View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20687_high_13 (Length: 225)
Name: NF20687_high_13
Description: NF20687
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20687_high_13 |
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Alignment Details
Target: chr7 (Bit Score: 159; Significance: 8e-85; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 159; E-Value: 8e-85
Query Start/End: Original strand, 20 - 203
Target Start/End: Complemental strand, 9496080 - 9495901
Alignment:
| Q |
20 |
gttaacatcaagccaaagcaccttagataaaaaagaaaattgttaaatttgaaccgtacttgaaccaatcaataaagggagttgatcacattggtaattc |
119 |
Q |
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| T |
9496080 |
gttaacatcaagccaaagcacctta----aaaaagaaaattgttaaatttgaaccgtacttgaaccaatcaataaagggagttgttcacattggtaattc |
9495985 |
T |
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| Q |
120 |
taggataaccaccatagatccttaaaaatggagacataaaccctataggaaagaaaactctgtaaatatatgaattgttccctt |
203 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
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| T |
9495984 |
taggataaccaccatagatccttaaaaatggagacataaaccctataggagagaaaactctgtaaatatatgaattgttccctt |
9495901 |
T |
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