View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20688_high_31 (Length: 255)
Name: NF20688_high_31
Description: NF20688
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20688_high_31 |
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Alignment Details
Target: chr6 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 19 - 244
Target Start/End: Original strand, 23129685 - 23129910
Alignment:
| Q |
19 |
ataagattcataccgccacaataaaaaacaacctcatgttctcattaaaatggtttctcatcaacaataataaatttctagaattcaactttctaatttt |
118 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
23129685 |
ataagattcataccgccacaataaaaaacaacctcatgttctcattaaaatggtttctcatcaacaataataaatttctagaattcaacttcctaatttt |
23129784 |
T |
|
| Q |
119 |
ctttcatcaaaaaatcatatacactaatgagttctaagataaacttctcaagtccaccaatacaatgcaaatttcatatcaagaaatcaaacctcacaag |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
23129785 |
ctttcatcaaaaaatcatatacactaatgagttctaagataaacttctcaagtccaccaatacaatgcaaatttcatatcaagaaatcaaacctcacaag |
23129884 |
T |
|
| Q |
219 |
aaaaaacaccatcatcttctcttcat |
244 |
Q |
| |
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|||||||||||||||||||||||||| |
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| T |
23129885 |
aaaaaacaccatcatcttctcttcat |
23129910 |
T |
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