View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20684_high_7 (Length: 396)

Name: NF20684_high_7
Description: NF20684
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20684_high_7
NF20684_high_7
[»] chr7 (28 HSPs)
chr7 (1-139)||(45411794-45411932)
chr7 (200-380)||(45411569-45411748)
chr7 (218-316)||(23274786-23274884)
chr7 (218-316)||(47437934-47438032)
chr7 (218-315)||(41331051-41331148)
chr7 (218-287)||(15021183-15021252)
chr7 (218-289)||(12007767-12007837)
chr7 (218-320)||(45284791-45284893)
chr7 (218-307)||(36931982-36932071)
chr7 (218-318)||(12935738-12935838)
chr7 (218-313)||(16200562-16200658)
chr7 (218-306)||(22548221-22548309)
chr7 (218-317)||(34267522-34267622)
chr7 (218-313)||(4611242-4611336)
chr7 (218-316)||(22774040-22774138)
chr7 (218-316)||(40518861-40518959)
chr7 (218-316)||(41853997-41854095)
chr7 (218-316)||(9877238-9877337)
chr7 (221-316)||(21066886-21066981)
chr7 (218-316)||(23102529-23102628)
chr7 (218-316)||(30806115-30806214)
chr7 (224-314)||(7876001-7876090)
chr7 (218-287)||(9712169-9712239)
chr7 (244-313)||(10236897-10236966)
chr7 (218-263)||(32047142-32047188)
chr7 (244-324)||(31475866-31475947)
chr7 (226-287)||(35612547-35612608)
chr7 (241-285)||(48525605-48525649)
[»] chr3 (38 HSPs)
chr3 (218-310)||(54408522-54408614)
chr3 (218-316)||(24303390-24303488)
chr3 (218-315)||(4227716-4227813)
chr3 (226-315)||(55383868-55383957)
chr3 (218-314)||(19222558-19222654)
chr3 (220-316)||(49983682-49983778)
chr3 (218-314)||(23653188-23653284)
chr3 (218-313)||(32776214-32776310)
chr3 (218-319)||(15005938-15006040)
chr3 (218-316)||(46844943-46845041)
chr3 (218-312)||(49443395-49443489)
chr3 (246-319)||(14160272-14160345)
chr3 (218-318)||(39719933-39720034)
chr3 (218-314)||(44764724-44764818)
chr3 (244-320)||(18764865-18764941)
chr3 (218-316)||(3748573-3748672)
chr3 (218-289)||(5173982-5174053)
chr3 (218-289)||(11995158-11995229)
chr3 (218-289)||(46817323-46817394)
chr3 (244-298)||(28951734-28951788)
chr3 (218-308)||(38949682-38949772)
chr3 (218-316)||(43280068-43280166)
chr3 (245-312)||(54230092-54230159)
chr3 (226-316)||(25883968-25884059)
chr3 (218-300)||(29531230-29531312)
chr3 (218-316)||(32144584-32144683)
chr3 (218-289)||(32401518-32401588)
chr3 (218-261)||(37740821-37740864)
chr3 (209-316)||(40192156-40192263)
chr3 (226-276)||(34102106-34102156)
chr3 (218-320)||(47098512-47098614)
chr3 (218-314)||(30779538-30779635)
chr3 (218-287)||(41411599-41411668)
chr3 (218-283)||(48515357-48515422)
chr3 (244-316)||(4236978-4237049)
chr3 (220-276)||(29098732-29098788)
chr3 (248-316)||(44364021-44364089)
chr3 (218-313)||(53432708-53432804)
[»] chr1 (29 HSPs)
chr1 (218-318)||(25036234-25036334)
chr1 (218-318)||(25041446-25041546)
chr1 (218-321)||(47469045-47469148)
chr1 (218-316)||(19564125-19564222)
chr1 (218-316)||(36666548-36666646)
chr1 (218-316)||(11860042-11860140)
chr1 (218-312)||(31124610-31124704)
chr1 (218-300)||(45416150-45416232)
chr1 (218-314)||(18607781-18607877)
chr1 (218-300)||(23991236-23991318)
chr1 (218-307)||(11333673-11333762)
chr1 (218-307)||(11491694-11491783)
chr1 (218-315)||(43021594-43021691)
chr1 (218-298)||(26909842-26909922)
chr1 (218-316)||(42490381-42490480)
chr1 (218-287)||(7191061-7191131)
chr1 (217-287)||(24910449-24910519)
chr1 (222-287)||(1247284-1247349)
chr1 (244-289)||(10632721-10632766)
chr1 (218-287)||(33843167-33843236)
chr1 (218-287)||(33950743-33950812)
chr1 (233-307)||(2610108-2610183)
chr1 (218-316)||(7166198-7166297)
chr1 (218-316)||(7180585-7180684)
chr1 (218-316)||(21265656-21265755)
chr1 (218-317)||(24874970-24875069)
chr1 (218-315)||(16997231-16997328)
chr1 (218-283)||(50119005-50119070)
chr1 (218-317)||(9866155-9866255)
[»] chr4 (45 HSPs)
chr4 (216-320)||(45139851-45139955)
chr4 (218-316)||(51890797-51890895)
chr4 (218-307)||(2629588-2629677)
chr4 (218-289)||(42664008-42664079)
chr4 (218-316)||(52757249-52757348)
chr4 (209-291)||(13088934-13089016)
chr4 (218-320)||(31852345-31852447)
chr4 (218-276)||(32760682-32760740)
chr4 (218-320)||(49264522-49264624)
chr4 (218-322)||(8564165-8564270)
chr4 (226-315)||(34353780-34353869)
chr4 (205-316)||(23705111-23705223)
chr4 (226-317)||(624479-624570)
chr4 (218-289)||(23924844-23924915)
chr4 (218-289)||(29406384-29406455)
chr4 (218-300)||(12625845-12625927)
chr4 (218-307)||(55021563-55021653)
chr4 (226-315)||(11294818-11294907)
chr4 (218-307)||(28465746-28465835)
chr4 (218-322)||(55055910-55056014)
chr4 (218-316)||(25235768-25235867)
chr4 (246-317)||(27091472-27091543)
chr4 (218-316)||(36132229-36132328)
chr4 (218-316)||(38848092-38848191)
chr4 (238-285)||(44175185-44175232)
chr4 (220-263)||(49634333-49634376)
chr4 (218-316)||(5326491-5326589)
chr4 (236-310)||(6841503-6841577)
chr4 (218-287)||(10402470-10402540)
chr4 (226-316)||(11375869-11375959)
chr4 (218-287)||(13578436-13578506)
chr4 (221-291)||(24704154-24704223)
chr4 (241-323)||(29584637-29584718)
chr4 (218-287)||(31852584-31852654)
chr4 (246-316)||(32293108-32293178)
chr4 (218-316)||(42002306-42002404)
chr4 (225-315)||(42044025-42044115)
chr4 (218-263)||(42073211-42073257)
chr4 (228-318)||(50457696-50457786)
chr4 (218-287)||(3784941-3785009)
chr4 (226-307)||(4647193-4647274)
chr4 (271-312)||(16066222-16066263)
chr4 (244-316)||(42411480-42411553)
chr4 (271-316)||(52015491-52015536)
chr4 (244-320)||(52031199-52031276)
[»] chr2 (17 HSPs)
chr2 (218-307)||(3596259-3596348)
chr2 (218-319)||(32189974-32190075)
chr2 (218-289)||(44558029-44558100)
chr2 (218-287)||(13242703-13242772)
chr2 (218-321)||(1964348-1964451)
chr2 (218-316)||(20919610-20919708)
chr2 (218-314)||(14663986-14664081)
chr2 (226-289)||(15939316-15939379)
chr2 (218-313)||(23919449-23919544)
chr2 (218-300)||(24581436-24581518)
chr2 (244-316)||(23405196-23405268)
chr2 (218-314)||(44666315-44666411)
chr2 (218-316)||(33228904-33229003)
chr2 (218-316)||(31411824-31411922)
chr2 (246-316)||(39761435-39761504)
chr2 (226-287)||(17487733-17487794)
chr2 (218-313)||(5612957-5613053)
[»] chr6 (27 HSPs)
chr6 (218-316)||(24319013-24319111)
chr6 (218-316)||(15305076-15305174)
chr6 (222-282)||(31952303-31952363)
chr6 (218-316)||(34268282-34268380)
chr6 (218-315)||(8443540-8443637)
chr6 (218-315)||(8452344-8452441)
chr6 (244-316)||(20568283-20568355)
chr6 (218-289)||(17534874-17534945)
chr6 (218-289)||(32283565-32283636)
chr6 (222-289)||(32620047-32620114)
chr6 (218-316)||(34574126-34574225)
chr6 (218-315)||(492903-493001)
chr6 (221-315)||(23610294-23610388)
chr6 (222-315)||(32788830-32788923)
chr6 (246-317)||(2488886-2488957)
chr6 (222-313)||(7771290-7771381)
chr6 (218-316)||(9435626-9435725)
chr6 (218-308)||(13158680-13158771)
chr6 (218-308)||(13163536-13163627)
chr6 (226-316)||(978114-978204)
chr6 (218-315)||(3294765-3294863)
chr6 (228-318)||(34432779-34432869)
chr6 (244-321)||(6658569-6658646)
chr6 (244-289)||(9689301-9689346)
chr6 (218-317)||(15963914-15964014)
chr6 (271-319)||(32193878-32193926)
chr6 (221-281)||(35038677-35038737)
[»] chr8 (37 HSPs)
chr8 (222-313)||(25890380-25890471)
chr8 (218-316)||(481011-481109)
chr8 (218-289)||(11231447-11231518)
chr8 (218-289)||(12770395-12770466)
chr8 (218-315)||(38283125-38283222)
chr8 (218-287)||(44444573-44444642)
chr8 (218-318)||(22274583-22274683)
chr8 (218-314)||(22437763-22437858)
chr8 (220-312)||(22717795-22717887)
chr8 (218-313)||(43846938-43847033)
chr8 (218-287)||(9370197-9370267)
chr8 (238-291)||(44615706-44615758)
chr8 (218-317)||(3187389-3187486)
chr8 (221-289)||(6851001-6851069)
chr8 (218-313)||(37535470-37535566)
chr8 (218-316)||(8265268-8265367)
chr8 (218-276)||(8827868-8827927)
chr8 (238-312)||(10201262-10201337)
chr8 (218-316)||(16449125-16449224)
chr8 (218-289)||(30676276-30676347)
chr8 (218-316)||(32719579-32719677)
chr8 (204-307)||(40393327-40393430)
chr8 (218-316)||(43283937-43284036)
chr8 (221-263)||(3828370-3828412)
chr8 (228-314)||(10573103-10573189)
chr8 (226-316)||(13059157-13059247)
chr8 (218-276)||(41865054-41865112)
chr8 (226-263)||(5328547-5328584)
chr8 (253-318)||(14181349-14181414)
chr8 (218-318)||(34472295-34472396)
chr8 (226-291)||(36177404-36177469)
chr8 (231-316)||(39362265-39362350)
chr8 (270-314)||(2426153-2426197)
chr8 (218-317)||(12273648-12273748)
chr8 (218-313)||(27077068-27077164)
chr8 (218-286)||(31406787-31406855)
chr8 (218-289)||(36433562-36433634)
[»] chr5 (32 HSPs)
chr5 (218-313)||(20430568-20430663)
chr5 (218-316)||(3198327-3198425)
chr5 (218-322)||(4067976-4068080)
chr5 (218-313)||(18928723-18928819)
chr5 (218-298)||(37684518-37684598)
chr5 (218-314)||(40276414-40276510)
chr5 (218-289)||(3166008-3166079)
chr5 (218-317)||(23292389-23292488)
chr5 (218-307)||(20145536-20145625)
chr5 (218-319)||(24456187-24456286)
chr5 (244-320)||(36045160-36045237)
chr5 (270-315)||(41127020-41127065)
chr5 (218-282)||(7171762-7171826)
chr5 (218-286)||(8571823-8571891)
chr5 (218-298)||(37553897-37553977)
chr5 (218-261)||(7143469-7143512)
chr5 (218-300)||(13462086-13462169)
chr5 (218-316)||(15241396-15241495)
chr5 (244-319)||(22498936-22499010)
chr5 (218-316)||(24477825-24477923)
chr5 (218-289)||(35580037-35580107)
chr5 (243-317)||(7462828-7462902)
chr5 (218-307)||(10404136-10404226)
chr5 (248-318)||(17666004-17666074)
chr5 (218-287)||(20707758-20707828)
chr5 (271-320)||(26590700-26590749)
chr5 (218-263)||(34208427-34208472)
chr5 (218-318)||(35515510-35515611)
chr5 (220-289)||(37636834-37636903)
chr5 (244-313)||(38642195-38642264)
chr5 (218-262)||(14804954-14804998)
chr5 (222-289)||(28758393-28758461)
[»] scaffold0519 (1 HSPs)
scaffold0519 (218-289)||(2934-3005)
[»] scaffold0116 (1 HSPs)
scaffold0116 (218-303)||(16149-16234)
[»] scaffold0009 (1 HSPs)
scaffold0009 (218-319)||(41625-41720)
[»] scaffold0264 (1 HSPs)
scaffold0264 (218-307)||(20286-20375)
[»] scaffold0250 (1 HSPs)
scaffold0250 (218-315)||(15006-15103)
[»] scaffold0154 (1 HSPs)
scaffold0154 (218-289)||(28793-28864)
[»] scaffold0088 (1 HSPs)
scaffold0088 (218-316)||(10797-10896)
[»] scaffold0063 (1 HSPs)
scaffold0063 (218-318)||(56321-56422)


Alignment Details
Target: chr7 (Bit Score: 139; Significance: 1e-72; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 45411932 - 45411794
Alignment:
Q  1 tattgaaaagcaaaagggaggacacttgtcttatagtagtaaattaggttcaatgtgtaattaattgtaataagtagttaagtacaccctaactaagaca 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45411932 tattgaaaagcaaaagggaggacacttgtcttatagtagtaaattaggttcaatgtgtaattaattgtaataagtagttaagtacaccctaactaagaca 45411833  T
Q  101 catgttaagatttttccaaatagaaaatactccgtattt 139  Q
    |||||||||||||||||||||||||||||||||||||||    
T  45411832 catgttaagatttttccaaatagaaaatactccgtattt 45411794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 200 - 380
Target Start/End: Complemental strand, 45411748 - 45411569
Alignment:
Q  200 ggtttagtagcctagtagtcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaac 299  Q
    |||||| ||||||||| |||||||||||||||||||||||||| | |||| |||||||||||||||||| ||||||||||||| |||||||||| |||||    
T  45411748 ggtttaatagcctagtggtcacacaattaattgtggaaaaatgggatgtctggggttcgaacccaaacccctgcataaattatacaatgttcttaccaac 45411649  T
Q  300 taagctaaactcacgggaactcaatacacaatttctatatttcacattcttaacatatgtcttaaagacatatgttaacat 380  Q
    | |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  45411648 tgagctaagctcacgggaactcgatacacaatttctatatttcacattcttaacatatgtctt-aagacatatgttaacat 45411569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 218 - 316
Target Start/End: Original strand, 23274786 - 23274884
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacggg 316  Q
    ||||||||||||||||||||||||| |||||||||||||||||| |   || |||||||||||||||||||| | | |||||| |||||| ||||||||    
T  23274786 tcacacaattaattgtggaaaaatggggtgtccggggttcgaactccggcccctgcataaattatgcaatgtccctaccaacttagctaagctcacggg 23274884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 218 - 316
Target Start/End: Complemental strand, 47438032 - 47437934
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacggg 316  Q
    ||||||| |||| |||||| || ||  |||||||||||| ||||||   || |||||||||||||||||||||| | ||||||||||||||||||||||    
T  47438032 tcacacagttaaatgtggagaagtggagtgtccggggtttgaacccctgcccctgcataaattatgcaatgttcctaccaactaagctaaactcacggg 47437934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 218 - 315
Target Start/End: Original strand, 41331051 - 41331148
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacgg 315  Q
    |||||||||||| |||||| || || |||||||||  |||||||||  ||| |||||||||||||||||||| | |||||||| |||||| |||||||    
T  41331051 tcacacaattaaatgtggagaagtggggtgtccggaattcgaaccccgacccctgcataaattatgcaatgtccctgccaactgagctaagctcacgg 41331148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 218 - 287
Target Start/End: Original strand, 15021183 - 15021252
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaat 287  Q
    ||||||| |||| |||||||||||||||||||||||||||||||||  ||  ||| ||||||||||||||    
T  15021183 tcacacatttaaatgtggaaaaatgaggtgtccggggttcgaaccccgactcctgtataaattatgcaat 15021252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 289
Target Start/End: Original strand, 12007767 - 12007837
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgt 289  Q
    ||||||||||||||||||| || |||| |||||||||||||||||| | || ||||||||||||| ||||||    
T  12007767 tcacacaattaattgtggagaagtgag-tgtccggggttcgaaccccagcccctgcataaattatacaatgt 12007837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 218 - 320
Target Start/End: Original strand, 45284791 - 45284893
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacggga 317  Q
    |||||||||||| ||| || || || ||||||||||||||||||||  ||| ||||||||||||| |||||| | |  ||||| |||||| ||||||| |    
T  45284791 tcacacaattaaatgttgagaagtggggtgtccggggttcgaaccccgacccctgcataaattattcaatgtccctatcaactgagctaagctcacggaa 45284890  T
Q  318 act 320  Q
    |||    
T  45284891 act 45284893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 307
Target Start/End: Complemental strand, 36932071 - 36931982
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaa 307  Q
    |||||||||||| ||| || || || ||||||||||||||||||||    | |||||||||||||||||||| | |||||||| ||||||    
T  36932071 tcacacaattaaatgtagagaagtggggtgtccggggttcgaaccccggaccctgcataaattatgcaatgtccctgccaactgagctaa 36931982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 218 - 318
Target Start/End: Complemental strand, 12935838 - 12935738
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacggga 317  Q
    |||||||||||| |||||| || || || ||| ||||||||||||| | || || ||||||||||||||||| | |||||||| || |||  ||||||||    
T  12935838 tcacacaattaaatgtggagaagtggggcgtctggggttcgaaccccatcccctacataaattatgcaatgtccctgccaactgagataagttcacggga 12935739  T
Q  318 a 318  Q
    |    
T  12935738 a 12935738  T

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Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 218 - 313
Target Start/End: Complemental strand, 16200658 - 16200562
Alignment:
Q  218 tcacacaatt-aattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcac 313  Q
    |||||||||| ||||||||| ||||| |||||| |||||||||||||  ||| ||||||| | |||||||| ||| | |||| |||||||| |||||    
T  16200658 tcacacaatttaattgtggagaaatggggtgtctggggttcgaaccccgacccctgcatataatatgcaatattcctaccaattaagctaagctcac 16200562  T

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Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 218 - 306
Target Start/End: Complemental strand, 22548309 - 22548221
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagcta 306  Q
    |||| ||||||| |||||| || || ||||| ||||||||||||||  ||| ||| |||||||||||||||| ||| |||||| |||||    
T  22548309 tcacgcaattaaatgtggagaagtggggtgttcggggttcgaaccctgacccctgtataaattatgcaatgtccttaccaactgagcta 22548221  T

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Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 218 - 317
Target Start/End: Original strand, 34267522 - 34267622
Alignment:
Q  218 tcacacaatt-aattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacggg 316  Q
    |||||||||| ||||||||| || ||| ||||||||||||||||||| | |  ||||||| | |||||||| ||| | |||||| |||||| ||||||||    
T  34267522 tcacacaatttaattgtggagaagtgaagtgtccggggttcgaaccccagctcctgcatataatatgcaatattcctaccaactgagctaagctcacggg 34267621  T
Q  317 a 317  Q
    |    
T  34267622 a 34267622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 218 - 313
Target Start/End: Complemental strand, 4611336 - 4611242
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcac 313  Q
    ||||||||||||||||||| || || |||||| | ||||||||||| | || || ||||||||||||||||| | | |||||| |||||| |||||    
T  4611336 tcacacaattaattgtggagaagtg-ggtgtctgtggttcgaaccccagcccctacataaattatgcaatgtccctaccaactgagctaagctcac 4611242  T

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Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 316
Target Start/End: Complemental strand, 22774138 - 22774040
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacggg 316  Q
    ||||||| |||| |||||| || || ||||||||||||| ||||||   || |||||||||||||||||||| | || ||| | |||||| ||||||||    
T  22774138 tcacacatttaaatgtggagaagtggggtgtccggggtttgaacccctgcccctgcataaattatgcaatgtccctgtcaattgagctaagctcacggg 22774040  T

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Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 316
Target Start/End: Original strand, 40518861 - 40518959
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacggg 316  Q
    |||||||||||| |||||| || || ||||||||| ||||||| || |||| || |||| |||||||||||| | | |||||| ||||||  |||||||    
T  40518861 tcacacaattaaatgtggagaagtggggtgtccggagttcgaatcccaacccctacatatattatgcaatgtccctaccaactgagctaagttcacggg 40518959  T

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Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 316
Target Start/End: Complemental strand, 41854095 - 41853997
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacggg 316  Q
    ||||| |||||| |||||| ||  | ||||||||||||| |||| |   || |||||||||||||||||||| | |||||||| |||||| ||||||||    
T  41854095 tcacataattaaatgtggagaagcggggtgtccggggtttgaactccgtcccctgcataaattatgcaatgtccctgccaactgagctaagctcacggg 41853997  T

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Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 218 - 316
Target Start/End: Original strand, 9877238 - 9877337
Alignment:
Q  218 tcacacaatt-aattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacggg 316  Q
    |||||||||| ||||||||| || || ||||||||||||||||||||   || ||||||| | |||||||| | | | |||||| |||||| ||||||||    
T  9877238 tcacacaatttaattgtggagaagtggggtgtccggggttcgaaccccggcccctgcatataatatgcaatatccctaccaactgagctaagctcacggg 9877337  T

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Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 221 - 316
Target Start/End: Complemental strand, 21066981 - 21066886
Alignment:
Q  221 cacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacggg 316  Q
    ||||||||| |||||| || |||| ||||||||||||||||||   || || |||| | |||||||| | | | |||||| |||||||||||||||    
T  21066981 cacaattaaatgtggagaagtgagatgtccggggttcgaaccccggcccctacatataatatgcaatatccctaccaactgagctaaactcacggg 21066886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 218 - 316
Target Start/End: Original strand, 23102529 - 23102628
Alignment:
Q  218 tcacacaatt-aattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacggg 316  Q
    |||||||||| ||||||||| || || ||||||||||||||||||||   || ||||||| | |||||||| | | | |||||| |||||| ||||||||    
T  23102529 tcacacaatttaattgtggagaagtggggtgtccggggttcgaaccccggcccctgcatataatatgcaatatccctaccaactgagctaagctcacggg 23102628  T

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Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 218 - 316
Target Start/End: Complemental strand, 30806214 - 30806115
Alignment:
Q  218 tcacacaatt-aattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacggg 316  Q
    |||||||||| ||||||||| || || | |||||||||||||||| |  ||| ||||||| | |||||||| | | | |||||| |||||||||||||||    
T  30806214 tcacacaatttaattgtggagaagtgggatgtccggggttcgaactccgacccctgcatataatatgcaatatccctaccaactgagctaaactcacggg 30806115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 314
Target Start/End: Complemental strand, 7876090 - 7876001
Alignment:
Q  224 aattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacg 314  Q
    ||||||||||||| || || |||||| || ||| |||||| | || |||||||||||||||||||| | | |||||| |||||| ||||||    
T  7876090 aattaattgtggagaagtggggtgtctggagtttgaacccgatcc-ctgcataaattatgcaatgtccctaccaactgagctaagctcacg 7876001  T

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Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 287
Target Start/End: Original strand, 9712169 - 9712239
Alignment:
Q  218 tcacacaatt-aattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaat 287  Q
    |||||||||| ||||||||| || || ||||||||||||||||||||  ||| ||||||| | ||||||||    
T  9712169 tcacacaatttaattgtggagaagtggggtgtccggggttcgaaccccgacccctgcatataatatgcaat 9712239  T

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Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 313
Target Start/End: Original strand, 10236897 - 10236966
Alignment:
Q  244 ggtgtccggggttcgaacc-caaacctctgcataaattatgcaatgttcttgccaactaagctaaactcac 313  Q
    ||||||||||||||||||| | ||||| |||||| |||||||| ||||||| |||||| || |||||||||    
T  10236897 ggtgtccggggttcgaacctcgaacct-tgcatacattatgcattgttcttaccaactgagttaaactcac 10236966  T

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Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 263
Target Start/End: Complemental strand, 32047188 - 32047142
Alignment:
Q  218 tcacacaatt-aattgtggaaaaatgaggtgtccggggttcgaaccc 263  Q
    |||||||||| ||||||||| || |||||||||||||||||||||||    
T  32047188 tcacacaatttaattgtggagaagtgaggtgtccggggttcgaaccc 32047142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 324
Target Start/End: Original strand, 31475866 - 31475947
Alignment:
Q  244 ggtgtccggggttcgaacccaaacctctgcata-aattatgcaatgttcttgccaactaagctaaactcacgggaactcaat 324  Q
    |||||| ||||||||||||| | || ||||||| ||| ||||||||| | |||||||| |||||  ||||||||||| ||||    
T  31475866 ggtgtcaggggttcgaaccccagcccctgcatataataatgcaatgtccctgccaactgagctatgctcacgggaacacaat 31475947  T

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Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 287
Target Start/End: Original strand, 35612547 - 35612608
Alignment:
Q  226 ttaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaat 287  Q
    ||||||||||| || ||  ||||||||||||| ||||| |||||||||||| | ||||||||    
T  35612547 ttaattgtggagaagtggagtgtccggggttcaaaccccaacctctgcatataatatgcaat 35612608  T

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Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 241 - 285
Target Start/End: Complemental strand, 48525649 - 48525605
Alignment:
Q  241 tgaggtgtccggggttcgaacccaaacctctgcataaattatgca 285  Q
    ||||||||||||||||||||||| |||| ||||||| | ||||||    
T  48525649 tgaggtgtccggggttcgaaccccaacccctgcatataatatgca 48525605  T

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Target: chr3 (Bit Score: 57; Significance: 1e-23; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 218 - 310
Target Start/End: Original strand, 54408522 - 54408614
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaact 310  Q
    ||||| |||||| |||||||||||| ||||||||||||||||||||  |||||||||||||||||||||||| | |||||| | |||||||||    
T  54408522 tcacataattaaatgtggaaaaatggggtgtccggggttcgaaccccgacctctgcataaattatgcaatgtccctgccaaatgagctaaact 54408614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 218 - 316
Target Start/End: Complemental strand, 24303488 - 24303390
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacggg 316  Q
    |||||||||||| |||||| || || ||||||||||||||||||||   || |||||||||||||||||||| | |||||||| |||||| ||||||||    
T  24303488 tcacacaattaaatgtggagaagtggggtgtccggggttcgaaccccggcccctgcataaattatgcaatgtccctgccaactgagctaagctcacggg 24303390  T

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Target: chr3; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 218 - 315
Target Start/End: Original strand, 4227716 - 4227813
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacgg 315  Q
    |||||||||||||| |||| || || ||||||||| ||||||||||  ||| |||||||||||||||||||| | | |||||| ||||||||||||||    
T  4227716 tcacacaattaattatggagaagtggggtgtccggagttcgaaccccgacccctgcataaattatgcaatgtccctaccaactgagctaaactcacgg 4227813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 226 - 315
Target Start/End: Original strand, 55383868 - 55383957
Alignment:
Q  226 ttaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacgg 315  Q
    |||| |||||| || || |||||| |||||||||||||   ||||||||||||||||||||||||| | ||||||||||||| |||||||    
T  55383868 ttaaatgtggagaagtggggtgtcaggggttcgaacccctgcctctgcataaattatgcaatgttcctaccaactaagctaagctcacgg 55383957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 218 - 314
Target Start/End: Original strand, 19222558 - 19222654
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacg 314  Q
    |||||||||||| |||||| || || ||||||||||||||||||||   || |||||||||||||||||||| | |||||||| || ||| ||||||    
T  19222558 tcacacaattaaatgtggagaagtggggtgtccggggttcgaaccccggcccctgcataaattatgcaatgtccctgccaactgagttaagctcacg 19222654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 220 - 316
Target Start/End: Original strand, 49983682 - 49983778
Alignment:
Q  220 acacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacggg 316  Q
    ||||||||||||||||| || |  |||||||||||||||||||| |||| ||||||||||||| |||||| | | |||||| ||||||  |||||||    
T  49983682 acacaattaattgtggagaagtagggtgtccggggttcgaaccccaacccctgcataaattatacaatgtccctaccaactgagctaagttcacggg 49983778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 218 - 314
Target Start/End: Original strand, 23653188 - 23653284
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacg 314  Q
    ||||||| || | |||||| || |||||||| ||||||||||||||  ||| ||||||| |||||||||||||||| |||||| || ||| ||||||    
T  23653188 tcacacattttaatgtggataagtgaggtgttcggggttcgaaccccgacccctgcatatattatgcaatgttcttaccaactgagttaagctcacg 23653284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 218 - 313
Target Start/End: Complemental strand, 32776310 - 32776214
Alignment:
Q  218 tcacacaattaa-ttgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcac 313  Q
    |||||||||||| ||| ||| || |||||||||||||||||||||||   || |||||||||||||||||||| | | |||||| |||||| |||||    
T  32776310 tcacacaattaaattggggagaagtgaggtgtccggggttcgaaccccggcccctgcataaattatgcaatgtccctaccaactgagctaagctcac 32776214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 218 - 319
Target Start/End: Complemental strand, 15006040 - 15005938
Alignment:
Q  218 tcacacaattaattgtggaaaaatgagg-tgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacggg 316  Q
    |||| ||||||| |||||| || || || ||||||| ||||||||||   |  |||||||||||||||||||||  |||||||| |||||||||||||||    
T  15006040 tcactcaattaaatgtggagaagtgtggatgtccggagttcgaaccccggctcctgcataaattatgcaatgtttctgccaactgagctaaactcacggg 15005941  T
Q  317 aac 319  Q
    |||    
T  15005940 aac 15005938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 218 - 316
Target Start/End: Original strand, 46844943 - 46845041
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacggg 316  Q
    ||||||| |||| |||||| || |  |||||||||||||||||| |  ||| |||||||||||||||||||| | |||||| | |||||| ||||||||    
T  46844943 tcacacatttaaatgtggagaagtagggtgtccggggttcgaactccgacccctgcataaattatgcaatgtccctgccaattgagctaagctcacggg 46845041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 218 - 312
Target Start/End: Original strand, 49443395 - 49443489
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactca 312  Q
    ||||||| |||| |||||| || || |||||||||||||||||| |   || |||||||||||||||||||| | |||||| | |||||||||||    
T  49443395 tcacacatttaaatgtggagaagtggggtgtccggggttcgaactccggcccctgcataaattatgcaatgtccctgccaattgagctaaactca 49443489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 246 - 319
Target Start/End: Original strand, 14160272 - 14160345
Alignment:
Q  246 tgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacgggaac 319  Q
    ||||||||||||||||||    || |||||| |||||||| ||||||||||||||||||||| |||| ||||||    
T  14160272 tgtccggggttcgaaccccggactttgcatatattatgcattgttcttgccaactaagctaagctcaagggaac 14160345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 318
Target Start/End: Complemental strand, 39720034 - 39719933
Alignment:
Q  218 tcacacaatt-aattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacggg 316  Q
    |||||||||| ||||||||| || || ||||||||||||||||||||   || ||||||| | |||||||| | | | |||||| |||||||||||||||    
T  39720034 tcacacaatttaattgtggagaagtggggtgtccggggttcgaaccccggcccctgcatataatatgcaatatccctaccaactgagctaaactcacggg 39719935  T
Q  317 aa 318  Q
    ||    
T  39719934 aa 39719933  T

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Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 314
Target Start/End: Complemental strand, 44764818 - 44764724
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacg 314  Q
    |||||||||||| |||||| || ||  |||||||||||||||||||   || |||||||||||||||||||| | | |||||| |||||| ||||||    
T  44764818 tcacacaattaaatgtggagaagtggagtgtccggggttcgaaccc--gcccctgcataaattatgcaatgtccctaccaactgagctaagctcacg 44764724  T

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Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 244 - 320
Target Start/End: Original strand, 18764865 - 18764941
Alignment:
Q  244 ggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacgggaact 320  Q
    ||||||| | ||||||||||  ||| |||||||||||||||||||| |||||||| | |||||| |||||| |||||    
T  18764865 ggtgtccagtgttcgaaccctgaccactgcataaattatgcaatgtccttgccaattgagctaagctcacgcgaact 18764941  T

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Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 218 - 316
Target Start/End: Original strand, 3748573 - 3748672
Alignment:
Q  218 tcacacaattaa-ttgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacggg 316  Q
    |||||||||||| ||||||| || |||| |||||||||||||||||| |||| ||||||| | ||| |||| | | | |||||| |||||| ||||||||    
T  3748573 tcacacaattaaattgtggagaagtgagatgtccggggttcgaaccccaacccctgcatataatatacaatatccctaccaactgagctaagctcacggg 3748672  T

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Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 218 - 289
Target Start/End: Original strand, 5173982 - 5174053
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgt 289  Q
    |||||||||||| |||||| || || ||||| ||||||||||||||   || ||||||||||||||||||||    
T  5173982 tcacacaattaaatgtggagaagtggggtgttcggggttcgaacccctgcccctgcataaattatgcaatgt 5174053  T

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Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 218 - 289
Target Start/End: Complemental strand, 11995229 - 11995158
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgt 289  Q
    |||||||||||| |||||| ||||||||||||||| ||| |||||    ||||| |||||||||||||||||    
T  11995229 tcacacaattaaatgtggagaaatgaggtgtccggagtttgaacctcggcctctacataaattatgcaatgt 11995158  T

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Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 218 - 289
Target Start/End: Original strand, 46817323 - 46817394
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgt 289  Q
    ||||||| |||| |||||| || || ||||| |||||||| ||||| ||||||| |||||||||||||||||    
T  46817323 tcacacatttaaatgtggagaagtggggtgttcggggttcaaaccccaacctctacataaattatgcaatgt 46817394  T

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Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 298
Target Start/End: Complemental strand, 28951788 - 28951734
Alignment:
Q  244 ggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaa 298  Q
    |||||| ||||||||||||| | || |||||||||||||||||||| ||||||||    
T  28951788 ggtgtctggggttcgaaccccagcccctgcataaattatgcaatgtccttgccaa 28951734  T

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Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 308
Target Start/End: Complemental strand, 38949772 - 38949682
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaa 308  Q
    |||||| ||||| |||||| || || ||||| ||||||||||||||   || |||||||||||||||||||| | | |||||| |||||||    
T  38949772 tcacactattaaatgtggagaagtggggtgttcggggttcgaaccccggcccctgcataaattatgcaatgtccctaccaactgagctaaa 38949682  T

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Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 316
Target Start/End: Complemental strand, 43280166 - 43280068
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacggg 316  Q
    ||||||| |||| |||||| || || |||||||||| |||||||||   || |||||||||||||||||||| | |||||| | |||||| ||| ||||    
T  43280166 tcacacatttaaatgtggagaagtggggtgtccgggattcgaaccccggcccctgcataaattatgcaatgtccctgccaattgagctaagctcgcggg 43280068  T

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Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 312
Target Start/End: Original strand, 54230092 - 54230159
Alignment:
Q  245 gtgtccggggttcgaa-cccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactca 312  Q
    |||||||||||||||| ||||||||| |||||| |||||||| ||| ||| |||||| |||||||||||    
T  54230092 gtgtccggggttcgaaccccaaacct-tgcatatattatgcattgtccttaccaactgagctaaactca 54230159  T

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Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 226 - 316
Target Start/End: Original strand, 25883968 - 25884059
Alignment:
Q  226 ttaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgca-atgttcttgccaactaagctaaactcacggg 316  Q
    |||| |||||| || || ||||||||||||||||||||  ||| ||||||| ||||||||  ||| | | ||||||||||||| ||||||||    
T  25883968 ttaaatgtggagaagtggggtgtccggggttcgaaccccgacccctgcatatattatgcatttgtccctaccaactaagctaagctcacggg 25884059  T

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Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 218 - 300
Target Start/End: Complemental strand, 29531312 - 29531230
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggt-gtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaact 300  Q
    |||||||||||| |||||| || |||||| ||||||||| |||||||  ||| || ||||||||||||||||||| | ||||||    
T  29531312 tcacacaattaaatgtggagaagtgaggttgtccggggt-cgaaccccgaccccttcataaattatgcaatgttcataccaact 29531230  T

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Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 218 - 316
Target Start/End: Complemental strand, 32144683 - 32144584
Alignment:
Q  218 tcacacaatt-aattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacggg 316  Q
    |||||||||| ||||||||| ||||| ||||||||||||||||||||   |  ||||||| | ||||||||   | | ||||||||||||| ||||||||    
T  32144683 tcacacaatttaattgtggagaaatggggtgtccggggttcgaaccccggctcctgcatataatatgcaatacccctaccaactaagctaagctcacggg 32144584  T

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Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 218 - 289
Target Start/End: Complemental strand, 32401588 - 32401518
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgt 289  Q
    |||||||||||| |||||| |  || ||||||||||||||||||||  ||| ||||||||||||| ||||||    
T  32401588 tcacacaattaaatgtggagatgtggggtgtccggggttcgaaccc-gacccctgcataaattatacaatgt 32401518  T

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Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 218 - 261
Target Start/End: Complemental strand, 37740864 - 37740821
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaac 261  Q
    |||||||||||| ||||||||| ||||||||||| |||||||||    
T  37740864 tcacacaattaaatgtggaaaagtgaggtgtccgaggttcgaac 37740821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 209 - 316
Target Start/End: Complemental strand, 40192263 - 40192156
Alignment:
Q  209 gcctagtagtcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaa 308  Q
    |||||| | |||||||||||| |||||| || ||  ||||||||| ||||||| |  ||||||||||| | |||||||| | | | |||||| ||||||     
T  40192263 gcctagaactcacacaattaaatgtggagaagtggagtgtccgggattcgaacaccgacctctgcatataatatgcaatatccctaccaactgagctaag 40192164  T
Q  309 ctcacggg 316  Q
    ||||||||    
T  40192163 ctcacggg 40192156  T

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Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 276
Target Start/End: Complemental strand, 34102156 - 34102106
Alignment:
Q  226 ttaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcata 276  Q
    |||| |||||| |||||||||||||||||||||||||| | || |||||||    
T  34102156 ttaaatgtggagaaatgaggtgtccggggttcgaaccccagcccctgcata 34102106  T

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Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 320
Target Start/End: Complemental strand, 47098614 - 47098512
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacggga 317  Q
    ||||| |||||| |||||| || ||||||||| ||||||||||||    || ||||||||||||| |||||| | |  ||||| ||||||  ||||||||    
T  47098614 tcacataattaaatgtggagaagtgaggtgtctggggttcgaacctcggcccctgcataaattatacaatgtccctatcaactgagctaagttcacggga 47098515  T
Q  318 act 320  Q
    |||    
T  47098514 act 47098512  T

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Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 314
Target Start/End: Original strand, 30779538 - 30779635
Alignment:
Q  218 tcacacaattaa-ttgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacg 314  Q
    |||||||||||| ||||||| || || ||||||| ||||||||||||  ||| ||||||| | |||||||| | | | |||||| |||||| ||||||    
T  30779538 tcacacaattaaattgtggagaagtggggtgtccagggttcgaaccccgacccctgcatataatatgcaatatccctaccaactgagctaagctcacg 30779635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 287
Target Start/End: Original strand, 41411599 - 41411668
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaat 287  Q
    |||||||||||| |||||| ||  | ||||||||||||| ||||||  | | ||||||||||||||||||    
T  41411599 tcacacaattaaatgtggagaagcggggtgtccggggtttgaaccccgaaccctgcataaattatgcaat 41411668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 283
Target Start/End: Original strand, 48515357 - 48515422
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatg 283  Q
    ||||||| |||| |||||| || || |||||||||||||||||||   ||| ||||||||||||||    
T  48515357 tcacacatttaaatgtggagaagtgtggtgtccggggttcgaacctcgacccctgcataaattatg 48515422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 244 - 316
Target Start/End: Original strand, 4236978 - 4237049
Alignment:
Q  244 ggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacggg 316  Q
    ||||||||||||||||||||   || |||||||||||||||||||| | | |||||| | |||| ||||||||    
T  4236978 ggtgtccggggttcgaaccccgccc-ctgcataaattatgcaatgtccctaccaactgaactaagctcacggg 4237049  T

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Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 220 - 276
Target Start/End: Complemental strand, 29098788 - 29098732
Alignment:
Q  220 acacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcata 276  Q
    |||||||||| | |||| ||||| ||||||||||||||||||||  ||| |||||||    
T  29098788 acacaattaaatatggagaaatggggtgtccggggttcgaaccccgacccctgcata 29098732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 316
Target Start/End: Complemental strand, 44364089 - 44364021
Alignment:
Q  248 tccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacggg 316  Q
    |||||||||||||| || ||||||||||| | |||||||| | | | |||||| || ||||||||||||    
T  44364089 tccggggttcgaactcagacctctgcatataatatgcaatatccctaccaactgagttaaactcacggg 44364021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 313
Target Start/End: Original strand, 53432708 - 53432804
Alignment:
Q  218 tcacacaatt-aattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcac 313  Q
    |||||||||| ||||||||| || || ||||||||||||||||||||   || ||||||| | |||||||| | | | |||||| || |||||||||    
T  53432708 tcacacaatttaattgtggagaagtggggtgtccggggttcgaaccccggcccctgcatataatatgcaatatccctaccaactgagttaaactcac 53432804  T

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Target: chr1 (Bit Score: 57; Significance: 1e-23; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 218 - 318
Target Start/End: Original strand, 25036234 - 25036334
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacggga 317  Q
    |||||||||||| |||||| ||||| ||||| ||||||||||| ||   || |||||||||||||||||||||| |||||||| ||||||||||||||||    
T  25036234 tcacacaattaaatgtggagaaatggggtgttcggggttcgaatcccggcccctgcataaattatgcaatgttcctgccaactgagctaaactcacggga 25036333  T
Q  318 a 318  Q
    |    
T  25036334 a 25036334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 218 - 318
Target Start/End: Original strand, 25041446 - 25041546
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacggga 317  Q
    |||||||||||| |||||| ||||| ||||| ||||||||||| ||   || |||||||||||||||||||||| |||||||| ||||||||||||||||    
T  25041446 tcacacaattaaatgtggagaaatggggtgttcggggttcgaatcccggcccctgcataaattatgcaatgttcctgccaactgagctaaactcacggga 25041545  T
Q  318 a 318  Q
    |    
T  25041546 a 25041546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 218 - 321
Target Start/End: Original strand, 47469045 - 47469148
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacggga 317  Q
    |||||||||||| |||||| || || |||||||||||||||||||  | || |||||||||||||||||||| | |||||||| |||||| ||||||||     
T  47469045 tcacacaattaaatgtggagaagtggggtgtccggggttcgaacctcagcccctgcataaattatgcaatgtccctgccaactgagctaagctcacgggg 47469144  T
Q  318 actc 321  Q
    ||||    
T  47469145 actc 47469148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 218 - 316
Target Start/End: Original strand, 19564125 - 19564222
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacggg 316  Q
    |||||||||||| |||||| || || |||||||| |||||||||||   || |||||||||||||||||||| |||||||||| |||||||||||||||    
T  19564125 tcacacaattaaatgtggagaagtggggtgtccgaggttcgaaccccggcc-ctgcataaattatgcaatgtccttgccaactgagctaaactcacggg 19564222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 218 - 316
Target Start/End: Original strand, 36666548 - 36666646
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacggg 316  Q
    ||||||||||||||||||| || || ||||||||||||||||||||   || |||||||||||||||||||| | | |||||| |||||| ||||||||    
T  36666548 tcacacaattaattgtggagaagtggggtgtccggggttcgaaccccggcccctgcataaattatgcaatgtccctaccaactgagctaagctcacggg 36666646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 218 - 316
Target Start/End: Complemental strand, 11860140 - 11860042
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacggg 316  Q
    |||||||||||| |||||| || || ||||||||||||||||||||  ||| ||  |||||||||||||||||  |||||||| |||||| ||||||||    
T  11860140 tcacacaattaaatgtggagaagtggggtgtccggggttcgaaccccgacccctatataaattatgcaatgtttctgccaactgagctaagctcacggg 11860042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 218 - 312
Target Start/End: Original strand, 31124610 - 31124704
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactca 312  Q
    |||||||||||| |||||| || || ||| ||||| ||||||||||   || |||||||||||||||||||| |||||||||| |||||| ||||    
T  31124610 tcacacaattaaatgtggagaagtggggtatccggagttcgaaccccggcccctgcataaattatgcaatgtccttgccaactgagctaagctca 31124704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 218 - 300
Target Start/End: Original strand, 45416150 - 45416232
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaact 300  Q
    |||||||||||| |||||| || || |||||||||| |||||||||   || |||||||||||||||||||||| ||||||||    
T  45416150 tcacacaattaaatgtggagaagtggggtgtccgggattcgaaccccggcccctgcataaattatgcaatgttcctgccaact 45416232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 218 - 314
Target Start/End: Original strand, 18607781 - 18607877
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacg 314  Q
    |||||||||||| ||| || || || ||||| |||||||||||||| | || |||||||||||||||||||| | | |||||| |||||| ||||||    
T  18607781 tcacacaattaaatgtagagaagtggggtgttcggggttcgaaccccagcccctgcataaattatgcaatgtccctaccaactcagctaagctcacg 18607877  T

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Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 218 - 300
Target Start/End: Original strand, 23991236 - 23991318
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaact 300  Q
    |||||||||||| |||||| || || ||||||| ||||||||||||   || |||||||||||||||||||| | ||||||||    
T  23991236 tcacacaattaaatgtggagaagtggggtgtccagggttcgaaccccggcccctgcataaattatgcaatgtccctgccaact 23991318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 307
Target Start/End: Complemental strand, 11333762 - 11333673
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaa 307  Q
    |||||||||||| |||||| || || |||||||||||||||||| |   || |||||||||||||||||||| | | |||||| ||||||    
T  11333762 tcacacaattaaatgtggagaagtggggtgtccggggttcgaactccggcccctgcataaattatgcaatgtccctaccaactgagctaa 11333673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 307
Target Start/End: Complemental strand, 11491783 - 11491694
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaa 307  Q
    |||||||||||| |||||| || || |||||||||||||||||| |   || |||||||||||||||||||| | | |||||| ||||||    
T  11491783 tcacacaattaaatgtggagaagtggggtgtccggggttcgaactccggcccctgcataaattatgcaatgtccctaccaactgagctaa 11491694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 315
Target Start/End: Original strand, 43021594 - 43021691
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacgg 315  Q
    |||||| ||||| |||||| || || |||||||| |||||||||||  ||| ||||||||| |||||| ||| | | ||||||||||||| |||||||    
T  43021594 tcacacgattaaatgtggagaagtggggtgtccgaggttcgaaccccgacccctgcataaaatatgcattgtccctaccaactaagctaagctcacgg 43021691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 218 - 298
Target Start/End: Original strand, 26909842 - 26909922
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaa 298  Q
    ||||||| |||| |||||| || || ||||||| ||||||||||||   ||||||||||||||||||||||| | ||||||    
T  26909842 tcacacatttaaatgtggagaagtggggtgtccagggttcgaacccccgcctctgcataaattatgcaatgtccctgccaa 26909922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 218 - 316
Target Start/End: Original strand, 42490381 - 42490480
Alignment:
Q  218 tcacacaatt-aattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacggg 316  Q
    |||||||||| ||||||||| || || ||||||||||||||||||||  ||| ||||||| | |||||||| | | | |||||| |||||| ||||||||    
T  42490381 tcacacaatttaattgtggagaagtggggtgtccggggttcgaaccccgacccctgcatataatatgcaatatccctaccaactgagctaagctcacggg 42490480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 287
Target Start/End: Complemental strand, 7191131 - 7191061
Alignment:
Q  218 tcacacaatt-aattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaat 287  Q
    |||||||||| ||||||||| || ||||||||||||||||||||||| | || ||||||| | ||||||||    
T  7191131 tcacacaatttaattgtggagaagtgaggtgtccggggttcgaaccccagcccctgcatataatatgcaat 7191061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 287
Target Start/End: Original strand, 24910449 - 24910519
Alignment:
Q  217 gtcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaat 287  Q
    ||||||||||||| | |||| || ||  |||||||||||||||||||  ||| ||||||||||||||||||    
T  24910449 gtcacacaattaaatatggagaagtggagtgtccggggttcgaaccctgacccctgcataaattatgcaat 24910519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 222 - 287
Target Start/End: Complemental strand, 1247349 - 1247284
Alignment:
Q  222 acaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaat 287  Q
    |||||||| |||||| || ||||||||| ||||||||||||   ||| ||||||||||||||||||    
T  1247349 acaattaaatgtggagaagtgaggtgtctggggttcgaacctcgacccctgcataaattatgcaat 1247284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 244 - 289
Target Start/End: Complemental strand, 10632766 - 10632721
Alignment:
Q  244 ggtgtccggggttcgaacccaaacctctgcataaattatgcaatgt 289  Q
    ||||||||||||||||||||  ||| ||||||||||||||||||||    
T  10632766 ggtgtccggggttcgaaccccgacccctgcataaattatgcaatgt 10632721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 218 - 287
Target Start/End: Original strand, 33843167 - 33843236
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaat 287  Q
    ||||||||||||  ||| | || || ||||| ||||||||||||||  ||||||||||||||||||||||    
T  33843167 tcacacaattaaacgtgaagaagtggggtgttcggggttcgaaccccgacctctgcataaattatgcaat 33843236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 218 - 287
Target Start/End: Complemental strand, 33950812 - 33950743
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaat 287  Q
    ||||||||||||  ||| | || || ||||| ||||||||||||||  ||||||||||||||||||||||    
T  33950812 tcacacaattaaacgtgaagaagtggggtgttcggggttcgaaccccgacctctgcataaattatgcaat 33950743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 233 - 307
Target Start/End: Complemental strand, 2610183 - 2610108
Alignment:
Q  233 tggaaaaatgaggtgtccggggttcgaacccaaac-ctctgcataaattatgcaatgttcttgccaactaagctaa 307  Q
    |||||||||| |||||||| |||| |||||   || |||||||||||||||||||||||||| |||| | ||||||    
T  2610183 tggaaaaatggggtgtccgaggtttgaaccttgacgctctgcataaattatgcaatgttcttaccaattgagctaa 2610108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 218 - 316
Target Start/End: Original strand, 7166198 - 7166297
Alignment:
Q  218 tcacacaattaa-ttgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacggg 316  Q
    |||||||||||| ||||||| || ||  ||||||||||||||||||| | || ||||||| | |||||||| | | | |||||| |||||| ||||||||    
T  7166198 tcacacaattaaattgtggagaagtggagtgtccggggttcgaaccccagcccctgcatataatatgcaatatccctaccaactgagctaagctcacggg 7166297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 218 - 316
Target Start/End: Original strand, 7180585 - 7180684
Alignment:
Q  218 tcacacaatt-aattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacggg 316  Q
    |||||||||| ||||||||| || || |||||||||||||||||| |   || ||||||| | |||||||| ||| | |||||| |||||| ||||||||    
T  7180585 tcacacaatttaattgtggagaagtggggtgtccggggttcgaactccggcccctgcatataatatgcaatattcctaccaactgagctaacctcacggg 7180684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 218 - 316
Target Start/End: Complemental strand, 21265755 - 21265656
Alignment:
Q  218 tcacacaatt-aattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacggg 316  Q
    |||||||||| ||||||||| || || ||||||||||||||||||||   || ||||||| | |||||||| | | | |||||| |||||| ||||||||    
T  21265755 tcacacaatttaattgtggagaagtggggtgtccggggttcgaaccccggcccctgcatataatatgcaatatccctaccaactgagctaagctcacggg 21265656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 218 - 317
Target Start/End: Complemental strand, 24875069 - 24874970
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacggga 317  Q
    |||||||||||| | |||| || || |||||||| |||||||||||   ||  ||||||||||||||||| | | | |||||| |||||| |||||||||    
T  24875069 tcacacaattaaatatggagaagtggggtgtccgaggttcgaacccctgcccatgcataaattatgcaatatccctaccaactgagctaagctcacggga 24874970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 315
Target Start/End: Original strand, 16997231 - 16997328
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacgg 315  Q
    |||||||||| | |||||| || ||||||||||||||||||||||    || ||||||||| |||||| |||   | |||||| |||||| |||||||    
T  16997231 tcacacaattgaatgtggagaagtgaggtgtccggggttcgaacctcggcccctgcataaaatatgcattgtctctaccaactgagctaagctcacgg 16997328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 283
Target Start/End: Complemental strand, 50119070 - 50119005
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatg 283  Q
    |||||||||||| |||||| || || |||||||||||||||||| |  ||| ||||||||| ||||    
T  50119070 tcacacaattaaatgtggagaagtggggtgtccggggttcgaactccgacccctgcataaaatatg 50119005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 317
Target Start/End: Original strand, 9866155 - 9866255
Alignment:
Q  218 tcacacaatt-aattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacggg 316  Q
    |||||||||| |||||||||||| ||  |||| |||| |||||||||  ||| ||||||| | |||||||| | | | |||||| |||||| ||||||||    
T  9866155 tcacacaatttaattgtggaaaagtggagtgttcgggattcgaaccccgacccctgcatataatatgcaatatccctaccaactgagctaagctcacggg 9866254  T
Q  317 a 317  Q
    |    
T  9866255 a 9866255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 53; Significance: 3e-21; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 216 - 320
Target Start/End: Original strand, 45139851 - 45139955
Alignment:
Q  216 agtcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacgg 315  Q
    |||||||||||||| |||||| || |||||||||||||||||||||||   || ||||||||||||| |||||| | | |||||| |||||| |||||||    
T  45139851 agtcacacaattaaatgtggagaagtgaggtgtccggggttcgaaccccggcccctgcataaattatacaatgtccctaccaactgagctaagctcacgg 45139950  T
Q  316 gaact 320  Q
    |||||    
T  45139951 gaact 45139955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 218 - 316
Target Start/End: Complemental strand, 51890895 - 51890797
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacggg 316  Q
    |||||||||||| |||||| || || ||||||||||||||||||||   || |||||||||||||||||||| | |||||||| |||||| ||||||||    
T  51890895 tcacacaattaaatgtggagaagtggggtgtccggggttcgaaccccggcccctgcataaattatgcaatgtccctgccaactgagctaagctcacggg 51890797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 218 - 307
Target Start/End: Complemental strand, 2629677 - 2629588
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaa 307  Q
    |||||||||||| |||||| || || ||||| ||||||||||||||  ||| |||||||||||||||||||| | |||||| | ||||||    
T  2629677 tcacacaattaaatgtggagaagtggggtgttcggggttcgaaccccgacccctgcataaattatgcaatgtccctgccaattgagctaa 2629588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 289
Target Start/End: Complemental strand, 42664079 - 42664008
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgt 289  Q
    |||||||||||| |||||| || || ||||||| || ||||||||| ||||||||| |||||||||||||||    
T  42664079 tcacacaattaaatgtggagaagtggggtgtccaggattcgaaccccaacctctgcgtaaattatgcaatgt 42664008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 316
Target Start/End: Original strand, 52757249 - 52757348
Alignment:
Q  218 tcacacaatt-aattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacggg 316  Q
    |||||||||| ||||||||| ||||| |||||| |  |||||||||| |||| ||||||| | |||||||| ||| |||||||| |||||| ||||||||    
T  52757249 tcacacaatttaattgtggagaaatggggtgtctgaagttcgaaccccaacccctgcatataatatgcaatattcctgccaactgagctaagctcacggg 52757348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 209 - 291
Target Start/End: Complemental strand, 13089016 - 13088934
Alignment:
Q  209 gcctagtagtcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttc 291  Q
    |||||||  |||||||||| | ||||||||| || |||||||| | |||||||||  ||| ||||||||||||||||||||||    
T  13089016 gcctagtgctcacacaatttaatgtggaaaagtggggtgtccgagattcgaaccccgacccctgcataaattatgcaatgttc 13088934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 218 - 320
Target Start/End: Complemental strand, 31852447 - 31852345
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacggga 317  Q
    |||||||||||| | |||| || || |||||||||||||||||||    ||  |||||||||||| |||||| | |||||||| |||||| |||||||||    
T  31852447 tcacacaattaaatatggagaagtggggtgtccggggttcgaacctcggcccttgcataaattatacaatgtccctgccaactgagctaagctcacggga 31852348  T
Q  318 act 320  Q
    |||    
T  31852347 act 31852345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 218 - 276
Target Start/End: Complemental strand, 32760740 - 32760682
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcata 276  Q
    ||||||||||||||||||| ||||| ||||||||| |||||||||| |||| |||||||    
T  32760740 tcacacaattaattgtggagaaatggggtgtccggagttcgaaccccaacccctgcata 32760682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 218 - 320
Target Start/End: Complemental strand, 49264624 - 49264522
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacggga 317  Q
    |||||||||||| |||||| || || |||||||||||||||||||    || |||||||| |||||||||||   ||| |||| || |||||||||||||    
T  49264624 tcacacaattaaatgtggagaagtggggtgtccggggttcgaacctcggcccctgcataagttatgcaatgtctctgctaactgagttaaactcacggga 49264525  T
Q  318 act 320  Q
    |||    
T  49264524 act 49264522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 322
Target Start/End: Complemental strand, 8564270 - 8564165
Alignment:
Q  218 tcacacaattaat-tgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacggg 316  Q
    ||||||||||||  |||||| ||||| | |||||| ||||||||| |  ||| ||| |||||||||||||||| | |||||| | |||||||||||||||    
T  8564270 tcacacaattaaaatgtggagaaatgggatgtccgaggttcgaactctgacccctgtataaattatgcaatgtccatgccaattgagctaaactcacggg 8564171  T
Q  317 aactca 322  Q
     |||||    
T  8564170 gactca 8564165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 226 - 315
Target Start/End: Complemental strand, 34353869 - 34353780
Alignment:
Q  226 ttaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacgg 315  Q
    ||||||||||| || || ||||||||||||||||||||  ||||||||||| | |||||||| | | | |||||| |||||| |||||||    
T  34353869 ttaattgtggagaagtggggtgtccggggttcgaaccctgacctctgcatataatatgcaatatccctaccaactgagctaagctcacgg 34353780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 205 - 316
Target Start/End: Original strand, 23705111 - 23705223
Alignment:
Q  205 agtagcctagtagtcacacaatt-aattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaag 303  Q
    ||||||||||| ||||||||||| ||||||||| || ||| ||||||||||||||||||| | |  ||||||  | |||||||| | | | |||||| ||    
T  23705111 agtagcctagtggtcacacaatttaattgtggagaagtgaagtgtccggggttcgaaccccagctcctgcatgtaatatgcaatatccctaccaactgag 23705210  T
Q  304 ctaaactcacggg 316  Q
    |||| ||||||||    
T  23705211 ctaagctcacggg 23705223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 226 - 317
Target Start/End: Complemental strand, 624570 - 624479
Alignment:
Q  226 ttaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacggga 317  Q
    |||| |||||| || || |||||| |||||||||||||   || |||||||||||||||||||| ||| |||||| || ||| |||||||||    
T  624570 ttaaatgtggagaagtggggtgtcaggggttcgaacccctgcccctgcataaattatgcaatgtccttaccaactgagttaagctcacggga 624479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 218 - 289
Target Start/End: Original strand, 23924844 - 23924915
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgt 289  Q
    |||||||| ||| |||||| || ||| |||||||||||||||||||   || ||||||||||||||||||||    
T  23924844 tcacacaaataaatgtggagaagtgaagtgtccggggttcgaaccccggcccctgcataaattatgcaatgt 23924915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 218 - 289
Target Start/End: Complemental strand, 29406455 - 29406384
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgt 289  Q
    |||||||||||| |||||| || || | ||||||| ||||||||||  ||| ||||||||||||||||||||    
T  29406455 tcacacaattaaatgtggagaagtgggttgtccggagttcgaaccccgacccctgcataaattatgcaatgt 29406384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 300
Target Start/End: Complemental strand, 12625927 - 12625845
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaact 300  Q
    |||||||||||| |||||| || || ||||||||| |||||||| |  ||| ||||||||||||||||| || ||| ||||||    
T  12625927 tcacacaattaaatgtggagaagtggggtgtccggtgttcgaactccgacccctgcataaattatgcaacgtccttaccaact 12625845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 307
Target Start/End: Complemental strand, 55021653 - 55021563
Alignment:
Q  218 tcacacaatt-aattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaa 307  Q
    |||||||||| ||||||||| || ||| |||||||||||||||||||  ||| ||||||| | |||||||| ||| | |||||| ||||||    
T  55021653 tcacacaatttaattgtggagaagtgaagtgtccggggttcgaaccccgacccctgcatataatatgcaatattcctaccaactgagctaa 55021563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 226 - 315
Target Start/End: Original strand, 11294818 - 11294907
Alignment:
Q  226 ttaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacgg 315  Q
    |||| |||||| || || ||||||||||||||||||||   || |||||||||||||||||||| | |||||| | || ||| |||||||    
T  11294818 ttaaatgtggagaagtggggtgtccggggttcgaaccccggcccctgcataaattatgcaatgtccctgccaattgagttaagctcacgg 11294907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 218 - 307
Target Start/End: Original strand, 28465746 - 28465835
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaa 307  Q
    ||||||||||||||||||| || ||||||||| || ||||||||||  ||| ||  || ||||||||||||| | |  ||||||||||||    
T  28465746 tcacacaattaattgtggagaagtgaggtgtctggagttcgaaccccgacccctagattaattatgcaatgtccctatcaactaagctaa 28465835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 322
Target Start/End: Complemental strand, 55056014 - 55055910
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacggga 317  Q
    |||||||||||| |||||| || ||  ||||||||||||||||||    || ||||||||| |||||| ||| | | |||||| |||||| ||||||||     
T  55056014 tcacacaattaaatgtggagaagtggcgtgtccggggttcgaacctcggcccctgcataaaatatgcattgtccctaccaactgagctaagctcacgggg 55055915  T
Q  318 actca 322  Q
    |||||    
T  55055914 actca 55055910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 218 - 316
Target Start/End: Original strand, 25235768 - 25235867
Alignment:
Q  218 tcacacaattaa-ttgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacggg 316  Q
    |||||||||||| ||||||| || ||  ||||| ||||||||||||| | || ||||||| | |||||||| | | | ||||||||||||| ||||||||    
T  25235768 tcacacaattaaattgtggagaagtggagtgtctggggttcgaaccccagcccctgcatataatatgcaatatccctaccaactaagctaagctcacggg 25235867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 246 - 317
Target Start/End: Original strand, 27091472 - 27091543
Alignment:
Q  246 tgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacggga 317  Q
    |||||||||||||||| |  ||| ||||| ||||||| |||||| | | |||||| ||||||||||||||||    
T  27091472 tgtccggggttcgaactccgacccctgcagaaattatacaatgtccctaccaactgagctaaactcacggga 27091543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 218 - 316
Target Start/End: Complemental strand, 36132328 - 36132229
Alignment:
Q  218 tcacacaatt-aattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacggg 316  Q
    |||||||||| ||||||||| || ||  |||||||||||||||||||  ||  ||||||| | |||||||| ||| | |||| | |||||||||||||||    
T  36132328 tcacacaatttaattgtggagaagtggagtgtccggggttcgaaccccgactcctgcatataatatgcaatattcctaccaattgagctaaactcacggg 36132229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 218 - 316
Target Start/End: Original strand, 38848092 - 38848191
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaa-ttatgcaatgttcttgccaactaagctaaactcacggg 316  Q
    ||||||| |||| |||||| || || ||||||||||||||||||||  ||| ||||||||| ||||||||| | | |||||| | |||||| ||| ||||    
T  38848092 tcacacatttaaatgtggagaagtggggtgtccggggttcgaaccccgacccctgcataaatttatgcaatatccctgccaattgagctaagctcgcggg 38848191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 238 - 285
Target Start/End: Complemental strand, 44175232 - 44175185
Alignment:
Q  238 aaatgaggtgtccggggttcgaacccaaacctctgcataaattatgca 285  Q
    ||||| |||||||||||||| ||||| |||||||||||| ||||||||    
T  44175232 aaatggggtgtccggggttcaaaccctaacctctgcatatattatgca 44175185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 220 - 263
Target Start/End: Original strand, 49634333 - 49634376
Alignment:
Q  220 acacaattaattgtggaaaaatgaggtgtccggggttcgaaccc 263  Q
    ||||||||||||||||| || ||| |||||||||||||||||||    
T  49634333 acacaattaattgtggagaagtgaagtgtccggggttcgaaccc 49634376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 316
Target Start/End: Complemental strand, 5326589 - 5326491
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacggg 316  Q
    ||||||||||||  ||||| ||||| |||||| ||  ||| ||||| | ||||| |||||||||| |||||| | | |||| | |||||||||||||||    
T  5326589 tcacacaattaaaggtggagaaatggggtgtctggatttcaaaccccagcctctacataaattatacaatgtccctaccaattgagctaaactcacggg 5326491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 310
Target Start/End: Original strand, 6841503 - 6841577
Alignment:
Q  236 aaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaact 310  Q
    |||| |||||||||||||||| ||||||  ||| ||||||| |||||| ||||| ||| |||||| || ||||||    
T  6841503 aaaagtgaggtgtccggggtttgaaccctgaccactgcatatattatgtaatgtccttaccaactgagttaaact 6841577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 287
Target Start/End: Complemental strand, 10402540 - 10402470
Alignment:
Q  218 tcacacaatt-aattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaat 287  Q
    |||||||||| ||||||||| || ||||||||||||||||||||| |  ||| ||||||| | ||||||||    
T  10402540 tcacacaatttaattgtggagaagtgaggtgtccggggttcgaactccgacccctgcatataatatgcaat 10402470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 316
Target Start/End: Original strand, 11375869 - 11375959
Alignment:
Q  226 ttaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacggg 316  Q
    ||||||||||| || |||||||||||||||||||||||   || ||||||| | |||||||| | | |  ||||| |||||| ||||||||    
T  11375869 ttaattgtggagaagtgaggtgtccggggttcgaaccccggcccctgcatataatatgcaatatccctatcaactgagctaagctcacggg 11375959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 287
Target Start/End: Original strand, 13578436 - 13578506
Alignment:
Q  218 tcacacaatt-aattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaat 287  Q
    |||||||||| ||||||||| || || ||||||||||||||||||||  ||| ||||||| | ||||||||    
T  13578436 tcacacaatttaattgtggagaagtggggtgtccggggttcgaaccccgacccctgcatataatatgcaat 13578506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 291
Target Start/End: Complemental strand, 24704223 - 24704154
Alignment:
Q  221 cacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttc 291  Q
    ||||||||| |||||| || |||| ||||| |||||||||| |  ||| ||||||||||||||||||||||    
T  24704223 cacaattaaatgtggagaagtgag-tgtccagggttcgaactccgacccctgcataaattatgcaatgttc 24704154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 323
Target Start/End: Complemental strand, 29584718 - 29584637
Alignment:
Q  241 tgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacgggaactcaa 323  Q
    ||||||||||||||||||||||    || ||||||||||||||||||| || |||||| | |||||| |||| ||| ||||||    
T  29584718 tgaggtgtccggggttcgaacctcggcccctgcataaattatgcaatg-tcctgccaattgagctaagctcatggggactcaa 29584637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 287
Target Start/End: Original strand, 31852584 - 31852654
Alignment:
Q  218 tcacacaattaa-ttgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaat 287  Q
    |||||||||||| ||||||| |||||  ||||||||||||||||||| |||| || |||| | ||||||||    
T  31852584 tcacacaattaaattgtggagaaatggagtgtccggggttcgaaccccaacccctacatataatatgcaat 31852654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 316
Target Start/End: Complemental strand, 32293178 - 32293108
Alignment:
Q  246 tgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacggg 316  Q
    ||||| |||||| |||||  ||| |||||||||||||||||||| |||  ||||| |||||| ||||||||    
T  32293178 tgtccagggttctaaccccgacccctgcataaattatgcaatgtccttatcaactgagctaagctcacggg 32293108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 316
Target Start/End: Complemental strand, 42002404 - 42002306
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacggg 316  Q
    |||||||||||| |||||| || || |||||| | ||||| ||||    || || ||||||||||||||||| | | ||||||||||||| ||||||||    
T  42002404 tcacacaattaaatgtggagaagtggggtgtctgaggttcaaaccacggcccctacataaattatgcaatgtccctaccaactaagctaagctcacggg 42002306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 315
Target Start/End: Original strand, 42044025 - 42044115
Alignment:
Q  225 attaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacgg 315  Q
    ||||| |||||| || || |||||||||||||| ||||    || ||||||||||||||||||||   |||||||| |||||| |||||||    
T  42044025 attaaatgtggagaagtggggtgtccggggttcaaacctcggcccctgcataaattatgcaatgtctctgccaactgagctaagctcacgg 42044115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 263
Target Start/End: Complemental strand, 42073257 - 42073211
Alignment:
Q  218 tcacacaatt-aattgtggaaaaatgaggtgtccggggttcgaaccc 263  Q
    |||||||||| |||||||||||||||  |||||||||||||||||||    
T  42073257 tcacacaatttaattgtggaaaaatggagtgtccggggttcgaaccc 42073211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 318
Target Start/End: Original strand, 50457696 - 50457786
Alignment:
Q  228 aattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacgggaa 318  Q
    ||||||||| || ||  |||||||||||||||||||   || ||||||| | |||||||| | ||| |||||| |||||| ||||||||||    
T  50457696 aattgtggagaagtggagtgtccggggttcgaaccctggcccctgcatataatatgcaatatccttaccaactgagctaagctcacgggaa 50457786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 287
Target Start/End: Complemental strand, 3785009 - 3784941
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaat 287  Q
    ||||||| |||| |||||| || || ||||| ||||||||||||||  ||| ||||||||||||||||||    
T  3785009 tcacacatttaaatgtggagaagtgtggtgttcggggttcgaaccctgacc-ctgcataaattatgcaat 3784941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 307
Target Start/End: Original strand, 4647193 - 4647274
Alignment:
Q  226 ttaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaa 307  Q
    ||||||||||| || ||| ||||||| |||||||||||  ||||||| ||||| |||||||  ||||| |||| | ||||||    
T  4647193 ttaattgtggagaagtgaagtgtccgtggttcgaaccctgacctctggataaaatatgcaacattcttaccaattgagctaa 4647274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 271 - 312
Target Start/End: Original strand, 16066222 - 16066263
Alignment:
Q  271 tgcataaattatgcaatgttcttgccaactaagctaaactca 312  Q
    ||||||||||||||||||||||| |||||| |||||| ||||    
T  16066222 tgcataaattatgcaatgttcttcccaactgagctaagctca 16066263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 316
Target Start/End: Original strand, 42411480 - 42411553
Alignment:
Q  244 ggtgtccggggttcgaacccaaacctctgcata-aattatgcaatgttcttgccaactaagctaaactcacggg 316  Q
    ||||||||||||||||||||  ||| ||||||| ||||||||| ||| | |||||||| |||||  ||||||||    
T  42411480 ggtgtccggggttcgaaccccgacccctgcatataattatgcattgtccctgccaactgagctatgctcacggg 42411553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 271 - 316
Target Start/End: Complemental strand, 52015536 - 52015491
Alignment:
Q  271 tgcataaattatgcaatgttcttgccaactaagctaaactcacggg 316  Q
    ||||||||||||||||||| | |||||||| |||||| ||||||||    
T  52015536 tgcataaattatgcaatgtccctgccaactgagctaagctcacggg 52015491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 320
Target Start/End: Complemental strand, 52031276 - 52031199
Alignment:
Q  244 ggtgtccggggttcgaacccaaacctctgcataaatta-tgcaatgttcttgccaactaagctaaactcacgggaact 320  Q
    |||||| |||||||||||||  ||| ||||||| | || |||| ||||| |||||||| |||||| ||||||||||||    
T  52031276 ggtgtctggggttcgaaccccgacccctgcatatactaatgcattgttcctgccaactgagctaagctcacgggaact 52031199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 50; Significance: 2e-19; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 218 - 307
Target Start/End: Complemental strand, 3596348 - 3596259
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaa 307  Q
    |||||||||||| |||||| || || ||||||||||||||||||||  ||| ||||||||||||||||||||   |||||||||||||||    
T  3596348 tcacacaattaaatgtggagaagtggggtgtccggggttcgaaccccgacccctgcataaattatgcaatgtctctgccaactaagctaa 3596259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 218 - 319
Target Start/End: Original strand, 32189974 - 32190075
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacggga 317  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||   || |||||||||||||||||||| | | |||||| | |||| ||| |||||    
T  32189974 tcacacaattaattgtagaaaagtgaggtgtccggggttcgaaccccggcccctgcataaattatgcaatgtccctaccaactgaactaagctcgcggga 32190073  T
Q  318 ac 319  Q
    ||    
T  32190074 ac 32190075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 218 - 289
Target Start/End: Complemental strand, 44558100 - 44558029
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgt 289  Q
    |||||||||||| |||||| || || |||||||||||||||||||| | || ||||||||||||||||||||    
T  44558100 tcacacaattaaatgtggagaagtggggtgtccggggttcgaaccccagcccctgcataaattatgcaatgt 44558029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 218 - 287
Target Start/End: Original strand, 13242703 - 13242772
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaat 287  Q
    |||||||||||| |||||| || ||||||||||| |||||||||||  ||| ||||||||||||||||||    
T  13242703 tcacacaattaaatgtggagaagtgaggtgtccgaggttcgaaccccgacccctgcataaattatgcaat 13242772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 321
Target Start/End: Complemental strand, 1964451 - 1964348
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacggga 317  Q
    |||||||||||| | |||| || || ||||||||||||| ||||||   || |||||||||||||||||||| | |||||| ||||||||  |||||||     
T  1964451 tcacacaattaaatatggagaagtggggtgtccggggtttgaaccccggcccctgcataaattatgcaatgtccctgccaattaagctaagttcacgggg 1964352  T
Q  318 actc 321  Q
    ||||    
T  1964351 actc 1964348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 218 - 316
Target Start/End: Complemental strand, 20919708 - 20919610
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacggg 316  Q
    ||||| |||||| |||||| || || ||||||||||||||||||||   || | |||||||||||||||||| | | |||||| |||||| ||||||||    
T  20919708 tcacataattaaatgtggagaagtggggtgtccggggttcgaaccccggccccagcataaattatgcaatgtccctaccaactgagctaagctcacggg 20919610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 218 - 314
Target Start/End: Complemental strand, 14664081 - 14663986
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacg 314  Q
    ||||||||||||||||||| || || ||||||||||||| |||| |   || |||||||||||||||||||| | | |||||| | |||||||||||    
T  14664081 tcacacaattaattgtggagaagtg-ggtgtccggggtttgaactctggcccctgcataaattatgcaatgtccctaccaactgaactaaactcacg 14663986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 226 - 289
Target Start/End: Complemental strand, 15939379 - 15939316
Alignment:
Q  226 ttaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgt 289  Q
    |||| |||||| || || ||||| |||||||||||||| |||||||||||| ||||||||||||    
T  15939379 ttaaatgtggagaagtggggtgttcggggttcgaaccctaacctctgcatatattatgcaatgt 15939316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 218 - 313
Target Start/End: Original strand, 23919449 - 23919544
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcac 313  Q
    |||||||||||| |||||| ||||| |||||| ||| |||||||||  ||| || |||| |||||||||||| | | |||||| |||||| |||||    
T  23919449 tcacacaattaaatgtggagaaatggggtgtctgggattcgaaccccgacccctccatatattatgcaatgtccctaccaactgagctaagctcac 23919544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 300
Target Start/End: Original strand, 24581436 - 24581518
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaact 300  Q
    ||||||||||||||||||| || |||||||| |||| | ||||||| | || ||||||| |||||||||| | | ||||||||    
T  24581436 tcacacaattaattgtggagaagtgaggtgttcgggatacgaaccccagcccctgcatatattatgcaatatccctgccaact 24581518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 316
Target Start/End: Complemental strand, 23405268 - 23405196
Alignment:
Q  244 ggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacggg 316  Q
    ||||||| ||||||||||||  ||| ||||||| |||||||||||| | | |||||| |||||| ||||||||    
T  23405268 ggtgtccagggttcgaaccccgacccctgcatatattatgcaatgtccctaccaactgagctaagctcacggg 23405196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 314
Target Start/End: Original strand, 44666315 - 44666411
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacg 314  Q
    ||||||||||||||||||| || ||   ||||||||||||||||||  | | ||||||| |||||||||| | | || ||| | |||||||||||||    
T  44666315 tcacacaattaattgtggagaagtggaatgtccggggttcgaaccccgatccctgcatatattatgcaatatccctgtcaattgagctaaactcacg 44666411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 218 - 316
Target Start/End: Original strand, 33228904 - 33229003
Alignment:
Q  218 tcacacaatt-aattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacggg 316  Q
    |||||||||| ||||||||| || || ||||||||||||||||||||   || ||||||| | |||||||| | | | |||||| |||||| ||||||||    
T  33228904 tcacacaatttaattgtggagaagtggggtgtccggggttcgaaccccggcccctgcatataatatgcaatatccctaccaactgagctaagctcacggg 33229003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 316
Target Start/End: Original strand, 31411824 - 31411922
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacggg 316  Q
    |||||||||||| |||| |||| || ||||| |||| |||||||   | || ||||||||||||| |||||||| | |||| | |||||| ||||||||    
T  31411824 tcacacaattaaatgtgaaaaagtggggtgttcgggattcgaacttcagcccctgcataaattatacaatgttcataccaattgagctaagctcacggg 31411922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 316
Target Start/End: Complemental strand, 39761504 - 39761435
Alignment:
Q  246 tgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacggg 316  Q
    |||||||||||| |||||| |||| |||||| |||||||| ||| |||  ||||| |||||||||||||||    
T  39761504 tgtccggggttcaaacccagacct-tgcatatattatgcattgtccttatcaactgagctaaactcacggg 39761435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 287
Target Start/End: Complemental strand, 17487794 - 17487733
Alignment:
Q  226 ttaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaat 287  Q
    ||||||||||| || ||| ||||||||||||||||||| | || ||||||| | ||||||||    
T  17487794 ttaattgtggagaagtgaagtgtccggggttcgaaccccagccactgcatataatatgcaat 17487733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 313
Target Start/End: Complemental strand, 5613053 - 5612957
Alignment:
Q  218 tcacacaattaa-ttgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcac 313  Q
    |||||||||||| ||||||| || || ||||||||||||||||||||   ||  |||||| | |||||||| | | |||||||| |||||| |||||    
T  5613053 tcacacaattaaattgtggagaagtggggtgtccggggttcgaaccccggcccttgcatataatatgcaatatccctgccaactgagctaagctcac 5612957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 1e-17; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 218 - 316
Target Start/End: Complemental strand, 24319111 - 24319013
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacggg 316  Q
    ||||||||||||||||||| || ||  |||||||||||||||||||   || |||||||||||||||||||| | | |||||| | |||||||||||||    
T  24319111 tcacacaattaattgtggagaagtggagtgtccggggttcgaaccccggcccctgcataaattatgcaatgtccctaccaactgaactaaactcacggg 24319013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 218 - 316
Target Start/End: Original strand, 15305076 - 15305174
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacggg 316  Q
    ||||| ||||||||||||| |||||  ||||  || |||||||||| |||  |||||||||||||||||||||| | |||||| || ||||||||||||    
T  15305076 tcacataattaattgtggagaaatggagtgtttggagttcgaaccccaacacctgcataaattatgcaatgttcctaccaactgagttaaactcacggg 15305174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 222 - 282
Target Start/End: Complemental strand, 31952363 - 31952303
Alignment:
Q  222 acaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattat 282  Q
    ||||||||||||||| || || |||||||||||||||||||| |||| |||||||||||||    
T  31952363 acaattaattgtggagaagtggggtgtccggggttcgaaccccaacccctgcataaattat 31952303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 218 - 316
Target Start/End: Complemental strand, 34268380 - 34268282
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacggg 316  Q
    ||||||||||||||||| | || |  ||||| ||||||||||||||  ||| |||||||||||||||||||| | | |||||  |||||| ||||||||    
T  34268380 tcacacaattaattgtgaagaagtagggtgttcggggttcgaaccctgacccctgcataaattatgcaatgtccctaccaacggagctaagctcacggg 34268282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 315
Target Start/End: Complemental strand, 8443637 - 8443540
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacgg 315  Q
    ||||| |||||| |||||| || || |||||||||||||| ||||   ||| |||||||||||||| ||||||| || ||||| || |||||||||||    
T  8443637 tcacagaattaaatgtggagaagtggggtgtccggggttctaaccatgacccctgcataaattatgtaatgttcctgtcaactgagttaaactcacgg 8443540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 315
Target Start/End: Complemental strand, 8452441 - 8452344
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacgg 315  Q
    ||||| |||||| |||||| || || |||||||||||||| ||||   ||| |||||||||||||| ||||||| || ||||| || |||||||||||    
T  8452441 tcacagaattaaatgtggagaagtggggtgtccggggttctaaccatgacccctgcataaattatgtaatgttcctgtcaactgagttaaactcacgg 8452344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 244 - 316
Target Start/End: Original strand, 20568283 - 20568355
Alignment:
Q  244 ggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacggg 316  Q
    ||||| ||||||||||||||  ||| ||||||| |||||||||||| ||| |||||| |||||| ||||||||    
T  20568283 ggtgttcggggttcgaaccccgacccctgcatatattatgcaatgtccttaccaactgagctaagctcacggg 20568355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 218 - 289
Target Start/End: Complemental strand, 17534945 - 17534874
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgt 289  Q
    |||||||||||| |||||| || | |||||||||| ||||||||||   || ||||||||||||||||||||    
T  17534945 tcacacaattaaatgtggagaagtcaggtgtccggagttcgaaccccggcccctgcataaattatgcaatgt 17534874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 218 - 289
Target Start/End: Complemental strand, 32283636 - 32283565
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgt 289  Q
    ||||| |||||| ||||||||| ||| ||||| |||||||||||||  |||  |||||||||||||||||||    
T  32283636 tcacataattaaatgtggaaaagtgaagtgtctggggttcgaaccccgacccttgcataaattatgcaatgt 32283565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 222 - 289
Target Start/End: Original strand, 32620047 - 32620114
Alignment:
Q  222 acaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgt 289  Q
    |||||||| |||||| ||||| ||||||| || ||||||||| |||  ||||||||||||||||||||    
T  32620047 acaattaaatgtggagaaatggggtgtccaggattcgaaccccaactcctgcataaattatgcaatgt 32620114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 218 - 316
Target Start/End: Original strand, 34574126 - 34574225
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaa-ttatgcaatgttcttgccaactaagctaaactcacggg 316  Q
    ||||||| |||| |||||| || || ||||| ||||||| ||||||  ||||||||||||| ||||||||||| | |||||| |||||||| ||| ||||    
T  34574126 tcacacatttaaatgtggagaagtggggtgttcggggtttgaaccccgacctctgcataaatttatgcaatgtccctgccaattaagctaagctcgcggg 34574225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 315
Target Start/End: Complemental strand, 493001 - 492903
Alignment:
Q  218 tcacacaatt-aattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacgg 315  Q
    |||||||||| ||||||||| || || ||||||| ||||||||||||   || ||||||| | |||||||| | |||||||||| |||||| |||||||    
T  493001 tcacacaatttaattgtggagaagtggggtgtccagggttcgaaccccggcccctgcatataatatgcaatatccttgccaactgagctaagctcacgg 492903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 315
Target Start/End: Original strand, 23610294 - 23610388
Alignment:
Q  221 cacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacgg 315  Q
    |||||||||||||| | || || ||||||| | ||| ||||||  ||| |||||||||||||||||||| | | |||||| |||||| |||||||    
T  23610294 cacaattaattgtgaagaagtggggtgtccagcgtttgaaccccgacccctgcataaattatgcaatgtccctaccaactgagctaagctcacgg 23610388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 222 - 315
Target Start/End: Original strand, 32788830 - 32788923
Alignment:
Q  222 acaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacgg 315  Q
    |||||||| |||| | || || ||||||||| |||||||||| |||| ||||||||||||| |||||  | | |||||| | ||||||||||||    
T  32788830 acaattaaatgtgtagaagtggggtgtccggagttcgaaccccaacccctgcataaattatacaatgaccctaccaactgaactaaactcacgg 32788923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 246 - 317
Target Start/End: Original strand, 2488886 - 2488957
Alignment:
Q  246 tgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacggga 317  Q
    |||||||||||||||| |  ||| ||||| ||||||| |||||| | | |||||| ||||||||||||||||    
T  2488886 tgtccggggttcgaactccgacccctgcagaaattatacaatgtccctaccaactgagctaaactcacggga 2488957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 222 - 313
Target Start/End: Complemental strand, 7771381 - 7771290
Alignment:
Q  222 acaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcac 313  Q
    |||||||| |||||| ||  ||||| |||||| || ||||||  ||| |||||||||||||||||||| | || ||||| |||||| |||||    
T  7771381 acaattaaatgtggagaagcgaggtatccgggatttgaaccctgacccctgcataaattatgcaatgtccctgtcaactgagctaagctcac 7771290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 218 - 316
Target Start/End: Complemental strand, 9435725 - 9435626
Alignment:
Q  218 tcacacaattaa-ttgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacggg 316  Q
    |||||||||||| ||||||| || ||  ||||||||||||||||||| | || ||||||| | |||||||| | | | |||||| |||||| ||||||||    
T  9435725 tcacacaattaaattgtggagaagtggagtgtccggggttcgaaccccagcccctgcatataatatgcaatatccctaccaactgagctaagctcacggg 9435626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 218 - 308
Target Start/End: Original strand, 13158680 - 13158771
Alignment:
Q  218 tcacacaatt-aattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaa 308  Q
    |||||||||| ||||||||| || || |||||||||||||||||||| |  ||||||||| | |||||||| | | | |||||| |||||||    
T  13158680 tcacacaatttaattgtggagaagtggggtgtccggggttcgaaccccagtctctgcatataatatgcaatatccctaccaacttagctaaa 13158771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 218 - 308
Target Start/End: Original strand, 13163536 - 13163627
Alignment:
Q  218 tcacacaatt-aattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaa 308  Q
    |||||||||| ||||||||| || || |||||||||||||||||||| |  ||||||||| | |||||||| | | | |||||| |||||||    
T  13163536 tcacacaatttaattgtggagaagtggggtgtccggggttcgaaccccagtctctgcatataatatgcaatatccctaccaacttagctaaa 13163627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 316
Target Start/End: Original strand, 978114 - 978204
Alignment:
Q  226 ttaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacggg 316  Q
    ||||||||||| || || ||||||||| ||||||||||  ||| ||||||| | |||||||| | | | | |||| |||||||||||||||    
T  978114 ttaattgtggagaagtggggtgtccggtgttcgaaccccgacccctgcatataatatgcaatatccctactaactgagctaaactcacggg 978204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 315
Target Start/End: Complemental strand, 3294863 - 3294765
Alignment:
Q  218 tcacacaatt-aattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacgg 315  Q
    |||||||||| ||||||| | || || ||||||||||||||||||||  ||| ||||||| | |||||||| | | | |||||| |||||| |||||||    
T  3294863 tcacacaatttaattgtgaagaagtggggtgtccggggttcgaaccccgacccctgcatataatatgcaatatccctaccaactgagctaagctcacgg 3294765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 318
Target Start/End: Original strand, 34432779 - 34432869
Alignment:
Q  228 aattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacgggaa 318  Q
    ||||||||| || ||  ||||| ||||||||||||| |||||||||||| | |||||||| | | | |||||| | |||| ||||||||||    
T  34432779 aattgtggagaagtggagtgtctggggttcgaaccccaacctctgcatataatatgcaatatccctaccaactgaactaagctcacgggaa 34432869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 321
Target Start/End: Original strand, 6658569 - 6658646
Alignment:
Q  244 ggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacgggaactc 321  Q
    ||||||||||||||||||||   || ||||||| |||||||||| | | | | ||||||||||| |||||||| ||||    
T  6658569 ggtgtccggggttcgaaccccggcccctgcatatattatgcaatttccctactaactaagctaagctcacggggactc 6658646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 289
Target Start/End: Original strand, 9689301 - 9689346
Alignment:
Q  244 ggtgtccggggttcgaacccaaacctctgcataaattatgcaatgt 289  Q
    ||||||| ||||||||||||  |||||| |||||||||||||||||    
T  9689301 ggtgtccagggttcgaaccccgacctctacataaattatgcaatgt 9689346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 317
Target Start/End: Original strand, 15963914 - 15964014
Alignment:
Q  218 tcacacaattaa-ttgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacggg 316  Q
    |||||||||||| ||||||| || ||  |||||| |||||||||||| | || ||||||||| |||||||| | | | |||||| |||||| |||| |||    
T  15963914 tcacacaattaaattgtggagaagtggagtgtccagggttcgaaccccagcccctgcataaaatatgcaatatccctaccaactgagctaagctcagggg 15964013  T
Q  317 a 317  Q
    |    
T  15964014 a 15964014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 271 - 319
Target Start/End: Original strand, 32193878 - 32193926
Alignment:
Q  271 tgcataaattatgcaatgttcttgccaactaagctaaactcacgggaac 319  Q
    |||||| |||||||| ||||||| |||||| ||||||||||||| ||||    
T  32193878 tgcatatattatgcattgttcttaccaactgagctaaactcacgagaac 32193926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 221 - 281
Target Start/End: Original strand, 35038677 - 35038737
Alignment:
Q  221 cacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaatta 281  Q
    ||||||||| ||| || ||||| ||||||||||||||||||||   || ||||||||||||    
T  35038677 cacaattaaatgtagagaaatggggtgtccggggttcgaaccccggcccctgcataaatta 35038737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 6e-16; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 222 - 313
Target Start/End: Original strand, 25890380 - 25890471
Alignment:
Q  222 acaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcac 313  Q
    ||||||||||||||| || || ||||||||||||||||||||   ||  ||||||||||||||||||| | | ||||||||||||| |||||    
T  25890380 acaattaattgtggagaagtggggtgtccggggttcgaaccccggcccttgcataaattatgcaatgtccctaccaactaagctaagctcac 25890471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 218 - 316
Target Start/End: Complemental strand, 481109 - 481011
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacggg 316  Q
    |||||||||||| |||||| || || |||||||||||||||||||    || |||||||||||||||||||| | | |||||| |||||| ||||||||    
T  481109 tcacacaattaaatgtggagaagtggggtgtccggggttcgaaccgcggcccctgcataaattatgcaatgtccctaccaactgagctaagctcacggg 481011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 289
Target Start/End: Complemental strand, 11231518 - 11231447
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgt 289  Q
    |||||||||||||||| || || || ||||||||||||||||||||   || ||||||||||||||||||||    
T  11231518 tcacacaattaattgtcgagaagtggggtgtccggggttcgaaccccggcccctgcataaattatgcaatgt 11231447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 289
Target Start/End: Complemental strand, 12770466 - 12770395
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgt 289  Q
    |||||||||||| |||||| || || ||||||||||||||||||||   || ||||||||||||||||||||    
T  12770466 tcacacaattaaatgtggagaagtggggtgtccggggttcgaaccccggcccctgcataaattatgcaatgt 12770395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 315
Target Start/End: Complemental strand, 38283222 - 38283125
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacgg 315  Q
    |||||||||||| |||||| || || |||||| |||||||||||||   || |||||||||||||  ||||| | |||||||| || |||||||||||    
T  38283222 tcacacaattaaatgtggagaagtggggtgtctggggttcgaaccccggcccctgcataaattatataatgtccctgccaactgagttaaactcacgg 38283125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 287
Target Start/End: Complemental strand, 44444642 - 44444573
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaat 287  Q
    ||||||||||||||||||| || || |||||||||||||||||||| | || ||||||| | ||||||||    
T  44444642 tcacacaattaattgtggagaagtggggtgtccggggttcgaaccccagcccctgcatataatatgcaat 44444573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 218 - 318
Target Start/End: Original strand, 22274583 - 22274683
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacggga 317  Q
    ||||||||||||||||||| || || ||||||||||||||||||||   |  ||||||| | |||||||| | | | |||||| ||||||||||| ||||    
T  22274583 tcacacaattaattgtggagaagtggggtgtccggggttcgaaccccggctcctgcatataatatgcaatatccctaccaactgagctaaactcatggga 22274682  T
Q  318 a 318  Q
    |    
T  22274683 a 22274683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 218 - 314
Target Start/End: Original strand, 22437763 - 22437858
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacg 314  Q
    |||||| ||||| |||||| || ||||||||| ||||||||||| | |||| |||||||||||||||||| | | | |||||| |||||| ||||||    
T  22437763 tcacacgattaaatgtggagaactgaggtgtctggggttcgaactc-aacccctgcataaattatgcaatatccctaccaactgagctaagctcacg 22437858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 220 - 312
Target Start/End: Complemental strand, 22717887 - 22717795
Alignment:
Q  220 acacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactca 312  Q
    |||||||||||||| || || || |||||||||||||||||||    || |||||||||||||||||||||| |  ||||| |||||| ||||    
T  22717887 acacaattaattgtcgagaagtggggtgtccggggttcgaacctcggcccctgcataaattatgcaatgttcctttcaactgagctaagctca 22717795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 218 - 313
Target Start/End: Complemental strand, 43847033 - 43846938
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcac 313  Q
    |||||||||||| |||||| || || ||||||| ||||||||||    ||| |||||||||||||||||||||| || ||||| ||| || |||||    
T  43847033 tcacacaattaaatgtggagaagtggggtgtccagggttcgaacatcgacccctgcataaattatgcaatgttcctgtcaactgagccaagctcac 43846938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 287
Target Start/End: Complemental strand, 9370267 - 9370197
Alignment:
Q  218 tcacacaatt-aattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaat 287  Q
    |||||||||| ||||||||| || |||||||||||||||||||||||  ||| ||||||| | ||||||||    
T  9370267 tcacacaatttaattgtggataagtgaggtgtccggggttcgaaccctgacccctgcatataatatgcaat 9370197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 44615758 - 44615706
Alignment:
Q  238 aaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttc 291  Q
    |||||||||||||||||||||||| | |||| ||||||| ||||||||||||||    
T  44615758 aaatgaggtgtccggggttcgaactctaacc-ctgcatatattatgcaatgttc 44615706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 317
Target Start/End: Original strand, 3187389 - 3187486
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacggga 317  Q
    |||||||||||| ||||||  | ||  |||||||  |||||||| | || ||||||||||||||||||||||   ||||||||||| ||| |||||||||    
T  3187389 tcacacaattaaatgtggaggagtggagtgtccgaagttcgaactccaatctctgcataaattatgcaatgt--ctgccaactaagttaagctcacggga 3187486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 289
Target Start/End: Original strand, 6851001 - 6851069
Alignment:
Q  221 cacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgt 289  Q
    |||| |||| |||||| || | |||||||||||||||||| ||  ||| ||||||||||||||||||||    
T  6851001 cacatttaaatgtggagaagtaaggtgtccggggttcgaatccctacccctgcataaattatgcaatgt 6851069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 313
Target Start/End: Original strand, 37535470 - 37535566
Alignment:
Q  218 tcacacaattaa-ttgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcac 313  Q
    |||||||||||| ||||||| |||||  |||||||||||||||||||  || |||||||| | |||||||| | | | |||| | ||||||||||||    
T  37535470 tcacacaattaaattgtggagaaatggagtgtccggggttcgaaccctgacttctgcatataatatgcaatatccctaccaattgagctaaactcac 37535566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 218 - 316
Target Start/End: Complemental strand, 8265367 - 8265268
Alignment:
Q  218 tcacacaattaa-ttgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacggg 316  Q
    |||||||||||| ||||||| || ||  |||||||||||||||||||  ||| ||||||| | |||||||| | | | |||||| |||||| ||||||||    
T  8265367 tcacacaattaaattgtggagaagtggagtgtccggggttcgaaccctgacccctgcatataatatgcaatatccctaccaactgagctaagctcacggg 8265268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 218 - 276
Target Start/End: Original strand, 8827868 - 8827927
Alignment:
Q  218 tcacacaattaa-ttgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcata 276  Q
    |||||||||||| ||||||| |||||| ||||||||| |||||||||  |||||||||||    
T  8827868 tcacacaattaaattgtggagaaatgaagtgtccgggattcgaaccccgacctctgcata 8827927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 238 - 312
Target Start/End: Complemental strand, 10201337 - 10201262
Alignment:
Q  238 aaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgt-tcttgccaactaagctaaactca 312  Q
    ||||||||||||||||||||||||||  ||| || |||| |||||||| | | |||| |||||||| |||||||||    
T  10201337 aaatgaggtgtccggggttcgaaccccgacccctacatatattatgcattatctcttaccaactaaactaaactca 10201262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 218 - 316
Target Start/End: Complemental strand, 16449224 - 16449125
Alignment:
Q  218 tcacacaattaa-ttgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacggg 316  Q
    |||||||||||| ||||||| || ||  ||||| ||||||||||||| |||| ||||||| | |||||||| | | | |||||| |||||| ||||||||    
T  16449224 tcacacaattaaattgtggagaagtggagtgtctggggttcgaaccccaacccctgcatataatatgcaatatccctaccaactgagctaagctcacggg 16449125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 218 - 289
Target Start/End: Original strand, 30676276 - 30676347
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgt 289  Q
    |||||||||||| |||||| ||||| |||||  ||| |||||||||  |||||| |||||||||| ||||||    
T  30676276 tcacacaattaaatgtggagaaatggggtgtttgggattcgaaccctgacctctacataaattatacaatgt 30676347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 218 - 316
Target Start/End: Original strand, 32719579 - 32719677
Alignment:
Q  218 tcacacaatt-aattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacggg 316  Q
    |||||||||| |||||||||||| ||  ||||||||| ||||||||| |||| ||||||| | |||||||| | | | |||||| |||||| ||||||||    
T  32719579 tcacacaatttaattgtggaaaagtggagtgtccgggattcgaaccccaacc-ctgcatataatatgcaatatccctaccaactgagctaagctcacggg 32719677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 204 - 307
Target Start/End: Complemental strand, 40393430 - 40393327
Alignment:
Q  204 tagtagcctagtagtcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaag 303  Q
    |||||||||||   ||||  |||||| |||||| ||  | ||||| ||||||||||||||  ||| |||||||||||||||||| ||| |||||| | ||    
T  40393430 tagtagcctagagctcacctaattaaatgtggagaagaggggtgttcggggttcgaaccccgacccctgcataaattatgcaatattcctgccaattgag 40393331  T
Q  304 ctaa 307  Q
    ||||    
T  40393330 ctaa 40393327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 218 - 316
Target Start/End: Original strand, 43283937 - 43284036
Alignment:
Q  218 tcacacaatt-aattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacggg 316  Q
    |||||||||| ||||||||| |||||  |||||||||||||||||||   |  ||||||| | |||||||| | | | |||||| |||||||||||||||    
T  43283937 tcacacaatttaattgtggagaaatggagtgtccggggttcgaaccccggctcctgcatataatatgcaatatccctaccaactgagctaaactcacggg 43284036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 263
Target Start/End: Complemental strand, 3828412 - 3828370
Alignment:
Q  221 cacaattaattgtggaaaaatgaggtgtccggggttcgaaccc 263  Q
    |||||||||||||||| || || ||||||||||||||||||||    
T  3828412 cacaattaattgtggagaagtggggtgtccggggttcgaaccc 3828370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 314
Target Start/End: Complemental strand, 10573189 - 10573103
Alignment:
Q  228 aattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacg 314  Q
    ||||||||| || ||  |||| |||||||||||||| |||| ||||||| | |||||||| | | | |||||| |||||||||||||    
T  10573189 aattgtggagaagtggagtgttcggggttcgaaccccaacccctgcatataatatgcaatatccctaccaactgagctaaactcacg 10573103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 316
Target Start/End: Original strand, 13059157 - 13059247
Alignment:
Q  226 ttaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacggg 316  Q
    |||| |||||| || || |||||| |||||||||||||   || |||||||||||||||| ||| | | |||||| |||||| ||||||||    
T  13059157 ttaaatgtggagaagtggggtgtcaggggttcgaacccctgcccctgcataaattatgcattgtccctaccaactgagctaagctcacggg 13059247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 276
Target Start/End: Original strand, 41865054 - 41865112
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcata 276  Q
    |||||||||||| ||||||||||||  ||||| |||||||||||||  ||| |||||||    
T  41865054 tcacacaattaaatgtggaaaaatggagtgtctggggttcgaaccctgacccctgcata 41865112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 263
Target Start/End: Original strand, 5328547 - 5328584
Alignment:
Q  226 ttaattgtggaaaaatgaggtgtccggggttcgaaccc 263  Q
    ||||||||||| || |||||||||||||||||||||||    
T  5328547 ttaattgtggagaagtgaggtgtccggggttcgaaccc 5328584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 253 - 318
Target Start/End: Original strand, 14181349 - 14181414
Alignment:
Q  253 ggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacgggaa 318  Q
    |||||||| || |||||||||||| |||||||||||| |||  ||||| | |||| ||||||||||    
T  14181349 ggttcgaatcccaacctctgcatatattatgcaatgtccttatcaactgatctaagctcacgggaa 14181414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 318
Target Start/End: Complemental strand, 34472396 - 34472295
Alignment:
Q  218 tcacacaatt-aattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacggg 316  Q
    |||||||||| |||||||||||| ||  ||||| ||||||||||||| |||  ||||||| | |||||||| | | | |||||| || ||| ||||||||    
T  34472396 tcacacaatttaattgtggaaaagtggagtgtctggggttcgaaccccaactcctgcatataatatgcaatatccctaccaactgagttaagctcacggg 34472297  T
Q  317 aa 318  Q
    ||    
T  34472296 aa 34472295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 291
Target Start/End: Complemental strand, 36177469 - 36177404
Alignment:
Q  226 ttaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttc 291  Q
    |||| |||| |||| |||||||| || ||||||||||| |||| |||||||||||||  |||||||    
T  36177469 ttaaatgtgaaaaagtgaggtgttcgaggttcgaaccctaacccctgcataaattatctaatgttc 36177404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 316
Target Start/End: Complemental strand, 39362350 - 39362265
Alignment:
Q  231 tgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacggg 316  Q
    |||||| || || |||||| ||||||||||| | |||||||||||| | |||||||| | | | |||||| |||||| ||||||||    
T  39362350 tgtggagaagtggggtgtctggggttcgaactccaacctctgcatataatatgcaatatccctaccaactgagctaagctcacggg 39362265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 314
Target Start/End: Original strand, 2426153 - 2426197
Alignment:
Q  270 ctgcataaattatgcaatgttcttgccaactaagctaaactcacg 314  Q
    |||||||||||||||||||||||| |||| | |||||| ||||||    
T  2426153 ctgcataaattatgcaatgttcttaccaaatgagctaagctcacg 2426197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 317
Target Start/End: Original strand, 12273648 - 12273748
Alignment:
Q  218 tcacacaattaa-ttgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacggg 316  Q
    |||||||||||| ||||||| |||||| |||||| |||||||||||| |  | ||| ||| | |||||||| ||| | | |||| |||||| ||||||||    
T  12273648 tcacacaattaaattgtggataaatgaagtgtccagggttcgaaccccagtccctgtatataatatgcaatattcctactaactgagctaagctcacggg 12273747  T
Q  317 a 317  Q
    |    
T  12273748 a 12273748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 313
Target Start/End: Original strand, 27077068 - 27077164
Alignment:
Q  218 tcacacaatt-aattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcac 313  Q
    |||||||||| ||||||||| || || |||||||||| |||||||||  ||| ||||||| | |||||||| | | | |||||| |||||| |||||    
T  27077068 tcacacaatttaattgtggagaagtggggtgtccgggattcgaaccccgacccctgcatataatatgcaatatccctaccaactgagctaagctcac 27077164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 286
Target Start/End: Complemental strand, 31406855 - 31406787
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaa 286  Q
    |||||||||||| |||||| || || ||| |||| |||||||||||   || |||||||||||||||||    
T  31406855 tcacacaattaaatgtggagaagtgtggtatccgaggttcgaaccccggcccctgcataaattatgcaa 31406787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 289
Target Start/End: Complemental strand, 36433634 - 36433562
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaa-cccaaacctctgcataaattatgcaatgt 289  Q
    |||||||||||| |||||| ||||| |||||||| | |||||| ||| |||| ||| ||||||||| ||||||    
T  36433634 tcacacaattaaatgtggagaaatggggtgtccgagattcgaacccccaacccctgtataaattatacaatgt 36433562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 6e-16; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 218 - 313
Target Start/End: Complemental strand, 20430663 - 20430568
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcac 313  Q
    ||||||||||||  ||||| ||||| |||||||||  ||||||||| | ||||||||||||||||  ||||| | | |||||||||||||||||||    
T  20430663 tcacacaattaaaggtggagaaatggggtgtccggatttcgaaccccagcctctgcataaattatataatgtccctaccaactaagctaaactcac 20430568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 218 - 316
Target Start/End: Complemental strand, 3198425 - 3198327
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacggg 316  Q
    ||||| |||||| |||||| || |  |||||||||||||||||||  |||| ||||||| |||||||||||| | | |||||| |||||| ||||||||    
T  3198425 tcacataattaaatgtggagaagtagggtgtccggggttcgaacctcaacccctgcatatattatgcaatgtccctaccaactgagctaagctcacggg 3198327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 218 - 322
Target Start/End: Complemental strand, 4068080 - 4067976
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacggga 317  Q
    |||||||||||| |||||| || || |||||||||||||||||||    || ||||||||| |||||| ||| | | |||||| |||||| ||||||||     
T  4068080 tcacacaattaaatgtggagaagtggggtgtccggggttcgaacctcgccccctgcataaaatatgcattgtccctaccaactgagctaagctcacgggg 4067981  T
Q  318 actca 322  Q
    |||||    
T  4067980 actca 4067976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 218 - 313
Target Start/End: Complemental strand, 18928819 - 18928723
Alignment:
Q  218 tcacacaatt-aattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcac 313  Q
    |||||||||| || ||||||||| ||||||||||| ||||||||| |  ||| |||||||||||||||||| | | | |||||| |||||| |||||    
T  18928819 tcacacaatttaaatgtggaaaagtgaggtgtccgtggttcgaacaccgacccctgcataaattatgcaatatccctaccaactgagctaagctcac 18928723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 218 - 298
Target Start/End: Original strand, 37684518 - 37684598
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaa 298  Q
    |||||||||||| |||||| || || |||||| || |||||||||   |||||||||||||||||||||||| | ||||||    
T  37684518 tcacacaattaaatgtggataagtggggtgtctggagttcgaacctcgacctctgcataaattatgcaatgtccctgccaa 37684598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 218 - 314
Target Start/End: Original strand, 40276414 - 40276510
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacg 314  Q
    ||||||||||||||||||| || || || |||||||||||||| |  | || ||||||| | |||||||| ||| | |||||| |||||||||||||    
T  40276414 tcacacaattaattgtggagaagtggggcgtccggggttcgaatctcagcccctgcatataatatgcaatattcctaccaactgagctaaactcacg 40276510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 218 - 289
Target Start/End: Complemental strand, 3166079 - 3166008
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgt 289  Q
    ||||||| |||| ||||||||| || || ||||| ||||||||||| |||| || |||||||||||||||||    
T  3166079 tcacacagttaaatgtggaaaagtggggcgtccgaggttcgaaccccaacccctacataaattatgcaatgt 3166008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 218 - 317
Target Start/End: Original strand, 23292389 - 23292488
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacggga 317  Q
    ||||||||||||||||||| || || |||||||| ||||||||||| || | ||||||| |  ||||||| | | | |||||| |||||| |||||||||    
T  23292389 tcacacaattaattgtggagaagtggggtgtccgaggttcgaaccccaaaccctgcatataacatgcaatatccctaccaactgagctaagctcacggga 23292488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 218 - 307
Target Start/End: Original strand, 20145536 - 20145625
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaa 307  Q
    |||||||||||| |||||| || || |||||||| |||||||||||   ||  ||||||||||||||||| | | | |||||||||||||    
T  20145536 tcacacaattaaatgtggagaagtggggtgtccgaggttcgaaccccggcccttgcataaattatgcaatatccctaccaactaagctaa 20145625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 218 - 319
Target Start/End: Complemental strand, 24456286 - 24456187
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacggga 317  Q
    ||||||| |||| |||||| || || |||||||||||||||||| |  ||| ||||||||||||||||||| || |||||| | |||||  |||||||||    
T  24456286 tcacacatttaactgtggagaagtg-ggtgtccggggttcgaactccgacccctgcataaattatgcaatg-tcctgccaattgagctatgctcacggga 24456189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 244 - 320
Target Start/End: Original strand, 36045160 - 36045237
Alignment:
Q  244 ggtgtccggggttcgaacccaaacctctgcata-aattatgcaatgttcttgccaactaagctaaactcacgggaact 320  Q
    ||||||||||||||||||||  ||| ||||||| ||| ||||| |||||||| ||||| |||||  ||||||||||||    
T  36045160 ggtgtccggggttcgaaccccgacccctgcatataataatgcattgttcttgtcaactgagctatgctcacgggaact 36045237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 270 - 315
Target Start/End: Complemental strand, 41127065 - 41127020
Alignment:
Q  270 ctgcataaattatgcaatgttcttgccaactaagctaaactcacgg 315  Q
    |||||||||||||||||||||| |||||||| |||||| |||||||    
T  41127065 ctgcataaattatgcaatgttcctgccaactgagctaagctcacgg 41127020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 282
Target Start/End: Complemental strand, 7171826 - 7171762
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattat 282  Q
    ||||||||||||||||||| || || |||||| |||||||||||||   || |||||||||||||    
T  7171826 tcacacaattaattgtggagaagtggggtgtctggggttcgaaccccggcccctgcataaattat 7171762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 286
Target Start/End: Complemental strand, 8571891 - 8571823
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaa 286  Q
    |||||||||||| |||||| || |  ||||| ||||||||||||||  ||| |||||||||||||||||    
T  8571891 tcacacaattaaatgtggagaagtagggtgttcggggttcgaaccccgacccctgcataaattatgcaa 8571823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 298
Target Start/End: Original strand, 37553897 - 37553977
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaa 298  Q
    |||||||||||| |||||| || || |||||| || |||||||||    ||||||||||||||||||||||| | ||||||    
T  37553897 tcacacaattaaatgtggataagtggggtgtctggagttcgaacctcggcctctgcataaattatgcaatgtccctgccaa 37553977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 218 - 261
Target Start/End: Complemental strand, 7143512 - 7143469
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaac 261  Q
    ||||||||||||||||| | || |||||||||||||||||||||    
T  7143512 tcacacaattaattgtgaagaagtgaggtgtccggggttcgaac 7143469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 218 - 300
Target Start/End: Original strand, 13462086 - 13462169
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctc-tgcataaattatgcaatgttcttgccaact 300  Q
    |||||||||||||||||||  | |  ||| ||||||||| |||||| |||| | ||||||||||||||||||||| | ||||||    
T  13462086 tcacacaattaattgtggaggagtagggtatccggggtttgaaccccaaccccctgcataaattatgcaatgttcctaccaact 13462169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 218 - 316
Target Start/End: Complemental strand, 15241495 - 15241396
Alignment:
Q  218 tcacacaatt-aattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacggg 316  Q
    |||||||||| ||||||||| || || |||||||| |||||||||||  ||| ||||||| | |||||||| ||| |  ||||| |||||| ||||||||    
T  15241495 tcacacaatttaattgtggagaagtggggtgtccgaggttcgaaccccgacccctgcatataatatgcaatattcctatcaactgagctaagctcacggg 15241396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 244 - 319
Target Start/End: Complemental strand, 22499010 - 22498936
Alignment:
Q  244 ggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacgggaac 319  Q
    ||||||||||||||||||||| |||| |||||| |||||||| ||| ||| |||||| || ||| ||||| |||||    
T  22499010 ggtgtccggggttcgaacccagacct-tgcatatattatgcattgtccttaccaactgagttaagctcaccggaac 22498936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 218 - 316
Target Start/End: Complemental strand, 24477923 - 24477825
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacc-caaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacggg 316  Q
    |||||||||||| |||||| || || |||||||| |||||||||| || ||| ||||||| ||||||||| || | | |||||| |||||| ||||||||    
T  24477923 tcacacaattaaatgtggagaagtggggtgtccgaggttcgaaccacatacc-ctgcatatattatgcaacgtccctaccaactgagctaagctcacggg 24477825  T

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Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 218 - 289
Target Start/End: Original strand, 35580037 - 35580107
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgt 289  Q
    |||||||||||| |||| | ||||||||||| |||||||||| | |  ||| ||||||||||||||||||||    
T  35580037 tcacacaattaaatgtgaagaaatgaggtgttcggggttcgagctccgacc-ctgcataaattatgcaatgt 35580107  T

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Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 317
Target Start/End: Complemental strand, 7462902 - 7462828
Alignment:
Q  243 aggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacggga 317  Q
    |||||||| ||||||||||||  ||| ||||||||||||| |||||| | |  |||||||| ||| |||||||||    
T  7462902 aggtgtccagggttcgaaccccgacccctgcataaattatacaatgtccctatcaactaagttaagctcacggga 7462828  T

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Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 307
Target Start/End: Complemental strand, 10404226 - 10404136
Alignment:
Q  218 tcacacaatt-aattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaa 307  Q
    |||||||||| ||||||||| |||||  |||||||||||||||||||  ||  ||||||| | |||||||| ||| | |||||| ||||||    
T  10404226 tcacacaatttaattgtggagaaatggagtgtccggggttcgaaccccgactcctgcatataatatgcaatattcctaccaactgagctaa 10404136  T

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Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 248 - 318
Target Start/End: Complemental strand, 17666074 - 17666004
Alignment:
Q  248 tccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacgggaa 318  Q
    ||||||||||||||||  ||| ||||||| | |||||||| ||| | |||||| |||||| ||||||||||    
T  17666074 tccggggttcgaaccctgacccctgcatataatatgcaatattcctaccaactgagctaagctcacgggaa 17666004  T

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Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 287
Target Start/End: Original strand, 20707758 - 20707828
Alignment:
Q  218 tcacacaatt-aattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaat 287  Q
    |||||||||| ||||||||| || ||| ||||| ||||||||||||| |||| ||||||| | ||||||||    
T  20707758 tcacacaatttaattgtggagaagtgaagtgtctggggttcgaaccccaacccctgcatatagtatgcaat 20707828  T

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Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 271 - 320
Target Start/End: Complemental strand, 26590749 - 26590700
Alignment:
Q  271 tgcataaattatgcaatgttcttgccaactaagctaaactcacgggaact 320  Q
    |||||| |||||||| ||| ||||| |||||||||||||||||| |||||    
T  26590749 tgcatatattatgcattgtccttgctaactaagctaaactcacgagaact 26590700  T

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Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 263
Target Start/End: Complemental strand, 34208472 - 34208427
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaaccc 263  Q
    ||||||||||||||||||| || || |||||| |||||||||||||    
T  34208472 tcacacaattaattgtggagaagtggggtgtctggggttcgaaccc 34208427  T

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Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 318
Target Start/End: Complemental strand, 35515611 - 35515510
Alignment:
Q  218 tcacacaatt-aattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacggg 316  Q
    |||||||||| ||||||||| || ||| |||||||||||||||||||   |  ||||||| | |||||||| | | | |||||| |||||| ||||||||    
T  35515611 tcacacaatttaattgtggagaagtgaagtgtccggggttcgaaccccggctcctgcatataatatgcaatatccctaccaactgagctaagctcacggg 35515512  T
Q  317 aa 318  Q
    ||    
T  35515511 aa 35515510  T

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Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 289
Target Start/End: Original strand, 37636834 - 37636903
Alignment:
Q  220 acacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgt 289  Q
    |||||||||| |||||| || |||||| | ||||||| |||||  | || ||||||||||||||||||||    
T  37636834 acacaattaaatgtggagaagtgaggtatacggggtttgaacctcagcccctgcataaattatgcaatgt 37636903  T

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Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 313
Target Start/End: Original strand, 38642195 - 38642264
Alignment:
Q  244 ggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcac 313  Q
    |||||||||||||||||| | || | ||||||| | |||| ||| ||| | |||||||||||||||||||    
T  38642195 ggtgtccggggttcgaactccaatccctgcatataatatgtaatattcctaccaactaagctaaactcac 38642264  T

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Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 262
Target Start/End: Original strand, 14804954 - 14804998
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacc 262  Q
    |||||||||||| |||||| || || |||||||||||||||||||    
T  14804954 tcacacaattaaatgtggagaagtggggtgtccggggttcgaacc 14804998  T

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Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 222 - 289
Target Start/End: Original strand, 28758393 - 28758461
Alignment:
Q  222 acaattaattgtggaaaaatgaggtgtccgg-ggttcgaacccaaacctctgcataaattatgcaatgt 289  Q
    |||||||| |||||| || |||||||||||| |||| ||||||  ||  ||||||||||||||||||||    
T  28758393 acaattaaatgtggagaagtgaggtgtccggaggtttgaaccccgactcctgcataaattatgcaatgt 28758461  T

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Target: scaffold0519 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 289
Target Start/End: Original strand, 2934 - 3005
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgt 289  Q
    |||||||||||||||| || || || ||||||||||||||||||||   || ||||||||||||||||||||    
T  2934 tcacacaattaattgtcgagaagtggggtgtccggggttcgaaccccggcccctgcataaattatgcaatgt 3005  T

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Target: scaffold0116 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 303
Target Start/End: Original strand, 16149 - 16234
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaag 303  Q
    |||||||||||| |||| | || |||  |||| ||||||||||||| |||| ||||||||||||| |||||||| ||||| |||||    
T  16149 tcacacaattaaatgtgaagaagtgaaatgtctggggttcgaaccctaacccctgcataaattatacaatgttcctgccagctaag 16234  T

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Target: scaffold0009 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 319
Target Start/End: Original strand, 41625 - 41720
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacggga 317  Q
    ||||||| ||||  ||||| || || ||||||||||||||||||||      |||||||||||||||||||| | |||||| | |||||| |||||||||    
T  41625 tcacacatttaaacgtggagaagtggggtgtccggggttcgaaccc------ctgcataaattatgcaatgtccctgccaattgagctaagctcacggga 41718  T

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Target: scaffold0264 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 218 - 307
Target Start/End: Complemental strand, 20375 - 20286
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaa 307  Q
    |||| ||||||| |||||| || || ||| |||||||||||||||   | |  ||||||||||||||||||| | |||||||||||||||    
T  20375 tcacgcaattaaatgtggataagtggggtatccggggttcgaacctcgatccatgcataaattatgcaatgtccctgccaactaagctaa 20286  T

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Target: scaffold0250 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 218 - 315
Target Start/End: Complemental strand, 15103 - 15006
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacgg 315  Q
    ||||| |||||| |||||| || || |||||  ||||||||||||   ||| |||||||||||||||||||| | | |||||| |||||| |||||||    
T  15103 tcacataattaaatgtggagaagtggggtgtttggggttcgaaccatgacccctgcataaattatgcaatgtccctaccaactgagctaagctcacgg 15006  T

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Target: scaffold0154 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 218 - 289
Target Start/End: Original strand, 28793 - 28864
Alignment:
Q  218 tcacacaattaattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgt 289  Q
    |||||||||||| |||||| || || ||||||||||||||||||||   || ||||||||| |||| |||||    
T  28793 tcacacaattaaatgtggagaagtggggtgtccggggttcgaaccccggcccctgcataaagtatgtaatgt 28864  T

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Target: scaffold0088 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 218 - 316
Target Start/End: Original strand, 10797 - 10896
Alignment:
Q  218 tcacacaatt-aattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacggg 316  Q
    |||||||||| ||||||||| || || ||||||||||||||||||||   || ||||||| | |||||||| | | | |||||| |||||| ||||||||    
T  10797 tcacacaatttaattgtggagaagtggggtgtccggggttcgaaccccggcccctgcatataatatgcaatatccctaccaactgagctaagctcacggg 10896  T

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Target: scaffold0063 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 318
Target Start/End: Complemental strand, 56422 - 56321
Alignment:
Q  218 tcacacaatt-aattgtggaaaaatgaggtgtccggggttcgaacccaaacctctgcataaattatgcaatgttcttgccaactaagctaaactcacggg 316  Q
    |||||||||| ||||||||| |||||| ||||| |||||||||||||   || ||||||| | |||||||| | | |||||| | || ||| ||||||||    
T  56422 tcacacaatttaattgtggagaaatgaagtgtctggggttcgaaccccggcccctgcatataatatgcaatatccctgccaattgagttaagctcacggg 56323  T
Q  317 aa 318  Q
    ||    
T  56322 aa 56321  T

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