View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2067_high_9 (Length: 248)
Name: NF2067_high_9
Description: NF2067
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2067_high_9 |
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Alignment Details
Target: chr1 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 9 - 232
Target Start/End: Complemental strand, 52769891 - 52769668
Alignment:
| Q |
9 |
agcacgttgtcttgtattgtaatattgtattggctatctattgggacttaactcaactaatcatccaatccattaatctttgttacgatgagatgacgat |
108 |
Q |
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| T |
52769891 |
agcatgttgtcttgtattgtaatattgtattggctatctattgggacttaactcaactaatcatccaatccattaatctttgttacgatgagatgacggt |
52769792 |
T |
|
| Q |
109 |
aacaacatcaattcgaattccaggaagctctgggtatttggatacacaccctgaaaggaaagtctctgtgtttaagaacccttacattttgtgtctcact |
208 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
52769791 |
aacaacatcaattcgaattccaggaagctctgggtatttggatatacaccctgaaagaaaagtctctgtgtttaagaacccttacattttgtgtctcact |
52769692 |
T |
|
| Q |
209 |
tctgtagctagcattggtggatta |
232 |
Q |
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|||||||||||||||||||||||| |
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| T |
52769691 |
tctgtagctagcattggtggatta |
52769668 |
T |
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