 270
Target Start/End: Original strand, 3355080 - 3355241
Alignment:
Q  109 tgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaaatat 208  Q
    ||||||| |||||| ||||||  |||||||||||| |||||||||| |  ||||||||||| || ||| ||| ||||||||||| ||||||||||||  |    
T  3355080 tgatttcatcgtctaagtgcggtgttgtgttgttcgtcctcttgtgtgacgtttgatttcgcgtcttgttgtggtgttcgtttagttcctattgaaaggt 3355179  T
Q  209 caacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    | || ||||||||||| ||||||||| ||| ||||||  |||||| |||||||||| |||||    
T  3355180 cgacatcagtcaattataaattcaatgaatgatttggacgtcaactttgcagatccggaagc 3355241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 105 - 270
Target Start/End: Original strand, 34018519 - 34018684
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||||||| |||| | ||||||||||||| || ||||||| |  |||||||||| ||| |||  |  ||||||||||| |||||||||||    
T  34018519 tttgtgatttcgtcgtctaagtgtggcgttgtgttgttcgtcgtcttgtgagacgtttgatttcatgtcttgtcgcggtgttcgtttagttcctattgaa 34018618  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    | ||| |  ||||| ||||||||||||||  ||| ||||||| ||||||||||||||||| |||||    
T  34018619 agatcgagatcagttaattacaaattcaactaatgatttgggcgtcaacgttgcagatccggaagc 34018684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 105 - 262
Target Start/End: Original strand, 127629 - 127785
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||||||| |||||  ||||||||||||| || ||||||| |   |||||||||| |||| |  |  |||||| |||| |||||||||||    
T  127629 tttgtgatttcgtcgtctaagtgcagcgttgtgttgttcgtcgtcttgtgtgacatttgatttcgcgttt-gtcgcggtgttcatttagttcctattgaa 127727  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagat 262  Q
    | ||| || |||||||||||||||||| |||||| ||||||| |||||||||||||||    
T  127728 agatcgacatcagtcaattacaaattcgatcaatgatttgggcgtcaacgttgcagat 127785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 105 - 270
Target Start/End: Complemental strand, 3913705 - 3913540
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    ||||| |||||||||||| |||||| ||||||||||||| || ||||||||   ||||||||||| || |||  |  ||||| ||| | |||||||||||    
T  3913705 tttgttatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcaacgtttgatttcgcgtcttgtcgcggtgtttgttcagttcctattgaa 3913606  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    | ||| || ||| |||||||||||||||| |||| |||| |  |||||||||||||||||||||||    
T  3913605 agatctacatcaatcaattacaaattcaagcaatgatttagacgtcaacgttgcagatccagaagc 3913540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 105 - 270
Target Start/End: Complemental strand, 7515333 - 7515168
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||||||| |||||| |||| |||||||| || ||||| |||  ||||||||||| || |||  |  ||||| ||||| ||||||||| |    
T  7515333 tttgtgatttcgtcgtctaagtgcggcgttttgttgttcgtcgtcttgggcgacgtttgatttcgcgtcttgtcgcggtgtttgtttagttcctattgga 7515234  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    ||||| || ||| |||||||||||||||| |||| |||| || |||||||||||| |||| |||||    
T  7515233 atatctacatcactcaattacaaattcaaccaatgatttaggcgtcaacgttgcaaatccggaagc 7515168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 108 - 269
Target Start/End: Original strand, 14801782 - 14801950
Alignment:
Q  108 gtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcgg---tgtttgatttcgtgttttg----gtgttgtgttcgtttaattcctat 200  Q
    ||||||||||||||| |||||||| ||||||||||| || ||||||||||   |||||||||| || | ||     ||| |||||||||||  ||| |||    
T  14801782 gtgatttcgtcgtcttagtgcgacattgtgttgttcgtcgtcttgtgcggcgctgtttgattttgtatcttttattgtgctgtgttcgtttggttcgtat 14801881  T
Q  201 tgaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaag 269  Q
    ||||| || | |||||| |||| ||||||||||||||| ||||||| ||||||||||||||||||||||    
T  14801882 tgaaagattagcttcagacaatcacaaattcaatcaatgatttgggcgtcaacgttgcagatccagaag 14801950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 105 - 270
Target Start/End: Complemental strand, 29320009 - 29319844
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||| ||||||| |||||| ||||||||||||| ||||||| ||||| ||||||||||| || |||  |  ||||| ||| | ||| |||||||    
T  29320009 tttgtgattttgtcgtctaagtgcggcgttgtgttgttcgtcctcttatgcggcgtttgatttcgcgtcttgtcgcggtgtttgttaacttcatattgaa 29319910  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    | ||| || |||||||||||||||||||| |||| |||||   |||||||||||| |||| |||||    
T  29319909 agatctacatcagtcaattacaaattcaaccaatgatttgaacgtcaacgttgcaaatccggaagc 29319844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 108 - 270
Target Start/End: Original strand, 30493491 - 30493656
Alignment:
Q  108 gtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcgg---tgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||| |||||||||||||  |||||||||||| || |||||||| |   ||||||||||||| | ||| | | ||||||||||  ||| |||||||    
T  30493491 gtgatttcctcgtctgagtgcggtgttgtgttgttcgtcgtcttgtgcagcgttgtttgatttcgtatcttgttctggtgttcgtttggttcatattgaa 30493590  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    | ||||||||||||||||  || ||||||||||| ||||||  |||||||||||| |||| |||||    
T  30493591 agatcaacttcagtcaatctcatattcaatcaatgatttggacgtcaacgttgcaaatccggaagc 30493656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 105 - 264
Target Start/End: Complemental strand, 68132 - 67973
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||||||| |||| |  |||||||| |||| | |||||||||| ||||||||||| ||||||  || ||||| ||| | |||||| ||||    
T  68132 tttgtgatttcgtcgtctaagtgtggtgttgtgttattcaccgtcttgtgcggcgtttgatttcgcgttttgtcgtggtgtttgttcagttcctaatgaa 68033  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatcc 264  Q
    | ||| || |||||||||||||||||||| |||  |||||   || ||||||||||||||    
T  68032 agatctacatcagtcaattacaaattcaaccaacgatttgtacgttaacgttgcagatcc 67973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 108 - 268
Target Start/End: Original strand, 8102681 - 8102848
Alignment:
Q  108 gtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcgg---tgtttgatttcg--tgttttggtgtt--gtgttcgtttaattcctat 200  Q
    ||||||||||||||| ||||| |||||||||| ||| || ||||||||||   ||||||||||||  | ||||| |||   ||||| ||||  ||| |||    
T  8102681 gtgatttcgtcgtcttagtgcaacgttgtgtttttcgtcgtcttgtgcggcgttgtttgatttcgcatcttttgttgtgcggtgtttgtttggttcgtat 8102780  T
Q  201 tgaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaa 268  Q
    ||||| |||| |||||| |||| ||||||||| ||||| ||||||| |||||||||||||||||||||    
T  8102781 tgaaagatcagcttcagacaatcacaaattcattcaatgatttgggcgtcaacgttgcagatccagaa 8102848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 105 - 270
Target Start/End: Complemental strand, 32327348 - 32327183
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    ||||||||||| | |||| |||||| ||||||||||||| || |||||||||| ||||||||||| || |||  |  |||||  || |||| ||||||||    
T  32327348 tttgtgatttcatagtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgtcttgtcgcggtgtttattcaatttctattgaa 32327249  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    | ||| || ||| |||||||||||||||| |||| |||| |  || |||||||||||||| |||||    
T  32327248 agatctacatcaatcaattacaaattcaagcaatgattttgacgttaacgttgcagatccggaagc 32327183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 107 - 270
Target Start/End: Complemental strand, 26588604 - 26588438
Alignment:
Q  107 tgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcgg---tgtttgatttcgtgttttggtgttgtgttcgtttaattcctattga 203  Q
    ||||| ||| |||| ||||||||  ||||||||| |  || ||||||||||   |||||||||||  || ||| ||  ||||||||||  ||| ||||||    
T  26588604 tgtgaattcatcgtttgagtgcggagttgtgttgattgtcgtcttgtgcggcgttgtttgatttcccgtcttgttgcggtgttcgtttggttcatattga 26588505  T
Q  204 aatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    || |||||||||||||||| ||| ||||||| ||| |||||| ||||||||||||| ||||||||||    
T  26588504 aagatcaacttcagtcaatcacacattcaattaatgatttggatgtcaacgttgcaaatccagaagc 26588438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 182 - 270
Target Start/End: Original strand, 30894636 - 30894724
Alignment:
Q  182 gtgttcgtttaattcctattgaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    ||||||||||| ||| |||||||| ||| || |||||||||||||||||||| |||| ||||||| ||||||||| |||||||||||||    
T  30894636 gtgttcgtttagttcatattgaaagatcgacatcagtcaattacaaattcaaccaatgatttgggcgtcaacgttacagatccagaagc 30894724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 108 - 262
Target Start/End: Complemental strand, 528481 - 528324
Alignment:
Q  108 gtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcgg---tgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    ||||||||||||||  |||||||||||||||| ||  || ||||||||||   |||||||||| |||| ||| ||  ||||| ||||  ||| ||| |||    
T  528481 gtgatttcgtcgtccaagtgcgacgttgtgttatttgtcatcttgtgcggcgttgtttgattttgtgtcttgttgcagtgtttgtttcgttcttatcgaa 528382  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagat 262  Q
    | |||| ||||||| ||||||| ||| ||||||| ||||||| |||||||||||||||    
T  528381 agatcagcttcagtaaattacatatttaatcaattatttgggcgtcaacgttgcagat 528324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 108 - 270
Target Start/End: Original strand, 545985 - 546155
Alignment:
Q  108 gtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcgg---tgtttgatttcg--tgttttggtgtt--gtgttcgtttaattcctat 200  Q
    |||||||| |||||| |||||||||||| ||||||| || |||||||||    |||||||||||   | ||||| |||   ||||||||||  ||| |||    
T  545985 gtgatttcatcgtcttagtgcgacgttgcgttgttcgtcgtcttgtgcgacgttgtttgatttcacattttttgttgtgcggtgttcgtttggttcgtat 546084  T
Q  201 tgaaatatcaacttcagtcaattacaaa-ttcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    ||||| |||| |||||| |||| ||||| |||||||||| ||||||| |||||||||||||||||||||||    
T  546085 tgaaagatcagcttcagacaatcacaaaattcaatcaatgatttgggcgtcaacgttgcagatccagaagc 546155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 182 - 264
Target Start/End: Complemental strand, 29255500 - 29255418
Alignment:
Q  182 gtgttcgtttaattcctattgaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatcc 264  Q
    ||||||||||| |||||||||||| |||  | ||||||||||||||||||||||||| ||||||| ||||||||| |||||||    
T  29255500 gtgttcgtttagttcctattgaaagatcttcatcagtcaattacaaattcaatcaatgatttgggcgtcaacgttacagatcc 29255418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 109 - 244
Target Start/End: Complemental strand, 11321596 - 11321461
Alignment:
Q  109 tgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaaatat 208  Q
    |||||||||||||| ||||||  |||||||||||| |  || ||   |  ||||||||||  || ||| ||| ||||||||||| |||||||||||| ||    
T  11321596 tgatttcgtcgtcttagtgcggtgttgtgttgttcgtggtcctgcatgacgtttgatttcacgtcttgttgtggtgttcgtttagttcctattgaaagat 11321497  T
Q  209 caacttcagtcaattacaaattcaatcaataatttg 244  Q
    | || ||||||||||||||||||||||||| |||||    
T  11321496 cgacatcagtcaattacaaattcaatcaattatttg 11321461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 108 - 270
Target Start/End: Original strand, 1523363 - 1523532
Alignment:
Q  108 gtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcg---gtgtttgatttc----gtgttttggtgttgtgttcgtttaattcctat 200  Q
    ||||||||||||||| |||||||||||||||||||| || |||||||||    |||||||||||     | || | |||  ||||||||||  ||| |||    
T  1523363 gtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtcttgtgcgacattgtttgatttcacatattttattgtgcggtgttcgtttggttcgtat 1523462  T
Q  201 tgaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    |||||||||| ||| || ||||  ||| |||||||||| |||||   |||||||||||||||||||||||    
T  1523463 tgaaatatcagcttgagacaatctcaacttcaatcaatgatttgaacgtcaacgttgcagatccagaagc 1523532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 152 - 270
Target Start/End: Original strand, 12170474 - 12170592
Alignment:
Q  152 gtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtca 251  Q
    |||||| ||||||||||| || |||  |  ||||| ||| | |||||||||||| ||| || ||| |||||||||||||||| |||| |||||| |||||    
T  12170474 gtgcggcgtttgatttcgcgtcttgtcgcggtgtttgttcagttcctattgaaagatctacatcaatcaattacaaattcaagcaatgatttggatgtca 12170573  T
Q  252 acgttgcagatccagaagc 270  Q
    ||||||||||||| |||||    
T  12170574 acgttgcagatccggaagc 12170592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 182 - 270
Target Start/End: Complemental strand, 24227786 - 24227698
Alignment:
Q  182 gtgttcgtttaattcctattgaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    |||||| |||||||| |||||||||||| ||||||||||||||||| |||||||||| |||||    |||||||| ||||||| |||||    
T  24227786 gtgttcatttaattcatattgaaatatcgacttcagtcaattacaatttcaatcaatgatttgaacctcaacgttccagatcctgaagc 24227698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 108 - 252
Target Start/End: Complemental strand, 31575638 - 31575491
Alignment:
Q  108 gtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcgg---tgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    ||||||||||| ||||| ||||  ||| ||||||||||| || ||||||    |||||||||||  || ||| ||   ||||||| | ||||||||||||    
T  31575638 gtgatttcgtcatctgaatgcggtgttatgttgttcatcgtcatgtgcgacgttgtttgatttctcgtcttgttgcgatgttcgtctgattcctattgaa 31575539  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaa 252  Q
    | ||| | |||| |||||||||||||||||| |||||||| |||||||    
T  31575538 aaatcgatttcactcaattacaaattcaatcgataatttgagtgtcaa 31575491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 105 - 169
Target Start/End: Original strand, 32059868 - 32059932
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcg 169  Q
    ||||||||||| |||||| |||| ||||||||||||||| || |||||||||| |||||||||||    
T  32059868 tttgtgatttcttcgtctaagtgtgacgttgtgttgttcgtcgtcttgtgcggcgtttgatttcg 32059932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 105 - 248
Target Start/End: Complemental strand, 13546794 - 13546652
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    ||||| |||||||||| |||||||| ||||||||||||| || |||| ||||| ||||||||| | |  ||| ||| ||||||||||   || | |||||    
T  13546794 tttgtaatttcgtcgtttgagtgcggcgttgtgttgttcgtcgtcttatgcggcgtttgattttgcgccttgttgtagtgttcgtttggatcattttgaa 13546695  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtg 248  Q
    | |||||||||| | ||||||| | ||||||||| |||| ||||    
T  13546694 agatcaacttca-ttaattacagactcaatcaatgatttaggtg 13546652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 105 - 152
Target Start/End: Complemental strand, 31852319 - 31852272
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttg 152  Q
    ||||||||||||||||||||||||||||||||||||||| || |||||    
T  31852319 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcgtcgtcttg 31852272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 108 - 157
Target Start/End: Original strand, 30776627 - 30776676
Alignment:
Q  108 gtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcgg 157  Q
    ||||||||||||||| |||||||||||||||||||| || ||||||||||    
T  30776627 gtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcatcttgtgcgg 30776676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 263
Target Start/End: Original strand, 33184757 - 33184842
Alignment:
Q  178 tgttgtgttcgtttaattcctattgaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatc 263  Q
    |||||||||||||| | || |||| ||| |||||||||| ||||||||| ||| ||||||  | ||| ||||||||||||||||||    
T  33184757 tgttgtgttcgtttgaatcatattaaaaaatcaacttcaatcaattacatattaaatcaaagaattgagtgtcaacgttgcagatc 33184842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 183 - 270
Target Start/End: Complemental strand, 4010564 - 4010478
Alignment:
Q  183 tgttcgtttaattcctattgaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    |||| |||| ||||||||||||| ||||  | || ||||||||| ||||||||||| ||||||||||  ||||||||||||| |||||    
T  4010564 tgtttgtttgattcctattgaaagatcatat-caatcaattacatattcaatcaatgatttgggtgttgacgttgcagatccggaagc 4010478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 120 - 245
Target Start/End: Original strand, 22571445 - 22571574
Alignment:
Q  120 tctgagtgcgacgttgtgttgttcatcctcttgtgcgg---tgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaaata-tcaacttc 215  Q
    ||||||| ||| |||||||||||| || ||||||||||   |||||||||| | |||||| | | ||||||||||  ||  |||||||| | ||| ||||    
T  22571445 tctgagtacgatgttgtgttgttcgtcgtcttgtgcggcgttgtttgattttgcgttttgttatggtgttcgtttggttaatattgaaaaaatcagcttc 22571544  T
Q  216 agtcaattacaaattcaatcaataatttgg 245  Q
    |||| ||||||||||||| |||| ||||||    
T  22571545 agtcgattacaaattcaaccaatgatttgg 22571574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 105 - 259
Target Start/End: Complemental strand, 34185827 - 34185670
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtg---cggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctatt 201  Q
    ||||||||||| |||| |||||||| | ||||| ||||  || |||||||   || |||||||||| | || ||| ||| |||||| |||| ||| ||||    
T  34185827 tttgtgatttcatcgtttgagtgcggcattgtgctgtttgtcgtcttgtgtgacgttgtttgattttgcgtcttgttgtggtgttcttttagttcatatt 34185728  T
Q  202 gaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgca 259  Q
    |||| |||||||||||   || || |||||||||||| ||||||  |||||| |||||    
T  34185727 gaaagatcaacttcaggtgatcacgaattcaatcaatgatttggacgtcaactttgca 34185670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 264
Target Start/End: Complemental strand, 1933824 - 1933664
Alignment:
Q  108 gtgatttcgtcgtctgagtgcga-cgttgtgttgttcatcctcttgtgcgg---tgtttgatttcgtgttttggtgttgtgttcgtttaattcctattga 203  Q
    |||||||||||||||||| | |  |||||||||| |  || ||||||||||   |||||||||| |||| | | ||  ||||| ||||  ||| |||  |    
T  1933824 gtgatttcgtcgtctgagagtgggcgttgtgttgctagtcgtcttgtgcggcattgtttgattttgtgtctggttgcggtgtttgtttggttcatatcaa 1933725  T
Q  204 aatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatcc 264  Q
    || |||||||||| ||||| ||| ||||||||||| ||||||  |||||||||||||||||    
T  1933724 aagatcaacttcaatcaatcacagattcaatcaatgatttggacgtcaacgttgcagatcc 1933664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 162
Target Start/End: Complemental strand, 7976308 - 7976254
Alignment:
Q  108 gtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgttt 162  Q
    ||||||||||||||||||||||  |||||||||||| || |||||||||| ||||    
T  7976308 gtgatttcgtcgtctgagtgcgttgttgtgttgttcgtcgtcttgtgcggcgttt 7976254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 270
Target Start/End: Original strand, 31296793 - 31296944
Alignment:
Q  122 tgagtgcgacgttgtgttgttcatcctcttgtgcgg---tgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaaatatcaacttcagt 218  Q
    |||||||| |||||||||||||||| ||||||||||   |||||||||| |  | ||| ||  |||||| ||| |||| |||||||| ||||  ||||||    
T  31296793 tgagtgcggcgttgtgttgttcatcatcttgtgcggcgttgtttgattttgcatcttgttgcagtgttcatttgattcatattgaaaaatcagtttcagt 31296892  T
Q  219 caattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    ||||   | |||||||  || |||| |  ||||||||||||||||| |||||    
T  31296893 caatccaatattcaattgatgatttagacgtcaacgttgcagatccggaagc 31296944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 73
Target Start/End: Original strand, 20220794 - 20220842
Alignment:
Q  25 tgcatctttttcccctttcttttaatttaaattagtggatttcacacat 73  Q
    ||||||||||||||||||||||  |||||||| ||||| ||||||||||    
T  20220794 tgcatctttttcccctttctttcgatttaaataagtggctttcacacat 20220842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 73
Target Start/End: Original strand, 22114778 - 22114826
Alignment:
Q  25 tgcatctttttcccctttcttttaatttaaattagtggatttcacacat 73  Q
    ||||||||||||||||||||||  |||||||| ||||| ||||||||||    
T  22114778 tgcatctttttcccctttctttcgatttaaataagtggctttcacacat 22114826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 264
Target Start/End: Original strand, 28981133 - 28981295
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcgg---tgtttgatttcgtgttttggtgttgtgttcgtttaattcctatt 201  Q
    ||||||||||  |||||||||| || ||||||||||||| || |||| |||||   |||||||||| || | ||| ||| ||||||||||  ||| ||||    
T  28981133 tttgtgattttatcgtctgagtacggcgttgtgttgttcgtcgtcttctgcggtgttgtttgattttgtatcttgttgtggtgttcgtttggttcatatt 28981232  T
Q  202 gaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatcc 264  Q
     ||| || |  || ||||||| ||| ||||||||||| || | |  |||||| ||||||||||    
T  28981233 caaagattagttttagtcaatcacagattcaatcaatgatcttgacgtcaacattgcagatcc 28981295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 105 - 259
Target Start/End: Original strand, 25092434 - 25092591
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtt---tgatttcgtgttttggtgttgtgttcgtttaattcctatt 201  Q
    |||||||||||||| |||||||| | |||||||||||||| | |||||||  |||||   | ||||  ||||||| |   |||||| |||  || |||||    
T  25092434 tttgtgatttcgtcatctgagtgtggcgttgtgttgttcagcgtcttgtgtagtgttgcttaatttactgttttgtttcggtgttcatttggtttctatt 25092533  T
Q  202 gaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgca 259  Q
     ||| |  |  |||||||||||||||||||||||||| || ||  |||||||||||||    
T  25092534 aaaagacaatattcagtcaattacaaattcaatcaatgatatgtttgtcaacgttgca 25092591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 262
Target Start/End: Original strand, 6957116 - 6957266
Alignment:
Q  112 tttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaaatatcaa 211  Q
    ||||||||||||| || |  |||||||||||| || | || || ||||||| |||||  || ||| ||  |||||| ||| ||| | ||||| | ||| |    
T  6957116 tttcgtcgtctgattgtggtgttgtgttgttcgtcgttttatgtggtgtttcatttcacgtcttgttgcagtgttcatttgatttccattgatagatcga 6957215  T
Q  212 cttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagat 262  Q
    ||||||||||| ||| ||||||||||| |||| ||  ||||||||| ||||    
T  6957216 cttcagtcaataacagattcaatcaatgatttaggcatcaacgttgtagat 6957266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 228 - 270
Target Start/End: Complemental strand, 33543612 - 33543570
Alignment:
Q  228 attcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    |||||||||| |||||||||||||| ||||||||||| |||||    
T  33543612 attcaatcaaaaatttgggtgtcaatgttgcagatccggaagc 33543570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 120 - 169
Target Start/End: Original strand, 20220852 - 20220901
Alignment:
Q  120 tctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcg 169  Q
    |||||||||| |||| |||||||| || |||||||||| |||||||||||    
T  20220852 tctgagtgcggcgttttgttgttcgtcgtcttgtgcggcgtttgatttcg 20220901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 197 - 262
Target Start/End: Original strand, 20225902 - 20225967
Alignment:
Q  197 ctattgaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagat 262  Q
    |||||| || |||||||||| ||| ||||||||||||||||| |||| || | | |||||||||||    
T  20225902 ctattggaagatcaacttcattcagttacaaattcaatcaatgattttggcgccgacgttgcagat 20225967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 120 - 169
Target Start/End: Original strand, 22114836 - 22114885
Alignment:
Q  120 tctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcg 169  Q
    |||||||||| |||| |||||||| || |||||||||| |||||||||||    
T  22114836 tctgagtgcggcgttttgttgttcgtcgtcttgtgcggcgtttgatttcg 22114885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 197 - 262
Target Start/End: Original strand, 22119886 - 22119951
Alignment:
Q  197 ctattgaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagat 262  Q
    |||||| || |||||||||| ||| ||||||||||||||||| |||| || | | |||||||||||    
T  22119886 ctattggaagatcaacttcattcagttacaaattcaatcaatgattttggcgccgacgttgcagat 22119951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 228 - 264
Target Start/End: Complemental strand, 17237276 - 17237240
Alignment:
Q  228 attcaatcaataatttgggtgtcaacgttgcagatcc 264  Q
    ||||||||||  |||||||||||||||||||||||||    
T  17237276 attcaatcaaagatttgggtgtcaacgttgcagatcc 17237240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 198 - 270
Target Start/End: Complemental strand, 31852231 - 31852159
Alignment:
Q  198 tattgaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    |||||||| |||||||||||||||  ||| ||| ||||||| |||||   ||||| ||||||||||| |||||    
T  31852231 tattgaaagatcaacttcagtcaaccacagattaaatcaatgatttgaacgtcaaagttgcagatccggaagc 31852159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 78; Significance: 2e-36; HSPs: 66)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 105 - 270
Target Start/End: Original strand, 22611161 - 22611326
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||||||| |||||| ||||||||||||| || |||||||||| ||||||||| | ||||||  |  ||||| ||| | |||||||||||    
T  22611161 tttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgattttgcgttttgtcgcggtgtttgttcagttcctattgaa 22611260  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    | ||| || |||||||||||||||||||| |||| ||||||  ||||||||||||||||| |||||    
T  22611261 agatctacatcagtcaattacaaattcaaccaatgatttggacgtcaacgttgcagatccggaagc 22611326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 105 - 270
Target Start/End: Original strand, 35348285 - 35348450
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||||||| |||||| ||||||||||||| || |||||||||| |||||||||||| | ||| ||| ||||||||||| || ||||||||    
T  35348285 tttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgtttcttgttgtggtgttcgtttagttactattgaa 35348384  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    | |||  |   |||||||||||||||||| |||| || ||| |||||||||||||||||| |||||    
T  35348385 agatcggcgatagtcaattacaaattcaaccaatgatctggatgtcaacgttgcagatccggaagc 35348450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 105 - 270
Target Start/End: Original strand, 53444096 - 53444261
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||||||| ||| |||||||||||||||| || ||||||||||| |||||||||| ||||||  |  ||||| ||||| |||||||||||    
T  53444096 tttgtgatttcgtcgtctaagtacgacgttgtgttgttcgtcgtcttgtgcggtatttgatttcgcgttttgtcgcggtgtttgtttatttcctattgaa 53444195  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    | |||  | |||||||||||||||||||| |||| ||||||| ||||| |||| |||||| |||||    
T  53444196 agatcggcatcagtcaattacaaattcaaccaatgatttgggcgtcaatgttgaagatccggaagc 53444261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 105 - 268
Target Start/End: Complemental strand, 4142886 - 4142720
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtg---tttgatttcgtgttttggtgttgtgttcgtttaattcctatt 201  Q
    |||||||||||||||||| |||||| ||||||||||||| || |||||||||| |   |||||||||||||||||  |  ||||| ||| ||||||| ||    
T  4142886 tttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcggcgtttgatttcgtgttttgtcgcggtgtttgttcaattcctctt 4142787  T
Q  202 gaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaa 268  Q
    |||| ||| || |||||||||||||||||||| |||| ||||||  |||||||||||||||||||||    
T  4142786 gaaagatctacatcagtcaattacaaattcaaccaatgatttggacgtcaacgttgcagatccagaa 4142720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 105 - 269
Target Start/End: Complemental strand, 17949455 - 17949291
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||||||| |||||| ||||||||||||  || | |||||||| ||||||||| | ||||||  |  |||||||||||||||||||||||    
T  17949455 tttgtgatttcgtcgtctaagtgcggcgttgtgttgtttgtcgtgttgtgcggcgtttgattttgcgttttgtcgcggtgttcgtttaattcctattgaa 17949356  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaag 269  Q
    | ||| || |||||||||||||||||||| |||| ||| | | ||||||||||||||||| ||||    
T  17949355 agatctacatcagtcaattacaaattcaaccaatgattggagcgtcaacgttgcagatccggaag 17949291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 105 - 269
Target Start/End: Complemental strand, 17953307 - 17953143
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||||||| |||||| ||||||||||||  || | |||||||| ||||||||| | ||||||  |  |||||||||||||||||||||||    
T  17953307 tttgtgatttcgtcgtctaagtgcggcgttgtgttgtttgtcgtgttgtgcggcgtttgattttgcgttttgtcgcggtgttcgtttaattcctattgaa 17953208  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaag 269  Q
    | ||| || |||||||||||||||||||| |||| ||| | | ||||||||||||||||| ||||    
T  17953207 agatctacatcagtcaattacaaattcaaccaatgattggagcgtcaacgttgcagatccggaag 17953143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 105 - 264
Target Start/End: Original strand, 54021838 - 54021997
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    ||||||||||||| |||| | |||| | ||||||||||  || |||||||||| |||||||||||||| |||  |  ||||||||||| |||||||||||    
T  54021838 tttgtgatttcgttgtctaattgcggcattgtgttgttagtcgtcttgtgcggcgtttgatttcgtgtcttgtcgcggtgttcgtttagttcctattgaa 54021937  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatcc 264  Q
    | ||| || ||||||||||||||||| ||||||| |||||| ||||||||||||||||||    
T  54021938 agatcgacatcagtcaattacaaattgaatcaatgatttggatgtcaacgttgcagatcc 54021997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 105 - 264
Target Start/End: Original strand, 32766492 - 32766651
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||||||| ||||||  |||||||||||| || |||||||||| ||||||||||| ||||||  |  ||||| ||| | |||||||| ||    
T  32766492 tttgtgatttcgtcgtctaagtgcggtgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgttttgtcgcggtgtttgttcagttcctattaaa 32766591  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatcc 264  Q
    | ||| || ||||||||||||||||||||||||| ||||||  ||||| |||||||||||    
T  32766592 agatctacatcagtcaattacaaattcaatcaatgatttggacgtcaatgttgcagatcc 32766651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 25 - 262
Target Start/End: Complemental strand, 12199896 - 12199667
Alignment:
Q  25 tgcatctttttcccctttcttttaatttaaattagtggatttcacacatatcaaattttacattttgtgcnnnnnnnnngtttgtgatttcgtcgtctga 124  Q
    |||||||||||||||||||||| |||||| ||  |||| ||||||||||| ||| ||||  ||||||||           ||||||||||||||||||||    
T  12199896 tgcatctttttcccctttctttcaatttacatatgtggttttcacacatagcaagttttctattttgtgttt--------tttgtgatttcgtcgtctga 12199805  T
Q  125 gtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaaatatcaacttcagtcaatta 224  Q
    ||| | |||||||||||||||| | |||||| |  |||||||| | || ||| ||  ||||||||||| ||| ||||||||||||||||||||||| |||    
T  12199804 gtgtggcgttgtgttgttcatcgttttgtgcagcttttgattttgcgtcttgttgcggtgttcgtttagttcatattgaaatatcaacttcagtcagtta 12199705  T
Q  225 caaattcaatcaataatttgggtgtcaacgttgcagat 262  Q
    || ||||||||||  ||||| | ||| ||||| |||||    
T  12199704 cagattcaatcaaagatttgagcgtcgacgttacagat 12199667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 105 - 264
Target Start/End: Original strand, 8670463 - 8670622
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||| ||||| | |||||| ||||||||||||  || |||||||||||||||||||||| |  |||  |  ||||||||||| |||||||||||    
T  8670463 tttgtgattttgtcgtgtaagtgcggcgttgtgttgttagtcatcttgtgcggtgtttgatttcgcgacttgtcgcggtgttcgtttatttcctattgaa 8670562  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatcc 264  Q
    | |||  | |||||||||||||||||||| |||| ||||||| |||||||||| ||||||    
T  8670563 agatcggcatcagtcaattacaaattcaaccaatgatttgggcgtcaacgttgaagatcc 8670622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 105 - 263
Target Start/End: Complemental strand, 56156773 - 56156615
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||||||| |||| | ||||||||||||| || ||||||| || ||||||||||| || |||  |  ||||||||||| ||||| |||||    
T  56156773 tttgtgatttcgtcgtctaagtgtggcgttgtgttgttcgtcgtcttgtgtggcgtttgatttcgcgtcttgtcgcggtgttcgtttagttcctcttgaa 56156674  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatc 263  Q
    | || ||| |||||||||||||||||||| |||| ||| ||| |||||| |||||||||    
T  56156673 agattaacatcagtcaattacaaattcaaccaatgattggggcgtcaacattgcagatc 56156615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 105 - 270
Target Start/End: Complemental strand, 56040777 - 56040612
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||||| | |||||| |||| |||||||| || |||||||||| |||| |||| | || |||  |  ||||| ||||| ||||||||| |    
T  56040777 tttgtgatttcgtcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcggcgtttaattttgcgtcttgtcgcagtgtttgtttagttcctattgga 56040678  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    | ||| || |||||||||||||||||||| |||| ||||||| | |||||||||||||||||||||    
T  56040677 agatctacatcagtcaattacaaattcaaccaatgatttgggcggcaacgttgcagatccagaagc 56040612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 105 - 263
Target Start/End: Original strand, 9178331 - 9178489
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    ||||||||||| || ||| ||||||||||||| |||||| || ||||||| || ||||||||||| || |||  |   |||||||||| |||||||||||    
T  9178331 tttgtgatttcatcatctaagtgcgacgttgtattgttcgtcatcttgtgtggcgtttgatttcgcgtcttgtcgcgttgttcgtttagttcctattgaa 9178430  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatc 263  Q
    | ||| || ||| |||||||||||| |||||||||||||| |  |||||||||||||||    
T  9178431 agatcgacatcaatcaattacaaatccaatcaataatttgagcatcaacgttgcagatc 9178489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 105 - 270
Target Start/End: Complemental strand, 21686372 - 21686208
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||||||| |||||| ||| ||||||||| || |||||||||| ||||||||||| || |||  |  ||||| ||| | |||||||||||    
T  21686372 tttgtgatttcgtcgtctaagtgcggcgt-gtgttgttcgtcgtcttgtgcggcgtttgatttcgcgtcttgccgcggtgtttgttcagttcctattgaa 21686274  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    | ||| || ||| ||| |||||||||||| |||| ||||||  ||||||||||||||||| |||||    
T  21686273 agatctacatcaatcagttacaaattcaagcaatgatttggacgtcaacgttgcagatccggaagc 21686208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 108 - 270
Target Start/End: Original strand, 27651918 - 27652087
Alignment:
Q  108 gtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtt---tgatttcgtgt--tttggtgtt--gtgttcgtttaattcctat 200  Q
    ||||||||||||||| ||||| |||||||||||||| || ||||||||||||||   ||||||||  |  |||| |||   ||||||||||  ||| |||    
T  27651918 gtgatttcgtcgtcttagtgcaacgttgtgttgttcgtcgtcttgtgcggtgttgtttgatttcgcatcctttgttgtgcggtgttcgtttggttcgtat 27652017  T
Q  201 tgaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    ||||| |||| ||| || |||| ||||||||||||||| |||||||| ||||||||||||||||||||||    
T  27652018 tgaaagatcagctttagacaatcacaaattcaatcaatgatttgggtatcaacgttgcagatccagaagc 27652087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 109 - 246
Target Start/End: Complemental strand, 52061050 - 52060913
Alignment:
Q  109 tgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaaatat 208  Q
    ||||||| |||||| |||| | | ||||| ||||| || |||||| ||| ||||||||  |||| ||| ||  |||||||||||||||||||||||| ||    
T  52061050 tgatttcatcgtctaagtgtggcattgtgatgttcgtcgtcttgtacggcgtttgattatgtgtcttgttgaggtgttcgtttaattcctattgaaagat 52060951  T
Q  209 caacttcagtcaattacaaattcaatcaataatttggg 246  Q
    |||||||||||||||||| ||||||||||| |||||||    
T  52060950 caacttcagtcaattacagattcaatcaatgatttggg 52060913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 105 - 270
Target Start/End: Original strand, 53811006 - 53811171
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    ||||| |||||||| ||| | |||| |||| |||||||| || |||||||||| ||||||||||| ||||||  |  | ||| ||| | |||||||||||    
T  53811006 tttgtcatttcgtcatctaaatgcggcgttttgttgttcgtcgtcttgtgcggcgtttgatttcgcgttttgtcgcggggtttgttcagttcctattgaa 53811105  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    | ||| || |||||||||||||||||||| |||| ||||||  ||||||||||||||||| |||||    
T  53811106 agatctacatcagtcaattacaaattcaaccaatgatttggacgtcaacgttgcagatccggaagc 53811171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 105 - 270
Target Start/End: Original strand, 2520755 - 2520922
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgt--tgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattg 202  Q
    |||||||||||||||||| ||||||  |||||||  ||||| || |||||||||| ||||||||||| ||||||  |   |||| ||| |||||||||||    
T  2520755 tttgtgatttcgtcgtctaagtgcggtgttgtgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgttttgtcgcgatgtttgttcaattcctattg 2520854  T
Q  203 aaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    ||| ||| || ||| ||||||||||||| || |||| ||||||  ||||||||||||||||| |||||    
T  2520855 aaagatctacatcaatcaattacaaattaaagcaatgatttggacgtcaacgttgcagatccggaagc 2520922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 105 - 264
Target Start/End: Original strand, 13634093 - 13634252
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||||||| |||||| ||||||||||||| || |||||||||  ||| ||||||| || |||  |  ||||| ||| | |||||||||||    
T  13634093 tttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcgaggttagatttcgcgtcttgtcgcggtgtttgttcagttcctattgaa 13634192  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatcc 264  Q
    | ||| || ||| |||||||||||||||| |||  ||||||  |||||||||||||||||    
T  13634193 agatctacatcaatcaattacaaattcaagcaacgatttggacgtcaacgttgcagatcc 13634252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 105 - 270
Target Start/End: Complemental strand, 26633802 - 26633637
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||||||| |||||| ||||||||||||| || ||||||||||  || || |||| || |||  |  ||||| ||| | |||||||||||    
T  26633802 tttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcattggacttcgcgtcttgtcgcagtgtttgttcagttcctattgaa 26633703  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    | ||| || |||||| ||||||||||||| |||| ||||||  ||||| ||||||||||| |||||    
T  26633702 agatctacatcagtcgattacaaattcaaccaatgatttggacgtcaatgttgcagatccggaagc 26633637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 105 - 270
Target Start/End: Original strand, 43510175 - 43510339
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||||||| |||||| ||||||||| ||  || |||||||||| ||||||||||||||||||  |  ||||| ||| ||||||| |||||    
T  43510175 tttgtgatttcgtcgtctaagtgcggcgttgtgttatttgtcgtcttgtgcggcgtttgatttcgtgttttgtcgcggtgtttgttcaattcctcttgaa 43510274  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    | ||| || |||||| |||||||||| ||  ||| ||||||  ||||| ||||||||||| |||||    
T  43510275 agatctacatcagtc-attacaaattaaactaatgatttggacgtcaatgttgcagatcctgaagc 43510339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 105 - 270
Target Start/End: Original strand, 33921029 - 33921197
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||||||| |||||| |||||||||||||  | |||| ||||  ||||||||||  || |||  |  ||||||||||| |||||||||||    
T  33921029 tttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgccgtcttatgcgacgtttgatttcacgtcttgtcgcagtgttcgtttagttcctattgaa 33921128  T
Q  205 atatcaacttcagtcaattacaa----attcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    | ||| || || |||||||||||    ||||||||||||||||| | ||||||||||||||||| |||||    
T  33921129 agatcgacatc-gtcaattacaaacaaattcaatcaataatttgagcgtcaacgttgcagatccggaagc 33921197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 108 - 270
Target Start/End: Original strand, 52944289 - 52944454
Alignment:
Q  108 gtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcgg---tgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||| ||||||||||| ||||||||||||| || | ||||||||   ||||| |||| | || ||| ||  ||||||||||  ||| |||||||    
T  52944289 gtgatttcgtagtctgagtgcggcgttgtgttgttcgtcgttttgtgcggcgttgtttaattttgcgtcttgttgcggtgttcgtttgtttcatattgaa 52944388  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    | |||| ||||||||||| ||| |||||||| || ||||||  ||||||||||||||||| |||||    
T  52944389 agatcagcttcagtcaatcacagattcaatcgatgatttggacgtcaacgttgcagatccggaagc 52944454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 105 - 270
Target Start/End: Complemental strand, 19853643 - 19853478
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||||||| |||||| ||||||||||||| || |||| || ||  |||||||| | |||||      ||||| ||| | |||||||||||    
T  19853643 tttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttatgtggcatttgattttgcgttttatcacggtgtttgttcagttcctattgaa 19853544  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    | ||| || ||| |||||||||||||||| |||| ||||||  ||||||||||||||||| |||||    
T  19853543 agatctacatcactcaattacaaattcaaccaatgatttggacgtcaacgttgcagatccggaagc 19853478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 185 - 270
Target Start/End: Original strand, 21662495 - 21662580
Alignment:
Q  185 ttcgtttaattcctattgaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    |||||||| |||||||||||| |||||| |||||||||||||||| |||||||| ||||| | ||||||||||||||||| |||||    
T  21662495 ttcgtttagttcctattgaaagatcaacatcagtcaattacaaatccaatcaatgatttgagcgtcaacgttgcagatccggaagc 21662580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 185 - 270
Target Start/End: Original strand, 21671259 - 21671344
Alignment:
Q  185 ttcgtttaattcctattgaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    |||||||| |||||||||||| |||||| |||||||||||||||| |||||||| ||||| | ||||||||||||||||| |||||    
T  21671259 ttcgtttagttcctattgaaagatcaacatcagtcaattacaaatccaatcaatgatttgagcgtcaacgttgcagatccggaagc 21671344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 112 - 264
Target Start/End: Original strand, 10496320 - 10496472
Alignment:
Q  112 tttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaaatatcaa 211  Q
    ||||||||| | |||||| || |||||||||| || ||||||| |  ||||||||| | || |||  |  ||||||||||| |||||||||||| |||      
T  10496320 tttcgtcgtgtaagtgcggcgatgtgttgttcgtcgtcttgtgtgacgtttgattttgcgtcttgtcgcagtgttcgtttagttcctattgaaagatcgg 10496419  T
Q  212 cttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatcc 264  Q
    | |||||||||||||||||||| |||| ||||||| |||||| ||||||||||    
T  10496420 catcagtcaattacaaattcaaccaatgatttgggcgtcaactttgcagatcc 10496472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 108 - 259
Target Start/End: Complemental strand, 51888342 - 51888188
Alignment:
Q  108 gtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtg---cggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||| ||||||||||| |||||||||||||||| |||| ||   || ||||||||||||  | ||| ||  ||||||||||  ||| |||||||    
T  51888342 gtgatttcgttgtctgagtgcggcgttgtgttgttcatcgtcttatgcgacgttgtttgatttcgcatcttgttgcggtgttcgtttggttcatattgaa 51888243  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgca 259  Q
    | |||||||||| ||||| ||||||| ||||||| |||| | ||| |||||||||    
T  51888242 agatcaacttcaatcaatcacaaatttaatcaatgattttgatgttaacgttgca 51888188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 109 - 264
Target Start/End: Complemental strand, 24099194 - 24099039
Alignment:
Q  109 tgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaaatat 208  Q
    |||||||||||||| |||||| | || |||||||| || |||||||||| | ||||||||| || |||  |  | ||| ||| | |||||||||||| ||    
T  24099194 tgatttcgtcgtctaagtgcggcattttgttgttcgtcgtcttgtgcggcgattgatttcgcgtcttgtcgcggagtttgttcagttcctattgaaagat 24099095  T
Q  209 caacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatcc 264  Q
    | || ||| |||||||||||||||| |||| ||||||  |||||||||||||||||    
T  24099094 ctacatcaatcaattacaaattcaagcaatgatttggacgtcaacgttgcagatcc 24099039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 108 - 270
Target Start/End: Complemental strand, 31891422 - 31891253
Alignment:
Q  108 gtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtg---cggtgtttgatttcgt----gttttggtgttgtgttcgtttaattcctat 200  Q
    ||||||||||||||| |||||||||||||||||||| || |||||||   || ||||||||||||     ||| | |||  ||||||||||  ||| |||    
T  31891422 gtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtcttgtgtagcgttgtttgatttcgcatccgttgttgtgcggtgttcgtttggttcgtat 31891323  T
Q  201 tgaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    ||||| ||||  ||||| |||| |||||||||| | || ||||||| |||||||||||| ||||||||||    
T  31891322 tgaaaaatcagtttcagacaatcacaaattcaaaccatgatttgggcgtcaacgttgcaaatccagaagc 31891253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 124 - 269
Target Start/End: Complemental strand, 1621620 - 1621472
Alignment:
Q  124 agtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgt--tttg--gtgttgtgttcgtttaattcctattgaaatatcaacttcagtc 219  Q
    |||||||||||||||||| | || ||||||||| ||||||||||||  |  ||||  |||| ||||||||||  ||| |||||||| |||| |||||  |    
T  1621620 agtgcgacgttgtgttgtccgtcgtcttgtgcgttgtttgatttcgcatcctttgttgtgtggtgttcgtttggttcgtattgaaagatcagcttcaaac 1621521  T
Q  220 aattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaag 269  Q
    ||| | ||||||||||||| ||||||| || |||||||||||||||||||    
T  1621520 aatcataaattcaatcaatgatttgggcgt-aacgttgcagatccagaag 1621472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 108 - 270
Target Start/End: Complemental strand, 6155356 - 6155192
Alignment:
Q  108 gtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcgg---tgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    ||||||||||||||||||||||  |||||||||| | || |||||||||    |||||||||||||||||||  |  |||||||||| |||| |||||||    
T  6155356 gtgatttcgtcgtctgagtgcggtgttgtgttgt-cgtcatcttgtgcgtcgttgtttgatttcgtgttttgtcgcagtgttcgtttgattcatattgaa 6155258  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    | ||||  |||||||||| |||  ||||||| || |||| |  || |||||||||||||| |||||    
T  6155257 agatcagtttcagtcaatcacatgttcaatcgatgatttagacgtaaacgttgcagatccggaagc 6155192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 108 - 264
Target Start/End: Original strand, 22300827 - 22300986
Alignment:
Q  108 gtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcgg---tgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||||| ||||||||||||||||||| || ||||||||||   |||||||||||| ||  || ||  ||||| |||||  || | |||||    
T  22300827 gtgatttcgtcgtctgtgtgcgacgttgtgttgttcgtcgtcttgtgcggcgttgtttgatttcgcgtcctgttgcggtgtttgtttagctcatcttgaa 22300926  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatcc 264  Q
    | |||| ||| ||||||| ||| |||||||| || ||||||  | | |||||||||||||    
T  22300927 agatcagctttagtcaatcacagattcaatcgatgatttggacgccgacgttgcagatcc 22300986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 108 - 265
Target Start/End: Complemental strand, 33332702 - 33332540
Alignment:
Q  108 gtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcgg---tgtttgatttcgtgttttggtgtt--gtgttcgtttaattcctattg 202  Q
    |||||||||||||||| ||||| ||||||||||||  ||  ||||||||    ||||||||||||  | ||| |||   ||||||||||  ||  |||||    
T  33332702 gtgatttcgtcgtctgtgtgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgtttttattg 33332603  T
Q  203 aaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatcca 265  Q
    ||| ||||||||||| |||| ||| ||||||||||| ||||||  ||||||||||||||||||    
T  33332602 aaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatcca 33332540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 105 - 270
Target Start/End: Original strand, 28857377 - 28857545
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcgg---tgtttgatttcgtgttttggtgttgtgttcgtttaattcctatt 201  Q
    ||||||||||| |||||| |||||| ||||||||||||| |  ||||||||||   ||||||||| || || | | ||  ||||||||||  ||| ||||    
T  28857377 tttgtgatttcatcgtctaagtgcggcgttgtgttgttcgttgtcttgtgcggcgttgtttgattccgcgtctagttgcggtgttcgtttgtttcatatt 28857476  T
Q  202 gaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    |||| |||| ||||||||||| ||| |||||||  || ||||||  | ||||||| ||||||| |||||    
T  28857477 gaaagatcagcttcagtcaatcacatattcaattgatgatttggacgccaacgtttcagatccggaagc 28857545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 105 - 263
Target Start/End: Original strand, 37030239 - 37030397
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||| ||||||| || ||||||||||||| || ||||||  || |||||||||| ||| |||  |  |||| |||||  || ||||  ||    
T  37030239 tttgtgatttcgtcatctgagtacggcgttgtgttgttcgtcgtcttgtatggcgtttgatttcatgtcttgtcgcggtgtacgtttggtttctatcaaa 37030338  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatc 263  Q
    | |||||||||| |||| |||| ||||||||||| ||||||   || ||||||||||||    
T  37030339 agatcaacttcaatcaaatacagattcaatcaatgatttggacatcgacgttgcagatc 37030397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 108 - 269
Target Start/End: Complemental strand, 36204516 - 36204346
Alignment:
Q  108 gtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgt----gcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattga 203  Q
    ||||||||||||||| |||||| ||||||||||||| || || |||    ||| ||||||||||||  | ||| ||  |||||| |||  ||| ||||||    
T  36204516 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcctgtacgggcgttgtttgatttcgcatattgttgcggtgttcatttggttcatattga 36204417  T
Q  204 aatatcaacttcagtca-----attacaaattcaatcaataatttgggtgtcaacgttgcagatccagaag 269  Q
    || |||| |||||||||     || ||||||||||||||| ||||||  ||||||||||||||||| ||||    
T  36204416 aaaatcagcttcagtcaatcacatcacaaattcaatcaatgatttggacgtcaacgttgcagatccggaag 36204346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 105 - 238
Target Start/End: Original strand, 44596642 - 44596773
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    ||||||||||| |||||| |||| |||||||| |||||| || |||||||||| ||||||||| | || |||  |  | ||||||||| |||||||| ||    
T  44596642 tttgtgatttcctcgtctaagtgtgacgttgtattgttcgtcgtcttgtgcggcgtttgattt-gcgtcttgtggcagcgttcgtttagttcctattaaa 44596740  T
Q  205 atatcaacttcagtcaattacaaattcaatcaat 238  Q
    | ||| || |||||| ||||||||||||||||||    
T  44596741 aaatctacatcagtc-attacaaattcaatcaat 44596773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 105 - 254
Target Start/End: Complemental strand, 11300122 - 11299976
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||||||| ||||||  |||||||||||| || ||||||||   ||||||||||| || |||  |  |||||| || | || ||||||||    
T  11300122 tttgtgatttcgtcgtctaagtgcggtgttgtgttgttcgtcgtcttgtgcaacgtttgatttcgcgtcttgtcgcggtgttcattcattttctattgaa 11300023  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacg 254  Q
    | ||||    ||||| ||||||||||||| |||| ||||||| |||||||    
T  11300022 agatca---gcagtcgattacaaattcaaacaatgatttgggcgtcaacg 11299976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 132 - 270
Target Start/End: Complemental strand, 22038909 - 22038768
Alignment:
Q  132 gttgtgttgttcatcctcttgtgcgg---tgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaaatatcaacttcagtcaattacaaa 228  Q
    |||||||||||| |||| ||||| ||   |||||||||||| || ||| ||| ||| ||||||  ||| |||||||| ||| |||||||||||| ||| |    
T  22038909 gttgtgttgttcgtccttttgtgtggcgttgtttgatttcgcgtcttgttgtggtgctcgtttggttcatattgaaagatctacttcagtcaatcacata 22038810  T
Q  229 ttcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    |||||| ||| |||| |   |||| |||||||||||||||||    
T  22038809 ttcaataaatgattttgacatcaatgttgcagatccagaagc 22038768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 244
Target Start/End: Original strand, 36194683 - 36194826
Alignment:
Q  108 gtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcgg---tgtttgatttcg--tgttttg--gtgttgtgttcgtttaattcctat 200  Q
    |||||||||| |||| |||||||||||||||||||| || ||||||||||   ||||||||||||  |  ||||  |||  ||||||||||  ||| |||    
T  36194683 gtgatttcgttgtcttagtgcgacgttgtgttgttcgtcgtcttgtgcggcgttgtttgatttcgcatcctttgttgtgcggtgttcgtttggttcgtat 36194782  T
Q  201 tgaaatatcaacttcagtcaattacaaattcaatcaataatttg 244  Q
    ||||| |||| |||||  |||| ||||||||||||||| |||||    
T  36194783 tgaaagatcagcttcaaacaatcacaaattcaatcaatgatttg 36194826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 105 - 264
Target Start/End: Complemental strand, 38166359 - 38166202
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    ||||||||||||||||||||||||| ||||||||||||| |  |||| |||| |||||||||||   | ||  ||| ||||| |||| |||  |||||||    
T  38166359 tttgtgatttcgtcgtctgagtgcggcgttgtgttgttcgttgtctt-tgcgctgtttgatttcacatcttattgtggtgtttgtttgatttatattgaa 38166261  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatcc 264  Q
    | |||||||| ||| ||| | | |||||| |||| ||||||   ||||||||||||||||    
T  38166260 agatcaactt-agttaatcatagattcaagcaatgatttggacatcaacgttgcagatcc 38166202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 111 - 244
Target Start/End: Original strand, 9643369 - 9643505
Alignment:
Q  111 atttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtg---cggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaaata 207  Q
    ||||||||||| ||||||||||||||||||||| || ||||| |   || |||||||||||   | ||| ||  ||||||||||  ||| |||| ||| |    
T  9643369 atttcgtcgtccgagtgcgacgttgtgttgttcgtcgtcttgagcgacgttgtttgatttctcatcttgttgcagtgttcgtttggttcatattaaaaga 9643468  T
Q  208 tcaacttcagtcaattacaaattcaatcaataatttg 244  Q
    ||||||||||||||| ||| ||||||| ||| |||||    
T  9643469 tcaacttcagtcaatcacatattcaattaatgatttg 9643505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 105 - 259
Target Start/End: Complemental strand, 10259027 - 10258873
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||| ||| | || | | ||||||||||  |  |||| || | |||||||||||| || |||  |  ||||||||||| ||| | |||||    
T  10259027 tttgtgatttcgtcatctaattgtggcattgtgttgttagtggtcttatgtgatgtttgatttcgcgtcttgacgcggtgttcgtttagttcatgttgaa 10258928  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgca 259  Q
    | ||| || | ||||||||||||||||||||||| ||||||| | ||||||||||    
T  10258927 agatcgacattagtcaattacaaattcaatcaatgatttgggcgccaacgttgca 10258873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 105 - 270
Target Start/End: Original strand, 43095606 - 43095771
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    ||||||||| ||| |||| | ||| || ||||||||||  || |||||| ||||||||||||||| || |||      ||||| |||| ||||||||| |    
T  43095606 tttgtgattccgtagtctaattgcaacattgtgttgttagtcgtcttgtacggtgtttgatttcgcgtcttgtcacgatgttcatttagttcctattgga 43095705  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    | ||| || |||||||||||||| || ||||||| ||||||  ||||||  ||||||||| |||||    
T  43095706 agatcgacatcagtcaattacaagttaaatcaatgatttggccgtcaacagtgcagatccggaagc 43095771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 182 - 270
Target Start/End: Original strand, 18935837 - 18935925
Alignment:
Q  182 gtgttcgtttaattcctattgaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    ||||||||||  ||| |||||||| || |||||||| |||| | ||||||||| ||| |||||||  ||||||||||||||||| ||||    
T  18935837 gtgttcgtttggttcgtattgaaagattaacttcagacaatcaaaaattcaattaatgatttgggcatcaacgttgcagatccaaaagc 18935925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 105 - 169
Target Start/End: Complemental strand, 29120494 - 29120430
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcg 169  Q
    |||||||||||||||||| |||||| || ||||||||||||| |||||| ||  |||||||||||    
T  29120494 tttgtgatttcgtcgtctaagtgcggcgctgtgttgttcatcgtcttgtacgacgtttgatttcg 29120430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 214 - 270
Target Start/End: Complemental strand, 47320434 - 47320378
Alignment:
Q  214 tcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    ||||||||| ||| ||||||||||| ||||||  |||||||||||||||||||||||    
T  47320434 tcagtcaatcacagattcaatcaatgatttggacgtcaacgttgcagatccagaagc 47320378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 112 - 156
Target Start/End: Complemental strand, 49072852 - 49072808
Alignment:
Q  112 tttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcg 156  Q
    |||||||||||||||||||||||||||||||| || |||||||||    
T  49072852 tttcgtcgtctgagtgcgacgttgtgttgttcgtcgtcttgtgcg 49072808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 113 - 263
Target Start/End: Complemental strand, 48351310 - 48351159
Alignment:
Q  113 ttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcg-gtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaaatatcaa 211  Q
    |||||||||||||||||| ||||||||||| ||| ||||||| |  |||||||||||| || |||     ||||||||||  ||  |||||||| ||||     
T  48351310 ttcgtcgtctgagtgcgatgttgtgttgtttatcgtcttgtgggcttgtttgatttcgcgtcttgtcacggtgttcgtttggtttatattgaaagatcag 48351211  T
Q  212 cttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatc 263  Q
    ||||||||||| ||| |||||| | || ||||||  |||  |||||||||||    
T  48351210 cttcagtcaatcacatattcaacctatgatttggacgtccgcgttgcagatc 48351159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 107 - 245
Target Start/End: Original strand, 5119319 - 5119456
Alignment:
Q  107 tgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaaat 206  Q
    |||||||||||||||| ||||||   ||||||||||| |  |||| ||||| ||||||||| |||| ||   |  ||||||||||| ||||||||||||     
T  5119319 tgtgatttcgtcgtctaagtgcggtattgtgttgttcgttgtcttttgcggcgtttgattttgtgtcttatcgcggtgttcgtttagttcctattgaaag 5119418  T
Q  207 atcaacttcagtcaattacaaattcaatcaataatttgg 245  Q
    ||| || ||| |||| |||||||| ||||| | ||||||    
T  5119419 atcgacatcaatcaa-tacaaatttaatcattgatttgg 5119456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 198 - 259
Target Start/End: Complemental strand, 2069618 - 2069557
Alignment:
Q  198 tattgaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgca 259  Q
    |||||||||||||  || ||||||| | | ||||||||||| ||||||||||||||||||||    
T  2069618 tattgaaatatcagttttagtcaatcatagattcaatcaattatttgggtgtcaacgttgca 2069557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 182 - 259
Target Start/End: Complemental strand, 26090968 - 26090891
Alignment:
Q  182 gtgttcgtttaattcctattgaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgca 259  Q
    ||||||||||| ||| | |||||| ||| || ||||||||||| ||||||||  ||| ||||||| ||||||||||||    
T  26090968 gtgttcgtttagttcatcttgaaagatcgacatcagtcaattataaattcaactaatgatttgggcgtcaacgttgca 26090891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 4937890 - 4937958
Alignment:
Q  184 gttcgtttaattcctattgaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaa 252  Q
    |||||||| |||  |||||||| ||||||||||||| |||| ||||||||||||| |||| || |||||    
T  4937890 gttcgtttgatttttattgaaagatcaacttcagtcgattataaattcaatcaatgatttaggcgtcaa 4937958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 243
Target Start/End: Complemental strand, 40066184 - 40066048
Alignment:
Q  107 tgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaaat 206  Q
    ||||||||| |||||| |||||| ||||||||||||| || |||| ||| | |||||||||||  | |||  |   | || ||||| || |||| ||||     
T  40066184 tgtgatttcatcgtctaagtgcggcgttgtgttgttcgtcgtcttatgcagcgtttgatttcgcctcttgtcgcgatatttgtttagtttctatggaaag 40066085  T
Q  207 atcaacttcagtcaattacaaattcaatcaataattt 243  Q
    ||| || | | ||||||||||||||||||||||||||    
T  40066084 atcgacattaatcaattacaaattcaatcaataattt 40066048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 117 - 259
Target Start/End: Original strand, 9048652 - 9048796
Alignment:
Q  117 tcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtt---tgatttcgtgttttggtgttgtgttcgtttaattcctattgaaatatcaact 213  Q
    ||||||||||||| |||| | |||||  || |||||||||| |||   |||||||| || ||| ||  ||||||||||  || || |||||| || | ||    
T  9048652 tcgtctgagtgcggcgtt-tcttgtttgtcgtcttgtgcggcgttgtctgatttcgggtcttgttgcggtgttcgtttggtttcttttgaaagataagct 9048750  T
Q  214 tcagtcaattacaaattcaatcaataatttgggtgtcaacgttgca 259  Q
    ||||| ||| ||||||||||||||| ||||| | ||||||||||||    
T  9048751 tcagttaatcacaaattcaatcaatgatttgagcgtcaacgttgca 9048796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 263
Target Start/End: Original strand, 9713969 - 9714048
Alignment:
Q  184 gttcgtttaattcctattgaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatc 263  Q
    ||||||||  ||| ||||| || |||| |||||  |||| ||||||||||||||  ||||||| ||||||||||||||||    
T  9713969 gttcgtttctttcatattggaagatcagcttcaaacaatcacaaattcaatcaacgatttgggcgtcaacgttgcagatc 9714048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 106 - 153
Target Start/End: Complemental strand, 35395803 - 35395756
Alignment:
Q  106 ttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgt 153  Q
    |||| ||||||||||||||||||| ||||||||||||| || ||||||    
T  35395803 ttgtaatttcgtcgtctgagtgcggcgttgtgttgttcgtcgtcttgt 35395756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 143
Target Start/End: Original strand, 38434695 - 38434733
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttc 143  Q
    |||||||||||||||||| ||||||||||||| ||||||    
T  38434695 tttgtgatttcgtcgtcttagtgcgacgttgttttgttc 38434733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 194 - 262
Target Start/End: Complemental strand, 31359789 - 31359720
Alignment:
Q  194 ttcctattgaaatatcaacttcagtcaattacaaattcaatcaat-aatttgggtgtcaacgttgcagat 262  Q
    |||||||| ||| |||||||| ||||||| ||| ||||||||||  |||||||  |||||||||||||||    
T  31359789 ttcctatttaaagatcaactttagtcaatcacagattcaatcaaacaatttggaagtcaacgttgcagat 31359720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 270
Target Start/End: Complemental strand, 42032547 - 42032494
Alignment:
Q  217 gtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    |||||| ||| ||||||| ||| ||||||||| |||||||| ||||||||||||    
T  42032547 gtcaatcacatattcaataaatgatttgggtgccaacgttgaagatccagaagc 42032494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 83
Target Start/End: Original strand, 18935697 - 18935749
Alignment:
Q  31 tttttcccctttcttttaatttaaattagtggatttcacacatatcaaatttt 83  Q
    |||||||||||||||||||| ||||||||||  ||||||| | ||||| ||||    
T  18935697 tttttcccctttcttttaatctaaattagtgattttcacatacatcaagtttt 18935749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 228 - 264
Target Start/End: Original strand, 25273982 - 25274018
Alignment:
Q  228 attcaatcaataatttgggtgtcaacgttgcagatcc 264  Q
    |||||||||| |||||||| |||||||||||||||||    
T  25273982 attcaatcaaaaatttgggcgtcaacgttgcagatcc 25274018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 154
Target Start/End: Original strand, 37683878 - 37683914
Alignment:
Q  118 cgtctgagtgcgacgttgtgttgttcatcctcttgtg 154  Q
    |||||||||||| |||||||||||||||| |||||||    
T  37683878 cgtctgagtgcggcgttgtgttgttcatcgtcttgtg 37683914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 264
Target Start/End: Original strand, 45418609 - 45418649
Alignment:
Q  224 acaaattcaatcaataatttgggtgtcaacgttgcagatcc 264  Q
    ||||||||||||||| |||||||  ||||||||||||||||    
T  45418609 acaaattcaatcaatgatttgggcatcaacgttgcagatcc 45418649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 105 - 157
Target Start/End: Complemental strand, 47320525 - 47320473
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcgg 157  Q
    |||||||||||||||||| |||  ||| ||||||||||| || ||||||||||    
T  47320525 tttgtgatttcgtcgtctaagtaagaccttgtgttgttcgtcgtcttgtgcgg 47320473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 72; Significance: 8e-33; HSPs: 2)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 105 - 268
Target Start/End: Complemental strand, 10173 - 10010
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||||||| |||||| | |||| |||||| || |||||||||| ||||||||||| || |||  |  |||||| ||||||||||||||||    
T  10173 tttgtgatttcgtcgtctaagtgcggctttgttttgttcgtcgtcttgtgcggcgtttgatttcgcgtcttgtcgcggtgttcatttaattcctattgaa 10074  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaa 268  Q
    | ||| || ||  |||||||||||||||| |||| ||||| | |||||||||||||||||||||    
T  10073 agatcgacatcgatcaattacaaattcaaccaatgatttgagagtcaacgttgcagatccagaa 10010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 148 - 253
Target Start/End: Original strand, 38054 - 38159
Alignment:
Q  148 tcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaaatatcaacttcagtcaattacaaattcaatcaataatttgggt 247  Q
    |||||||||| || ||||||| ||| ||| |   ||||||||||| ||| |||||||| ||  ||||||||||||||||||||||||| || ||||||||    
T  38054 tcttgtgcggcgtatgatttcatgtcttgttacagtgttcgtttagttcatattgaaagatagacttcagtcaattacaaattcaatcgatgatttgggt 38153  T
Q  248 gtcaac 253  Q
    ||||||    
T  38154 gtcaac 38159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 105 - 270
Target Start/End: Complemental strand, 71995 - 71830
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||||||| |||||| ||||||||||||| |  |||||||||| ||||||||||  ||||||  |  ||||| ||| | |||||||||||    
T  71995 tttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgttgtcttgtgcggagtttgatttcacgttttgtcgcggtgtttgttcagttcctattgaa 71896  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    | ||| || | |||||||||||||||||| |||| |||||| ||||||||||| |||||| |||||    
T  71895 agatctacattagtcaattacaaattcaaccaatgatttggatgtcaacgttgtagatccggaagc 71830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634 (Bit Score: 67; Significance: 8e-30; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 105 - 263
Target Start/End: Original strand, 8470 - 8628
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||| ||| |||||| |||||| ||||||||| |||||||| | ||||||||||| || |||  |   |||||||||| |||||||||||    
T  8470 tttgtgatttcgtcatctaagtgcggcgttgtattgttcatcgtcttgtgcagcgtttgatttcgcgtcttgtcgcgatgttcgtttagttcctattgaa 8569  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatc 263  Q
    | ||| || ||||||  |||||||||||| |||| ||||||| ||||||||||||||||    
T  8570 agatcgacatcagtctcttacaaattcaaccaatgatttgggcgtcaacgttgcagatc 8628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603 (Bit Score: 67; Significance: 8e-30; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 25 - 270
Target Start/End: Original strand, 7601 - 7839
Alignment:
Q  25 tgcatctttttcccctttcttttaatttaaattagtggatttcacacatatcaaattttacattttgtgcnnnnnnnnngtttgtgatttcgtcgtctga 124  Q
    |||||||||| ||||||||||| ||||||||| ||||| ||||||| ||||||| |||| | |||||||           ||||||| || ||| |||||    
T  7601 tgcatcttttacccctttctttcaatttaaataagtggttttcacatatatcaagtttttccttttgtgtttt-------tttgtgaatttgtcatctga 7693  T
Q  125 gtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaaatatcaacttcagtcaatta 224  Q
    ||||| ||||||||||||  || ||||||| || |||||| |||| || ||| ||  |||||||||   || ||||||||| ||| ||||||||||||||    
T  7694 gtgcggcgttgtgttgtttgtcgtcttgtgtggcgtttgaattcgcgtcttgatgcagtgttcgttagttttctattgaaagatccacttcagtcaatta 7793  T
Q  225 caaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
     |||||| |||||| ||||||||||| |||||||| |||| |||||    
T  7794 taaattccatcaattatttgggtgtcgacgttgcatatccggaagc 7839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 107 - 270
Target Start/End: Original strand, 5987 - 6153
Alignment:
Q  107 tgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcgg---tgtttgatttcgtgttttggtgttgtgttcgtttaattcctattga 203  Q
    |||||||||||||||||||||| | | |||||||||| || ||||||||||   |||||||||||| || ||| ||  |||||| |||  ||| ||||||    
T  5987 tgtgatttcgtcgtctgagtgcaatgatgtgttgttcgtcgtcttgtgcggcgttgtttgatttcgcgtattgttgcggtgttcatttggttcatattga 6086  T
Q  204 aatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    ||| | ||||||||||||| ||| ||||||||||| |||||| |||||| ||||||||||| |||||    
T  6087 aatgttaacttcagtcaatcacatattcaatcaatgatttggatgtcaatgttgcagatccggaagc 6153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0888 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0888
Description:

Target: scaffold0888; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 108 - 268
Target Start/End: Complemental strand, 1813 - 1646
Alignment:
Q  108 gtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcgg---tgtttgatttcg--tgttttg--gtgttgtgttcgtttaattcctat 200  Q
    ||||||||||||||| ||||||||||| |||||||| || |||||| |||   ||||||||||||  | |||||  |||| ||||||||||  ||| |||    
T  1813 gtgatttcgtcgtcttagtgcgacgttctgttgttcgtcgtcttgtccggcgttgtttgatttcgcatcttttgttgtgtagtgttcgtttggttcgtat 1714  T
Q  201 tgaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaa 268  Q
    ||||| ||||||||||| |||| ||||||||||||||| |||||||| ||||||| | ||||||||||    
T  1713 tgaaagatcaacttcagacaatcacaaattcaatcaatgatttgggtatcaacgtagtagatccagaa 1646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 105 - 263
Target Start/End: Complemental strand, 32878 - 32720
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||||||| |||||| |||| |||||||| || |||||||||| ||||||||||| || |||  |  || || ||| | |||||||||||    
T  32878 tttgtgatttcgtcgtctaagtgcggcgttttgttgttcgtcgtcttgtgcggcgtttgatttcgcgtcttgtcgcggtatttgttcagttcctattgaa 32779  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatc 263  Q
    | ||| || ||| |||||||||||||||| |||| ||||||  ||||||||||||||||    
T  32778 agatctacatcaatcaattacaaattcaagcaatgatttggacgtcaacgttgcagatc 32720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 105 - 270
Target Start/End: Original strand, 15449 - 15615
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgttt-gatttcgtgttttggtgttgtgttcgtttaattcctattga 203  Q
    |||||||||||||| ||| ||||||  |||||||||||| || |||||||||| |||| ||||||| || |||  |  ||||| ||| | ||||||||||    
T  15449 tttgtgatttcgtcatctaagtgcggtgttgtgttgttcgtcgtcttgtgcggcgttttgatttcgcgtcttgtcgcggtgtttgttcatttcctattga 15548  T
Q  204 aatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    || ||| || |||||||||||||||||||| |||| ||||||  |||||| |||||||||| |||||    
T  15549 aagatctacatcagtcaattacaaattcaaccaatgatttggacgtcaacattgcagatccggaagc 15615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 105 - 270
Target Start/End: Complemental strand, 71431 - 71266
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    ||||| |||||||||||| || ||| ||||||||||||  ||  ||||||| |   ||||||||| || |||  || ||||||||||| |||||||| ||    
T  71431 tttgtaatttcgtcgtctaagggcggcgttgtgttgttagtcgacttgtgcagcagttgatttcgcgtcttgtcgtggtgttcgtttagttcctatttaa 71332  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    | |||  | ||||||||||| ||||||||||||| ||| ||||||||||||||||||||| |||||    
T  71331 agatcggcatcagtcaattataaattcaatcaatgattggggtgtcaacgttgcagatccggaagc 71266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 105 - 270
Target Start/End: Complemental strand, 92630 - 92462
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtt---tgatttcgtgttttggtgttgtgttcgtttaattcctatt 201  Q
    ||||||||||||||||||||||| |  ||||||||| ||| | ||||||||| ||||   |||||||  || ||| ||| ||||||||||  ||| ||||    
T  92630 tttgtgatttcgtcgtctgagtgtgttgttgtgttgctcaccgtcttgtgcgatgttgtttgatttcacgtcttgttgtggtgttcgtttggttcatatt 92531  T
Q  202 gaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    |||| ||||| || ||| ||| ||| ||||||||||| ||||||  |||||||||| ||||||||||||    
T  92530 gaaagatcaattttagtaaatcacagattcaatcaatgatttggacgtcaacgttgtagatccagaagc 92462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 105 - 270
Target Start/End: Complemental strand, 66173 - 66008
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||| ||||||| |||||  |||| |||||||| || ||||||| || || |||||| |  | |||  || ||||| ||||| || | |||| |    
T  66173 tttgtgattttgtcgtctaagtgcagcgttatgttgttcgtcgtcttgtgtggcgtctgattttgcatcttgtcgtggtgtttgtttagttacaattgga 66074  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    | ||| || |||||||||||||||||||| |||| ||||||||| ||||||||||||||| |||||    
T  66073 agatcgacatcagtcaattacaaattcaaccaatgatttgggtgccaacgttgcagatccggaagc 66008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0884 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0884
Description:

Target: scaffold0884; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 105 - 264
Target Start/End: Complemental strand, 2104 - 1945
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    ||||||||||| |||||| |||||| | || |||||||| || |||| || || |||||||||||  | |||  |  |||||  |||| |||||||||||    
T  2104 tttgtgatttcatcgtctaagtgcggcattttgttgttcgtcgtcttatgtggcgtttgatttcgcatcttgtcgcggtgtttttttagttcctattgaa 2005  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatcc 264  Q
    | ||| || | |||||||||||||||||| ||||  |||||| |||||||||||||||||    
T  2004 agatctacattagtcaattacaaattcaaccaatggtttgggcgtcaacgttgcagatcc 1945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 109 - 268
Target Start/End: Original strand, 93065 - 93228
Alignment:
Q  109 tgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcgg---tgtttgat-ttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    ||||||||||||||||||||  ||||||||||||  |  ||||||||||   |||||||| ||||||| ||| ||| ||||||||||  ||| |||||||    
T  93065 tgatttcgtcgtctgagtgctgcgttgtgttgtttgttgtcttgtgcggcgttgtttgatattcgtgtcttgttgtggtgttcgtttggttcatattgaa 93164  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaa 268  Q
    | |||   |||| ||||| ||| ||| ||||||| ||| ||  |||||||||||||||||||||    
T  93165 agatcggtttcactcaatcacatattgaatcaatgattaggacgtcaacgttgcagatccagaa 93228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 105 - 270
Target Start/End: Complemental strand, 1950 - 1785
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctcttgtgcggtgtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaa 204  Q
    |||||||||||||||||||| |||| | |   ||| ||  || |||||||||  ||||| ||||| || |||  |  |||||||||||||| |||||| |    
T  1950 tttgtgatttcgtcgtctgaatgcggcctcaggttattagtcatcttgtgcgtcgtttggtttcgcgtcttgtcgcggtgttcgtttaatttctattgga 1851  T
Q  205 atatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    | ||| || || || ||||||||||||||||||| |||||||   ||||||||||||||| |||||    
T  1850 agatcgacatcggtaaattacaaattcaatcaatgatttgggcaccaacgttgcagatccggaagc 1785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 270
Target Start/End: Original strand, 50788 - 50899
Alignment:
Q  159 gtttgatttcgtgttttggtgttgtgttcgtttaattcctattgaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgc 258  Q
    ||||||||||| ||||||  |  ||||| ||| | ||||| || ||| ||| || | |||||||||||||||||| |||| ||||||  |||||||||||    
T  50788 gtttgatttcgcgttttgtcgcggtgtttgttcatttcctcttaaaagatctacgttagtcaattacaaattcaaccaatgatttggacgtcaacgttgc 50887  T
Q  259 agatccagaagc 270  Q
    |||||| |||||    
T  50888 agatccggaagc 50899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 189 - 270
Target Start/End: Complemental strand, 31321 - 31240
Alignment:
Q  189 tttaattcctattgaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    |||| |||||||||||| ||| || ||| ||||||||||||||||||||  ||||| |  |||| ||||||||||| |||||    
T  31321 tttagttcctattgaaagatcgacatcactcaattacaaattcaatcaacgatttgagcatcaatgttgcagatccggaagc 31240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0618 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 264
Target Start/End: Original strand, 8105 - 8184
Alignment:
Q  182 gtgttcgtttaattcctattgaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatcc 264  Q
    ||||||||||| ||||| |||||| ||| || ||| |||| |||||||||||||   ||||||  ||||||||||||||||||    
T  8105 gtgttcgtttagttcctgttgaaagatcgacatcaatcaaatacaaattcaatc---aatttgaatgtcaacgttgcagatcc 8184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 151
Target Start/End: Complemental strand, 137076 - 137030
Alignment:
Q  105 tttgtgatttcgtcgtctgagtgcgacgttgtgttgttcatcctctt 151  Q
    |||||||||||||||||| ||| ||||||||| ||||||||| ||||    
T  137076 tttgtgatttcgtcgtcttagtacgacgttgttttgttcatcgtctt 137030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 201 - 270
Target Start/End: Complemental strand, 58123 - 58054
Alignment:
Q  201 tgaaatatcaacttcagtcaattacaaattcaatcaataatttgggtgtcaacgttgcagatccagaagc 270  Q
    ||||| |||| ||||||||||| ||| |||||||| || ||||||  |||||| |||||||||| |||||    
T  58123 tgaaagatcagcttcagtcaatcacagattcaatcgatgatttggacgtcaacattgcagatccggaagc 58054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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