View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2067_low_12 (Length: 237)
Name: NF2067_low_12
Description: NF2067
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2067_low_12 |
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Alignment Details
Target: chr8 (Bit Score: 153; Significance: 3e-81; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 14077950 - 14078130
Alignment:
| Q |
1 |
tgctattagatcaactagcatgcaatagccacgactcttacgtagtgaaagaaaacgtatcagaagatcataggatattcatgtcagtttttatctattc |
100 |
Q |
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| T |
14077950 |
tgctcttagatcaactagcatgcaatatccacgactcttatgtagtgaaagaaaacgtatcagaagatcataggatattcatgccagtttttatctattc |
14078049 |
T |
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| Q |
101 |
acctatatccatcttccatcttgtaagcatcatgtgtcactccttgattgac-tattaacatatcagctgttattttcaaa |
180 |
Q |
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| T |
14078050 |
acctatatccatcttccatcttgtaagcatcacgtgtcactccttgattgacttattaacatatcagctgttattttcaaa |
14078130 |
T |
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Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 14082354 - 14082395
Alignment:
| Q |
180 |
atcagtaacatatcaattatagggtgtatttaccccattaat |
221 |
Q |
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| T |
14082354 |
atcagtaacatatcaattatagggtgtatttaccccattaat |
14082395 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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