View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20684_low_9 (Length: 332)

Name: NF20684_low_9
Description: NF20684
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20684_low_9
NF20684_low_9
[»] chr5 (2 HSPs)
chr5 (52-305)||(18184188-18184441)
chr5 (9-52)||(15044484-15044527)
[»] chr3 (2 HSPs)
chr3 (1-54)||(22173433-22173486)
chr3 (11-52)||(18656228-18656269)
[»] chr6 (7 HSPs)
chr6 (1-52)||(14737815-14737866)
chr6 (1-52)||(14742674-14742725)
chr6 (6-52)||(28184297-28184343)
chr6 (1-52)||(28155809-28155861)
chr6 (1-35)||(6438313-6438347)
chr6 (1-52)||(11856765-11856818)
chr6 (1-52)||(22010935-22010983)
[»] scaffold0355 (2 HSPs)
scaffold0355 (6-52)||(9884-9930)
scaffold0355 (6-51)||(125-170)
[»] chr7 (5 HSPs)
chr7 (1-53)||(31109821-31109873)
chr7 (1-52)||(24024566-24024618)
chr7 (1-54)||(12396708-12396758)
chr7 (1-52)||(4866528-4866576)
chr7 (1-30)||(12406149-12406178)
[»] scaffold0127 (1 HSPs)
scaffold0127 (6-53)||(34193-34240)
[»] chr1 (5 HSPs)
chr1 (6-53)||(41386542-41386589)
chr1 (6-52)||(41398032-41398078)
chr1 (6-52)||(44024117-44024163)
chr1 (6-52)||(25445334-25445382)
chr1 (6-52)||(39445292-39445340)
[»] chr2 (4 HSPs)
chr2 (6-52)||(39812232-39812278)
chr2 (79-116)||(5580682-5580719)
chr2 (6-52)||(32246577-32246625)
chr2 (1-52)||(44312862-44312910)
[»] chr4 (6 HSPs)
chr4 (1-53)||(45348056-45348110)
chr4 (1-53)||(45357535-45357589)
chr4 (11-52)||(5732458-5732499)
chr4 (1-53)||(9229432-9229485)
chr4 (1-52)||(9224645-9224698)
chr4 (6-52)||(3813816-3813864)
[»] chr8 (2 HSPs)
chr8 (6-52)||(39785068-39785114)
chr8 (7-52)||(25328523-25328568)
[»] scaffold0135 (1 HSPs)
scaffold0135 (1-53)||(35300-35353)
[»] scaffold0479 (1 HSPs)
scaffold0479 (6-52)||(13141-13189)
[»] scaffold0464 (1 HSPs)
scaffold0464 (6-52)||(155-203)


Alignment Details
Target: chr5 (Bit Score: 226; Significance: 1e-124; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 52 - 305
Target Start/End: Original strand, 18184188 - 18184441
Alignment:
Q  52 agtctttgtatacttgatccatcattcttaagtgattgattcaaattgaaattagctcttatagttaatctctacttgacatcttcgattcgaaagctcg 151  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  18184188 agtctttgcatacttgatccatcattcttaagtgattgattcaaattgaaattagctcttatagttaatctctacttgacatcttcgattcgaaagctca 18184287  T
Q  152 attcaatgaattcgagttttcttcagatttttactaatttttatgcttgttgttgattttgtggctattatttgttgtagatttggtaaggttttgagat 251  Q
    | |||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||| ||||||||||||||||||||||||| |||||||||    
T  18184288 actcaatgaattcgagttttcttcagatttttactaatttttatgcttattcttgattttgtggttattatttgttgtagatttggtaagattttgagat 18184387  T
Q  252 ttgaacggtttgtgtgtgttttgtttacaactatgagtggttttgtttacactc 305  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18184388 ttgaacggtttgtgtgtgttttgtttacaactatgagtggttttgtttacactc 18184441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 15044527 - 15044484
Alignment:
Q  9 tatttcattggtgtgaaggtttgtttgaaaccggattcacaaca 52  Q
    |||||||||||||||||||||| |||| ||||||||||||||||    
T  15044527 tatttcattggtgtgaaggtttctttggaaccggattcacaaca 15044484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 22173433 - 22173486
Alignment:
Q  1 tcattgtttatttcattggtgtgaaggtttgtttgaaaccggattcacaacagt 54  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  22173433 tcattgtttatttcattggtgtgaagatttgtttgaaaccggattcacaacagt 22173486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 11 - 52
Target Start/End: Complemental strand, 18656269 - 18656228
Alignment:
Q  11 tttcattggtgtgaaggtttgtttgaaaccggattcacaaca 52  Q
    |||||||||||||||||||| |||| ||||||||||||||||    
T  18656269 tttcattggtgtgaaggtttctttggaaccggattcacaaca 18656228  T

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Target: chr6 (Bit Score: 48; Significance: 2e-18; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 14737815 - 14737866
Alignment:
Q  1 tcattgtttatttcattggtgtgaaggtttgtttgaaaccggattcacaaca 52  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  14737815 tcattgtttatttcattggtgtgaaggtttatttgaaaccggattcacaaca 14737866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 14742674 - 14742725
Alignment:
Q  1 tcattgtttatttcattggtgtgaaggtttgtttgaaaccggattcacaaca 52  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  14742674 tcattgtttatttcattggtgtgaaggtttatttgaaaccggattcacaaca 14742725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 28184343 - 28184297
Alignment:
Q  6 gtttatttcattggtgtgaaggtttgtttgaaaccggattcacaaca 52  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  28184343 gtttatttcattggtgtgaaggtttgtttgaaaccggattcacaaca 28184297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 28155809 - 28155861
Alignment:
Q  1 tcattgtttatttcattggtgtgaagg-tttgtttgaaaccggattcacaaca 52  Q
    |||||||||||| |||||||||||||| |||||||  ||||||||||||||||    
T  28155809 tcattgtttattgcattggtgtgaaggttttgtttagaaccggattcacaaca 28155861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 6438347 - 6438313
Alignment:
Q  1 tcattgtttatttcattggtgtgaaggtttgtttg 35  Q
    ||||||||||||||||||||||||||||| |||||    
T  6438347 tcattgtttatttcattggtgtgaaggttcgtttg 6438313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 11856818 - 11856765
Alignment:
Q  1 tcattgtttatttcattggtgtgaagg--tttgtttgaaaccggattcacaaca 52  Q
    |||||||||||||||||||||||||||  ||| |||  ||||||||||||||||    
T  11856818 tcattgtttatttcattggtgtgaaggttttttttttgaaccggattcacaaca 11856765  T

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Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 22010935 - 22010983
Alignment:
Q  1 tcattgtttatttcattggtgtgaaggtttgtttgaaaccggattcacaaca 52  Q
    |||||||||||||||||||||||||| ||  |||| ||||||||||||||||    
T  22010935 tcattgtttatttcattggtgtgaagatt--tttg-aaccggattcacaaca 22010983  T

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Target: scaffold0355 (Bit Score: 47; Significance: 8e-18; HSPs: 2)
Name: scaffold0355
Description:

Target: scaffold0355; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 9884 - 9930
Alignment:
Q  6 gtttatttcattggtgtgaaggtttgtttgaaaccggattcacaaca 52  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  9884 gtttatttcattggtgtgaaggtttgtttgaaaccggattcacaaca 9930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 125 - 170
Alignment:
Q  6 gtttatttcattggtgtgaaggtttgtttgaaaccggattcacaac 51  Q
    |||||||| |||||||||||||||||||||||||||||||||||||    
T  125 gtttatttaattggtgtgaaggtttgtttgaaaccggattcacaac 170  T

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Target: chr7 (Bit Score: 45; Significance: 1e-16; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 31109821 - 31109873
Alignment:
Q  1 tcattgtttatttcattggtgtgaaggtttgtttgaaaccggattcacaacag 53  Q
    |||||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  31109821 tcattgtttatttcattggtgtgaaggtttctttggaaccggattcacaacag 31109873  T

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Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 24024566 - 24024618
Alignment:
Q  1 tcattgtttatttcattggtgtgaagg-tttgtttgaaaccggattcacaaca 52  Q
    ||||||||||||||||||||||||||| ||| |||| ||||||||||||||||    
T  24024566 tcattgtttatttcattggtgtgaaggttttctttggaaccggattcacaaca 24024618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 12396758 - 12396708
Alignment:
Q  1 tcattgtttatttcattggtgtgaaggtttgtttgaaaccggattcacaacagt 54  Q
    |||||||||||||||||||||||||||||  |||| ||||||||||||||||||    
T  12396758 tcattgtttatttcattggtgtgaaggtt--tttg-aaccggattcacaacagt 12396708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 4866576 - 4866528
Alignment:
Q  1 tcattgtttatttcattggtgtgaaggtttgtttgaaaccggattcacaaca 52  Q
    |||||||||||||||||||||||||||||  |||| ||||||||||||||||    
T  4866576 tcattgtttatttcattggtgtgaaggtt--tttg-aaccggattcacaaca 4866528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 12406178 - 12406149
Alignment:
Q  1 tcattgtttatttcattggtgtgaaggttt 30  Q
    ||||||||||||||||||||||||||||||    
T  12406178 tcattgtttatttcattggtgtgaaggttt 12406149  T

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Target: scaffold0127 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 53
Target Start/End: Original strand, 34193 - 34240
Alignment:
Q  6 gtttatttcattggtgtgaaggtttgtttgaaaccggattcacaacag 53  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||    
T  34193 gtttatttcattggtgtgaaggtttctttggaaccggattcacaacag 34240  T

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Target: chr1 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 53
Target Start/End: Complemental strand, 41386589 - 41386542
Alignment:
Q  6 gtttatttcattggtgtgaaggtttgtttgaaaccggattcacaacag 53  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||    
T  41386589 gtttatttcattggtgtgaaggtttctttggaaccggattcacaacag 41386542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 41398078 - 41398032
Alignment:
Q  6 gtttatttcattggtgtgaaggtttgtttgaaaccggattcacaaca 52  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||||    
T  41398078 gtttatttcattggtgtgaaggtttctttggaaccggattcacaaca 41398032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 44024117 - 44024163
Alignment:
Q  6 gtttatttcattggtgtgaaggtttgtttgaaaccggattcacaaca 52  Q
    ||||||||||||||||||||||||| |||| || |||||||||||||    
T  44024117 gtttatttcattggtgtgaaggtttatttggaatcggattcacaaca 44024163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 25445334 - 25445382
Alignment:
Q  6 gtttatttcattggtgtgaaggtttgtttg--aaaccggattcacaaca 52  Q
    |||||||||||||||||||||||| |||||   ||||||||||||||||    
T  25445334 gtttatttcattggtgtgaaggttcgtttgtagaaccggattcacaaca 25445382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 39445340 - 39445292
Alignment:
Q  6 gtttatttcattggtgtgaaggtttgtttg--aaaccggattcacaaca 52  Q
    |||||||||||||||||||||||| |||||   ||||||||||||||||    
T  39445340 gtttatttcattggtgtgaaggttcgtttgtagaaccggattcacaaca 39445292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 39812232 - 39812278
Alignment:
Q  6 gtttatttcattggtgtgaaggtttgtttgaaaccggattcacaaca 52  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||||    
T  39812232 gtttatttcattggtgtgaaggtttctttggaaccggattcacaaca 39812278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 116
Target Start/End: Complemental strand, 5580719 - 5580682
Alignment:
Q  79 ttaagtgattgattcaaattgaaattagctcttatagt 116  Q
    |||||||||| ||||||||||||||||||| |||||||    
T  5580719 ttaagtgattaattcaaattgaaattagcttttatagt 5580682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 32246625 - 32246577
Alignment:
Q  6 gtttatttcattggtgtgaaggtttgtttg--aaaccggattcacaaca 52  Q
    ||||||||||||||||||||||||| ||||   ||||||||||||||||    
T  32246625 gtttatttcattggtgtgaaggtttctttgtagaaccggattcacaaca 32246577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 44312862 - 44312910
Alignment:
Q  1 tcattgtttatttcattggtgtgaaggtttgtttgaaaccggattcacaaca 52  Q
    |||||||||||||||||||||||||| ||  |||| ||||||||||||||||    
T  44312862 tcattgtttatttcattggtgtgaagatt--tttg-aaccggattcacaaca 44312910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 36; Significance: 0.00000000003; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 45348056 - 45348110
Alignment:
Q  1 tcattgtttatttcattggtgtgaaggtttgtttg--aaaccggattcacaacag 53  Q
    |||||||||||||||||||||||||||||| ||||   |||||||||||||||||    
T  45348056 tcattgtttatttcattggtgtgaaggtttctttgtagaaccggattcacaacag 45348110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 45357535 - 45357589
Alignment:
Q  1 tcattgtttatttcattggtgtgaaggtttgtttg--aaaccggattcacaacag 53  Q
    |||||||||||||||||||||||||||||| ||||   |||||||||||||||||    
T  45357535 tcattgtttatttcattggtgtgaaggtttctttgtagaaccggattcacaacag 45357589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 11 - 52
Target Start/End: Complemental strand, 5732499 - 5732458
Alignment:
Q  11 tttcattggtgtgaaggtttgtttgaaaccggattcacaaca 52  Q
    |||||||||||||||||||| |||| ||||||||||||||||    
T  5732499 tttcattggtgtgaaggtttctttggaaccggattcacaaca 5732458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 9229432 - 9229485
Alignment:
Q  1 tcattgtttatttcattggtgtgaagg-tttgtttgaaaccggattcacaacag 53  Q
    ||||||||||||||||||||||||||| ||| |||  |||||||||||||||||    
T  9229432 tcattgtttatttcattggtgtgaaggttttttttttaaccggattcacaacag 9229485  T

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Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 9224645 - 9224698
Alignment:
Q  1 tcattgtttatttcattggtgtgaagg--tttgtttgaaaccggattcacaaca 52  Q
    |||||||||||||||||||||||||||  ||| |||  ||||||||||||||||    
T  9224645 tcattgtttatttcattggtgtgaaggttttttttttgaaccggattcacaaca 9224698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 3813864 - 3813816
Alignment:
Q  6 gtttatttcattggtgtgaaggtttgtttg--aaaccggattcacaaca 52  Q
    ||||||||||||||||||||||||| ||||   ||||||||||||||||    
T  3813864 gtttatttcattggtgtgaaggtttctttgtagaaccggattcacaaca 3813816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 39785068 - 39785114
Alignment:
Q  6 gtttatttcattggtgtgaaggtttgtttgaaaccggattcacaaca 52  Q
    ||||||||||||||||||||||||| |||| |||| |||||||||||    
T  39785068 gtttatttcattggtgtgaaggtttctttggaaccagattcacaaca 39785114  T

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Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 7 - 52
Target Start/End: Original strand, 25328523 - 25328568
Alignment:
Q  7 tttatttcattggtgtgaaggtttgtttgaaaccggattcacaaca 52  Q
    |||||||||||| ||||||||||| |||| ||||||||||||||||    
T  25328523 tttatttcattgttgtgaaggtttctttggaaccggattcacaaca 25328568  T

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Target: scaffold0135 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 35300 - 35353
Alignment:
Q  1 tcattgtttatttcattggtgtgaagg-tttgtttgaaaccggattcacaacag 53  Q
    ||||||||||||||||||||||||||| ||| |||  |||||||||||||||||    
T  35300 tcattgtttatttcattggtgtgaaggttttttttttaaccggattcacaacag 35353  T

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Target: scaffold0479 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0479
Description:

Target: scaffold0479; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 13189 - 13141
Alignment:
Q  6 gtttatttcattggtgtgaaggtttgtttg--aaaccggattcacaaca 52  Q
    |||||||||||||||||||||||| |||||   ||||||||||||||||    
T  13189 gtttatttcattggtgtgaaggttcgtttgtagaaccggattcacaaca 13141  T

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Target: scaffold0464 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 203 - 155
Alignment:
Q  6 gtttatttcattggtgtgaaggtttgtttg--aaaccggattcacaaca 52  Q
    |||||||||||||||||||||||| |||||   ||||||||||||||||    
T  203 gtttatttcattggtgtgaaggttcgtttgtagaaccggattcacaaca 155  T

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