View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20678_high_14 (Length: 254)
Name: NF20678_high_14
Description: NF20678
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20678_high_14 |
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Alignment Details
Target: chr8 (Bit Score: 156; Significance: 6e-83; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 61 - 243
Target Start/End: Original strand, 32034927 - 32035110
Alignment:
| Q |
61 |
tactcggagttttacaaatat-gatattaataatttatctttttctctatcttaaaaagttttatttttcttgtgctttgagtgaagtcaattataatac |
159 |
Q |
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| T |
32034927 |
tactcggagttttacaaatatagatattaataatttatctttttctctatcttaaaaagttttatttttcttgtactttgagtgaagccaattctaatac |
32035026 |
T |
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| Q |
160 |
atagtgatcacctaaatcgagtgcatctatacatgaaggttttacggttaatatttaaaattgtcatgttgatcttaccttcat |
243 |
Q |
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| T |
32035027 |
atagtgatcacctaaatcgagtgcatctatacatgaaggttttacagttaatatttaaaattgtcttgttgatcttaccttcat |
32035110 |
T |
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