View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF20688_low_2 (Length: 844)
Name: NF20688_low_2
Description: NF20688
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20688_low_2 |
 | |
|
Alignment Details
Target: chr3 (Bit Score: 744; Significance: 0; HSPs: 32)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 744; E-Value: 0
Query Start/End: Original strand, 1 - 830
Target Start/End: Original strand, 679251 - 680081
Alignment:
| Q |
1 |
tacgcagcattcttctaattctaagaactagaaagnnnnnnnnnn-tgaaaatgaggcatataactatatttcaaactcactataagttttagaaagcta |
99 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
679251 |
tacgcagcattcttctaattctcagaactagaaagaaaaaaaaaaatgaaaatgaggcatataactacatttcaaactcactataagttttagaaagcta |
679350 |
T |
|
| Q |
100 |
aatgttgtgaattctttatacacatgtgaagtatatgatactatgataatcaaaagagcaagtgttgaaagaatctgatcttcacaaaacatatagtgcg |
199 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
679351 |
aatgttgtgaattctttatacacatgtgaagtatatgatactatgataatcaaaagagcaagtgttgaaagaatctgatcttcacaaaacatatagtgcg |
679450 |
T |
|
| Q |
200 |
ctgattttagaactgcagggtttggagaattgaaataatgtgggatgccctctattcttgtccaataatcatcccccaaagtattaacacaaacctcttt |
299 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
679451 |
ctgattttagaactgcagggtttggagaattgaaataatgtgggatgccctctattcttgtccaataatcatcccccaaagtattaacacaaacctcttt |
679550 |
T |
|
| Q |
300 |
ttctgaagaaacaacaacaaccttatctttatcaatgaaatgatcatatccaaagcttagtgatgtccatatgtgattctccaaaggaggaagtaacgta |
399 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || |
|
|
| T |
679551 |
ttctgaagaaacaacaacaaccttatctttatcaatgaaatgatcatatccaaagcttagtgatgtccatatgtgattctccaaaggagggagtaactta |
679650 |
T |
|
| Q |
400 |
tactttctaatggaaggattccacaacaaataagaaccagcttttagcatgcagcaaaagatgccatcgcaagagcacattacgtccacaaagttacctc |
499 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
679651 |
tactttctaacggaaggattccacaacaaataagaaccagcttttagcattcagcaaaagatgccatcgcaagagcacattacgtccacaaagttacctc |
679750 |
T |
|
| Q |
500 |
aaattgtaagaatattaggagggtaaagttgtgtatgtgtaacaacggtagaagttgataaaatcgaggggattggagaatcatactcaactaactcagc |
599 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
679751 |
aaattgtaagaatattaggagggtaaagttgtgtatgtgtaacaacggtagaagttgataaaatcgaggggattggagaatcatactcaactaactcagc |
679850 |
T |
|
| Q |
600 |
caagttgttccaagaggttatcatgaggttgtggcgcttagttgataattgaaggtgcttctttgcgaatgttggatcagcaataagagaatnnnnnnnc |
699 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
679851 |
caagttgttccaagaggttatcatgaggttgtggcgcttagttgataattgaaggtgcttctttgcgaatgttggatcagcaataagagaataaaaaaac |
679950 |
T |
|
| Q |
700 |
ttacagaggcatcgaagttggtaatttgatgggaaacctaccgagaatctcagggaggacatcgaagagaagagtgggaagtggcggcggagatgttatg |
799 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
679951 |
ttacagaggcatcgaagttggtaatttgatgggaaacctaccgagaatctcagggaggacatcgaagagaagagtgggaagtggtggcggagatgttatg |
680050 |
T |
|
| Q |
800 |
gttccagccgtatggacgatgatgtcgtttg |
830 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
680051 |
gttccagccgtatggacgatgatgtcgtttg |
680081 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 474; E-Value: 0
Query Start/End: Original strand, 233 - 830
Target Start/End: Original strand, 747402 - 748004
Alignment:
| Q |
233 |
aataatgtgggatgccctctattcttgtccaataatcatcccccaaagtattaacacaaacctctttttctgaagaaacaacaacaaccttatctttatc |
332 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||| ||||||||||||||| | |||||||||||||||||||||||||||| ||||||| ||||| |
|
|
| T |
747402 |
aataatgtgggatgccctctattcttttccaataatcagcccccaaagtattaaaaaaaacctctttttctgaagaaacaacaacgaccttataattatc |
747501 |
T |
|
| Q |
333 |
aatgaaatgatcatatccaaagcttagtgatgtccatatgtgattctccaaaggaggaagtaacgtatactttctaatggaaggattccacaacaaataa |
432 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
747502 |
aatgaaatgatcatatccaaagcttagtgatgtccatatgtgattctccaaaggaggaagtaacgtatactttctaatggaaggattccacaacaaatat |
747601 |
T |
|
| Q |
433 |
gaaccagcttttagcatgcagcaaaagatgccatcgcaagagcacattacgtccacaaagttacctcaaattgtaagaatattaggagggtaaagttgtg |
532 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| |
|
|
| T |
747602 |
gaaccagcttttagcatgcagcaaaagatgccatcgcaagatcacattacgtccacaaagttacctcgaattgtaagagtattaggagggtaaagttgtg |
747701 |
T |
|
| Q |
533 |
tatgtgtaacaacggtagaagttgataaaatcgaggggattggagaatcatactcaactaactcagccaagttgttccaagaggttatcatgaggttgtg |
632 |
Q |
| |
|
|||||||||||||| ||||||| ||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
747702 |
tatgtgtaacaacgatagaagtagataaaaccgaggggattggagaaacatactcaactaactcagccaagttgttccaagaggttatcatgaggtggtg |
747801 |
T |
|
| Q |
633 |
gcgcttagttgataattgaaggtgcttctttgcgaatgttggatcagcaataagagaatnnnnnnncttacagaggcatcgaagttg-----gtaatttg |
727 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| |
|
|
| T |
747802 |
gcgcttagttgataattgaaggtgcttctttgcgaatgttggatcagcaataagagaataaaaaaacttacagaggcatcgaagttgtacgagtaatttg |
747901 |
T |
|
| Q |
728 |
atgggaaacctaccgagaatctcagggaggacatcgaagagaagagtgggaagtggcggcggagatgttatggttccagccgtatggacgatgatgtcgt |
827 |
Q |
| |
|
||||||| ||||||||||| |||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
747902 |
atgggaagcctaccgagaaactcagggaaaacatcgaatggaagagtgggaagtggcggcggagatgttatggttccagccgtatggacgatgatgtcgt |
748001 |
T |
|
| Q |
828 |
ttg |
830 |
Q |
| |
|
||| |
|
|
| T |
748002 |
ttg |
748004 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 193; E-Value: 1e-104
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 751058 - 751290
Alignment:
| Q |
1 |
tacgcagcattcttctaattctaagaactagaaagnnnnnnnnnntgaaaatgaggcatataactatatttcaaactcactataagttttagaaagctaa |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
751058 |
tacgcagcattcttctaattctaagaactagaaa--aaaaataaatgaaaatgaggcatagaactatatttcaaactcactataagttttagaaagctaa |
751155 |
T |
|
| Q |
101 |
atgttgtgaattctttatacacatgtgaagtatatgatactatgataatcaaaagagcaagtgttgaaagaatctgatcttcacaaaacatatagtgcgc |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
751156 |
atgttgtgaattctttatacacatgtgaagtatatgatactatgataatcaaaagagcaagtgttgaaagaatctgatcttcacaaaacatatagtgcgc |
751255 |
T |
|
| Q |
201 |
tgattttagaactgcagggtttggagaattgaaat |
235 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |
|
|
| T |
751256 |
tgattttagaactgcagggtttggagaattgaaat |
751290 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 128; E-Value: 1e-65
Query Start/End: Original strand, 237 - 691
Target Start/End: Original strand, 9594898 - 9595361
Alignment:
| Q |
237 |
atgtgggatgccctctattcttgtccaataatcatcccccaaagtattaacacaaacctctttttctgaagaaacaacaacaaccttatctttatcaatg |
336 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||| ||||||||||| |||| |||| || |||| |||| || | ||| ||||||| ||||||||| |
|
|
| T |
9594898 |
atgtgggatgtcctctattcttgtccaataatcagtccccaaagtataaacaaaaacatcatttttggaagcaaaatcaatgaccttatacttatcaatg |
9594997 |
T |
|
| Q |
337 |
aaatgatcatatccaaagcttag----------tgatgtccatatgt-gattctccaaaggaggaagtaacgtatactttctaatggaaggattccacaa |
425 |
Q |
| |
|
||||||||||| || ||||||| | ||||| | || || | ||||||||||| | |||| || | |||||||||||||| |||||||| |
|
|
| T |
9594998 |
aaatgatcatacccgaagcttatgaaaaaagtatcatgtc--tgcgtcgaatttccaaaggaggcaataacttaaattttctaatggaagggttccacaa |
9595095 |
T |
|
| Q |
426 |
caaataagaaccagcttttagcatgcagcaaaagatgccatcgcaagagcacattacgtccacaaagttacctcaaattgtaagaatattaggagggtaa |
525 |
Q |
| |
|
| ||||||||||| || || | || ||||| ||||||||||||||||||| ||||||||| | ||| || | |||| ||| |||||||||||||| |
|
|
| T |
9595096 |
aacataagaaccaggcttgagaaaacaacaaaaaatgccatcgcaagagcacaatacgtccacgtatttagatccatttgtgagagtattaggagggtaa |
9595195 |
T |
|
| Q |
526 |
agttgtgtatgtgtaacaacggtagaagttgataaaatcgaggggattggagaatcatactcaactaactcagccaagttgttccaagaggttatcatga |
625 |
Q |
| |
|
|||||||| |||||||||| ||||||||| || |||| ||| |||||||||||||||| |||||| ||||||||||||||| ||||| |||||||| |
|
|
| T |
9595196 |
agttgtgtctgtgtaacaatggtagaagtagaaaaaactgagtggattggagaatcatatagaactaaatcagccaagttgttcatagaggctatcatga |
9595295 |
T |
|
| Q |
626 |
ggttgtggcgcttagttgataattgaaggtgcttctttgcgaatgttggatcagcaataagagaat |
691 |
Q |
| |
|
||| ||||||||| ||||| ||||||||||| |||||||| ||| ||||||||| ||||||||||| |
|
|
| T |
9595296 |
ggtggtggcgctttgttgacaattgaaggtgattctttgcaaattttggatcagaaataagagaat |
9595361 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 242 - 435
Target Start/End: Complemental strand, 2501944 - 2501751
Alignment:
| Q |
242 |
ggatgccctctattcttgtccaataatcatcccccaaagtattaacacaaacctctttttctgaagaaacaacaacaaccttatctttatcaatgaaatg |
341 |
Q |
| |
|
||||| ||||||| || ||||||||||| ||||||||||||||| | ||| || ||||| ||||||||||| ||||||| |||||||||||||| |
|
|
| T |
2501944 |
ggatgtcctctatctttctccaataatcagtccccaaagtattaaccctaacttcattttcgtcagaaacaacaatgaccttataattatcaatgaaatg |
2501845 |
T |
|
| Q |
342 |
atcatatccaaagcttagtgatgtccatatgtgattctccaaaggaggaagtaacgtatactttctaatggaaggattccacaacaaataagaa |
435 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||||||| | |||| || ||||| |||||||||| |||||||| ||||||||| |
|
|
| T |
2501844 |
atcatatccaaagcttagtgatgtccattcgtgattctccaaaggaggcaataacttaaactttgtaatggaagggttccacaagaaataagaa |
2501751 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 240 - 780
Target Start/End: Complemental strand, 2491871 - 2491317
Alignment:
| Q |
240 |
tgggatgccctctattcttgtccaataatcatcccccaaagtattaacacaaacctctttttctgaagaaacaacaacaaccttatctttatcaatgaaa |
339 |
Q |
| |
|
||||||| ||| |||||||||||||||||| ||||||||||| ||||| ||| || ||||| ||||||||| ||| ||||||| | |||||||||| |
|
|
| T |
2491871 |
tgggatgtccttgattcttgtccaataatcagtccccaaagtataaacactaacttcattttcggaagaaacaccaatgaccttataatcatcaatgaaa |
2491772 |
T |
|
| Q |
340 |
tgatcatatccaaagcttagtg-------atgtccatatgtgattctccaaaggaggaagtaacgtatactttctaatggaaggattccacaacaaataa |
432 |
Q |
| |
|
|||||||| |||||||||| | |||||| || ||| ||||||||||| | |||| || |||||||||||||||| ||||||| ||| || |
|
|
| T |
2491771 |
tgatcatacccaaagcttatttgaaaaacatgtccgcgtga-attttccaaaggaggcaataacttaaactttctaatggaagggttccacagaaaaaaa |
2491673 |
T |
|
| Q |
433 |
gaaccagcttttagcat---gcagcaaaagatgccatcgcaagagcacattacgtccacaaagttacctcaaattgtaagaatattaggagggtaaagtt |
529 |
Q |
| |
|
||| | | || |||| ||| |||||||||||||| ||| ||||| |||| || ||| ||| || | |||| ||| || ||||||||||||||| |
|
|
| T |
2491672 |
gaaacgccattaagcaccacgcaacaaaagatgccatcacaatagcaccttaccaacataaatttatgtccatttgtgagattagtaggagggtaaagtt |
2491573 |
T |
|
| Q |
530 |
gtgtatgtgtaacaacggtagaagttgataaaatcgaggggattggagaatcatactcaactaactcagccaagttgttccaagaggttatcatgaggtt |
629 |
Q |
| |
|
| || ||||||| |||||||||||| || |||| |||||| ||||| ||||||| | ||| |||||| |||||||||| ||||||| |||||||| |
|
|
| T |
2491572 |
gggtctgtgtaataacggtagaagtagaaaaaagcgagggtattggggaatcatgatgaaccaactcacccaagttgttttttgaggttaccatgaggtg |
2491473 |
T |
|
| Q |
630 |
gtggcgcttagttgataattgaaggtgcttctttgcgaatgttggatcagcaataagagaatnnnnnnncttacagaggcatcgaagttg-----gtaat |
724 |
Q |
| |
|
||||||||| ||||| |||||||| ||||| ||||||||| | ||||||| ||| | ||||| |||||| ||||||||||| || ||||| |
|
|
| T |
2491472 |
gtggcgctttgttgacaattgaagatgcttttttgcgaatttaggatcagaaattaaagaattgaaaaacttacaaaggcatcgaagctgtaccagtaat |
2491373 |
T |
|
| Q |
725 |
ttgatgggaaacctaccgagaatctcagggaggacatcgaagagaagagtgggaag |
780 |
Q |
| |
|
|| | |||| ||||| ||||||||||| |||||||| || ||||||| ||||| |
|
|
| T |
2491372 |
ttcaccggaagcctacacagaatctcaggcaggacatcaaaaggaagagttggaag |
2491317 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 252 - 581
Target Start/End: Original strand, 2659420 - 2659752
Alignment:
| Q |
252 |
tattcttgtccaataatcatcccccaaagtattaacacaaacctctttttctgaagaaacaacaacaaccttatctttatcaatgaaatgatcatatcca |
351 |
Q |
| |
|
||||||| ||||||||||| ||||||||||||||||| || | |||||| ||||| |||||||||||| |||||||| ||||||||||||||| |
|
|
| T |
2659420 |
tattcttctccaataatcagtccccaaagtattaacactaatcacttttttgaaagaatgggcaacaaccttataattatcaataaaatgatcatatcca |
2659519 |
T |
|
| Q |
352 |
aagcttagtgatgtccatatgtgattctccaaaggaggaagtaacgtatactttctaatggaaggattccacaacaaataagaaccagcttttagcatgc |
451 |
Q |
| |
|
||||||||| ||| |||| |||||||| ||||||||| | |||| || |||||||||||||||| ||||| || |||||||||||| || ||| | | |
|
|
| T |
2659520 |
aagcttagtaatgaccatttgtgattccgcaaaggaggcaataacttaaactttctaatggaagggttccataagaaataagaaccattattgagcttac |
2659619 |
T |
|
| Q |
452 |
agcaaaagatgccatcgcaagagc---acattacgtccacaaagttacctcaaattgtaagaatattaggagggtaaagttgtgtatgtgtaacaacggt |
548 |
Q |
| |
|
||||| |||||||||||||||| ||| | ||| | ||| | || | |||| ||| |||||||| |||||||||||| |||||||||||||| |
|
|
| T |
2659620 |
cacaaaatatgccatcgcaagagctcatcatcaggtcgatgcagtgatgtccatttgtgagagtattaggaatgtaaagttgtgtttgtgtaacaacggt |
2659719 |
T |
|
| Q |
549 |
agaagttgataaaatcgaggggattggagaatc |
581 |
Q |
| |
|
|||||| || ||||| || |||||||||||||| |
|
|
| T |
2659720 |
agaagtagagaaaattgaagggattggagaatc |
2659752 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 240 - 781
Target Start/End: Complemental strand, 2474895 - 2474346
Alignment:
| Q |
240 |
tgggatgccctctattcttgtccaataatca-tcccccaaagtattaacacaaacctctttttctgaagaaacaacaacaaccttatctttatcaatgaa |
338 |
Q |
| |
|
||||||| ||||||||||||||||||||||| ||| ||||||||||||| ||| || |||| ||||||| |||| |||| | ||||||||||| |
|
|
| T |
2474895 |
tgggatgtcctctattcttgtccaataatcagtccttaaaagtattaacactaacttcatttttggaagaaaatacaatggccttgtaattatcaatgaa |
2474796 |
T |
|
| Q |
339 |
atgatcatatccaaagct--tagtga--tgtcca-tatgt-gattctccaaaggaggaagtaacgtatactttctaatggaaggattccacaacaaataa |
432 |
Q |
| |
|
|||||||||||||||||| || | | | ||| | ||| | || ||||||||||| | |||| || | |||| ||||||||| |||||||| |||||| |
|
|
| T |
2474795 |
atgatcatatccaaagcttatactcaagggaccattttgtggtttttccaaaggaggcaataacttaaattttccaatggaagggttccacaa-aaataa |
2474697 |
T |
|
| Q |
433 |
gaaccagcttttagcatgcagcaaaagatgccatcgcaagagcacattacgtccacaaagttacctcaaattgtaagaatattaggagggtaaagttgtg |
532 |
Q |
| |
|
|| ||| |||| ||| ||| ||||||||||||||| |||||||||| ||| | ||||| || || | | | | ||||||||||||||||||||| |
|
|
| T |
2474696 |
gagccatctttgagcgtgccgcaaaagatgccatcacaagagcacaacacgaaggcgtagttatgtccaagtttgatactattaggagggtaaagttgtg |
2474597 |
T |
|
| Q |
533 |
tatgtgtaacaacggtagaagttgataaaatcgaggggattggagaatcatactcaactaactcagccaagttgttccaagaggttatcatgaggttgtg |
632 |
Q |
| |
|
| ||| | || | |||| | || |||| |||||| ||||| |||||||||| ||| ||||| | |||| ||| | ||| |||| |||||||| ||| |
|
|
| T |
2474596 |
tctgt---ataatgatagacttagaaaaaagcgagggtattggggaatcatactgaacgtactcacctaagtagttgctagatgttaccatgaggtggtg |
2474500 |
T |
|
| Q |
633 |
gcgcttagttgataattgaaggtgcttctttgcgaatgttggatcagcaataagagaatnnnnnnncttacagaggcatcgaagtt-----ggtaatttg |
727 |
Q |
| |
|
|||||| |||||||||||||||| |||||||||||| | |||| | ||| | ||||| |||||||||||| ||||| | ||||||||| |
|
|
| T |
2474499 |
gcgcttgtttgataattgaaggtgtttctttgcgaatctgggattggaaattaaagaattaaagaacttacagaggcaccgaagctgtacaggtaatttg |
2474400 |
T |
|
| Q |
728 |
atgggaaacctaccgagaatctcagggaggacatcgaagagaagagtgggaagt |
781 |
Q |
| |
|
| ||||| ||||| |||||||||||| |||| ||| ||| |||||||||||||| |
|
|
| T |
2474399 |
acgggaagcctacagagaatctcaggcaggagatcaaagggaagagtgggaagt |
2474346 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 503 - 665
Target Start/End: Original strand, 9562507 - 9562672
Alignment:
| Q |
503 |
ttgtaagaatattaggagggtaaagttgtgtatgtgtaacaacggtagaagttgataaaatcgaggggattggagaatcatactcaactaactcagc--- |
599 |
Q |
| |
|
|||| ||||||||||||| |||||||||||| ||||||||| |||||||||| || |||| | |||||||||| |||||| || ||| |||||| | |
|
|
| T |
9562507 |
ttgtgagaatattaggagcgtaaagttgtgtctgtgtaacagcggtagaagtagaaaaaaccaaggggattgggaaatcatgctgaacaaactcaccacg |
9562606 |
T |
|
| Q |
600 |
caagttgttccaagaggttatcatgaggttgtggcgcttagttgataattgaaggtgcttctttgc |
665 |
Q |
| |
|
| | ||||||||||||||| || ||||| ||||||||||||||| |||||||||||||||||||| |
|
|
| T |
9562607 |
cgaaatgttccaagaggttaccaagaggtggtggcgcttagttgacaattgaaggtgcttctttgc |
9562672 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 513 - 780
Target Start/End: Complemental strand, 2476159 - 2475887
Alignment:
| Q |
513 |
attaggagggtaaagttgtgtatgtgtaacaacggtagaagttgataaaatcgaggggattggagaatcatactcaactaactcagccaagttgttccaa |
612 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||| ||||| || || | || |||||||| ||||||||| |||||||||| | |||| | | |
|
|
| T |
2476159 |
attaggagggtaaagttgtgtctgtgtaacaacggttgaagtagaaaatacggatgggattggcgaatcatacagaactaactcacgtgatatgttacga |
2476060 |
T |
|
| Q |
613 |
gaggttatcatgaggttgtggcgcttagttgataattgaaggtgcttctttgcgaatgttggatcagcaataagagaatnnnnnnncttacagaggcatc |
712 |
Q |
| |
|
| || |||||||| ||||||||| ||||| ||||||||||| |||||||||||| | ||||||| ||||||||||| |||||| ||||| | |
|
|
| T |
2476059 |
cattttcgcatgaggtggtggcgctttgttgacaattgaaggtgtttctttgcgaatttaggatcagaaataagagaattgaaaaacttacaaaggcacc |
2475960 |
T |
|
| Q |
713 |
gaagttg-----gtaatttgatgggaaacctaccgagaatctcagggaggacatcgaagagaagagtgggaag |
780 |
Q |
| |
|
|||| || ||||||||| || |||||| ||||||||||| |||||||| ||| ||||||||||||| |
|
|
| T |
2475959 |
gaagctgtacgagtaatttgacaggtaacctaaacagaatctcaggcaggacatcaaagggaagagtgggaag |
2475887 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 240 - 356
Target Start/End: Original strand, 7324687 - 7324803
Alignment:
| Q |
240 |
tgggatgccctctattcttgtccaataatcatcccccaaagtattaacacaaacctctttttctgaagaaacaacaacaaccttatctttatcaatgaaa |
339 |
Q |
| |
|
||||||| ||||||||||||||||||||||| ||||||||||||||||| ||| | |||| ||||||||||||| ||||||| |||||||| ||| |
|
|
| T |
7324687 |
tgggatgtcctctattcttgtccaataatcagtccccaaagtattaacactaactttatttttggaagaaacaacaatgaccttatagttatcaattaaa |
7324786 |
T |
|
| Q |
340 |
tgatcatatccaaagct |
356 |
Q |
| |
|
||||| || |||||||| |
|
|
| T |
7324787 |
tgatcgtacccaaagct |
7324803 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 454 - 566
Target Start/End: Original strand, 9566320 - 9566432
Alignment:
| Q |
454 |
caaaagatgccatcgcaagagcacattacgtccacaaagttacctcaaattgtaagaatattaggagggtaaagttgtgtatgtgtaacaacggtagaag |
553 |
Q |
| |
|
|||||||||||||||||||||||| ||| ||||||| |||| | || |||| | | | |||| ||||||||||||||||| ||||||| ||| ||||||| |
|
|
| T |
9566320 |
caaaagatgccatcgcaagagcacgttaagtccacatagttgcgtctaattctgatactattgggagggtaaagttgtgtctgtgtaaaaaccgtagaag |
9566419 |
T |
|
| Q |
554 |
ttgataaaatcga |
566 |
Q |
| |
|
| ||||||||||| |
|
|
| T |
9566420 |
tagataaaatcga |
9566432 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 252 - 435
Target Start/End: Original strand, 2644633 - 2644819
Alignment:
| Q |
252 |
tattcttgtccaataatcatcccccaaagtattaacacaaacctctttttctgaagaaacaacaacaaccttatctttatcaatgaaatgatcatatcca |
351 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||| | ||| || ||||| |||||||| || ||||||| ||||||| ||| |||||||||||| |
|
|
| T |
2644633 |
tattcttgtccaataatcagtccccaaagtattaaccctaacttcattttcgtcagaaacaataatgaccttataattatcaacgaagtgatcatatcca |
2644732 |
T |
|
| Q |
352 |
aagcttagtgatgtccata----tgtgattctccaaaggaggaagtaacgtatactttctaatggaaggattccacaacaaataagaa |
435 |
Q |
| |
|
|||||||||| | | ||| ||||| | ||||||||||| | |||| || ||||||||| |||||| |||||||| ||||||||| |
|
|
| T |
2644733 |
aagcttagtgttct-gataaaattgtgactttccaaaggaggcaataacttaaactttctaacggaagggttccacaagaaataagaa |
2644819 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 616 - 764
Target Start/End: Original strand, 755292 - 755445
Alignment:
| Q |
616 |
gttatcatgaggttgtggcgcttagttgataattgaaggtgcttctttgcgaatgttggatcagcaataagagaatnnnnnnncttacagaggcatcgaa |
715 |
Q |
| |
|
|||| |||||||| ||||||||| ||||| |||||||| || || ||||||||| ||||||||| ||||||||||| |||||||||||| || | |
|
|
| T |
755292 |
gttaacatgaggtggtggcgctttgttgacaattgaagatgtttttttgcgaattttggatcagaaataagagaattgaaagacttacagaggcaccgca |
755391 |
T |
|
| Q |
716 |
gttg-----gtaatttgatgggaaacctaccgagaatctcagggaggacatcga |
764 |
Q |
| |
|
| || ||||||||||||||| ||||| ||||||||||| |||||||||| |
|
|
| T |
755392 |
gctgtccgagtaatttgatgggaagcctacaaagaatctcaggcaggacatcga |
755445 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 240 - 358
Target Start/End: Original strand, 9566094 - 9566212
Alignment:
| Q |
240 |
tgggatgccctctattcttgtccaataatcatcccccaaagtattaacacaaacctctttttctgaagaaacaacaacaaccttatctttatcaatgaaa |
339 |
Q |
| |
|
||||||| ||||||||||||||||||||||| ||||||||||| ||||| ||| || |||| || ||||||| || | ||||| |||||||||||| |
|
|
| T |
9566094 |
tgggatgtcctctattcttgtccaataatcagtccccaaagtataaacactaacttcattttttgtagaaacagaaatgagcttataattatcaatgaaa |
9566193 |
T |
|
| Q |
340 |
tgatcatatccaaagctta |
358 |
Q |
| |
|
|||||||| ||||| |||| |
|
|
| T |
9566194 |
tgatcatacccaaaactta |
9566212 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 249 - 358
Target Start/End: Original strand, 7443269 - 7443378
Alignment:
| Q |
249 |
ctctattcttgtccaataatcatcccccaaagtattaacacaaacctctttttctgaagaaacaacaacaaccttatctttatcaatgaaatgatcatat |
348 |
Q |
| |
|
|||||||||| ||||||||||| |||||||| ||||||| ||||||| | || ||||||| | ||||||| |||| |||||||||||||||||||| |
|
|
| T |
7443269 |
ctctattcttctccaataatcagtccccaaagcattaacaaaaacctcatatttggaagaaatagcaacaactttataattatcaatgaaatgatcatac |
7443368 |
T |
|
| Q |
349 |
ccaaagctta |
358 |
Q |
| |
|
||||| |||| |
|
|
| T |
7443369 |
ccaaaactta |
7443378 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 403 - 483
Target Start/End: Complemental strand, 2635294 - 2635214
Alignment:
| Q |
403 |
tttctaatggaaggattccacaacaaataagaaccagcttttagcatgcagcaaaagatgccatcgcaagagcacattacg |
483 |
Q |
| |
|
|||||||||||||| ||||||| ||||||||||||||||| |||| | || |||||||||||||||||||||| ||||| |
|
|
| T |
2635294 |
tttctaatggaagggttccacagaaaataagaaccagctttgagcacaccgctaaagatgccatcgcaagagcacgttacg |
2635214 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 616 - 780
Target Start/End: Original strand, 7334931 - 7335100
Alignment:
| Q |
616 |
gttatcatgaggttgtggcgcttagttgataattgaaggtgcttctttgcgaatgttggatcagcaataagagaatnnnnnnncttacagaggcatcgaa |
715 |
Q |
| |
|
|||| |||||||| ||||||||| ||||| |||||||||||||||||||||||| ||||||||| |||| ||||| ||||||||| ||||||| |
|
|
| T |
7334931 |
gttaccatgaggtggtggcgctttgttgacaattgaaggtgcttctttgcgaattttggatcagagataacagaattaaagaacttacagagacatcgaa |
7335030 |
T |
|
| Q |
716 |
gttg-----gtaatttgatgggaaacctaccgagaatctcagggaggacatcgaagagaagagtgggaag |
780 |
Q |
| |
|
| || ||||||| | |||| ||||| ||||||||||| |||||||| || ||||||| ||||| |
|
|
| T |
7335031 |
gctgtacgagtaatttcaccggaagcctacacagaatctcaggcaggacatcaaacggaagagtaggaag |
7335100 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 616 - 780
Target Start/End: Original strand, 9566482 - 9566651
Alignment:
| Q |
616 |
gttatcatgaggttgtggcgcttagttgataattgaaggtgcttctttgcgaatgttggatcagcaataagagaatnnnnnnncttacagaggcatcgaa |
715 |
Q |
| |
|
|||| |||||||| |||||||| ||||| |||||||| || || ||||||||| ||||||||| ||||||||||| ||| |||||||| |||| |
|
|
| T |
9566482 |
gttaacatgaggtgatggcgctttgttgacaattgaagatgtttttttgcgaattttggatcagaaataagagaattgaaggacttgcagaggcaccgaa |
9566581 |
T |
|
| Q |
716 |
gttg-----gtaatttgatgggaaacctaccgagaatctcagggaggacatcgaagagaagagtgggaag |
780 |
Q |
| |
|
| || ||||||| ||||||| ||||| ||||||||||| | |||||||||| ||||||| ||||| |
|
|
| T |
9566582 |
gctgtccgagtaatttcatgggaagcctacaaagaatctcaggcaagacatcgaagggaagagtaggaag |
9566651 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 240 - 347
Target Start/End: Original strand, 9562235 - 9562342
Alignment:
| Q |
240 |
tgggatgccctctattcttgtccaataatcatcccccaaagtattaacacaaacctctttttctgaagaaacaacaacaaccttatctttatcaatgaaa |
339 |
Q |
| |
|
||||||| |||||||||| ||||||||||| ||||||||||| ||||| ||| || |||| | ||||||||||| ||||||| |||||||||||| |
|
|
| T |
9562235 |
tgggatgtcctctattctcttccaataatcagtccccaaagtataaacactaacttcatttttggtagaaacaacaatgaccttataattatcaatgaaa |
9562334 |
T |
|
| Q |
340 |
tgatcata |
347 |
Q |
| |
|
|||||||| |
|
|
| T |
9562335 |
tgatcata |
9562342 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 248 - 358
Target Start/End: Original strand, 754888 - 754998
Alignment:
| Q |
248 |
cctctattcttgtccaataatcatcccccaaagtattaacacaaacctctttttctgaagaaacaacaacaaccttatctttatcaatgaaatgatcata |
347 |
Q |
| |
|
||||||||||||||||||||||| |||||| |||| ||||||||| || |||| || ||||||| || ||||| | |||| ||||||||||||||| |
|
|
| T |
754888 |
cctctattcttgtccaataatcagtccccaatgtataaacacaaacttcattttttgtagaaacagaaatgaccttgtaattatgaatgaaatgatcata |
754987 |
T |
|
| Q |
348 |
tccaaagctta |
358 |
Q |
| |
|
|||||||||| |
|
|
| T |
754988 |
cccaaagctta |
754998 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 73 - 233
Target Start/End: Complemental strand, 2632659 - 2632504
Alignment:
| Q |
73 |
aaactcactataagttttagaaagctaaatgttgtgaattctttatacacatgtgaagtatatgatactatgataatcaaaagagcaagtgttgaaagaa |
172 |
Q |
| |
|
||||||||||||||||| | |||||||||| | ||||| || | ||||||||||||| ||||| |||||||||| ||||| | |||| |||||||| |
|
|
| T |
2632659 |
aaactcactataagtttcaaaaagctaaatat---gaattattcacacacatgtgaagtgtatga--ctatgataatacaaagaacgagtggtgaaagaa |
2632565 |
T |
|
| Q |
173 |
t----ctgatcttcacaaaacatatagtgcgctgattttagaactgcagggtttggagaattgaa |
233 |
Q |
| |
|
||||||||||||||||| || |||||||||| |||||||||||||||||||||||| |
|
|
| T |
2632564 |
aagacctgatcttcacaaaacaa----tgtgctgattttaaaactgcagggtttggagaattgaa |
2632504 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 513 - 585
Target Start/End: Complemental strand, 2630843 - 2630771
Alignment:
| Q |
513 |
attaggagggtaaagttgtgtatgtgtaacaacggtagaagttgataaaatcgaggggattggagaatcatac |
585 |
Q |
| |
|
||||||||||||||||||||| |||| ||||| ||| ||||| || |||| ||| |||||||||||||||||| |
|
|
| T |
2630843 |
attaggagggtaaagttgtgtttgtgcaacaatggttgaagtagaaaaaagcgaagggattggagaatcatac |
2630771 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 516 - 780
Target Start/End: Original strand, 7443554 - 7443823
Alignment:
| Q |
516 |
aggagggtaaagttgtgtatgtgtaacaacggtagaagttgataaaatcgaggggattggagaatcatactcaactaactcagccaagttgttccaagag |
615 |
Q |
| |
|
|||||||| ||||||||| ||||||||| |||||||| || || | ||| |||||||||||||||| ||| || ||| |||||||| |||| |
|
|
| T |
7443554 |
aggagggtcaagttgtgtttgtgtaacagacgtagaagtagaaaacaccgatgggattggagaatcatgtaaaacaaaatcatgtctgttgttcctagag |
7443653 |
T |
|
| Q |
616 |
gttatcatgaggttgtggcgcttagttgataattgaaggtgcttctttgcgaatgttggatcagcaataagagaatnnnnnnncttacagaggcatcgaa |
715 |
Q |
| |
|
|||| ||||||| ||| |||| | ||| ||||||| ||||||||| ||||| | ||||||| ||| | ||||| |||||||||||| |||| |
|
|
| T |
7443654 |
gttaccatgaggcggtgatgcttggctgaaaattgaaagtgcttcttggcgaaattgggatcagaaattaaagaattgaagaacttacagaggcaccgaa |
7443753 |
T |
|
| Q |
716 |
gttg-----gtaatttgatgggaaacctaccgagaatctcagggaggacatcgaagagaagagtgggaag |
780 |
Q |
| |
|
|||| ||||||| | |||| ||| | ||||||||||||||||| ||||||| ||||||||||||| |
|
|
| T |
7443754 |
gttgtatgagtaatttcacaggaagcctgcagagaatctcagggaggagatcgaagggaagagtgggaag |
7443823 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 260 - 358
Target Start/End: Original strand, 7334560 - 7334658
Alignment:
| Q |
260 |
tccaataatcatcccccaaagtattaacacaaacctctttttctgaagaaacaacaacaaccttatctttatcaatgaaatgatcatatccaaagctta |
358 |
Q |
| |
|
||||||||||| |||||||||| ||||| ||| | ||||| | ||||||| |||| ||||||| ||||||||||||||||||||||| ||||||| |
|
|
| T |
7334560 |
tccaataatcagttcccaaagtataaacactaacttttttttttacagaaacagcaacgaccttataattatcaatgaaatgatcatatccgaagctta |
7334658 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 233 - 358
Target Start/End: Complemental strand, 2631138 - 2631013
Alignment:
| Q |
233 |
aataatgtgggatgccctctattcttgtccaataatcatcccccaaagtattaacacaaacctctttttctgaagaaacaacaacaaccttatctttatc |
332 |
Q |
| |
|
|||||| ||||||| | ||||||||| ||||||||||| ||| ||||||| || | |||| || |||| ||||||||| ||| ||||||| ||||| |
|
|
| T |
2631138 |
aataatatgggatgtcgtctattcttttccaataatcagtccctaaagtataaagaaaaacttcatttttggaagaaacagcaatgaccttatacttatc |
2631039 |
T |
|
| Q |
333 |
aatgaaatgatcatatccaaagctta |
358 |
Q |
| |
|
||||||| |||||| |||||||||| |
|
|
| T |
2631038 |
aatgaaacaatcatacccaaagctta |
2631013 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 624 - 780
Target Start/End: Original strand, 7325065 - 7325226
Alignment:
| Q |
624 |
gaggttgtggcgcttagttgataattgaaggtgcttctttgcgaatgttggatcagcaataagagaatnnnnnnncttacagaggcatcgaagttg---- |
719 |
Q |
| |
|
||||| |||||||||||||||||||||||| || ||||||||||| || ||||||| ||| | ||||| |||||||||||| ||||| || |
|
|
| T |
7325065 |
gaggtggtggcgcttagttgataattgaagatgtttctttgcgaaagtgggatcagaaattaaagaattgaagaacttacagaggcaccgaagctgtatg |
7325164 |
T |
|
| Q |
720 |
-gtaatttgatgggaaacctaccgagaatctcagggaggacatcgaagagaagagtgggaag |
780 |
Q |
| |
|
||||||| | |||| ||| | |||||||||||| | ||||||||| ||||||| ||||| |
|
|
| T |
7325165 |
agtaatttcacaggaagcctgcagagaatctcaggtaagacatcgaaaggaagagttggaag |
7325226 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 512 - 582
Target Start/End: Original strand, 755176 - 755246
Alignment:
| Q |
512 |
tattaggagggtaaagttgtgtatgtgtaacaacggtagaagttgataaaatcgaggggattggagaatca |
582 |
Q |
| |
|
|||| ||||||||||||||||| ||||||| ||| |||||||| || ||||| || |||||||| |||||| |
|
|
| T |
755176 |
tattgggagggtaaagttgtgtctgtgtaaaaacagtagaagtagaaaaaatggatgggattggggaatca |
755246 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 240 - 358
Target Start/End: Complemental strand, 2476426 - 2476308
Alignment:
| Q |
240 |
tgggatgccctctattcttgtccaataatcatcccccaaagtattaacacaaacctctttttctgaagaaacaacaacaaccttatctttatcaatgaaa |
339 |
Q |
| |
|
||||||| ||| |||||||||||||||||| ||||||||||||||||| ||| || |||| |||||||| || ||||| | |||||||| || |
|
|
| T |
2476426 |
tgggatgtcctgcattcttgtccaataatcagtccccaaagtattaacactaacttcgtttttgtcagaaacaagaatgaccttgtagttatcaatagaa |
2476327 |
T |
|
| Q |
340 |
tgatcatatccaaagctta |
358 |
Q |
| |
|
|||||||| |||||||||| |
|
|
| T |
2476326 |
tgatcatacccaaagctta |
2476308 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 758 - 802
Target Start/End: Complemental strand, 2634905 - 2634861
Alignment:
| Q |
758 |
acatcgaagagaagagtgggaagtggcggcggagatgttatggtt |
802 |
Q |
| |
|
|||||||| ||||||| ||||||||||||||||||||||||||| |
|
|
| T |
2634905 |
acatcgaacggaagagtcggaagtggcggcggagatgttatggtt |
2634861 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 373 - 435
Target Start/End: Complemental strand, 2630971 - 2630909
Alignment:
| Q |
373 |
tgattctccaaaggaggaagtaacgtatactttctaatggaaggattccacaacaaataagaa |
435 |
Q |
| |
|
||||| ||||| ||||| | |||| || |||||||||||||||| |||||||| ||||||||| |
|
|
| T |
2630971 |
tgattttccaatggaggcaataacttaaactttctaatggaagggttccacaagaaataagaa |
2630909 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 406 - 476
Target Start/End: Original strand, 7324862 - 7324932
Alignment:
| Q |
406 |
ctaatggaaggattccacaacaaataagaaccagcttttagcatgcagcaaaagatgccatcgcaagagca |
476 |
Q |
| |
|
||||||||||| |||||||| ||||||||||| |||| ||||||| |||| |||||||| |||||||| |
|
|
| T |
7324862 |
ctaatggaagggttccacaaataataagaaccaactttgagcatgcccaaaaaaatgccatcacaagagca |
7324932 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University