View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20678_high_3 (Length: 463)
Name: NF20678_high_3
Description: NF20678
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20678_high_3 |
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Alignment Details
Target: chr8 (Bit Score: 64; Significance: 8e-28; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 244 - 335
Target Start/End: Original strand, 26678990 - 26679081
Alignment:
| Q |
244 |
tttatataaaagcatttgtaacaatgaataataaactttaattctttaatctaaattcaatttatatgaatattttgaattcaattgtatga |
335 |
Q |
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| T |
26678990 |
tttatgtaaaagtatttgtaacaatgaataataaactttgattctttaaacttgattcaatttatatgaatattttgaactcaattgtatga |
26679081 |
T |
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Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 399 - 445
Target Start/End: Original strand, 26679145 - 26679191
Alignment:
| Q |
399 |
aataatcaatctcaaaacaaatccactaaacagatacagtccatttt |
445 |
Q |
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| T |
26679145 |
aataatcaatctcaaaacgaatccactaaacagatacagtccatttt |
26679191 |
T |
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