View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20690_low_7 (Length: 227)

Name: NF20690_low_7
Description: NF20690
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20690_low_7
NF20690_low_7
[»] chr7 (51 HSPs)
chr7 (15-227)||(4247495-4247706)
chr7 (11-227)||(17811486-17811702)
chr7 (11-227)||(5058668-5058882)
chr7 (13-224)||(20570662-20570872)
chr7 (11-227)||(44944620-44944835)
chr7 (11-167)||(24989549-24989704)
chr7 (11-167)||(5715483-5715635)
chr7 (71-227)||(24725307-24725467)
chr7 (71-224)||(21846282-21846433)
chr7 (68-227)||(8346363-8346523)
chr7 (11-164)||(11326484-11326637)
chr7 (11-164)||(39182357-39182510)
chr7 (11-167)||(26565323-26565479)
chr7 (13-127)||(8304324-8304438)
chr7 (11-127)||(1981100-1981214)
chr7 (68-156)||(1977758-1977845)
chr7 (11-167)||(8572336-8572490)
chr7 (68-167)||(8329876-8329975)
chr7 (18-227)||(27221557-27221762)
chr7 (68-165)||(8343634-8343731)
chr7 (11-124)||(23618204-23618317)
chr7 (11-124)||(25842506-25842619)
chr7 (70-227)||(14055390-14055552)
chr7 (70-227)||(14365418-14365580)
chr7 (71-166)||(8329814-8329909)
chr7 (72-226)||(26617313-26617461)
chr7 (12-153)||(9685070-9685211)
chr7 (68-167)||(7730191-7730290)
chr7 (73-167)||(30294444-30294538)
chr7 (20-125)||(8629512-8629617)
chr7 (9-134)||(22687040-22687165)
chr7 (75-167)||(6916977-6917068)
chr7 (78-166)||(8346308-8346396)
chr7 (68-127)||(4574968-4575027)
chr7 (11-92)||(10285678-10285759)
chr7 (178-227)||(24990012-24990061)
chr7 (90-167)||(27509266-27509343)
chr7 (124-164)||(4247454-4247494)
chr7 (124-164)||(9685235-9685275)
chr7 (11-167)||(11325177-11325332)
chr7 (183-227)||(26281256-26281300)
chr7 (124-164)||(27221516-27221556)
chr7 (130-164)||(22687661-22687695)
chr7 (186-227)||(5715428-5715469)
chr7 (124-165)||(6916877-6916918)
chr7 (75-128)||(26340212-26340264)
chr7 (124-164)||(7730334-7730374)
chr7 (124-164)||(8346524-8346564)
chr7 (124-164)||(17811445-17811485)
chr7 (124-164)||(20570876-20570916)
chr7 (124-164)||(24990062-24990102)
[»] chr8 (43 HSPs)
chr8 (11-224)||(7489058-7489270)
chr8 (11-227)||(11879739-11879954)
chr8 (11-227)||(11897155-11897370)
chr8 (26-223)||(19704247-19704441)
chr8 (9-224)||(23142317-23142530)
chr8 (57-227)||(15294809-15294977)
chr8 (57-227)||(15475178-15475346)
chr8 (15-223)||(45403172-45403379)
chr8 (13-221)||(5922194-5922400)
chr8 (11-227)||(6810960-6811173)
chr8 (11-166)||(24414062-24414217)
chr8 (11-220)||(29384087-29384300)
chr8 (11-167)||(15761133-15761289)
chr8 (9-165)||(17647197-17647353)
chr8 (18-120)||(16752268-16752370)
chr8 (68-226)||(32424472-32424631)
chr8 (11-128)||(40541595-40541712)
chr8 (20-124)||(2040360-2040464)
chr8 (11-150)||(17566313-17566452)
chr8 (11-158)||(22909979-22910125)
chr8 (57-118)||(27836120-27836181)
chr8 (14-165)||(24056348-24056499)
chr8 (179-227)||(3094185-3094233)
chr8 (11-151)||(15231835-15231975)
chr8 (57-121)||(7262006-7262070)
chr8 (95-167)||(8582241-8582313)
chr8 (179-227)||(27836406-27836454)
chr8 (127-164)||(3094247-3094284)
chr8 (124-164)||(9212246-9212286)
chr8 (179-227)||(31424302-31424350)
chr8 (131-166)||(17647261-17647296)
chr8 (11-64)||(19335276-19335329)
chr8 (126-167)||(30240260-30240301)
chr8 (131-164)||(45403127-45403160)
chr8 (124-164)||(5922147-5922187)
chr8 (124-164)||(11879698-11879738)
chr8 (124-164)||(11897114-11897154)
chr8 (136-164)||(15294768-15294796)
chr8 (136-164)||(15475137-15475165)
chr8 (124-164)||(19704446-19704486)
chr8 (124-164)||(22910193-22910233)
chr8 (124-164)||(23142273-23142313)
chr8 (124-164)||(31424261-31424301)
[»] chr6 (37 HSPs)
chr6 (11-227)||(19748472-19748687)
chr6 (11-227)||(17103334-17103549)
chr6 (6-224)||(7918120-7918335)
chr6 (11-227)||(7223651-7223869)
chr6 (11-167)||(11327337-11327493)
chr6 (11-167)||(22498215-22498371)
chr6 (4-227)||(26053065-26053286)
chr6 (4-227)||(26073118-26073339)
chr6 (11-167)||(17543505-17543661)
chr6 (18-227)||(15527892-15528100)
chr6 (11-167)||(27233074-27233230)
chr6 (10-167)||(3573673-3573831)
chr6 (15-227)||(23897950-23898160)
chr6 (11-127)||(27890624-27890740)
chr6 (11-227)||(30912181-30912402)
chr6 (11-167)||(17250254-17250411)
chr6 (72-167)||(4841665-4841760)
chr6 (11-91)||(21354949-21355029)
chr6 (16-116)||(31108404-31108504)
chr6 (14-105)||(27614434-27614525)
chr6 (136-227)||(21354879-21354969)
chr6 (110-165)||(10508891-10508946)
chr6 (68-166)||(2912093-2912191)
chr6 (178-227)||(17543681-17543730)
chr6 (123-164)||(27233267-27233308)
chr6 (68-127)||(20432425-20432484)
chr6 (14-128)||(33583444-33583558)
chr6 (128-167)||(33593055-33593094)
chr6 (124-164)||(7223610-7223650)
chr6 (178-221)||(5422601-5422644)
chr6 (72-154)||(8275366-8275451)
chr6 (124-163)||(23897910-23897949)
chr6 (124-164)||(2912239-2912279)
chr6 (124-164)||(15528101-15528141)
chr6 (124-164)||(17103293-17103333)
chr6 (124-164)||(30912403-30912443)
chr6 (15-127)||(33592930-33593041)
[»] chr1 (38 HSPs)
chr1 (11-223)||(13100334-13100544)
chr1 (13-227)||(16125232-16125445)
chr1 (12-221)||(21846050-21846258)
chr1 (11-223)||(23528799-23529010)
chr1 (11-227)||(25146543-25146759)
chr1 (11-227)||(9351838-9352053)
chr1 (15-167)||(17869529-17869681)
chr1 (11-150)||(14074258-14074397)
chr1 (19-227)||(9954816-9955025)
chr1 (11-225)||(18304593-18304799)
chr1 (11-167)||(17055695-17055850)
chr1 (68-227)||(47785998-47786155)
chr1 (18-166)||(9128619-9128768)
chr1 (11-164)||(41032548-41032701)
chr1 (28-167)||(19009740-19009879)
chr1 (13-121)||(17197306-17197414)
chr1 (98-224)||(13276128-13276253)
chr1 (11-227)||(42179846-42180055)
chr1 (13-127)||(12002638-12002750)
chr1 (68-224)||(32881469-32881617)
chr1 (15-167)||(16434709-16434859)
chr1 (17-127)||(8773506-8773613)
chr1 (11-151)||(30619156-30619294)
chr1 (11-106)||(27502130-27502225)
chr1 (110-167)||(18228462-18228519)
chr1 (34-127)||(22789421-22789514)
chr1 (124-164)||(9327206-9327246)
chr1 (124-164)||(9352054-9352094)
chr1 (124-164)||(9955026-9955066)
chr1 (124-164)||(12513379-12513419)
chr1 (124-164)||(16125446-16125486)
chr1 (130-166)||(17055996-17056032)
chr1 (124-164)||(19009937-19009977)
chr1 (11-54)||(9954771-9954814)
chr1 (135-164)||(21846270-21846299)
chr1 (124-164)||(13276257-13276297)
chr1 (68-128)||(21242859-21242919)
chr1 (124-164)||(32881425-32881465)
[»] chr5 (29 HSPs)
chr5 (12-227)||(18843854-18844068)
chr5 (11-227)||(20321081-20321297)
chr5 (11-227)||(19579081-19579298)
chr5 (10-227)||(41688440-41688655)
chr5 (11-227)||(43235007-43235222)
chr5 (11-166)||(27339962-27340117)
chr5 (11-227)||(18051308-18051520)
chr5 (73-227)||(23172265-23172418)
chr5 (11-127)||(41427657-41427773)
chr5 (10-120)||(15051871-15051981)
chr5 (14-165)||(19042206-19042356)
chr5 (68-223)||(21058988-21059142)
chr5 (11-128)||(19377840-19377957)
chr5 (11-167)||(43005634-43005790)
chr5 (11-105)||(22645502-22645596)
chr5 (73-167)||(38158101-38158195)
chr5 (6-86)||(6852336-6852416)
chr5 (178-227)||(19979738-19979787)
chr5 (78-127)||(22984643-22984692)
chr5 (68-134)||(24648240-24648306)
chr5 (11-127)||(13341472-13341588)
chr5 (72-222)||(26021464-26021612)
chr5 (10-57)||(34702976-34703023)
chr5 (178-211)||(27340131-27340164)
chr5 (124-164)||(18051521-18051561)
chr5 (124-164)||(19579040-19579080)
chr5 (124-164)||(19979697-19979737)
chr5 (124-164)||(21059147-21059187)
chr5 (124-164)||(41688656-41688696)
[»] scaffold0186 (2 HSPs)
scaffold0186 (11-227)||(8582-8795)
scaffold0186 (124-164)||(8541-8581)
[»] chr4 (34 HSPs)
chr4 (11-227)||(5375803-5376019)
chr4 (11-227)||(9770251-9770466)
chr4 (11-226)||(36120964-36121177)
chr4 (11-227)||(9911186-9911401)
chr4 (12-224)||(23064737-23064948)
chr4 (11-128)||(55476225-55476342)
chr4 (11-227)||(8010915-8011127)
chr4 (11-163)||(6346730-6346882)
chr4 (68-223)||(10143042-10143197)
chr4 (68-227)||(5361797-5361953)
chr4 (68-153)||(37240450-37240536)
chr4 (71-167)||(7044961-7045057)
chr4 (68-227)||(17466218-17466376)
chr4 (72-167)||(24719773-24719868)
chr4 (11-164)||(7452707-7452859)
chr4 (12-153)||(13551448-13551589)
chr4 (178-227)||(13023709-13023758)
chr4 (68-167)||(10394809-10394907)
chr4 (20-127)||(13023796-13023903)
chr4 (70-222)||(9149556-9149709)
chr4 (11-167)||(7045140-7045298)
chr4 (116-166)||(4157051-4157101)
chr4 (57-127)||(8367440-8367510)
chr4 (18-91)||(8409790-8409863)
chr4 (124-165)||(13023667-13023708)
chr4 (124-164)||(9911402-9911442)
chr4 (124-164)||(13551613-13551653)
chr4 (178-224)||(37240399-37240445)
chr4 (129-166)||(5884186-5884223)
chr4 (11-223)||(8889371-8889570)
chr4 (123-164)||(36120922-36120963)
chr4 (178-222)||(8409725-8409769)
chr4 (124-164)||(8889326-8889366)
chr4 (124-164)||(10142997-10143037)
[»] chr3 (42 HSPs)
chr3 (11-227)||(28745915-28746130)
chr3 (11-227)||(24619972-24620190)
chr3 (14-227)||(39428041-39428258)
chr3 (11-127)||(8592174-8592290)
chr3 (11-167)||(29067475-29067630)
chr3 (57-167)||(20756220-20756330)
chr3 (11-127)||(8560232-8560348)
chr3 (70-227)||(42696986-42697143)
chr3 (11-127)||(18014229-18014345)
chr3 (14-222)||(27676579-27676787)
chr3 (11-167)||(17064505-17064661)
chr3 (11-127)||(20766676-20766792)
chr3 (18-124)||(3041464-3041570)
chr3 (10-167)||(10872489-10872646)
chr3 (11-120)||(22971054-22971162)
chr3 (11-167)||(25870097-25870253)
chr3 (11-156)||(27090645-27090796)
chr3 (68-167)||(6136401-6136500)
chr3 (68-167)||(13286142-13286241)
chr3 (11-167)||(22355841-22355993)
chr3 (70-226)||(22137417-22137572)
chr3 (68-167)||(3449142-3449241)
chr3 (12-127)||(19348791-19348906)
chr3 (11-167)||(28135960-28136116)
chr3 (178-227)||(15515197-15515246)
chr3 (11-75)||(24649524-24649588)
chr3 (14-127)||(21553671-21553783)
chr3 (68-161)||(17796771-17796862)
chr3 (68-161)||(19105211-19105302)
chr3 (70-166)||(21963630-21963726)
chr3 (70-166)||(21986066-21986162)
chr3 (68-167)||(9152817-9152915)
chr3 (180-227)||(22494731-22494778)
chr3 (129-167)||(6861032-6861070)
chr3 (71-227)||(8155964-8156120)
chr3 (18-91)||(9169869-9169942)
chr3 (124-164)||(8156121-8156161)
chr3 (11-118)||(41671426-41671533)
chr3 (124-164)||(28745868-28745908)
chr3 (124-164)||(29067382-29067422)
chr3 (124-160)||(39428004-39428040)
chr3 (124-164)||(42696945-42696985)
[»] chr2 (34 HSPs)
chr2 (11-167)||(20063921-20064077)
chr2 (15-227)||(31237755-31237967)
chr2 (11-167)||(19262091-19262247)
chr2 (56-227)||(36429987-36430157)
chr2 (9-227)||(25538918-25539136)
chr2 (11-167)||(30433013-30433169)
chr2 (10-163)||(1404985-1405138)
chr2 (11-127)||(21869096-21869212)
chr2 (21-124)||(27523881-27523984)
chr2 (18-124)||(20034004-20034110)
chr2 (11-127)||(974576-974693)
chr2 (11-124)||(7302023-7302136)
chr2 (11-167)||(8428420-8428576)
chr2 (68-167)||(13502505-13502604)
chr2 (70-223)||(35565788-35565940)
chr2 (68-163)||(27406993-27407088)
chr2 (71-227)||(15588690-15588840)
chr2 (71-163)||(16766987-16767079)
chr2 (11-127)||(19245827-19245943)
chr2 (178-227)||(31578143-31578192)
chr2 (128-167)||(31023500-31023539)
chr2 (57-124)||(34578130-34578197)
chr2 (118-227)||(1690610-1690718)
chr2 (135-168)||(19491950-19491983)
chr2 (124-164)||(31237968-31238008)
chr2 (68-123)||(27749341-27749396)
chr2 (129-227)||(34841719-34841817)
chr2 (128-166)||(16767049-16767087)
chr2 (128-166)||(16767186-16767224)
chr2 (123-164)||(1404881-1404922)
chr2 (133-166)||(1405047-1405080)
chr2 (115-167)||(5395401-5395453)
chr2 (124-164)||(30432517-30432557)
chr2 (124-164)||(36429946-36429986)
[»] scaffold0016 (1 HSPs)
scaffold0016 (11-167)||(56200-56356)
[»] scaffold0042 (2 HSPs)
scaffold0042 (70-167)||(93539-93636)
scaffold0042 (130-163)||(93703-93736)
[»] scaffold0017 (1 HSPs)
scaffold0017 (11-124)||(38302-38414)
[»] scaffold0048 (2 HSPs)
scaffold0048 (9-165)||(61087-61243)
scaffold0048 (71-165)||(48497-48591)
[»] scaffold0603 (2 HSPs)
scaffold0603 (71-227)||(8794-8950)
scaffold0603 (129-166)||(8787-8824)
[»] scaffold0079 (1 HSPs)
scaffold0079 (11-124)||(14701-14814)
[»] scaffold2084 (1 HSPs)
scaffold2084 (11-108)||(85-182)
[»] scaffold0526 (1 HSPs)
scaffold0526 (11-127)||(8394-8510)
[»] scaffold0534 (1 HSPs)
scaffold0534 (11-150)||(885-1024)
[»] scaffold0417 (1 HSPs)
scaffold0417 (70-167)||(7289-7386)
[»] scaffold0061 (1 HSPs)
scaffold0061 (11-124)||(76084-76196)
[»] scaffold0510 (1 HSPs)
scaffold0510 (68-164)||(36-131)
[»] scaffold0150 (1 HSPs)
scaffold0150 (70-167)||(33131-33233)
[»] scaffold0027 (1 HSPs)
scaffold0027 (68-124)||(132947-133003)
[»] scaffold0182 (1 HSPs)
scaffold0182 (29-124)||(24627-24722)
[»] scaffold0028 (1 HSPs)
scaffold0028 (68-167)||(145781-145885)
[»] scaffold0001 (1 HSPs)
scaffold0001 (71-127)||(142867-142923)
[»] scaffold0036 (1 HSPs)
scaffold0036 (122-158)||(37011-37047)


Alignment Details
Target: chr7 (Bit Score: 161; Significance: 5e-86; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 15 - 227
Target Start/End: Complemental strand, 4247706 - 4247495
Alignment:
Q  15 ttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatttttg 114  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  4247706 ttgtcaaaattgggactttacttcaagtcgaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcaaaggattttactcaaggatttttg 4247607  T
Q  115 tagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacctnnnnnnnnntaatactaaatatatgttacaaatgatatatagtcat 214  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||    
T  4247606 tagaatcgatataagaaatcataaaatcgcaatcaaaatcgatggattttacct-aaaaaaaataatactaaatatatgttacaaatgatatatagtcat 4247508  T
Q  215 aaatgacttagtt 227  Q
    |||||||||||||    
T  4247507 aaatgacttagtt 4247495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 11 - 227
Target Start/End: Complemental strand, 17811702 - 17811486
Alignment:
Q  11 aaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatt 110  Q
    ||||||||||||||||||||||||||||| ||||||||||||||  ||||| |||||||||||||||||||||||| |||||  |||||||||||||| |    
T  17811702 aaggttgtcaaaatcgggactttacttcaggtcaaaagggaatagcaaaatcgggattcgtaaaatcgcaatcaaaatcgaaagattttactcaaggact 17811603  T
Q  111 tttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacctnnnnnnnnntaatactaaatatatgttacaaatgatatatag 210  Q
    ||||||||||||||||| |||||  ||||||||||||||||||||||||||||||||          ||||| ||||||||| ||| ||||| ||||||     
T  17811602 tttgtagaatcgatatagaaaattgtaaaatcgcaatcaaaatcgatggattttacccaaaaaatattaatattaaatatattttataaatggtatataa 17811503  T
Q  211 tcataaatgacttagtt 227  Q
    | |||||||||||||||    
T  17811502 ttataaatgacttagtt 17811486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 11 - 227
Target Start/End: Complemental strand, 5058882 - 5058668
Alignment:
Q  11 aaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatt 110  Q
    |||||||||||||||||||||||||||||  |||||||||||||  ||||| || ||||||||||| ||||||||| |||||| |||||| ||||||| |    
T  5058882 aaggttgtcaaaatcgggactttacttcagatcaaaagggaatagcaaaatcggaattcgtaaaattgcaatcaaaatcgaaggattttaatcaaggaat 5058783  T
Q  111 tttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacctnnnnnnnnntaatactaaatatatgttacaaatgatatatag 210  Q
    ||||| |||||||||||||||||  ||||||||||||||||||||||||| ||||||          ||||||||||||||||||| ||||| |||||||    
T  5058782 tttgt-gaatcgatataaaaaattgtaaaatcgcaatcaaaatcgatggactttacc-aaaaaataataatactaaatatatgttataaatggtatatag 5058685  T
Q  211 tcataaatgacttagtt 227  Q
    |||||||||||||||||    
T  5058684 tcataaatgacttagtt 5058668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 13 - 224
Target Start/End: Original strand, 20570662 - 20570872
Alignment:
Q  13 ggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatttt 112  Q
    ||||||||||||||||||| ||||||| ||  ||||||||||  ||||||| || || |||||||||||||||| | |||  |||||||||||||| |||    
T  20570662 ggttgtcaaaatcgggactctacttcaggttgaaagggaataacaaaattgagactcataaaatcgcaatcaaaattgaaagattttactcaaggacttt 20570761  T
Q  113 tgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacctnnnnnnnnntaatactaaatatatgttacaaatgatatatagtc 212  Q
    |||||||||||||||| |||| |||||||| ||||||||||||||||| ||||||          ||||||||||||||||||| ||||| |||||||||    
T  20570762 tgtagaatcgatataagaaattataaaatcacaatcaaaatcgatggactttacc-aaaaaagaataatactaaatatatgttataaatggtatatagtc 20570860  T
Q  213 ataaatgactta 224  Q
    ||||||||||||    
T  20570861 ataaatgactta 20570872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 11 - 227
Target Start/End: Original strand, 44944620 - 44944835
Alignment:
Q  11 aaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatt 110  Q
    |||||||||||||||||||||||||||||  || ||||| ||||  |||   |||| ||||||||||||||| ||| ||||| ||||||||| ||||| |    
T  44944620 aaggttgtcaaaatcgggactttacttcagatcgaaaggaaatagcaaatgcgggactcgtaaaatcgcaattaaaatcgaacaattttacttaaggact 44944719  T
Q  111 tttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacctnnnnnnnnntaatactaaatatatgttacaaatgatatatag 210  Q
    |||||||||||||||||| ||||  |||||||||||||||||||||| || ||||||          ||||||||||||||||||| ||||| |||||||    
T  44944720 tttgtagaatcgatataagaaattgtaaaatcgcaatcaaaatcgatagactttacc-aaaaaataataatactaaatatatgttataaatggtatatag 44944818  T
Q  211 tcataaatgacttagtt 227  Q
    |||||||||||||||||    
T  44944819 tcataaatgacttagtt 44944835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 11 - 167
Target Start/End: Original strand, 24989549 - 24989704
Alignment:
Q  11 aaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatt 110  Q
    ||||||||||||||||||||||||||| | ||| ||||||||||  ||||| |||| ||||||||| ||||||||| |||||| |||||||| ||||| |    
T  24989549 aaggttgtcaaaatcgggactttactttaggtcgaaagggaataacaaaatcgggactcgtaaaatggcaatcaaaatcgaaggattttact-aaggact 24989647  T
Q  111 tttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacc 167  Q
    |||||||||||||||||  |||| |||||||||||||||||||||||||||||||||    
T  24989648 tttgtagaatcgatataggaaattataaaatcgcaatcaaaatcgatggattttacc 24989704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 11 - 167
Target Start/End: Complemental strand, 5715635 - 5715483
Alignment:
Q  11 aaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatt 110  Q
    ||||||||||||||||||||||||||    ||| ||||| |||| |||||| |||| ||||||||||||||||||| |||| | |||||||||||||| |    
T  5715635 aaggttgtcaaaatcgggactttact----gtcgaaaggaaatagaaaaatcgggactcgtaaaatcgcaatcaaaatcgagggattttactcaaggact 5715540  T
Q  111 tttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacc 167  Q
    |||||||||||||||||  |||| |||||||||||||||||||||||| ||||||||    
T  5715539 tttgtagaatcgatataggaaattataaaatcgcaatcaaaatcgatgaattttacc 5715483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 71 - 227
Target Start/End: Original strand, 24725307 - 24725467
Alignment:
Q  71 taaaatcgcaatcaaattcgaagaattttactcaaggatttttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacc--- 167  Q
    |||||||||||||||| || ||| |||||||||||||| ||||||||||||||||||  ||||  ||||||||||||||||||||||||||||||||       
T  24725307 taaaatcgcaatcaaaatcaaaggattttactcaaggacttttgtagaatcgatataggaaattgtaaaatcgcaatcaaaatcgatggattttacccaa 24725406  T
Q  168 -tnnnnnnnnntaatactaaatatatgttacaaatgatatatagtcataaatgacttagtt 227  Q
               ||||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  24725407 aaaaaataaaataatactaaatatatgttataaatggtatatagtcataaatgacttagtt 24725467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 71 - 224
Target Start/End: Original strand, 21846282 - 21846433
Alignment:
Q  71 taaaatcgcaatcaaattcgaagaattttactcaaggatttttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacctnn 170  Q
    ||||||||||| |||| |||||| |||||| ||||  | |||| |||||||||||||| ||||| ||||||| |||||||||| |||||||||||||       
T  21846282 taaaatcgcaaccaaaatcgaaggattttaatcaactacttttatagaatcgatataagaaatcgtaaaatcacaatcaaaattgatggattttacc--c 21846379  T
Q  171 nnnnnnntaatactaaatatatgttacaaatgatatatagtcataaatgactta 224  Q
           ||||| ||||||||||||| |||||||||||||||||||||||||||    
T  21846380 aaataaataatattaaatatatgttataaatgatatatagtcataaatgactta 21846433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 68 - 227
Target Start/End: Original strand, 8346363 - 8346523
Alignment:
Q  68 tcgtaaaatcgcaatcaaattcgaagaattttactcaaggatttttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacc 167  Q
    |||||| |||||||||||| || ||| |||||||||||  | ||||||||||| ||||||| ||||||||||||| |||||| |||| ||||||||||||    
T  8346363 tcgtaatatcgcaatcaaaatcaaaggattttactcaactacttttgtagaattgatataagaaatcataaaatctcaatcataatcaatggattttacc 8346462  T
Q  168 tnnnnnnnnntaatactaaatatatgtta-caaatgatatatagtcataaatgacttagtt 227  Q
              |||||||||||||||||||  ||||||||||||| |||| |||||||||||    
T  8346463 aaaaaaataataatactaaatatatgttataaaatgatatatagacatagatgacttagtt 8346523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 11 - 164
Target Start/End: Complemental strand, 11326637 - 11326484
Alignment:
Q  11 aaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatt 110  Q
    ||||||||||||||| | |||||| |||| ||  |||| |||||  |||||||||| || ||||||| |||||||| | |||| |||||||||||||| |    
T  11326637 aaggttgtcaaaatcagaactttatttcaggtggaaagagaatagcaaaattgggactcttaaaatcacaatcaaaattgaagtattttactcaaggact 11326538  T
Q  111 tttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggatttt 164  Q
    ||||| ||||| |||||  ||||  |||||||||||||||||||||| ||||||    
T  11326537 tttgtggaatcaatataggaaattgtaaaatcgcaatcaaaatcgatagatttt 11326484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 11 - 164
Target Start/End: Complemental strand, 39182510 - 39182357
Alignment:
Q  11 aaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatt 110  Q
    |||||||||||||||| || ||| |||||  || |||| ||| | |||||| |  | |||||||||||||| |||| |||||| |||||||||||  | |    
T  39182510 aaggttgtcaaaatcgtgattttgcttcagttccaaagagaagagaaaaatcgacaatcgtaaaatcgcaaccaaaatcgaaggattttactcaactact 39182411  T
Q  111 tttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggatttt 164  Q
    |||||||||||||||||| ||||  ||||||||||| |||||||||||||||||    
T  39182410 tttgtagaatcgatataagaaattgtaaaatcgcaaccaaaatcgatggatttt 39182357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 11 - 167
Target Start/End: Original strand, 26565323 - 26565479
Alignment:
Q  11 aaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatt 110  Q
    |||||||||||||| ||||  || ||||| || ||||||||| |  ||||  |  | ||||||||||| ||||||| |||||| |||||||||||  | |    
T  26565323 aaggttgtcaaaattgggatctttcttcaggttaaaagggaagaacaaaaacgaaaatcgtaaaatcgtaatcaaaatcgaaggattttactcaactact 26565422  T
Q  111 tttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacc 167  Q
    ||||||||||| |||||||||||| |||||| ||||||||||| |||||||||||||    
T  26565423 tttgtagaatcaatataaaaaatcgtaaaattgcaatcaaaattgatggattttacc 26565479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 13 - 127
Target Start/End: Complemental strand, 8304438 - 8304324
Alignment:
Q  13 ggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatttt 112  Q
    |||||||||||||| |||||||||||||||| |||| || ||  ||||| | || |||||||||| |||||||| |||||| |||||||||||||| |||    
T  8304438 ggttgtcaaaatcgagactttacttcaagtcgaaagagagtagcaaaatcgcgactcgtaaaatcacaatcaaaatcgaaggattttactcaaggacttt 8304339  T
Q  113 tgtagaatcgatata 127  Q
    |||||||| ||||||    
T  8304338 tgtagaattgatata 8304324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 11 - 127
Target Start/End: Original strand, 1981100 - 1981214
Alignment:
Q  11 aaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatt 110  Q
    |||||| |||||||||||||||||||||||||| ||||||| || ||||||||| | ||||||||||| ||||||| |||||| |  ||||||||||  |    
T  1981100 aaggttatcaaaatcgggactttacttcaagtcgaaagggattagaaaaattggaactcgtaaaatcgtaatcaaaatcgaagga--ttactcaaggtct 1981197  T
Q  111 tttgtagaatcgatata 127  Q
    || ||||||||||||||    
T  1981198 ttagtagaatcgatata 1981214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 68 - 156
Target Start/End: Complemental strand, 1977845 - 1977758
Alignment:
Q  68 tcgtaaaatcgcaatcaaattcgaagaattttactcaaggatttttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcga 156  Q
    ||||||||||||||||||| |||||| |||||||||||  |||||| |||||||||||||| ||||| |||||||||||||||||||||    
T  1977845 tcgtaaaatcgcaatcaaaatcgaaggattttactcaattattttt-tagaatcgatataagaaatcctaaaatcgcaatcaaaatcga 1977758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 11 - 167
Target Start/End: Complemental strand, 8572490 - 8572336
Alignment:
Q  11 aaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatt 110  Q
    |||||||||||||| |||||||||  ||||||| ||||||||||  || ||||||| || | |||||||||||||| |||||  || ||| |||||||      
T  8572490 aaggttgtcaaaattgggactttatctcaagtcgaaagggaatagtaatattgggactc-ttaaatcgcaatcaaaatcgaaagatgttaatcaaggaca 8572392  T
Q  111 tttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacc 167  Q
    |||||||||| ||||| | |||| ||||||| |||||||||||| ||||||||||||    
T  8572391 tttgtagaattgatat-agaaattataaaattgcaatcaaaatcaatggattttacc 8572336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 68 - 167
Target Start/End: Original strand, 8329876 - 8329975
Alignment:
Q  68 tcgtaaaatcgcaatcaaattcgaagaattttactcaaggatttttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacc 167  Q
    ||||||||||||||||||| || ||| |||||||||||  | ||||||||||| ||||||| ||||| |||||| |||||||||||| ||||||||||||    
T  8329876 tcgtaaaatcgcaatcaaaatcaaaggattttactcaactacttttgtagaattgatataagaaatcgtaaaattgcaatcaaaatcaatggattttacc 8329975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 18 - 227
Target Start/End: Complemental strand, 27221762 - 27221557
Alignment:
Q  18 tcaaaatcgggactttacttcaag-tcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatttttgta 116  Q
    ||||||||||||||||||||  || || |||| | |||  ||||| |||||||||||||||||||||||| |||||| |||||||||   || |||||||    
T  27221762 tcaaaatcgggactttacttttaggtcgaaagagtatagcaaaatcgggattcgtaaaatcgcaatcaaaatcgaaggattttactcggagacttttgta 27221663  T
Q  117 gaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacctnnnnnnnnntaatactaaatatatgttacaaatgatatatagtcataa 216  Q
    |||||||| ||  ||||  |||||||||||| ||||||||  |||| ||||           || |||| |||||||||| ||||| |||||||||||||    
T  27221662 gaatcgatgtaggaaattgtaaaatcgcaattaaaatcgactgattgtacc-----aaaaaaaaaactatatatatgttataaatggtatatagtcataa 27221568  T
Q  217 atgacttagtt 227  Q
    |||||||||||    
T  27221567 atgacttagtt 27221557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 68 - 165
Target Start/End: Original strand, 8343634 - 8343731
Alignment:
Q  68 tcgtaaaatcgcaatcaaattcgaagaattttactcaaggatttttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggatttta 165  Q
    ||||||||  ||||||||| |||||| |||||||||||  | ||||||||||| ||||||||||||| |||||||||||||||| || ||||||||||    
T  8343634 tcgtaaaaatgcaatcaaaatcgaagtattttactcaactacttttgtagaattgatataaaaaatcgtaaaatcgcaatcaaagtcaatggatttta 8343731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 11 - 124
Target Start/End: Original strand, 23618204 - 23618317
Alignment:
Q  11 aaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatt 110  Q
    |||||| ||||||||  |||||||||| ||||  ||||||| ||  ||||| |||| ||  ||||||||||||||| ||||||||||||||||||||| |    
T  23618204 aaggttatcaaaatcaagactttactttaagttgaaagggagtagcaaaatcgggactccgaaaatcgcaatcaaaatcgaagaattttactcaaggact 23618303  T
Q  111 tttgtagaatcgat 124  Q
    ||||||||||||||    
T  23618304 tttgtagaatcgat 23618317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 11 - 124
Target Start/End: Original strand, 25842506 - 25842619
Alignment:
Q  11 aaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatt 110  Q
    |||||| ||||||| |||||||||||||||||| ||||||| ||  ||||| |||| ||||||||||||||||||| | | || |||||||||| | | |    
T  25842506 aaggttatcaaaattgggactttacttcaagtcgaaagggagtagcaaaatcgggactcgtaaaatcgcaatcaaaattggaggattttactcatgaact 25842605  T
Q  111 tttgtagaatcgat 124  Q
    ||||||||||||||    
T  25842606 tttgtagaatcgat 25842619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 70 - 227
Target Start/End: Complemental strand, 14055552 - 14055390
Alignment:
Q  70 gtaaaatcgcaatcaaattcgaagaattttactcaaggatttttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacc-- 167  Q
    |||||||||||| |||| |||||| |||||||||||  | |||||||||| |||||||| ||||   |||||||||||||||||| ||||||||||||      
T  14055552 gtaaaatcgcaaccaaaatcgaaggattttactcaactacttttgtagaaacgatataagaaattgcaaaatcgcaatcaaaatcaatggattttaccaa 14055453  T
Q  168 ---tnnnnnnnnntaatactaaatatatgttacaaatgatatatagtcataaatgacttagtt 227  Q
                 ||||| ||||||||||||| ||||| ||||||||||||||||||||||||    
T  14055452 caaaaaaaaaagataatattaaatatatgttataaatggtatatagtcataaatgacttagtt 14055390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 70 - 227
Target Start/End: Complemental strand, 14365580 - 14365418
Alignment:
Q  70 gtaaaatcgcaatcaaattcgaagaattttactcaaggatttttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacc-- 167  Q
    |||||||||||| |||| |||||| |||||||||||  | |||||||||| |||||||| ||||   |||||||||||||||||| ||||||||||||      
T  14365580 gtaaaatcgcaaccaaaatcgaaggattttactcaactacttttgtagaaacgatataagaaattgcaaaatcgcaatcaaaatcaatggattttaccaa 14365481  T
Q  168 ---tnnnnnnnnntaatactaaatatatgttacaaatgatatatagtcataaatgacttagtt 227  Q
                 ||||| ||||||||||||| ||||| ||||||||||||||||||||||||    
T  14365480 caaaaaaaaaagataatattaaatatatgttataaatggtatatagtcataaatgacttagtt 14365418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 71 - 166
Target Start/End: Original strand, 8329814 - 8329909
Alignment:
Q  71 taaaatcgcaatcaaattcgaagaattttactcaaggatttttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttac 166  Q
    |||||| ||||||||| | |||| |||||||||||  | ||||||||||| ||||||| ||||| ||||||||||||||||||| | |||||||||    
T  8329814 taaaattgcaatcaaaattgaaggattttactcaactacttttgtagaattgatataagaaatcgtaaaatcgcaatcaaaatcaaaggattttac 8329909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 72 - 226
Target Start/End: Original strand, 26617313 - 26617461
Alignment:
Q  72 aaaatcgcaatcaaattcgaagaattttactcaaggatttttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacctnnn 171  Q
    ||||||||||  |||||| ||| ||||| |||||  ||||||||||||  ||||||||||||  |||||||||||||||||||||| ||||||||         
T  26617313 aaaatcgcaactaaattcaaaggattttgctcaattatttttgtagaaaggatataaaaaattgtaaaatcgcaatcaaaatcgattgattttac--aaa 26617410  T
Q  172 nnnnnntaatactaaatatatgttacaaatgatatatagtcataaatgacttagt 226  Q
          ||||||||||||||||||| |||||    ||||||||||||||||||||    
T  26617411 aaaaaataatactaaatatatgttataaatg----atagtcataaatgacttagt 26617461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 12 - 153
Target Start/End: Original strand, 9685070 - 9685211
Alignment:
Q  12 aggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggattt 111  Q
    ||||||| || ||| ||||||||||||  ||| ||| ||||||  |||||   || ||||||||||||||| ||| |||||| ||||||||| |||| ||    
T  9685070 aggttgtaaagatccggactttacttctggtcgaaaaggaatagcaaaatcaagactcgtaaaatcgcaattaaaatcgaaggattttactcgaggactt 9685169  T
Q  112 ttgtagaatcgatataaaaaatcataaaatcgcaatcaaaat 153  Q
    || |||||||||| || |||||  ||||||| ||||||||||    
T  9685170 ttatagaatcgatttagaaaattttaaaatcacaatcaaaat 9685211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 68 - 167
Target Start/End: Original strand, 7730191 - 7730290
Alignment:
Q  68 tcgtaaaatcgcaatcaaattcgaagaattttactcaaggatttttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacc 167  Q
    |||||||||||||| |||| |||||   ||||||||||  | ||||||| ||| ||||||| ||||  |||||||||||||||||| |||||||||||||    
T  7730191 tcgtaaaatcgcaaccaaaatcgaatggttttactcaactacttttgtataattgatataagaaattgtaaaatcgcaatcaaaattgatggattttacc 7730290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 73 - 167
Target Start/End: Complemental strand, 30294538 - 30294444
Alignment:
Q  73 aaatcgcaatcaaattcgaagaattttactcaaggatttttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacc 167  Q
    ||||| |||||||| |||||| |||||||| ||  | |||| ||||||||||| || ||||| ||||||| |||||||| |||||||||||||||    
T  30294538 aaatcacaatcaaaatcgaaggattttacttaactacttttatagaatcgataaaagaaatcctaaaatcacaatcaaactcgatggattttacc 30294444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 20 - 125
Target Start/End: Original strand, 8629512 - 8629617
Alignment:
Q  20 aaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatttttgtagaa 119  Q
    ||||||||||||| |||| | ||  ||||||||||  |||||||||| || ||||| |||||||| | ||  ||| ||||||||||||| ||||||||||    
T  8629512 aaaatcgggacttcactttaggttgaaagggaatagtaaaattgggactcataaaaacgcaatcacaatcagagagttttactcaaggaattttgtagaa 8629611  T
Q  120 tcgata 125  Q
    ||||||    
T  8629612 tcgata 8629617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 9 - 134
Target Start/End: Original strand, 22687040 - 22687165
Alignment:
Q  9 caaaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaagga 108  Q
    |||||||||| |||||||||| ||| |||||  || |||| ||| |  ||||| | || |||||||||| ||| |||| | ||||||||||||||||  |    
T  22687040 caaaggttgttaaaatcgggattttgcttcagatcgaaagagaagagcaaaatcgagaatcgtaaaatcacaaccaaaattgaagaattttactcaacta 22687139  T
Q  109 tttttgtagaatcgatataaaaaatc 134  Q
     ||||||||||||||||||| |||||    
T  22687140 cttttgtagaatcgatataagaaatc 22687165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 75 - 167
Target Start/End: Complemental strand, 6917068 - 6916977
Alignment:
Q  75 atcgcaatcaaattcgaagaattttactcaaggatttttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacc 167  Q
    |||||||||||| | |||| |||||||||||  | |||  || ||||||||||| |||| ||||||| |||||||||||||||| ||||||||    
T  6917068 atcgcaatcaaaattgaaggattttactcaactactttcata-aatcgatataagaaattataaaattgcaatcaaaatcgatgaattttacc 6916977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 78 - 166
Target Start/End: Original strand, 8346308 - 8346396
Alignment:
Q  78 gcaatcaaattcgaagaattttactcaaggatttttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttac 166  Q
    |||| |||| |||||| |||||||||||  | |||| |||||| ||||||| ||||| ||| ||||||||||||||| | |||||||||    
T  8346308 gcaaacaaaatcgaaggattttactcaactacttttatagaattgatataagaaatcgtaatatcgcaatcaaaatcaaaggattttac 8346396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 68 - 127
Target Start/End: Complemental strand, 4575027 - 4574968
Alignment:
Q  68 tcgtaaaatcgcaatcaaattcgaagaattttactcaaggatttttgtagaatcgatata 127  Q
    ||||||||||||||||||| || ||||||| |||||||  | ||||||||||||||||||    
T  4575027 tcgtaaaatcgcaatcaaaatcaaagaattctactcaactacttttgtagaatcgatata 4574968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 92
Target Start/End: Original strand, 10285678 - 10285759
Alignment:
Q  11 aaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaa 92  Q
    ||||||||||||||||||| ||||||||| ||| |||| ||| | ||||||    | ||||||||||||||||||| |||||    
T  10285678 aaggttgtcaaaatcgggattttacttcaggtcgaaagagaagagaaaaatcaacaatcgtaaaatcgcaatcaaaatcgaa 10285759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 227
Target Start/End: Original strand, 24990012 - 24990061
Alignment:
Q  178 taatactaaatatatgttacaaatgatatatagtcataaatgacttagtt 227  Q
    ||||||||||||||||||| ||||  ||||||||||||||||| ||||||    
T  24990012 taatactaaatatatgttataaatagtatatagtcataaatgatttagtt 24990061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 167
Target Start/End: Original strand, 27509266 - 27509343
Alignment:
Q  90 gaagaattttactcaaggatttttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacc 167  Q
    |||| |||||||||||  | |||| |||||||||||||| ||||  |||||||||||| ||| ||||| |||||||||    
T  27509266 gaaggattttactcaactacttttatagaatcgatataagaaattgtaaaatcgcaataaaattcgattgattttacc 27509343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 164
Target Start/End: Complemental strand, 4247494 - 4247454
Alignment:
Q  124 tataaaaaatcataaaatcgcaatcaaaatcgatggatttt 164  Q
    ||||| ||||||||||||||||||||||||||||| |||||    
T  4247494 tataagaaatcataaaatcgcaatcaaaatcgatgaatttt 4247454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 164
Target Start/End: Original strand, 9685235 - 9685275
Alignment:
Q  124 tataaaaaatcataaaatcgcaatcaaaatcgatggatttt 164  Q
    ||||| |||||||||||||||||| ||||||||||||||||    
T  9685235 tataagaaatcataaaatcgcaattaaaatcgatggatttt 9685275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 167
Target Start/End: Complemental strand, 11325332 - 11325177
Alignment:
Q  11 aaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatt 110  Q
    |||||||||||||| ||||  || ||||| |||||||| ||| |  ||||| |  | |||||||||||||| ||||||  |||  ||||||||||  | |    
T  11325332 aaggttgtcaaaattgggatcttgcttcacgtcaaaagagaagagcaaaatcgacaatcgtaaaatcgcaaccaaatttcaagggttttactcaactact 11325233  T
Q  111 tttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacc 167  Q
    | |||| ||| |||||| ||| |  ||||||  ||||||||||||||||||||||||    
T  11325232 tctgtaaaattgatatagaaattg-taaaattacaatcaaaatcgatggattttacc 11325177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 227
Target Start/End: Original strand, 26281256 - 26281300
Alignment:
Q  183 ctaaatatatgttacaaatgatatatagtcataaatgacttagtt 227  Q
    ||||||||| |||| ||||| ||||||||||||||||||||||||    
T  26281256 ctaaatataagttataaatggtatatagtcataaatgacttagtt 26281300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 164
Target Start/End: Complemental strand, 27221556 - 27221516
Alignment:
Q  124 tataaaaaatcataaaatcgcaatcaaaatcgatggatttt 164  Q
    ||||| ||||| |||||||||||||||||||||||||||||    
T  27221556 tataagaaatcgtaaaatcgcaatcaaaatcgatggatttt 27221516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 164
Target Start/End: Original strand, 22687661 - 22687695
Alignment:
Q  130 aaatcataaaatcgcaatcaaaatcgatggatttt 164  Q
    ||||| |||||||||||||||||||||||||||||    
T  22687661 aaatcgtaaaatcgcaatcaaaatcgatggatttt 22687695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 227
Target Start/End: Complemental strand, 5715469 - 5715428
Alignment:
Q  186 aatatatgttacaaatgatatatagtcataaatgacttagtt 227  Q
    ||||||||||| ||||| |||||| |||||||||||||||||    
T  5715469 aatatatgttataaatggtatataatcataaatgacttagtt 5715428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 124 - 165
Target Start/End: Complemental strand, 6916918 - 6916877
Alignment:
Q  124 tataaaaaatcataaaatcgcaatcaaaatcgatggatttta 165  Q
    ||||| ||||| ||||||||||||||||| ||||||||||||    
T  6916918 tataagaaatcgtaaaatcgcaatcaaaaccgatggatttta 6916877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 75 - 128
Target Start/End: Original strand, 26340212 - 26340264
Alignment:
Q  75 atcgcaatcaaattcgaagaattttactcaaggatttttgtagaatcgatataa 128  Q
    |||||||||||| ||||||||||||||||||  | |||| ||||||||||||||    
T  26340212 atcgcaatcaaaatcgaagaattttactcaa-aacttttatagaatcgatataa 26340264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 164
Target Start/End: Original strand, 7730334 - 7730374
Alignment:
Q  124 tataaaaaatcataaaatcgcaatcaaaatcgatggatttt 164  Q
    ||||| ||||| ||||||| |||||||||||||||||||||    
T  7730334 tataagaaatcgtaaaatctcaatcaaaatcgatggatttt 7730374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 164
Target Start/End: Original strand, 8346524 - 8346564
Alignment:
Q  124 tataaaaaatcataaaatcgcaatcaaaatcgatggatttt 164  Q
    ||||| ||||| |||||||||||| ||||||||||||||||    
T  8346524 tataagaaatcgtaaaatcgcaattaaaatcgatggatttt 8346564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 164
Target Start/End: Complemental strand, 17811485 - 17811445
Alignment:
Q  124 tataaaaaatcataaaatcgcaatcaaaatcgatggatttt 164  Q
    ||||| ||||| |||||||||||||||||||||| ||||||    
T  17811485 tataagaaatcgtaaaatcgcaatcaaaatcgatcgatttt 17811445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 164
Target Start/End: Original strand, 20570876 - 20570916
Alignment:
Q  124 tataaaaaatcataaaatcgcaatcaaaatcgatggatttt 164  Q
    ||||| ||||| |||||| ||||||||||||||||||||||    
T  20570876 tataagaaatcgtaaaattgcaatcaaaatcgatggatttt 20570916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 164
Target Start/End: Original strand, 24990062 - 24990102
Alignment:
Q  124 tataaaaaatcataaaatcgcaatcaaaatcgatggatttt 164  Q
    ||||| ||||| |||||| ||||||||||||||||||||||    
T  24990062 tataagaaatcgtaaaattgcaatcaaaatcgatggatttt 24990102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 115; Significance: 1e-58; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 11 - 224
Target Start/End: Original strand, 7489058 - 7489270
Alignment:
Q  11 aaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatt 110  Q
    ||||||||||||||| ||||||||||||||||| ||||| ||||  |||||| ||| ||||||||||||||||||| ||| || |||||||||||||| |    
T  7489058 aaggttgtcaaaatcaggactttacttcaagtcgaaaggaaatagcaaaattaggactcgtaaaatcgcaatcaaaatcggaggattttactcaaggact 7489157  T
Q  111 tttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacctnnnnnnnnntaatactaaatatatgttacaaatgatatatag 210  Q
    ||||||||||||||||| |||||  ||||||||||||||||||||||| |||||| ||         ||||||||||||||||||| |||||||||||||    
T  7489158 tttgtagaatcgatatagaaaattgtaaaatcgcaatcaaaatcgatgaatttta-ctcaaaaatattaatactaaatatatgttataaatgatatatag 7489256  T
Q  211 tcataaatgactta 224  Q
    ||||||||||||||    
T  7489257 tcataaatgactta 7489270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 11 - 227
Target Start/End: Complemental strand, 11879954 - 11879739
Alignment:
Q  11 aaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatt 110  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||  ||||| || | ||||||||||||||||||| |||||| |||||||  ||| | |    
T  11879954 aaggttgtcaaaatcgggattttacttcaggtcaaaagggaatagtaaaatcggaactcgtaaaatcgcaatcaaaatcgaaggattttacctaagaact 11879855  T
Q  111 tttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacctnnnnnnnnntaatactaaatatatgttacaaatgatatatag 210  Q
    ||| ||||||||||||| |||||  |||||||||| |||||||||||||||||||||          ||||||||||||||||||| ||||| |||||||    
T  11879854 tttatagaatcgatatagaaaattgtaaaatcgcattcaaaatcgatggattttacc-aaaaaataataatactaaatatatgttataaatggtatatag 11879756  T
Q  211 tcataaatgacttagtt 227  Q
    |||||||| ||||||||    
T  11879755 tcataaattacttagtt 11879739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 11 - 227
Target Start/End: Complemental strand, 11897370 - 11897155
Alignment:
Q  11 aaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatt 110  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||  ||||| || | ||||||||||||||||||| |||||| |||||||  ||| | |    
T  11897370 aaggttgtcaaaatcgggattttacttcaggtcaaaagggaatagtaaaatcggaactcgtaaaatcgcaatcaaaatcgaaggattttacctaagaact 11897271  T
Q  111 tttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacctnnnnnnnnntaatactaaatatatgttacaaatgatatatag 210  Q
    ||| ||||||||||||| |||||  |||||||||| |||||||||||||||||||||          ||||||||||||||||||| ||||| |||||||    
T  11897270 tttatagaatcgatatagaaaattgtaaaatcgcattcaaaatcgatggattttacc-aaaaaataataatactaaatatatgttataaatggtatatag 11897172  T
Q  211 tcataaatgacttagtt 227  Q
    |||||||| ||||||||    
T  11897171 tcataaattacttagtt 11897155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 26 - 223
Target Start/End: Original strand, 19704247 - 19704441
Alignment:
Q  26 gggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatttttgtagaatcgata 125  Q
    |||| ||||||||||||| ||||||||||  ||||| |||| ||||||||||||||||||| || ||| | |||||||||||| | ||||||||||||||    
T  19704247 gggattttacttcaagtccaaagggaatagcaaaatcgggactcgtaaaatcgcaatcaaaatcaaaggaatttactcaaggactgttgtagaatcgata 19704346  T
Q  126 taaaaaatcataaaatcgcaatcaaaatcgatggattttacctnnnnnnnnntaatactaaatatatgttacaaatgatatatagtcataaatgactt 223  Q
    |   ||||| ||||||| |||||||||||||||||||||||||          || ||||||||||||||||||||| ||||||||||||||| ||||    
T  19704347 tttgaaatcttaaaatcacaatcaaaatcgatggattttacctaaaaaaa---aaaactaaatatatgttacaaatggtatatagtcataaataactt 19704441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 9 - 224
Target Start/End: Complemental strand, 23142530 - 23142317
Alignment:
Q  9 caaaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaagga 108  Q
    ||||||||||||||||| |||||||| ||||| || ||||||||||  ||||  || | |||||||||||||||  || |||||  |||||| ||||  |    
T  23142530 caaaggttgtcaaaatcaggactttatttcaattcgaaagggaatagcaaaaccggtaatcgtaaaatcgcaatttaaatcgaatgattttagtcaaaaa 23142431  T
Q  109 tttttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacctnnnnnnnnntaatactaaatatatgttacaaatgatatat 208  Q
     ||||||||||||||||||| ||||  ||||||||||||||||||||||||| ||||||          ||||||||||||||||||| ||||| |||||    
T  23142430 cttttgtagaatcgatataagaaattgtaaaatcgcaatcaaaatcgatggactttacc--aaaaataataatactaaatatatgttataaatggtatat 23142333  T
Q  209 agtcataaatgactta 224  Q
    ||||||||||||||||    
T  23142332 agtcataaatgactta 23142317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 57 - 227
Target Start/End: Complemental strand, 15294977 - 15294809
Alignment:
Q  57 aaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatttttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcga 156  Q
    ||||| |||| || |||||||||||||||| |||||| |||||||||||| | |||||||||||| |||||| ||||| ||||||||||| ||||||| |    
T  15294977 aaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatccatataagaaatcttaaaatcgcaagcaaaatcca 15294878  T
Q  157 tggattttacctnnnnnnnnntaatactaaatatatgttacaaatgatatatagtcataaatgacttagtt 227  Q
    ||||||||||||         ||||||||||||||||||||||||  | ||||||||||||||||||||||    
T  15294877 tggattttacct--aaaaaaataatactaaatatatgttacaaatagtgtatagtcataaatgacttagtt 15294809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 57 - 227
Target Start/End: Complemental strand, 15475346 - 15475178
Alignment:
Q  57 aaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatttttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcga 156  Q
    ||||| |||| || |||||||||||||||| |||||| |||||||||||| | |||||||||||| |||||| ||||| ||||||||||| ||||||| |    
T  15475346 aaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatccatataagaaatcttaaaatcgcaagcaaaatcca 15475247  T
Q  157 tggattttacctnnnnnnnnntaatactaaatatatgttacaaatgatatatagtcataaatgacttagtt 227  Q
    ||||||||||||         ||||||||||||||||||||||||  | ||||||||||||||||||||||    
T  15475246 tggattttacct--aaaaaaataatactaaatatatgttacaaatagtgtatagtcataaatgacttagtt 15475178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 15 - 223
Target Start/End: Complemental strand, 45403379 - 45403172
Alignment:
Q  15 ttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatttttg 114  Q
    |||||||||||||||||||| |||| ||| ||||||||||  ||||| | || ||||||||||||||||||| |||||| |||||||| || || |||||    
T  45403379 ttgtcaaaatcgggactttatttcacgtcgaaagggaatagcaaaatcgagactcgtaaaatcgcaatcaaaatcgaaggattttacttaaagacttttg 45403280  T
Q  115 tagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacctnnnnnnnnntaatactaaatatatgttacaaatgatatatagtcat 214  Q
    |||||||||||||  ||||  ||||| |||||||||||||||| |||||||||          ||||| ||||||||||||| ||||| |||||  ||||    
T  45403279 tagaatcgatataggaaattgtaaaa-cgcaatcaaaatcgatagattttaccaaaaaaataataatattaaatatatgttataaatggtatattatcat 45403181  T
Q  215 aaatgactt 223  Q
    |||||||||    
T  45403180 aaatgactt 45403172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 13 - 221
Target Start/End: Complemental strand, 5922400 - 5922194
Alignment:
Q  13 ggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatttt 112  Q
    ||||||||||||||||||||||||||| ||| ||||||||||  |||||  | |   ||| ||||||||||||| |||||| |||||||||||| | |||    
T  5922400 ggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttt 5922301  T
Q  113 tgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacctnnnnnnnnntaatactaaatatatgttacaaatgatatatagtc 212  Q
    |||||||||||||||  ||||  |||||||||||||  |||||||||||||||||          |||||||||||||||||||  |||| |||||||||    
T  5922300 tgtagaatcgatataggaaattgtaaaatcgcaatc-taatcgatggattttacc-caaaaaatttaatactaaatatatgttatgaatggtatatagtc 5922203  T
Q  213 ataaatgac 221  Q
    |||||||||    
T  5922202 ataaatgac 5922194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 11 - 227
Target Start/End: Complemental strand, 6811173 - 6810960
Alignment:
Q  11 aaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatt 110  Q
    ||||||||||||||||| |||||  ||||| || |||| ||| |  ||||| |  | |||||||||||||| |||| ||||||||||||| ||||  | |    
T  6811173 aaggttgtcaaaatcggaactttgtttcaaatcgaaagagaagagcaaaatcgacaatcgtaaaatcgcaaccaaaatcgaagaattttaatcaactact 6811074  T
Q  111 tttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacctnnnnnnnnntaatactaaatatatgttacaaatgatatatag 210  Q
    |||||||||| ||||||| ||||   |||||||||||||||||||||||||||||||          ||||||||||||||||||| |||||||||||||    
T  6811073 tttgtagaatagatataagaaat-tgaaaatcgcaatcaaaatcgatggattttacc--aaaaaaaataatactaaatatatgttataaatgatatatag 6810977  T
Q  211 tcataaatgacttagtt 227  Q
    | |||||||||||||||    
T  6810976 ttataaatgacttagtt 6810960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 11 - 166
Target Start/End: Original strand, 24414062 - 24414217
Alignment:
Q  11 aaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatt 110  Q
    |||||||||||||| || ||||||||||| ||| ||||||||||  ||||||  || ||||||||||||||||||| |||||| |||||||||||| |||    
T  24414062 aaggttgtcaaaattggaactttacttcatgtcgaaagggaatagcaaaatttagactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaatt 24414161  T
Q  111 tttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttac 166  Q
    |||||||||||||||||  ||||  |||||||  ||||||| || ||| |||||||    
T  24414162 tttgtagaatcgatataggaaattgtaaaatcctaatcaaattcaatgaattttac 24414217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 11 - 220
Target Start/End: Original strand, 29384087 - 29384300
Alignment:
Q  11 aaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatt 110  Q
    ||||||||||||||||||| ||| ||||| ||| ||||  || | |||||| |  | |||||||||||||| |||| |||||| |||||||||||  | |    
T  29384087 aaggttgtcaaaatcgggattttgcttcaggtcgaaagaaaagagaaaaatcgacaatcgtaaaatcgcaaccaaaatcgaaggattttactcaactact 29384186  T
Q  111 tttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacc----tnnnnnnnnntaatactaaatatatgttacaaatgatat 206  Q
    ||||||||||  |||||| ||||| ||||||||||||||||||||||||||||||||              ||||||||||||||||||| ||||| |||    
T  29384187 tttgtagaattaatataagaaatcgtaaaatcgcaatcaaaatcgatggattttaccaaaaaaaaaaatactaatactaaatatatgttataaatggtat 29384286  T
Q  207 atagtcataaatga 220  Q
    ||||||||||||||    
T  29384287 atagtcataaatga 29384300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 11 - 167
Target Start/End: Original strand, 15761133 - 15761289
Alignment:
Q  11 aaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatt 110  Q
    |||||||| ||||| |||| ||| ||||||| | |||||||| |   |||||| || |||||||||||||||  || |||||| |||||||||||  | |    
T  15761133 aaggttgttaaaattgggattttgcttcaagccgaaagggaagaatgaaattgagaatcgtaaaatcgcaatataaatcgaaggattttactcaattact 15761232  T
Q  111 tttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacc 167  Q
    |||||||||||||||||| || |  ||||||||||||||||||||||||||||||||    
T  15761233 tttgtagaatcgatataagaagtagtaaaatcgcaatcaaaatcgatggattttacc 15761289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 9 - 165
Target Start/End: Complemental strand, 17647353 - 17647197
Alignment:
Q  9 caaaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaagga 108  Q
    |||||||||| |||||||||| ||| ||||| ||| |||| ||  |  ||||| |  | || |||||||||||||||| |||||| |||||||||||  |    
T  17647353 caaaggttgttaaaatcgggattttgcttcaggtcgaaagagatgagcaaaatcgacaatcataaaatcgcaatcaaaatcgaaggattttactcaacta 17647254  T
Q  109 tttttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggatttta 165  Q
     ||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||    
T  17647253 gttttgtagaatcgatataagaaattgtaaaatcgcaatcaaaatcgatggatttta 17647197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 18 - 120
Target Start/End: Complemental strand, 16752370 - 16752268
Alignment:
Q  18 tcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatttttgtag 117  Q
    ||||||| || ||||||||||||||| ||||||| ||  |||||||||| |||||||||||||| |||| |||||| |||||||||||||| ||||||||    
T  16752370 tcaaaattggaactttacttcaagtcgaaagggagtagcaaaattgggactcgtaaaatcgcaaacaaaatcgaaggattttactcaaggaattttgtag 16752271  T
Q  118 aat 120  Q
    |||    
T  16752270 aat 16752268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 68 - 226
Target Start/End: Complemental strand, 32424631 - 32424472
Alignment:
Q  68 tcgtaaaatcgcaatcaaattcgaagaattttactcaaggatttttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacc 167  Q
    ||||||||||||||| ||| |||||| |||||||||||||| |||||||||||||| |||  ||||  |||||||||||| ||||||||| ||||||| |    
T  32424631 tcgtaaaatcgcaattaaaatcgaaggattttactcaaggagttttgtagaatcgagataggaaattgtaaaatcgcaataaaaatcgatagattttatc 32424532  T
Q  168 tnnnnnnnnntaatactaa--atatatgttacaaatgatatatagtcataaatgacttagt 226  Q
              |||||||||  |||||||||| ||||| |||||||||||||||||||||||    
T  32424531 -cagaaaaattaatactaaatatatatgttataaatggtatatagtcataaatgacttagt 32424472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 11 - 128
Target Start/End: Original strand, 40541595 - 40541712
Alignment:
Q  11 aaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatt 110  Q
    |||||| |||||||||||||||||||||||||| ||||| | ||  ||||| |||| ||||||||||||||||||| | |||  |||||| ||||||| |    
T  40541595 aaggttatcaaaatcgggactttacttcaagtcgaaaggaagtagcaaaatcgggactcgtaaaatcgcaatcaaaattgaaagattttattcaaggact 40541694  T
Q  111 tttgtagaatcgatataa 128  Q
    | ||||||||||||||||    
T  40541695 tctgtagaatcgatataa 40541712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 20 - 124
Target Start/End: Complemental strand, 2040464 - 2040360
Alignment:
Q  20 aaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatttttgtagaa 119  Q
    |||||||||||||||||||||||| |||| || ||  ||||| || | ||||||||||||||||||| |||||| |||||||||| ||| ||||||||||    
T  2040464 aaaatcgggactttacttcaagtcgaaagagagtagcaaaatcggaactcgtaaaatcgcaatcaaaatcgaaggattttactcatggacttttgtagaa 2040365  T
Q  120 tcgat 124  Q
    |||||    
T  2040364 tcgat 2040360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 11 - 150
Target Start/End: Complemental strand, 17566452 - 17566313
Alignment:
Q  11 aaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatt 110  Q
    |||||| | |||||| ||| ||| ||||| |||||||||||| |  |||||||  | ||||||||| ||||||||| ||||||||||||||||||  | |    
T  17566452 aaggtttttaaaatcaggattttgcttcaggtcaaaagggaagagcaaaattgaaaatcgtaaaattgcaatcaaaatcgaagaattttactcaactact 17566353  T
Q  111 tttgtagaatcgatataaaaaatcataaaatcgcaatcaa 150  Q
    |||||||||  ||||||| ||||  |||||||||||||||    
T  17566352 tttgtagaacagatataagaaattgtaaaatcgcaatcaa 17566313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 11 - 158
Target Start/End: Original strand, 22909979 - 22910125
Alignment:
Q  11 aaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatt 110  Q
    ||||||||||||||||| | ||||| ||| ||| |||| ||| | |||||| |  | |||||||||||||| | || | |||| |||||| ||||  |||    
T  22909979 aaggttgtcaaaatcgg-attttacatcatgtcgaaagagaagagaaaaatcgacaatcgtaaaatcgcaaccgaaattgaaggattttattcaactatt 22910077  T
Q  111 tttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatg 158  Q
    |||||||||||||||||| ||||| |||||||||||||||| ||||||    
T  22910078 tttgtagaatcgatataagaaatcgtaaaatcgcaatcaaagtcgatg 22910125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 57 - 118
Target Start/End: Original strand, 27836120 - 27836181
Alignment:
Q  57 aaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatttttgtaga 118  Q
    |||||| ||||||||||||||||||||||| |||||| |||||||||||||| |||||||||    
T  27836120 aaaattaggattcgtaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtaga 27836181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 14 - 165
Target Start/End: Original strand, 24056348 - 24056499
Alignment:
Q  14 gttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggattttt 113  Q
    |||||||||| || || ||| ||||| ||| |||||||| |  |||||||    || |||||| | ||||||| |||||| |||||||||||  | ||||    
T  24056348 gttgtcaaaaccgagattttgcttcaggtcgaaagggaagagcaaaattgaatatcataaaatggtaatcaaaatcgaaggattttactcaactagtttt 24056447  T
Q  114 gtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggatttta 165  Q
    |||||||| |||||| ||||  |||||||||||||| ||||||| |||||||    
T  24056448 gtagaatcaatataacaaatgttaaaatcgcaatcataatcgatagatttta 24056499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 179 - 227
Target Start/End: Original strand, 3094185 - 3094233
Alignment:
Q  179 aatactaaatatatgttacaaatgatatatagtcataaatgacttagtt 227  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  3094185 aatactaaatatatgttataaatggtatatagtcataaatgacttagtt 3094233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 151
Target Start/End: Complemental strand, 15231975 - 15231835
Alignment:
Q  11 aaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatt 110  Q
    |||||||| ||| ||| || ||| ||||||||| |||| ||| |  ||||| |  | ||||||||||||||  ||| ||| |  |||||||||||  | |    
T  15231975 aaggttgttaaattcgagattttgcttcaagtcgaaagagaagagcaaaatcgacaatcgtaaaatcgcaactaaaatcgtacgattttactcaactact 15231876  T
Q  111 tttgtagaatcgatataaaaaatcataaaatcgcaatcaaa 151  Q
    |||||||||||||||||||||||  ||||||||||||||||    
T  15231875 tttgtagaatcgatataaaaaattgtaaaatcgcaatcaaa 15231835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 57 - 121
Target Start/End: Complemental strand, 7262070 - 7262006
Alignment:
Q  57 aaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatttttgtagaatc 121  Q
    ||||| |||| ||||||||||||||||||| |  ||| |||||||||||||| ||||||||||||    
T  7262070 aaaatcgggactcgtaaaatcgcaatcaaaattaaaggattttactcaaggacttttgtagaatc 7262006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 95 - 167
Target Start/End: Complemental strand, 8582313 - 8582241
Alignment:
Q  95 attttactcaaggatttttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacc 167  Q
    |||||||||||  | ||||||||||| ||||||| ||||| ||||||  ||||||||||||||| ||||||||    
T  8582313 attttactcaactacttttgtagaattgatataagaaatcgtaaaattacaatcaaaatcgatgaattttacc 8582241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 179 - 227
Target Start/End: Original strand, 27836406 - 27836454
Alignment:
Q  179 aatactaaatatatgttacaaatgatatatagtcataaatgacttagtt 227  Q
    ||||||||||| |||||| ||||| ||||||||||||||||||||||||    
T  27836406 aatactaaatacatgttataaatggtatatagtcataaatgacttagtt 27836454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 164
Target Start/End: Original strand, 3094247 - 3094284
Alignment:
Q  127 aaaaaatcataaaatcgcaatcaaaatcgatggatttt 164  Q
    |||||||| |||||||||||||||||||||||||||||    
T  3094247 aaaaaatcgtaaaatcgcaatcaaaatcgatggatttt 3094284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 164
Target Start/End: Original strand, 9212246 - 9212286
Alignment:
Q  124 tataaaaaatcataaaatcgcaatcaaaatcgatggatttt 164  Q
    ||||| ||||| |||||||||||||||||||||||||||||    
T  9212246 tataagaaatcttaaaatcgcaatcaaaatcgatggatttt 9212286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 227
Target Start/End: Complemental strand, 31424350 - 31424302
Alignment:
Q  179 aatactaaatatatgttacaaatgatatatagtcataaatgacttagtt 227  Q
    |||||||||||||||||| || || |||||||||||||| |||||||||    
T  31424350 aatactaaatatatgttataattggtatatagtcataaacgacttagtt 31424302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 166
Target Start/End: Complemental strand, 17647296 - 17647261
Alignment:
Q  131 aatcataaaatcgcaatcaaaatcgatggattttac 166  Q
    |||||||||||||||||||||||||| |||||||||    
T  17647296 aatcataaaatcgcaatcaaaatcgaaggattttac 17647261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 64
Target Start/End: Complemental strand, 19335329 - 19335276
Alignment:
Q  11 aaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgg 64  Q
    ||||||||||||||||||||||||||| | ||||||| | ||||  ||||||||    
T  19335329 aaggttgtcaaaatcgggactttactttaggtcaaaaagaaatagtaaaattgg 19335276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 167
Target Start/End: Original strand, 30240260 - 30240301
Alignment:
Q  126 taaaaaatcataaaatcgcaatcaaaatcgatggattttacc 167  Q
    ||||||||| |||||||||||||||||| |||||||| ||||    
T  30240260 taaaaaatcgtaaaatcgcaatcaaaattgatggattctacc 30240301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 164
Target Start/End: Complemental strand, 45403160 - 45403127
Alignment:
Q  131 aatcataaaatcgcaatcaaaatcgatggatttt 164  Q
    |||| |||||||||||||||||||||||||||||    
T  45403160 aatcgtaaaatcgcaatcaaaatcgatggatttt 45403127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 164
Target Start/End: Complemental strand, 5922187 - 5922147
Alignment:
Q  124 tataaaaaatcataaaatcgcaatcaaaatcgatggatttt 164  Q
    ||||| |||||  ||||||||||||||||||||||||||||    
T  5922187 tataagaaatcgcaaaatcgcaatcaaaatcgatggatttt 5922147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 164
Target Start/End: Complemental strand, 11879738 - 11879698
Alignment:
Q  124 tataaaaaatcataaaatcgcaatcaaaatcgatggatttt 164  Q
    ||||| ||||| ||||||||||||||||||||||| |||||    
T  11879738 tataagaaatcgtaaaatcgcaatcaaaatcgatgaatttt 11879698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 164
Target Start/End: Complemental strand, 11897154 - 11897114
Alignment:
Q  124 tataaaaaatcataaaatcgcaatcaaaatcgatggatttt 164  Q
    ||||| ||||| ||||||||||||||||||||||| |||||    
T  11897154 tataagaaatcgtaaaatcgcaatcaaaatcgatgaatttt 11897114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 164
Target Start/End: Complemental strand, 15294796 - 15294768
Alignment:
Q  136 taaaatcgcaatcaaaatcgatggatttt 164  Q
    |||||||||||||||||||||||||||||    
T  15294796 taaaatcgcaatcaaaatcgatggatttt 15294768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 164
Target Start/End: Complemental strand, 15475165 - 15475137
Alignment:
Q  136 taaaatcgcaatcaaaatcgatggatttt 164  Q
    |||||||||||||||||||||||||||||    
T  15475165 taaaatcgcaatcaaaatcgatggatttt 15475137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 164
Target Start/End: Original strand, 19704446 - 19704486
Alignment:
Q  124 tataaaaaatcataaaatcgcaatcaaaatcgatggatttt 164  Q
    ||||| ||||| |||||| ||||||||||||||||||||||    
T  19704446 tataagaaatcgtaaaattgcaatcaaaatcgatggatttt 19704486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 164
Target Start/End: Original strand, 22910193 - 22910233
Alignment:
Q  124 tataaaaaatcataaaatcgcaatcaaaatcgatggatttt 164  Q
    ||||| ||||| ||||||||||||||||||| |||||||||    
T  22910193 tataagaaatcttaaaatcgcaatcaaaatcaatggatttt 22910233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 164
Target Start/End: Complemental strand, 23142313 - 23142273
Alignment:
Q  124 tataaaaaatcataaaatcgcaatcaaaatcgatggatttt 164  Q
    ||||| ||||| ||||||||||||||||||||||| |||||    
T  23142313 tataagaaatcgtaaaatcgcaatcaaaatcgatgaatttt 23142273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 164
Target Start/End: Complemental strand, 31424301 - 31424261
Alignment:
Q  124 tataaaaaatcataaaatcgcaatcaaaatcgatggatttt 164  Q
    ||||| ||||| ||||||||||||||||||| |||||||||    
T  31424301 tataagaaatcgtaaaatcgcaatcaaaatcaatggatttt 31424261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 114; Significance: 6e-58; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 11 - 227
Target Start/End: Complemental strand, 19748687 - 19748472
Alignment:
Q  11 aaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatt 110  Q
    |||||||||||||||||||||||| |||| ||  ||||||||||  ||||| |||||||||||||||||||||||| |||||| |||||||||||||| |    
T  19748687 aaggttgtcaaaatcgggactttaattcaggttgaaagggaatagcaaaatcgggattcgtaaaatcgcaatcaaaatcgaaggattttactcaaggact 19748588  T
Q  111 tttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacctnnnnnnnnntaatactaaatatatgttacaaatgatatatag 210  Q
    |||||||||||||||||  ||||  ||||||||||||||||||||||||||||||||          ||||||||||||||| ||| |||||||||||||    
T  19748587 tttgtagaatcgatataggaaattgtaaaatcgcaatcaaaatcgatggattttacc-agaaaataataatactaaatatattttataaatgatatatag 19748489  T
Q  211 tcataaatgacttagtt 227  Q
    || ||||||||||||||    
T  19748488 tcttaaatgacttagtt 19748472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 11 - 227
Target Start/End: Complemental strand, 17103549 - 17103334
Alignment:
Q  11 aaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatt 110  Q
    ||||||||||||||||||||||||||||||||| ||||||||||  |||||  ||| ||||||||||||||||||   ||||| |||||||||||||| |    
T  17103549 aaggttgtcaaaatcgggactttacttcaagtcgaaagggaataacaaaatcaggactcgtaaaatcgcaatcaataccgaaggattttactcaaggact 17103450  T
Q  111 tttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacctnnnnnnnnntaatactaaatatatgttacaaatgatatatag 210  Q
    |||||||||||||||||  ||||  |||||||||||||||||||||||||||||||||         ||||| ||||||||||| | |||||||||||||    
T  17103449 tttgtagaatcgatataggaaattgtaaaatcgcaatcaaaatcgatggattttacct-aaaaaaattaataataaatatatgtcataaatgatatatag 17103351  T
Q  211 tcataaatgacttagtt 227  Q
    || ||||| ||||||||    
T  17103350 tcgtaaataacttagtt 17103334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 6 - 224
Target Start/End: Original strand, 7918120 - 7918335
Alignment:
Q  6 tagcaaaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaa 105  Q
    |||| |||||||||||||||||| |||||||||| ||| ||||||||||  | |||  ||| ||||||||| ||||||||| ||||||||||||||||||    
T  7918120 tagccaaggttgtcaaaatcggggctttacttcaggtcgaaagggaatagcagaatcaggactcgtaaaattgcaatcaaaatcgaagaattttactcaa 7918219  T
Q  106 ggatttttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacctnnnnnnnnntaatactaaatatatgttacaaatgata 205  Q
    ||| |||||||||||| |||||  ||||  ||||||||||||||||||||||||||||||||          ||||||||||| ||||||| ||||||||    
T  7918220 ggacttttgtagaatcaatataggaaattgtaaaatcgcaatcaaaatcgatggattttacc---aaaaaaataatactaaatttatgttataaatgata 7918316  T
Q  206 tatagtcataaatgactta 224  Q
    |||||||||||||||||||    
T  7918317 tatagtcataaatgactta 7918335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 11 - 227
Target Start/End: Complemental strand, 7223869 - 7223651
Alignment:
Q  11 aaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatt 110  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||  ||||| |||| ||||||||| ||||||||| |||||| |||||||||||||| |    
T  7223869 aaggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaattgcaatcaaaatcgaaggattttactcaaggact 7223770  T
Q  111 tttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacctnnnnnnnnntaatacta----aatatatgttacaaatgatat 206  Q
    |||||||||||||||||  ||||  |||||||||||||| |||| ||||||||||||          ||||||||    ||||||||||| ||||| |||    
T  7223769 tttgtagaatcgatataggaaattgtaaaatcgcaatcagaatcaatggattttacc--aaacaaaataatactaaattaatatatgttataaatggtat 7223672  T
Q  207 atagtcataaatgacttagtt 227  Q
    |||||||||||||||||||||    
T  7223671 atagtcataaatgacttagtt 7223651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 11 - 167
Target Start/End: Original strand, 11327337 - 11327493
Alignment:
Q  11 aaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatt 110  Q
    |||||||||||||||||| |||||||||| ||  ||||||||||  ||||| | || ||||||||||||||||||| ||||||||||||||||||||| |    
T  11327337 aaggttgtcaaaatcggggctttacttcaggttgaaagggaatagcaaaatcgagactcgtaaaatcgcaatcaaaatcgaagaattttactcaaggact 11327436  T
Q  111 tttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacc 167  Q
    |||||||||||||||||  ||||  ||||||||||| ||||||||||||||||||||    
T  11327437 tttgtagaatcgatataggaaattgtaaaatcgcaaccaaaatcgatggattttacc 11327493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 11 - 167
Target Start/End: Original strand, 22498215 - 22498371
Alignment:
Q  11 aaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatt 110  Q
    |||||||||||||| |||||||||||||| ||| ||||||||||  |||||||||| ||||||||||||||||||| | |||  ||||||||||| || |    
T  22498215 aaggttgtcaaaattgggactttacttcaggtcgaaagggaatagcaaaattgggactcgtaaaatcgcaatcaaaattgaacgattttactcaaagact 22498314  T
Q  111 tttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacc 167  Q
    |||||||||||||||||  ||||  ||||||||||||||||||||||||||||||||    
T  22498315 tttgtagaatcgatataggaaattgtaaaatcgcaatcaaaatcgatggattttacc 22498371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 4 - 227
Target Start/End: Original strand, 26053065 - 26053286
Alignment:
Q  4 agtagcaaaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactc 103  Q
    |||||||||| ||||||||||| ||||||||||||| ||| ||||| ||||  |||||||||| |||||||||| |||||||| |||||  |||||||||    
T  26053065 agtagcaaag-ttgtcaaaatcaggactttacttcaggtcgaaaggaaatagcaaaattgggactcgtaaaatcccaatcaaaatcgaatgattttactc 26053163  T
Q  104 aaggatttttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacctnnnnnnnnntaatactaaatatatgttacaaatga 203  Q
    || || |||||||||||||||||   ||||  ||||||||||||||||||||||||||||||||          ||||||||| ||||||||| |||||     
T  26053164 aatgacttttgtagaatcgatattggaaattgtaaaatcgcaatcaaaatcgatggattttacc-aaaaaataataatactaactatatgttataaatgg 26053262  T
Q  204 tatatagtcataaatgacttagtt 227  Q
    ||||||||||||||| ||||||||    
T  26053263 tatatagtcataaataacttagtt 26053286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 4 - 227
Target Start/End: Original strand, 26073118 - 26073339
Alignment:
Q  4 agtagcaaaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactc 103  Q
    |||||||||| ||||||||||| ||||||||||||| ||| ||||| ||||  |||||||||| |||||||||| |||||||| |||||  |||||||||    
T  26073118 agtagcaaag-ttgtcaaaatcaggactttacttcaggtcgaaaggaaatagcaaaattgggactcgtaaaatcccaatcaaaatcgaatgattttactc 26073216  T
Q  104 aaggatttttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacctnnnnnnnnntaatactaaatatatgttacaaatga 203  Q
    || || |||||||||||||||||   ||||  ||||||||||||||||||||||||||||||||          ||||||||| ||||||||| |||||     
T  26073217 aatgacttttgtagaatcgatattggaaattgtaaaatcgcaatcaaaatcgatggattttacc-aaaaaataataatactaactatatgttataaatgg 26073315  T
Q  204 tatatagtcataaatgacttagtt 227  Q
    ||||||||||||||| ||||||||    
T  26073316 tatatagtcataaataacttagtt 26073339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 11 - 167
Target Start/End: Original strand, 17543505 - 17543661
Alignment:
Q  11 aaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatt 110  Q
    |||||||| ||||| |||||||||||||| ||| ||| ||||||  ||||| |||| || |||||||| ||||||| |||||| |||||||||||||| |    
T  17543505 aaggttgttaaaattgggactttacttcaggtcgaaaaggaatagcaaaatcgggactcataaaatcgaaatcaaaatcgaaggattttactcaaggact 17543604  T
Q  111 tttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacc 167  Q
    ||||||||||||||||   ||||  ||||||||||||||||||||||||||||||||    
T  17543605 tttgtagaatcgatattggaaattgtaaaatcgcaatcaaaatcgatggattttacc 17543661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 18 - 227
Target Start/End: Original strand, 15527892 - 15528100
Alignment:
Q  18 tcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatttttgtag 117  Q
    ||||||||  |||||||||||| ||| ||||| ||||  ||||| || | ||| ||||||||||||||| |||||| |||||||||||||| ||||||||    
T  15527892 tcaaaatcctgactttacttcaggtcgaaaggaaatagcaaaatcggaactcggaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtag 15527991  T
Q  118 aatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacctnnnnnnnnntaatactaaatatatgttacaaatgatatatagtcataaa 217  Q
    ||||||||||  ||||  ||||||||||||| ||||||||||| ||| ||          ||||||||||||||||||| ||||| |||||||| |||||    
T  15527992 aatcgatataggaaattgtaaaatcgcaatcgaaatcgatgga-tttcccccaaaaaatttaatactaaatatatgttataaatggtatatagttataaa 15528090  T
Q  218 tgacttagtt 227  Q
    ||||||||||    
T  15528091 tgacttagtt 15528100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 11 - 167
Target Start/End: Original strand, 27233074 - 27233230
Alignment:
Q  11 aaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatt 110  Q
    |||||||||||||||| | |||||||||| |||||||||||||   ||||| |||| || |||||||||||||||| | |||| |||||||||||||  |    
T  27233074 aaggttgtcaaaatcgagcctttacttcaggtcaaaagggaatgacaaaatcgggactcataaaatcgcaatcaaaattgaaggattttactcaaggtct 27233173  T
Q  111 tttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacc 167  Q
    || ||||||||| |||| |||||  |||||||||||||||||||||| |||||||||    
T  27233174 ttagtagaatcgctatagaaaattgtaaaatcgcaatcaaaatcgatagattttacc 27233230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 10 - 167
Target Start/End: Original strand, 3573673 - 3573831
Alignment:
Q  10 aaaggttgtcaaaatcgggactttacttcaagtc-aaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaagga 108  Q
    |||||||||||||||||||||||||||||| ||| |||||||||||  |||||  ||| ||||||||||||||||||| ||| || | |||||||||  |    
T  3573673 aaaggttgtcaaaatcgggactttacttcaggtcgaaaagggaatagcaaaatcaggactcgtaaaatcgcaatcaaaatcgtaggaatttactcaacta 3573772  T
Q  109 tttttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacc 167  Q
     | ||||||||| ||||||| ||||  |||||||||||||||||||||||  |||||||    
T  3573773 ctcttgtagaatagatataagaaattgtaaaatcgcaatcaaaatcgatgagttttacc 3573831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 15 - 227
Target Start/End: Complemental strand, 23898160 - 23897950
Alignment:
Q  15 ttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatttttg 114  Q
    ||||||||||||||| ||| ||||| ||| || | ||| |  ||||| |  | ||||||||||| || |||| |||||| |||||||||||  | ||| |    
T  23898160 ttgtcaaaatcgggattttgcttcaggtcgaatgagaagagcaaaatcgacaatcgtaaaatcgaaaccaaaatcgaaggattttactcaactacttt-g 23898062  T
Q  115 tagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacctnnnnnnnnntaatactaaatatatgttacaaatgatatatagtcat 214  Q
    |||||||||||||| ||||  ||||||| ||||||||||||||||||||||||           |||||||||||||||||| ||||| |||||||||||    
T  23898061 tagaatcgatataagaaattgtaaaatctcaatcaaaatcgatggattttacc-aaaaaaaaaaaatactaaatatatgttataaatggtatatagtcat 23897963  T
Q  215 aaatgacttagtt 227  Q
    |||||||||||||    
T  23897962 aaatgacttagtt 23897950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 11 - 127
Target Start/End: Complemental strand, 27890740 - 27890624
Alignment:
Q  11 aaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatt 110  Q
    |||||||||||| ||| |||||||||||||||  ||||||| ||  |||||||| | ||||||||||| ||||||| | |||| |||||||||||||| |    
T  27890740 aaggttgtcaaattcgagactttacttcaagttgaaagggagtagtaaaattggaactcgtaaaatcgtaatcaaaattgaaggattttactcaaggact 27890641  T
Q  111 tttgtagaatcgatata 127  Q
    |||||||||||||||||    
T  27890640 tttgtagaatcgatata 27890624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 11 - 227
Target Start/End: Original strand, 30912181 - 30912402
Alignment:
Q  11 aaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatt 110  Q
    ||||||||||||||||| | ||| ||||| ||  |||| |||||  ||||| |  | |||||||||| ||| |||| | |||| |||||| ||||  | |    
T  30912181 aaggttgtcaaaatcggaattttgcttcaggttgaaagagaatagcaaaatcgataatcgtaaaatctcaaccaaaattgaaggattttattcaactact 30912280  T
Q  111 tttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttac-----ctnnnnnnnnntaatactaaatatatgttacaaatgata 205  Q
    |||||| ||||||||||| |||||||| ||||||||||| ||||||||||||||||     |          ||||||||||||||||| | ||||||||    
T  30912281 tttgtaaaatcgatataagaaatcatagaatcgcaatcataatcgatggattttacttttaccacaaaaaaataatactaaatatatgtgataaatgata 30912380  T
Q  206 tatagtcataaatgacttagtt 227  Q
    |||| |||||||||||||||||    
T  30912381 tataatcataaatgacttagtt 30912402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 11 - 167
Target Start/End: Complemental strand, 17250411 - 17250254
Alignment:
Q  11 aaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattc--gaagaattttactcaagga 108  Q
    |||||| |||||||||||||||||||||| ||| ||||| |||    || |||||| ||||||||||||||||||| |   |||| |||||||||||||     
T  17250411 aaggttatcaaaatcgggactttacttcaggtcgaaaggaaatggcgaa-ttgggactcgtaaaatcgcaatcaaaataaagaaggattttactcaaggt 17250313  T
Q  109 tttttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacc 167  Q
     ||| |||||||||  ||| |||||  |||| |||||||||||||| ||||||||||||    
T  17250312 ctttagtagaatcgccatagaaaattgtaaattcgcaatcaaaatcaatggattttacc 17250254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 72 - 167
Target Start/End: Original strand, 4841665 - 4841760
Alignment:
Q  72 aaaatcgcaatcaaattcgaagaattttactcaaggatttttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacc 167  Q
    |||||| |||||||| || ||| |||||||||||  | |||||||||||||  |||| ||||| ||||||||||||||||||||||| ||||||||    
T  4841665 aaaatcacaatcaaaatcaaaggattttactcaactacttttgtagaatcgggataagaaatcgtaaaatcgcaatcaaaatcgatgtattttacc 4841760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 11 - 91
Target Start/End: Complemental strand, 21355029 - 21354949
Alignment:
Q  11 aaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcga 91  Q
    |||||||||||||| |||| ||||||||||||  |||||||||| ||||||  ||| ||||||||||||||||||| ||||    
T  21355029 aaggttgtcaaaattgggattttacttcaagttgaaagggaatagaaaaatcaggactcgtaaaatcgcaatcaaaatcga 21354949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 16 - 116
Target Start/End: Complemental strand, 31108504 - 31108404
Alignment:
Q  16 tgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatttttgt 115  Q
    |||||||||| ||||||||||||| ||| ||||||||||  ||||| | ||||||||||| |||||||||| || ||  |||||||| ||||| ||||||    
T  31108504 tgtcaaaatcaggactttacttcaggtcgaaagggaatagcaaaatcgagattcgtaaaaccgcaatcaaaatcaaaagattttactaaaggacttttgt 31108405  T
Q  116 a 116  Q
    |    
T  31108404 a 31108404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 14 - 105
Target Start/End: Original strand, 27614434 - 27614525
Alignment:
Q  14 gttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaa 105  Q
    |||||||||||  ||| ||||||||| ||| ||||||||||  ||||| |||| |||||||||| |||||||| |||||| |||||||||||    
T  27614434 gttgtcaaaattaggaatttacttcaggtcgaaagggaatagtaaaatcgggactcgtaaaatcacaatcaaaatcgaaggattttactcaa 27614525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 136 - 227
Target Start/End: Complemental strand, 21354969 - 21354879
Alignment:
Q  136 taaaatcgcaatcaaaatcgatggattttacctnnnnnnnnntaatactaaatatatgttacaaatgatatatagtcataaatgacttagtt 227  Q
    |||||||||||||||||||||||||||| |||          ||||||||||||||||||| ||||| ||||||||||||||| ||||||||    
T  21354969 taaaatcgcaatcaaaatcgatggatttcacc-caaataatttaatactaaatatatgttataaatggtatatagtcataaattacttagtt 21354879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 110 - 165
Target Start/End: Original strand, 10508891 - 10508946
Alignment:
Q  110 ttttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggatttta 165  Q
    ||||||||||||||||||| ||||  |||||||||||||||||| |||||||||||    
T  10508891 ttttgtagaatcgatataagaaattgtaaaatcgcaatcaaaattgatggatttta 10508946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 68 - 166
Target Start/End: Original strand, 2912093 - 2912191
Alignment:
Q  68 tcgtaaaatcgcaatcaaattcgaagaattttactcaaggatttttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttac 166  Q
    ||||||||||  |||| || | |||| |||||||||||  | ||||||||||| | ||||| ||||  ||||||||||||||||||||| |||||||||    
T  2912093 tcgtaaaatcataatcgaaattgaaggattttactcaactacttttgtagaattgttataagaaattgtaaaatcgcaatcaaaatcgacggattttac 2912191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 178 - 227
Target Start/End: Original strand, 17543681 - 17543730
Alignment:
Q  178 taatactaaatatatgttacaaatgatatatagtcataaatgacttagtt 227  Q
    ||||||||||||||||||| ||||| ||||||||| ||||||||||||||    
T  17543681 taatactaaatatatgttataaatggtatatagtcgtaaatgacttagtt 17543730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 123 - 164
Target Start/End: Original strand, 27233267 - 27233308
Alignment:
Q  123 atataaaaaatcataaaatcgcaatcaaaatcgatggatttt 164  Q
    |||||| |||||||||||||||||||||||||||||||||||    
T  27233267 atataagaaatcataaaatcgcaatcaaaatcgatggatttt 27233308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 68 - 127
Target Start/End: Original strand, 20432425 - 20432484
Alignment:
Q  68 tcgtaaaatcgcaatcaaattcgaagaattttactcaaggatttttgtagaatcgatata 127  Q
    ||||||||||||||||||| | ||||||||||||| ||  | ||||||||||||||||||    
T  20432425 tcgtaaaatcgcaatcaaaattgaagaattttacttaactagttttgtagaatcgatata 20432484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 128
Target Start/End: Original strand, 33583444 - 33583558
Alignment:
Q  14 gttgtcaaaatcgggactttacttcaagtcaaaagggaata-caaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatttt 112  Q
    |||||||||||||||| ||||||||  ||| ||||||  || ||| ||| |  | ||||||||||  ||||||| ||||||| ||||||| ||||| |||    
T  33583444 gttgtcaaaatcgggattttacttccggtcgaaaggggttagcaataatcgtaaatcgtaaaatcaaaatcaaaatcgaaga-ttttacttaaggacttt 33583542  T
Q  113 tgtagaatcgatataa 128  Q
    ||||||||||||||||    
T  33583543 tgtagaatcgatataa 33583558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 167
Target Start/End: Original strand, 33593055 - 33593094
Alignment:
Q  128 aaaaatcataaaatcgcaatcaaaatcgatggattttacc 167  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  33593055 aaaaatcataaaatcgcaatcaaaatcgatggattctacc 33593094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 164
Target Start/End: Complemental strand, 7223650 - 7223610
Alignment:
Q  124 tataaaaaatcataaaatcgcaatcaaaatcgatggatttt 164  Q
    ||||| ||||| |||||||||||||||||||||||||||||    
T  7223650 tataagaaatcgtaaaatcgcaatcaaaatcgatggatttt 7223610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 221
Target Start/End: Original strand, 5422601 - 5422644
Alignment:
Q  178 taatactaaatatatgttacaaatgatatatagtcataaatgac 221  Q
    |||| |||||||||||||| |||| |||||||||||||||||||    
T  5422601 taatgctaaatatatgttataaattatatatagtcataaatgac 5422644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 72 - 154
Target Start/End: Original strand, 8275366 - 8275451
Alignment:
Q  72 aaaatcgcaatcaaattcgaagaattttactcaaggatttttgtaga---atcgatataaaaaatcataaaatcgcaatcaaaatc 154  Q
    ||||||||||| ||| |||||| |||||||||||||| ||||||| |   ||| | || | |||||| ||||||||||||||||||    
T  8275366 aaaatcgcaattaaaatcgaaggattttactcaaggacttttgtaaaatcatcaaaatcataaatcacaaaatcgcaatcaaaatc 8275451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 124 - 163
Target Start/End: Complemental strand, 23897949 - 23897910
Alignment:
Q  124 tataaaaaatcataaaatcgcaatcaaaatcgatggattt 163  Q
    ||||| ||||| ||||||||||||||||||||||||||||    
T  23897949 tataagaaatcgtaaaatcgcaatcaaaatcgatggattt 23897910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 164
Target Start/End: Original strand, 2912239 - 2912279
Alignment:
Q  124 tataaaaaatcataaaatcgcaatcaaaatcgatggatttt 164  Q
    ||||||||||| |||||| |||||||||||||||| |||||    
T  2912239 tataaaaaatcgtaaaattgcaatcaaaatcgatgaatttt 2912279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 164
Target Start/End: Original strand, 15528101 - 15528141
Alignment:
Q  124 tataaaaaatcataaaatcgcaatcaaaatcgatggatttt 164  Q
    ||||| ||||| ||||||||||||| |||||||||||||||    
T  15528101 tataagaaatcgtaaaatcgcaatcgaaatcgatggatttt 15528141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 164
Target Start/End: Complemental strand, 17103333 - 17103293
Alignment:
Q  124 tataaaaaatcataaaatcgcaatcaaaatcgatggatttt 164  Q
    ||||| ||||| |||||||| ||||||||||||||||||||    
T  17103333 tataagaaatcgtaaaatcgtaatcaaaatcgatggatttt 17103293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 164
Target Start/End: Original strand, 30912403 - 30912443
Alignment:
Q  124 tataaaaaatcataaaatcgcaatcaaaatcgatggatttt 164  Q
    ||||| ||||| ||||||||||||||||||| |||||||||    
T  30912403 tataagaaatcgtaaaatcgcaatcaaaatctatggatttt 30912443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 127
Target Start/End: Original strand, 33592930 - 33593041
Alignment:
Q  15 ttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatttttg 114  Q
    ||||||||||||||| ||| |||||  || ||||||||||  |||||||  | ||||||||| |||||| || |||||  | |||||||||  | |||||    
T  33592930 ttgtcaaaatcgggattttgcttcatatcgaaagggaataacaaaattgaaaatcgtaaaattgcaatcgaaatcgaatga-tttactcaactacttttg 33593028  T
Q  115 tagaatcgatata 127  Q
    |||||| ||||||    
T  33593029 tagaattgatata 33593041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 114; Significance: 6e-58; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 11 - 223
Target Start/End: Complemental strand, 13100544 - 13100334
Alignment:
Q  11 aaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatt 110  Q
    ||||||||||||||||||||||||||||||||| |||||||||   ||||| || | ||||||||||||||||||| || ||| ||||||||||||||      
T  13100544 aaggttgtcaaaatcgggactttacttcaagtcgaaagggaatggcaaaatcggaactcgtaaaatcgcaatcaaaatcaaaggattttactcaaggaca 13100445  T
Q  111 tttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacctnnnnnnnnntaatactaaatatatgttacaaatgatatatag 210  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||           |||||||||||||||||||||||| |||||||    
T  13100444 tttgtagaatcgatataagaaatcttaaaatcgcaatcaaaatcgatggattttacc--caaaaaataaatactaaatatatgttacaaatggtatatag 13100347  T
Q  211 tcataaatgactt 223  Q
    |||||||||||||    
T  13100346 tcataaatgactt 13100334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 13 - 227
Target Start/End: Original strand, 16125232 - 16125445
Alignment:
Q  13 ggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatttt 112  Q
    |||||| |||||||| ||||||||||| ||| ||||||||||  |||||||||| ||||||||||||||||||| |||||| ||||||||||||||  ||    
T  16125232 ggttgttaaaatcggaactttacttcaggtcgaaagggaatagtaaaattgggactcgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatt 16125331  T
Q  113 tgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacctnnnnnnnnntaatactaaatatatgttacaaatgatatatagtc 212  Q
    |||||||||||||||| ||||  |||||||||||||||||||||||||  |||||          ||||||||||||||||||| ||||| |||||| ||    
T  16125332 tgtagaatcgatataagaaattgtaaaatcgcaatcaaaatcgatggacgttacc-caaaaataataatactaaatatatgttataaatggtatatattc 16125430  T
Q  213 ataaatgacttagtt 227  Q
    |||||||||||||||    
T  16125431 ataaatgacttagtt 16125445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 12 - 221
Target Start/End: Original strand, 21846050 - 21846258
Alignment:
Q  12 aggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggattt 111  Q
    |||||||||||||| |||||||||| || ||| ||||||||||  ||||| |||| || |||||||||||||||| |||||| |||||||||||||| ||    
T  21846050 aggttgtcaaaatcaggactttactccaggtcgaaagggaatagcaaaatcgggactcttaaaatcgcaatcaaaatcgaaggattttactcaaggactt 21846149  T
Q  112 ttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacctnnnnnnnnntaatactaaatatatgttacaaatgatatatagt 211  Q
    ||||||||||||||||| ||||  |||||||||||||||||| |||| ||||||||          ||||||||||||||||||| |||| |||||||||    
T  21846150 ttgtagaatcgatataagaaattgtaaaatcgcaatcaaaatagatgaattttacc-caaaaaaattaatactaaatatatgttataaattatatatagt 21846248  T
Q  212 cataaatgac 221  Q
     |||||||||    
T  21846249 tataaatgac 21846258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 11 - 223
Target Start/End: Complemental strand, 23529010 - 23528799
Alignment:
Q  11 aaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatt 110  Q
    ||||||||||||||||| |||||| |||| || |||| |||| |  || || |||| ||||||||||||||||||| |||||| |||||||||||||| |    
T  23529010 aaggttgtcaaaatcggaactttatttcaggttaaaaaggaacagtaagatcgggactcgtaaaatcgcaatcaaaatcgaaggattttactcaaggact 23528911  T
Q  111 tttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacctnnnnnnnnntaatactaaatatatgttacaaatgatatatag 210  Q
    |||||||||||||||||  ||||  ||||||||||||||||||||||||||||||||          ||||| |||||||| |||| ||||| |||||||    
T  23528910 tttgtagaatcgatataggaaattgtaaaatcgcaatcaaaatcgatggattttacc-caataataataataataaatatacgttataaatggtatatag 23528812  T
Q  211 tcataaatgactt 223  Q
    |||||||||||||    
T  23528811 tcataaatgactt 23528799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 11 - 227
Target Start/End: Original strand, 25146543 - 25146759
Alignment:
Q  11 aaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatt 110  Q
    ||||||||||||||| ||||||||||||| ||  ||||||||||  ||||| || | ||||||||||||||||||| |||||| |||||||||||||  |    
T  25146543 aaggttgtcaaaatcaggactttacttcaggttgaaagggaatagcaaaatcggaaatcgtaaaatcgcaatcaaaatcgaaggattttactcaaggtct 25146642  T
Q  111 tttgtagaatcgatata-aaaaatcataaaatcgcaatcaaaatcgatggattttacctnnnnnnnnntaatactaaatatatgttacaaatgatatata 209  Q
    || |||||||||||||| |||| ||  |||||||||||||||||||||||||||||||          | |||||||||||| |||| ||||  ||||||    
T  25146643 ttcgtagaatcgatatagaaaattctaaaaatcgcaatcaaaatcgatggattttacc-caaaaaaattgatactaaatatacgttataaattgtatata 25146741  T
Q  210 gtcataaatgacttagtt 227  Q
    ||||||||| ||||||||    
T  25146742 gtcataaataacttagtt 25146759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 11 - 227
Target Start/End: Original strand, 9351838 - 9352053
Alignment:
Q  11 aaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatt 110  Q
    |||||||||||||||  |||||||||||| ||| |||| |||||  ||||| |||| ||||||||||||||||||| ||| || ||||||  |||||| |    
T  9351838 aaggttgtcaaaatcaagactttacttcaggtcgaaagcgaatagcaaaatcgggactcgtaaaatcgcaatcaaaatcgtaggattttatccaaggact 9351937  T
Q  111 tttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacctnnnnnnnnntaatactaaatatatgttacaaatgatatatag 210  Q
    ||||||||||| |||||  ||||  ||||||| ||||||||||||||| ||||||||          ||||||||||||||||||| ||||| |||||||    
T  9351938 tttgtagaatctatataggaaattgtaaaatcacaatcaaaatcgatgaattttacc-caaaaaaattaatactaaatatatgttataaatggtatatag 9352036  T
Q  211 tcataaatgacttagtt 227  Q
    ||| |||||||||||||    
T  9352037 tcaaaaatgacttagtt 9352053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 15 - 167
Target Start/End: Original strand, 17869529 - 17869681
Alignment:
Q  15 ttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatttttg 114  Q
    ||||||||||||||||| || |||| |||||||||||| |  ||||| ||||  |||||||||||||||||| || ||| |||||||||||||| ||||     
T  17869529 ttgtcaaaatcgggactctaattcaggtcaaaagggaagagcaaaatcgggacacgtaaaatcgcaatcaaaatcaaaggattttactcaaggactttta 17869628  T
Q  115 tagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacc 167  Q
    ||||||| || ||||||||  ||||||||||||||||||||||| ||||||||    
T  17869629 tagaatcaatgtaaaaaattgtaaaatcgcaatcaaaatcgatgaattttacc 17869681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 11 - 150
Target Start/End: Original strand, 14074258 - 14074397
Alignment:
Q  11 aaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatt 110  Q
    ||||||||||||||| ||||||||||||| ||| ||||||||||  |||||||| | || ||||||| |||||||| |||||| |||||||||||||| |    
T  14074258 aaggttgtcaaaatcaggactttacttcaggtcgaaagggaatagcaaaattggaactcataaaatcacaatcaaaatcgaaggattttactcaaggact 14074357  T
Q  111 tttgtagaatcgatataaaaaatcataaaatcgcaatcaa 150  Q
    |||||||||||||||||  ||||  |||||||||||||||    
T  14074358 tttgtagaatcgatataggaaattgtaaaatcgcaatcaa 14074397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 19 - 227
Target Start/End: Original strand, 9954816 - 9955025
Alignment:
Q  19 caaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatttttgtaga 118  Q
    ||||||||| ||||||||| | ||| ||||||||||  ||||| |||| ||||||||||||||||||| |||||| |||||||  ||||| ||||  |||    
T  9954816 caaaatcggaactttacttaaggtcgaaagggaatagcaaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttaccaaaggacttttcaaga 9954915  T
Q  119 atcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttac-ctnnnnnnnnntaatactaaatatatgttacaaatgatatatagtcataaa 217  Q
    ||| |||||  ||||  ||||||||||||||| ||||||||||||||| |          ||||||| ||||||||||| ||||| ||||||||||||||    
T  9954916 atccatataggaaattgtaaaatcgcaatcaagatcgatggattttacacaaaaaaataataatactgaatatatgttataaatggtatatagtcataaa 9955015  T
Q  218 tgacttagtt 227  Q
    |||| |||||    
T  9955016 tgacctagtt 9955025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 11 - 225
Target Start/End: Original strand, 18304593 - 18304799
Alignment:
Q  11 aaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatt 110  Q
    |||||||||||||||||||||| |||||| ||| ||||| || |  |||||       |||||||||||| ||||| |||||| |||||||| ||||| |    
T  18304593 aaggttgtcaaaatcgggacttcacttcaggtcgaaaggaaaaagcaaaat-------cgtaaaatcgcattcaaaatcgaaggattttactaaaggact 18304685  T
Q  111 tttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacctnnnnnnnnntaatactaaatatatgttacaaatgatatatag 210  Q
    |||||||||||||||||  ||||  |||||||||||||||||||||||||||||| |          |||||||||||||| ||||  |||| |||||||    
T  18304686 tttgtagaatcgatataggaaattgtaaaatcgcaatcaaaatcgatggattttatc-aaaaaaaattaatactaaatatacgttatgaatggtatatag 18304784  T
Q  211 tcataaatgacttag 225  Q
    |||||||||||||||    
T  18304785 tcataaatgacttag 18304799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 11 - 167
Target Start/End: Original strand, 17055695 - 17055850
Alignment:
Q  11 aaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatt 110  Q
    |||||||||||||||||| |||||||| | ||| |||||| ||   ||||| |||| ||||||||||||||||||| |||||| |||||||||||  | |    
T  17055695 aaggttgtcaaaatcgggtctttactt-aggtcgaaaggggattgtaaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttactcaactact 17055793  T
Q  111 tttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacc 167  Q
    ||||||||||||||| || ||||  |||||| ||||||||||| |||||||||||||    
T  17055794 tttgtagaatcgatacaagaaattgtaaaattgcaatcaaaatggatggattttacc 17055850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 68 - 227
Target Start/End: Complemental strand, 47786155 - 47785998
Alignment:
Q  68 tcgtaaaatcgcaatcaaattcgaagaattttactcaaggatttttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacc 167  Q
    |||||||||| ||| |||| |||||| |||||||||||  | ||||||||||| ||||||| |||||| ||||||| ||| |||||||||||||||||||    
T  47786155 tcgtaaaatcacaaccaaaatcgaaggattttactcaactacttttgtagaattgatataagaaatcacaaaatcgaaataaaaatcgatggattttacc 47786056  T
Q  168 tnnnnnnnnntaatactaaatatatgttacaaatgatatatagtcataaatgacttagtt 227  Q
              ||||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  47786055 --acaaaaaataatactaaatatatgttataaatggtatatagtcataaatgacttagtt 47785998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 18 - 166
Target Start/End: Original strand, 9128619 - 9128768
Alignment:
Q  18 tcaaaatcgggactttacttcaagtcaaaa-gggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatttttgta 116  Q
    |||||||||||| ||||| |||||| |||| |||||||  ||||| |||| |||||||||| | |||||| |||||| |||||||| |||||||||||||    
T  9128619 tcaaaatcgggattttacctcaagtaaaaaagggaatagcaaaatcgggactcgtaaaatcacgatcaaaatcgaaggattttactaaaggatttttgta 9128718  T
Q  117 gaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttac 166  Q
    | ||||||||| |||||  ||||||||||||||||||  ||| |||||||    
T  9128719 ggatcgatatagaaaattgtaaaatcgcaatcaaaatttatgaattttac 9128768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 11 - 164
Target Start/End: Original strand, 41032548 - 41032701
Alignment:
Q  11 aaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatt 110  Q
    |||||||||||||| |||| ||||||||| ||  |||| ||| |  |||||||  | ||||||||||||||  ||| ||||||||||||||||||  | |    
T  41032548 aaggttgtcaaaatagggattttacttcaggttgaaagagaagagcaaaattgataatcgtaaaatcgcaactaaaatcgaagaattttactcaactagt 41032647  T
Q  111 tttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggatttt 164  Q
    |||||||||||||||||| ||||  |||||||||||| ||||||||||||||||    
T  41032648 tttgtagaatcgatataagaaattgtaaaatcgcaattaaaatcgatggatttt 41032701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 28 - 167
Target Start/End: Original strand, 19009740 - 19009879
Alignment:
Q  28 gactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatttttgtagaatcgatata 127  Q
    ||||||||||||  || ||||||||||  ||||| |||| ||||||||||||||||||| || ||| |||||||||||| | ||||||| ||||||||||    
T  19009740 gactttacttcagatcgaaagggaatagcaaaatcgggactcgtaaaatcgcaatcaaaatcaaaggattttactcaagaacttttgtaaaatcgatata 19009839  T
Q  128 aaaaatcataaaatcgcaatcaaaatcgatggattttacc 167  Q
      ||||  |||||||||||||||||||  |||||||||||    
T  19009840 ggaaattgtaaaatcgcaatcaaaatcattggattttacc 19009879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 13 - 121
Target Start/End: Original strand, 17197306 - 17197414
Alignment:
Q  13 ggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatttt 112  Q
    |||| |||||||||||||||||||||||||| ||||||| ||  ||||| || | ||||||||||||||  ||| |||||| |||||||||||||| |||    
T  17197306 ggttatcaaaatcgggactttacttcaagtcgaaagggagtagcaaaatcggaactcgtaaaatcgcaactaaaatcgaaggattttactcaaggacttt 17197405  T
Q  113 tgtagaatc 121  Q
    |||||||||    
T  17197406 tgtagaatc 17197414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 98 - 224
Target Start/End: Original strand, 13276128 - 13276253
Alignment:
Q  98 ttactcaaggatttttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacctnnnnnnnnntaatactaaatatatgttac 197  Q
    ||||| ||||| ||||||||||||||||||| ||||  |||||| |||||||||||||||||| | ||||          |||||||||||||||||||     
T  13276128 ttacttaaggaattttgtagaatcgatataagaaattgtaaaattgcaatcaaaatcgatggactatacc-aaaaaataataatactaaatatatgttat 13276226  T
Q  198 aaatgatatatagtcataaatgactta 224  Q
    |||||||||||||||||||||||||||    
T  13276227 aaatgatatatagtcataaatgactta 13276253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 11 - 227
Target Start/End: Original strand, 42179846 - 42180055
Alignment:
Q  11 aaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatt 110  Q
    ||||||||||||||| | | ||||||||  || |||||||||||  | ||| |  | ||||||||||||||||||| |||||| |||||| || |||| |    
T  42179846 aaggttgtcaaaatcagaaatttacttcgggttaaaagggaatagcataatcgaaactcgtaaaatcgcaatcaaaatcgaaggattttattcgaggact 42179945  T
Q  111 tttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacctnnnnnnnnntaatactaaatatatgttacaaatgatatatag 210  Q
    ||||||||       ||  ||||  ||||| | ||||||||||||||||||||||||          |||||||| |||||||||| ||||| |||||||    
T  42179946 tttgtaga-------taggaaattgtaaaaccacaatcaaaatcgatggattttaccaaaaaaaatataatactatatatatgttataaatggtatatag 42180038  T
Q  211 tcataaatgacttagtt 227  Q
    |||||||||||||||||    
T  42180039 tcataaatgacttagtt 42180055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 127
Target Start/End: Original strand, 12002638 - 12002750
Alignment:
Q  13 ggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatttt 112  Q
    |||||||||||||||||||||| || ||||| ||||||| ||  |||||||||| ||  |||||| |||| ||| |||||| ||||||||||  || |||    
T  12002638 ggttgtcaaaatcgggactttaatttaagtcgaaagggagtagcaaaattgggactc--aaaatcacaataaaaatcgaaggattttactcatagacttt 12002735  T
Q  113 tgtagaatcgatata 127  Q
    |||||||||||||||    
T  12002736 tgtagaatcgatata 12002750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 68 - 224
Target Start/End: Complemental strand, 32881617 - 32881469
Alignment:
Q  68 tcgtaaaatcgcaatcaaattcgaagaattttactcaaggatttttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacc 167  Q
    ||||||||||||||   || |||||| |||||||||||  |  |||||||||||||||||| ||||  ||||||||||||||||||| |||| ||||||     
T  32881617 tcgtaaaatcgcaactgaaatcgaaggattttactcaactacgtttgtagaatcgatataagaaattgtaaaatcgcaatcaaaatcaatggcttttac- 32881519  T
Q  168 tnnnnnnnnntaatactaaatatatgttacaaatgatatatagtcataaatgactta 224  Q
               |||||||||||||||||| ||||| ||||||||||| |||||||||    
T  32881518 -------aaaaaatactaaatatatgttataaatggtatatagtcatgaatgactta 32881469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 15 - 167
Target Start/End: Complemental strand, 16434859 - 16434709
Alignment:
Q  15 ttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatttttg 114  Q
    ||||||||||| ||| ||| ||  | ||||||||||||||  ||||| |  | ||||||||| ||||||||| |||||| ||||||||| |  | |||||    
T  16434859 ttgtcaaaatcaggatttttctctaggtcaaaagggaatagcaaaatcgaaaatcgtaaaattgcaatcaaaatcgaaggattttactcgacaacttttg 16434760  T
Q  115 tagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacc 167  Q
    |||||| |||||  || || | |||||||||||||||||||||||||| ||||    
T  16434759 tagaattgatat--aagataacaaaatcgcaatcaaaatcgatggattctacc 16434709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 17 - 127
Target Start/End: Complemental strand, 8773613 - 8773506
Alignment:
Q  17 gtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatttttgta 116  Q
    |||||||||| |||||||||| ||||| ||||||||||  | |||   || ||||||||||||||| ||| | |||| |||||||| |||||||||||||    
T  8773613 gtcaaaatcgagactttacttaaagtcgaaagggaatagcagaat---gactcgtaaaatcgcaattaaaattgaaggattttacttaaggatttttgta 8773517  T
Q  117 gaatcgatata 127  Q
    |||| ||||||    
T  8773516 gaattgatata 8773506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 151
Target Start/End: Complemental strand, 30619294 - 30619156
Alignment:
Q  11 aaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatt 110  Q
    ||||||||||||||||||| ||| ||||| ||| |||| ||| |  ||||| |  | |||| |||||||||  ||| |||||| |||||||||||  | |    
T  30619294 aaggttgtcaaaatcggga-ttttcttcaggtcgaaagagaagagcaaaatcgacaatcgt-aaatcgcaacaaaaatcgaaggattttactcaactact 30619197  T
Q  111 tttgtagaatcgatataaaaaatcataaaatcgcaatcaaa 151  Q
    |||||||||||||||| ||||||  ||||||||||||||||    
T  30619196 tttgtagaatcgatatgaaaaattgtaaaatcgcaatcaaa 30619156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 11 - 106
Target Start/End: Original strand, 27502130 - 27502225
Alignment:
Q  11 aaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaag 106  Q
    ||||||||||||||||||| ||||||||||||||| |  |||||  ||||  | || || |||||| ||||||||| |||||| ||||||||||||    
T  27502130 aaggttgtcaaaatcgggaatttacttcaagtcaacatagaatagcaaaaccgagactcataaaattgcaatcaaaatcgaaggattttactcaag 27502225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 110 - 167
Target Start/End: Complemental strand, 18228519 - 18228462
Alignment:
Q  110 ttttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacc 167  Q
    ||||||||||||||||||| ||||| ||||||||||||||| ||||||| || |||||    
T  18228519 ttttgtagaatcgatataagaaatcgtaaaatcgcaatcaacatcgatgaatgttacc 18228462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 34 - 127
Target Start/End: Complemental strand, 22789514 - 22789421
Alignment:
Q  34 acttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatttttgtagaatcgatata 127  Q
    |||||| ||||||||||| || |||||| |  | |||||||||| |||||||| || ||| |||||||| | ||| ||||||||| ||||||||    
T  22789514 acttcaggtcaaaagggattagaaaaatcgcaaatcgtaaaatcacaatcaaaatcaaaggattttactaatggacttttgtagactcgatata 22789421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 164
Target Start/End: Original strand, 9327206 - 9327246
Alignment:
Q  124 tataaaaaatcataaaatcgcaatcaaaatcgatggatttt 164  Q
    ||||| ||||| |||||||||||||||||||||||||||||    
T  9327206 tataagaaatcgtaaaatcgcaatcaaaatcgatggatttt 9327246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 164
Target Start/End: Original strand, 9352054 - 9352094
Alignment:
Q  124 tataaaaaatcataaaatcgcaatcaaaatcgatggatttt 164  Q
    ||||| ||||||||||||||||||||||||||| |||||||    
T  9352054 tataagaaatcataaaatcgcaatcaaaatcgacggatttt 9352094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 164
Target Start/End: Original strand, 9955026 - 9955066
Alignment:
Q  124 tataaaaaatcataaaatcgcaatcaaaatcgatggatttt 164  Q
    ||||| ||||| |||||||||||||||||||||||||||||    
T  9955026 tataagaaatcgtaaaatcgcaatcaaaatcgatggatttt 9955066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 164
Target Start/End: Complemental strand, 12513419 - 12513379
Alignment:
Q  124 tataaaaaatcataaaatcgcaatcaaaatcgatggatttt 164  Q
    ||||| ||||| |||||||||||||||||||||||||||||    
T  12513419 tataagaaatcgtaaaatcgcaatcaaaatcgatggatttt 12513379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 164
Target Start/End: Original strand, 16125446 - 16125486
Alignment:
Q  124 tataaaaaatcataaaatcgcaatcaaaatcgatggatttt 164  Q
    ||||||||||| ||||||||||||||||||| |||||||||    
T  16125446 tataaaaaatcgtaaaatcgcaatcaaaatcaatggatttt 16125486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 166
Target Start/End: Original strand, 17055996 - 17056032
Alignment:
Q  130 aaatcataaaatcgcaatcaaaatcgatggattttac 166  Q
    ||||| |||||||||||||||||||||||||||||||    
T  17055996 aaatcgtaaaatcgcaatcaaaatcgatggattttac 17056032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 164
Target Start/End: Original strand, 19009937 - 19009977
Alignment:
Q  124 tataaaaaatcataaaatcgcaatcaaaatcgatggatttt 164  Q
    ||||| ||||| |||||||||||||||||||||||||||||    
T  19009937 tataagaaatcgtaaaatcgcaatcaaaatcgatggatttt 19009977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 54
Target Start/End: Original strand, 9954771 - 9954814
Alignment:
Q  11 aaggttgtcaaaatcgggactttacttcaagtcaaaagggaata 54  Q
    ||||||||||||||||||||||||||| | ||| ||||||||||    
T  9954771 aaggttgtcaaaatcgggactttacttaaggtcgaaagggaata 9954814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 135 - 164
Target Start/End: Original strand, 21846270 - 21846299
Alignment:
Q  135 ataaaatcgcaatcaaaatcgatggatttt 164  Q
    ||||||||||||||||||||||||||||||    
T  21846270 ataaaatcgcaatcaaaatcgatggatttt 21846299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 164
Target Start/End: Original strand, 13276257 - 13276297
Alignment:
Q  124 tataaaaaatcataaaatcgcaatcaaaatcgatggatttt 164  Q
    ||||| ||||| |||||||||||||||||||||| ||||||    
T  13276257 tataagaaatcgtaaaatcgcaatcaaaatcgattgatttt 13276297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 128
Target Start/End: Original strand, 21242859 - 21242919
Alignment:
Q  68 tcgtaaaatcgcaatcaaattcgaagaattttactcaaggatttttgtagaatcgatataa 128  Q
    ||||||||||| ||| | | | ||||||||||||||||  | |||||||||||||||||||    
T  21242859 tcgtaaaatcgtaattacaattgaagaattttactcaactaattttgtagaatcgatataa 21242919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 164
Target Start/End: Complemental strand, 32881465 - 32881425
Alignment:
Q  124 tataaaaaatcataaaatcgcaatcaaaatcgatggatttt 164  Q
    ||||| ||||| ||||||||||||||||||||||| |||||    
T  32881465 tataagaaatcgtaaaatcgcaatcaaaatcgatgaatttt 32881425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 105; Significance: 1e-52; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 12 - 227
Target Start/End: Complemental strand, 18844068 - 18843854
Alignment:
Q  12 aggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggattt 111  Q
    |||||||||||||||| ||||||||||| ||| ||||||||||  ||||| |||| ||||||||||||||||||| ||| || |||||||||||||| ||    
T  18844068 aggttgtcaaaatcggaactttacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcgcaatcaaaatcggagtattttactcaaggactt 18843969  T
Q  112 ttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacctnnnnnnnnntaatactaaatatatgttacaaatgatatatagt 211  Q
    |||||||||| |||||  ||||  ||||||||||||||||||||||||||||||||          ||||||||||||||||||| ||||| |||||| |    
T  18843968 ttgtagaatccatataggaaattgtaaaatcgcaatcaaaatcgatggattttacc-caaaaaaattaatactaaatatatgttataaatggtatataat 18843870  T
Q  212 cataaatgacttagtt 227  Q
    ||||||||||||||||    
T  18843869 cataaatgacttagtt 18843854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 11 - 227
Target Start/End: Complemental strand, 20321297 - 20321081
Alignment:
Q  11 aaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatt 110  Q
    |||||||||||||| |||||||||||||| ||||||| ||||||  ||||| |||| || |||||||||||||||| | |||| |||||||| ||||| |    
T  20321297 aaggttgtcaaaattgggactttacttcaggtcaaaaaggaatagtaaaatcgggactcataaaatcgcaatcaaaattgaaggattttactgaaggact 20321198  T
Q  111 tttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacctnnnnnnnnntaatactaaatatatgttacaaatgatatatag 210  Q
    ||||||||||| |||||  ||||  ||||||||||||||||||||||||||||||||          ||||| ||||||||||||| ||||||||||| |    
T  20321197 tttgtagaatctatataggaaattgtaaaatcgcaatcaaaatcgatggattttacccagaaaaaattaatattaaatatatgttataaatgatatatgg 20321098  T
Q  211 tcataaatgacttagtt 227  Q
    |||||||||||||||||    
T  20321097 tcataaatgacttagtt 20321081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 11 - 227
Target Start/End: Complemental strand, 19579298 - 19579081
Alignment:
Q  11 aaggttgtcaaaatcgggactttacttcaagtcaaaagggaataca-aaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggat 109  Q
    ||||| ||||||||||||| ||||||||| ||| ||||||| ||   |||||||||| || |||||||||||||||| |||||| |||| |||||||||     
T  19579298 aaggtagtcaaaatcgggattttacttcaggtcgaaagggagtaagcaaaattgggactcataaaatcgcaatcaaaatcgaaggatttcactcaaggac 19579199  T
Q  110 ttttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacctnnnnnnnnntaatactaaatatatgttacaaatgatatata 209  Q
    ||||||||||||| |||| |||||  ||||||||||||||||||||||||||||||||          |||||| ||||||||||||  |||| || |||    
T  19579198 ttttgtagaatcgttatagaaaattgtaaaatcgcaatcaaaatcgatggattttaccaaaaaaaaaataataccaaatatatgttatgaatggtaaata 19579099  T
Q  210 gtcataaatgacttagtt 227  Q
    ||||||||||||||||||    
T  19579098 gtcataaatgacttagtt 19579081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 10 - 227
Target Start/End: Original strand, 41688440 - 41688655
Alignment:
Q  10 aaaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggat 109  Q
    |||||||||||||||||||||||||||| | | | ||||||||||  ||||| |||| || ||||||||||| |||| |||||| |||||||| |||||     
T  41688440 aaaggttgtcaaaatcgggactttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaaccaaaatcgaaggattttacttaaggac 41688539  T
Q  110 ttttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacctnnnnnnnnntaatactaaatatatgttacaaatgatatata 209  Q
    |||||||||||||||||| |||||  ||||||||||||||||||||||| ||||||||          |||||||||||||||||||  |||| ||||||    
T  41688540 ttttgtagaatcgatatagaaaattgtaaaatcgcaatcaaaatcgatgaattttacc--aaaaaaaataatactaaatatatgttatgaatggtatata 41688637  T
Q  210 gtcataaatgacttagtt 227  Q
    || |||||||| ||||||    
T  41688638 gttataaatgatttagtt 41688655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 11 - 227
Target Start/End: Complemental strand, 43235222 - 43235007
Alignment:
Q  11 aaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatt 110  Q
    |||||||||||||| ||||||||||||| || | ||||||||||  |||||  | | || |||||||||||||||| |||||| |||||||||||| | |    
T  43235222 aaggttgtcaaaattgggactttacttcgagacgaaagggaatagcaaaatcagtactcataaaatcgcaatcaaaatcgaaggattttactcaagaact 43235123  T
Q  111 tttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacctnnnnnnnnntaatactaaatatatgttacaaatgatatatag 210  Q
    |||||||||||||||||||||||  |||||||||||||||||||||| |||||||||          ||||| ||| ||||||||| ||||| | |||||    
T  43235122 tttgtagaatcgatataaaaaattgtaaaatcgcaatcaaaatcgattgattttacc-aaaagataataatagtaagtatatgttataaatggtttatag 43235024  T
Q  211 tcataaatgacttagtt 227  Q
     ||||||||||||||||    
T  43235023 acataaatgacttagtt 43235007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 11 - 166
Target Start/End: Original strand, 27339962 - 27340117
Alignment:
Q  11 aaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatt 110  Q
    ||||||||||||||||| ||||||||||||||  ||||||||||  ||||| |  | |||| |||||||||||||| |||||| |||||||||| ||| |    
T  27339962 aaggttgtcaaaatcggaactttacttcaagttgaaagggaatagcaaaatcgaaaatcgtgaaatcgcaatcaaaatcgaaggattttactcacggact 27340061  T
Q  111 tttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttac 166  Q
    |||||||||| ||||||| ||||  |||||||||||||||||||||| ||||||||    
T  27340062 tttgtagaattgatataagaaatattaaaatcgcaatcaaaatcgatagattttac 27340117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 11 - 227
Target Start/End: Original strand, 18051308 - 18051520
Alignment:
Q  11 aaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatt 110  Q
    ||||| ||||||||||||| ||||||| | ||| |||||||||| |||||| |||| | ||| ||||||||||||| || |||||||||| | ||||| |    
T  18051308 aaggtagtcaaaatcgggattttactttaggtcgaaagggaatagaaaaatcgggacttgtagaatcgcaatcaaaatcaaagaattttattgaaggact 18051407  T
Q  111 tttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacctnnnnnnnnntaatactaaatatatgttacaaatgatatatag 210  Q
    |||||||||||||||||  ||||  ||||||||||| |||||||||||||||| |||          ||||||||||||||||||| |||| ||||   |    
T  18051408 tttgtagaatcgatataggaaattgtaaaatcgcaagcaaaatcgatggatttaacc-aaaaaataataatactaaatatatgttataaattatat---g 18051503  T
Q  211 tcataaatgacttagtt 227  Q
    |||||||||||||||||    
T  18051504 tcataaatgacttagtt 18051520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 73 - 227
Target Start/End: Original strand, 23172265 - 23172418
Alignment:
Q  73 aaatcgcaatcaaattcgaagaattttactcaaggatttttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacctnnnn 172  Q
    |||||| ||||||| |||||||||||||||||| || ||||||||||||||||||  ||||  ||||||||||||||||||||||| ||||||||         
T  23172265 aaatcgtaatcaaaatcgaagaattttactcaaagacttttgtagaatcgatataggaaattgtaaaatcgcaatcaaaatcgatgaattttacc-caaa 23172363  T
Q  173 nnnnntaatactaaatatatgttacaaatgatatatagtcataaatgacttagtt 227  Q
         ||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  23172364 aaaattaatattaaatatatgttacaaatggtatatagtcataaatgacttagtt 23172418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 11 - 127
Target Start/End: Complemental strand, 41427773 - 41427657
Alignment:
Q  11 aaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatt 110  Q
    |||||||||||||||| ||||||||||| |||| ||||||| ||  ||||| |||| ||||||||||||||||||| |||||| ||||||||| |||| |    
T  41427773 aaggttgtcaaaatcgagactttacttcgagtcgaaagggagtagcaaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttactcgaggact 41427674  T
Q  111 tttgtagaatcgatata 127  Q
    |||||||||||||||||    
T  41427673 tttgtagaatcgatata 41427657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 10 - 120
Target Start/End: Original strand, 15051871 - 15051981
Alignment:
Q  10 aaaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggat 109  Q
    ||||||| |||||||||||||||||||||||||| ||| ||| ||  ||||| |||| ||||||||||||||||||| |||||| ||||||||||||||     
T  15051871 aaaggttatcaaaatcgggactttacttcaagtcgaaaaggagtagcaaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttactcaaggac 15051970  T
Q  110 ttttgtagaat 120  Q
    |||||||||||    
T  15051971 ttttgtagaat 15051981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 14 - 165
Target Start/End: Original strand, 19042206 - 19042356
Alignment:
Q  14 gttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggattttt 113  Q
    |||||||| ||| ||||||| ||  | ||| ||||| ||||  ||||| |||| |||||||||| |||| ||| ||||||||||||||| ||||| ||||    
T  19042206 gttgtcaatatcaggactttgctctaggtcgaaaggaaatagcaaaatagggactcgtaaaatcacaattaaaatcgaagaattttacttaaggactttt 19042305  T
Q  114 gtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggatttta 165  Q
    ||||||||||||||  ||||  ||||||||||||| |||| |||||||||||    
T  19042306 gtagaatcgatataggaaattgtaaaatcgcaatc-aaattgatggatttta 19042356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 68 - 223
Target Start/End: Original strand, 21058988 - 21059142
Alignment:
Q  68 tcgtaaaatcgcaatcaaattcgaa-gaattttactcaaggatttttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttac 166  Q
    |||||||||||||| |||| ||||| || ||||||| ||  | |||||||||||  |||||| |||| ||||||||||||||||||||||||||||||||    
T  21058988 tcgtaaaatcgcaaccaaaatcgaaagatttttacttaactacttttgtagaatttatataagaaattataaaatcgcaatcaaaatcgatggattttac 21059087  T
Q  167 ctnnnnnnnnntaatactaaatatatgttacaaatgatatatagtcataaatgactt 223  Q
                |||||||||||||||||| ||||| | ||||||||||||||||||    
T  21059088 --aacaaaaaaaaatactaaatatatgttataaatggtttatagtcataaatgactt 21059142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 11 - 128
Target Start/End: Complemental strand, 19377957 - 19377840
Alignment:
Q  11 aaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatt 110  Q
    |||||||||||| || | ||||||||| ||||  ||||||||||  ||||| | || ||||||| |  |||||||| |||||| |||||||||||||| |    
T  19377957 aaggttgtcaaagtcagtactttactttaagtggaaagggaatagcaaaatcgagaatcgtaaatttacaatcaaaatcgaaggattttactcaaggact 19377858  T
Q  111 tttgtagaatcgatataa 128  Q
    ||||||||||||||||||    
T  19377857 tttgtagaatcgatataa 19377840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 11 - 167
Target Start/End: Original strand, 43005634 - 43005790
Alignment:
Q  11 aaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatt 110  Q
    ||||||||||||||||||| ||| ||| |  || ||||| |||| |||| | |  | | ||||||||||||||||| | |||  |||||||||||    |    
T  43005634 aaggttgtcaaaatcgggattttgctttagatcgaaaggaaatagaaaattcgaaaattgtaaaatcgcaatcaaaattgaaagattttactcaacttct 43005733  T
Q  111 tttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacc 167  Q
    |||||||||||||||||  ||||| |||||||||||| |||||||||||||| ||||    
T  43005734 tttgtagaatcgatataggaaatcgtaaaatcgcaattaaaatcgatggattgtacc 43005790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 11 - 105
Target Start/End: Original strand, 22645502 - 22645596
Alignment:
Q  11 aaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaa 105  Q
    |||||||||||| |||| ||||||||||  ||| ||||||||||  ||||||| || ||||||||| ||||||||| |||||| |||||||||||    
T  22645502 aaggttgtcaaagtcggaactttacttctggtctaaagggaatagcaaaattgagactcgtaaaattgcaatcaaaatcgaaggattttactcaa 22645596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 73 - 167
Target Start/End: Original strand, 38158101 - 38158195
Alignment:
Q  73 aaatcgcaatcaaattcgaagaattttactcaaggatttttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacc 167  Q
    ||||||||| |||| |||||| |||||||||||  |||||||||||||| || ||| ||||  ||||||| |||||||||| |||||||||||||    
T  38158101 aaatcgcaaccaaaatcgaaggattttactcaactatttttgtagaatctatgtaagaaattgtaaaatcacaatcaaaattgatggattttacc 38158195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 86
Target Start/End: Original strand, 6852336 - 6852416
Alignment:
Q  6 tagcaaaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaa 86  Q
    |||| |||||||||||||||||||||| |||||| ||| ||||||||||  ||||| |||| || |||||| |||||||||    
T  6852336 tagccaaggttgtcaaaatcgggacttcacttcaggtcgaaagggaatagcaaaatcgggactcataaaattgcaatcaaa 6852416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 178 - 227
Target Start/End: Complemental strand, 19979787 - 19979738
Alignment:
Q  178 taatactaaatatatgttacaaatgatatatagtcataaatgacttagtt 227  Q
    ||||| ||||||||||||| ||||| ||||||||||||||||||||||||    
T  19979787 taataataaatatatgttataaatggtatatagtcataaatgacttagtt 19979738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 78 - 127
Target Start/End: Original strand, 22984643 - 22984692
Alignment:
Q  78 gcaatcaaattcgaagaattttactcaaggatttttgtagaatcgatata 127  Q
    ||||||||| |||||| |||||||||||||| ||||||||||||||||||    
T  22984643 gcaatcaaaatcgaaggattttactcaaggaattttgtagaatcgatata 22984692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 68 - 134
Target Start/End: Complemental strand, 24648306 - 24648240
Alignment:
Q  68 tcgtaaaatcgcaatcaaattcgaagaattttactcaaggatttttgtagaatcgatataaaaaatc 134  Q
    ||||||||||| ||||||| || ||| |||||||||||  | |||||||||||| ||||||||||||    
T  24648306 tcgtaaaatcgtaatcaaaatcaaaggattttactcaactacttttgtagaatcaatataaaaaatc 24648240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 127
Target Start/End: Original strand, 13341472 - 13341588
Alignment:
Q  11 aaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattg-ggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggat 109  Q
    ||||||||||||||||||| ||| |||||| || |||||||||| ||||||||   | |||||||||||||| | || | |||| | ||||||| |  |     
T  13341472 aaggttgtcaaaatcgggattttgcttcaaatcgaaagggaatagaaaaattgaaaaatcgtaaaatcgcaaacgaaattgaagga-tttactcgactac 13341570  T
Q  110 ttttgtagaatcgatata 127  Q
    ||||||||||||||||||    
T  13341571 ttttgtagaatcgatata 13341588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 72 - 222
Target Start/End: Complemental strand, 26021612 - 26021464
Alignment:
Q  72 aaaatcgcaatcaaattcgaagaattttactcaaggatttttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacctnnn 171  Q
    |||||| |||||||| ||| || |||||||||||  | || ||||  |||||||||| ||||| ||||||| |||| |||  ||||| ||||||||        
T  26021612 aaaatcacaatcaaaatcgtaggattttactcaactacttgtgtaacatcgatataagaaatcgtaaaatcacaattaaa--cgatgcattttaccaaaa 26021515  T
Q  172 nnnnnntaatactaaatatatgttacaaatgatatatagtcataaatgact 222  Q
          |||| |||||||||||||| ||||  |||||||||||||||||||    
T  26021514 caataataatgctaaatatatgttataaattgtatatagtcataaatgact 26021464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 57
Target Start/End: Complemental strand, 34703023 - 34702976
Alignment:
Q  10 aaaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaa 57  Q
    ||||||||||||||||| || ||||||||||||| ||||||| |||||    
T  34703023 aaaggttgtcaaaatcgagattttacttcaagtcgaaagggactacaa 34702976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 211
Target Start/End: Original strand, 27340131 - 27340164
Alignment:
Q  178 taatactaaatatatgttacaaatgatatatagt 211  Q
    ||||||||||||||||||||||||| ||||||||    
T  27340131 taatactaaatatatgttacaaatggtatatagt 27340164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 164
Target Start/End: Original strand, 18051521 - 18051561
Alignment:
Q  124 tataaaaaatcataaaatcgcaatcaaaatcgatggatttt 164  Q
    ||||| ||||| || ||||||||||||||||||||||||||    
T  18051521 tataagaaatcgtacaatcgcaatcaaaatcgatggatttt 18051561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 164
Target Start/End: Complemental strand, 19579080 - 19579040
Alignment:
Q  124 tataaaaaatcataaaatcgcaatcaaaatcgatggatttt 164  Q
    ||||| ||||| |||| ||||||||||||||||||||||||    
T  19579080 tataagaaatcgtaaagtcgcaatcaaaatcgatggatttt 19579040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 164
Target Start/End: Complemental strand, 19979737 - 19979697
Alignment:
Q  124 tataaaaaatcataaaatcgcaatcaaaatcgatggatttt 164  Q
    ||||| ||||| ||||||||||||||||||| |||||||||    
T  19979737 tataagaaatcgtaaaatcgcaatcaaaatccatggatttt 19979697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 164
Target Start/End: Original strand, 21059147 - 21059187
Alignment:
Q  124 tataaaaaatcataaaatcgcaatcaaaatcgatggatttt 164  Q
    ||||| ||||| ||||||||||||||||||||||| |||||    
T  21059147 tataagaaatcgtaaaatcgcaatcaaaatcgatgaatttt 21059187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 164
Target Start/End: Original strand, 41688656 - 41688696
Alignment:
Q  124 tataaaaaatcataaaatcgcaatcaaaatcgatggatttt 164  Q
    ||||| ||||| ||||||||||||||||||||||| |||||    
T  41688656 tataagaaatcgtaaaatcgcaatcaaaatcgatgaatttt 41688696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 102; Significance: 8e-51; HSPs: 2)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 11 - 227
Target Start/End: Complemental strand, 8795 - 8582
Alignment:
Q  11 aaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatt 110  Q
    |||||| |||||||||||||||||||||| ||| ||||||||||  ||||| || | ||||||||||||||||||| | |||| |||||||||||| |||    
T  8795 aaggttctcaaaatcgggactttacttcaggtcgaaagggaataacaaaatcggaactcgtaaaatcgcaatcaaaattgaaggattttactcaagtatt 8696  T
Q  111 tttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacctnnnnnnnnntaatactaaatatatgttacaaatgatatatag 210  Q
    || ||||||||||||||  ||||  ||||||||||||||||||||||||||||||||          |||||||||||||||| || ||||| |||||||    
T  8695 ttcgtagaatcgatataggaaattgtaaaatcgcaatcaaaatcgatggattttacc---aaaaaaataatactaaatatatggtataaatggtatatag 8599  T
Q  211 tcataaatgacttagtt 227  Q
    |||||||||||||||||    
T  8598 tcataaatgacttagtt 8582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 164
Target Start/End: Complemental strand, 8581 - 8541
Alignment:
Q  124 tataaaaaatcataaaatcgcaatcaaaatcgatggatttt 164  Q
    ||||| ||||| ||||||||||||||||||| |||||||||    
T  8581 tataagaaatcgtaaaatcgcaatcaaaatcaatggatttt 8541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 102; Significance: 8e-51; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 11 - 227
Target Start/End: Complemental strand, 5376019 - 5375803
Alignment:
Q  11 aaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatt 110  Q
    |||||||||||||| |||||||||||||| |||||||   ||||  ||||| |||| ||||||||||||||||||| |||||| |||||||||||||| |    
T  5376019 aaggttgtcaaaattgggactttacttcaggtcaaaaataaatagtaaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttactcaaggact 5375920  T
Q  111 tttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacctnnnnnnnnntaatactaaatatatgttacaaatgatatatag 210  Q
    | ||||||||| |||||  ||||  ||||||| ||||||||||||||||||||||||          ||||||||||||||||||| ||||||||||| |    
T  5375919 tctgtagaatctatataggaaattgtaaaatcacaatcaaaatcgatggattttacccaaaaaaaattaatactaaatatatgttataaatgatatatgg 5375820  T
Q  211 tcataaatgacttagtt 227  Q
    |||||||||||||||||    
T  5375819 tcataaatgacttagtt 5375803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 11 - 227
Target Start/End: Complemental strand, 9770466 - 9770251
Alignment:
Q  11 aaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatt 110  Q
    ||||||||||||||||||||||||||| | ||| ||||||||||  ||||| |||| ||||||||||||||||||| |||||| |||||||||||||  |    
T  9770466 aaggttgtcaaaatcgggactttactttaggtcgaaagggaatagcaaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttactcaaggtct 9770367  T
Q  111 tttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacctnnnnnnnnntaatactaaatatatgttacaaatgatatatag 210  Q
    |||||||||||||||||  ||||  ||||||||||||||||||||||| ||||||||          |||||||||||||||||||  |||| |||||||    
T  9770366 tttgtagaatcgatatagcaaattgtaaaatcgcaatcaaaatcgatgaattttacc-caaaaaaattaatactaaatatatgttatgaatggtatatag 9770268  T
Q  211 tcataaatgacttagtt 227  Q
    |||||| | ||||||||    
T  9770267 tcataagtaacttagtt 9770251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 11 - 226
Target Start/End: Complemental strand, 36121177 - 36120964
Alignment:
Q  11 aaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatt 110  Q
    |||||||||||||||||| |||||||||||||  ||||||||||    ||| |||| ||||||||||| ||||||| |||||  |||||||||||||| |    
T  36121177 aaggttgtcaaaatcgggtctttacttcaagttgaaagggaatagcttaatcgggactcgtaaaatcggaatcaaaatcgaaagattttactcaaggact 36121078  T
Q  111 tttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacctnnnnnnnnntaatactaaatatatgttacaaatgatatatag 210  Q
    ||||||| |||||||||  ||||  ||||||||||||||||||||||||||||||||          ||||||||||||||| ||| ||||| |||||||    
T  36121077 tttgtagtatcgatataggaaattgtaaaatcgcaatcaaaatcgatggattttacc--aaaaataataatactaaatatattttataaatggtatatag 36120980  T
Q  211 tcataaatgacttagt 226  Q
    ||||||||||||||||    
T  36120979 tcataaatgacttagt 36120964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 11 - 227
Target Start/End: Original strand, 9911186 - 9911401
Alignment:
Q  11 aaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatt 110  Q
    |||| |||||||||  |||||||||||||  || ||||||||||  ||||| |||| ||||||||||||||| |||  ||||| ||||||||| || | |    
T  9911186 aagggtgtcaaaattaggactttacttcatatcgaaagggaatagtaaaatcgggactcgtaaaatcgcaataaaaaacgaaggattttactcgagaact 9911285  T
Q  111 tttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacctnnnnnnnnntaatactaaatatatgttacaaatgatatatag 210  Q
    |||||||||||||||||| ||||  ||||||||||||||||||||||||| ||||||          ||||||| ||||||||||| ||||| |||||||    
T  9911286 tttgtagaatcgatataagaaattgtaaaatcgcaatcaaaatcgatggactttacc-aaaaaataataatacttaatatatgttataaatggtatatag 9911384  T
Q  211 tcataaatgacttagtt 227  Q
    |||||||||||||||||    
T  9911385 tcataaatgacttagtt 9911401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 12 - 224
Target Start/End: Original strand, 23064737 - 23064948
Alignment:
Q  12 aggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggattt 111  Q
    |||||||||||||||||||||||||||| ||| ||||||||||   |||| || | ||||||||||||||||||| | |||| |||||| ||||||| ||    
T  23064737 aggttgtcaaaatcgggactttacttcaggtcgaaagggaataacgaaatcggaactcgtaaaatcgcaatcaaaattgaaggattttattcaaggactt 23064836  T
Q  112 ttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacctnnnnnnnnntaatactaaatatatgttacaaatgatatatagt 211  Q
    ||||||||||||||||  ||||  |||||| ||||||||||||||  |||||||||          ||||||||||||||||||| ||||||||||  ||    
T  23064837 ttgtagaatcgatataggaaattgtaaaattgcaatcaaaatcgaatgattttacc-aaaaaataataatactaaatatatgttataaatgatatagggt 23064935  T
Q  212 cataaatgactta 224  Q
    |||||||||||||    
T  23064936 cataaatgactta 23064948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 11 - 128
Target Start/End: Complemental strand, 55476342 - 55476225
Alignment:
Q  11 aaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatt 110  Q
    |||||| |||||||||||||||||||||||||| ||||||| ||  ||||| || | ||||||||||||||||||| |||||| |||||||||||||| |    
T  55476342 aaggttatcaaaatcgggactttacttcaagtcgaaagggagtaataaaatcggtactcgtaaaatcgcaatcaaaatcgaaggattttactcaaggact 55476243  T
Q  111 tttgtagaatcgatataa 128  Q
    ||||||||||||||||||    
T  55476242 tttgtagaatcgatataa 55476225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 11 - 227
Target Start/End: Original strand, 8010915 - 8011127
Alignment:
Q  11 aaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatt 110  Q
    ||||||||||||||||||||||     |||| |  |||||||||  ||||| |||| ||||||||||||||||||| |||||| |||||||||||  |||    
T  8010915 aaggttgtcaaaatcgggactta----caaggcggaagggaatagcaaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttactcaactatt 8011010  T
Q  111 tttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacctnnnnnnnnntaatactaaatatatgttacaaatgatatatag 210  Q
    ||| |||||||||||||| ||||  ||||||||||||||||||||||| ||||||||          |||| |||||||||||||| ||||  ||||||     
T  8011011 tttatagaatcgatataagaaattgtaaaatcgcaatcaaaatcgatgtattttaccaaaacaaaaataatgctaaatatatgttataaattgtatataa 8011110  T
Q  211 tcataaatgacttagtt 227  Q
    | |||||||| ||||||    
T  8011111 ttataaatgaattagtt 8011127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 11 - 163
Target Start/End: Original strand, 6346730 - 6346882
Alignment:
Q  11 aaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatt 110  Q
    ||||||||||||||||| | ||| ||||| ||| |||||||| |  ||||| |  | |||||||||| |||||||| |||||| |||||||||||  | |    
T  6346730 aaggttgtcaaaatcggaaatttgcttcaggtcgaaagggaagagcaaaatcgaaaatcgtaaaatcacaatcaaaatcgaaggattttactcaactact 6346829  T
Q  111 tttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattt 163  Q
    ||||||||||  |||||| ||||  ||||||||||||||||||||||||||||    
T  6346830 tttgtagaatgaatataagaaattgtaaaatcgcaatcaaaatcgatggattt 6346882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 68 - 223
Target Start/End: Complemental strand, 10143197 - 10143042
Alignment:
Q  68 tcgtaaaatcgcaatcaaattcgaagaattttactcaaggatttttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacc 167  Q
    ||||||||||||||||||| |||||| |||||| ||||  | ||||||||||||||||||| | ||  |||||||||||||||||| ||||||||||| |    
T  10143197 tcgtaaaatcgcaatcaaaatcgaaggattttattcaactaattttgtagaatcgatataagagattgtaaaatcgcaatcaaaattgatggattttatc 10143098  T
Q  168 tnnnnnnnnntaatactaaatatatgttacaaatgatatatagtcataaatgactt 223  Q
              ||||||||||||||| ||| || || ||||||||||||||||||||    
T  10143097 aaaaaaaaaataatactaaatatatattataattggtatatagtcataaatgactt 10143042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 68 - 227
Target Start/End: Original strand, 5361797 - 5361953
Alignment:
Q  68 tcgtaaaatcgcaatcaaattcgaagaattttactcaaggatttttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacc 167  Q
    ||||||||| |||| |||| ||||||  ||||||||||  | ||||||||||||||||||  ||||| |||||||||||||||| ||||||||||| |||    
T  5361797 tcgtaaaattgcaaacaaaatcgaagggttttactcaactacttttgtagaatcgatatatgaaatcgtaaaatcgcaatcaaagtcgatggatttgacc 5361896  T
Q  168 tnnnnnnnnntaatactaaatatatgttacaaatgatatatagtcataaatgacttagtt 227  Q
               |||||||||||||||||| ||||| |||||| |||||||||||||||||    
T  5361897 ---aaaagaaaaatactaaatatatgttaaaaatggtatataatcataaatgacttagtt 5361953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 68 - 153
Target Start/End: Complemental strand, 37240536 - 37240450
Alignment:
Q  68 tcgtaaaatcgcaatcaaattcgaagaattttactcaaggatttttgtagaatcgatataaa-aaatcataaaatcgcaatcaaaat 153  Q
    ||||||||||||||||||| |||||| |||||||||||  | |||||||||||||||||||| ||||| ||||||| ||||||||||    
T  37240536 tcgtaaaatcgcaatcaaaatcgaaggattttactcaactacttttgtagaatcgatataaagaaatcgtaaaatcacaatcaaaat 37240450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 71 - 167
Target Start/End: Complemental strand, 7045057 - 7044961
Alignment:
Q  71 taaaatcgcaatcaaattcgaagaattttactcaaggatttttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacc 167  Q
    |||||||||||||||| |||||  |||||||||||  | ||||| | ||||||||||| ||||| ||||||  ||||||||||||||||||||||||    
T  7045057 taaaatcgcaatcaaaatcgaatgattttactcaactacttttgaataatcgatataagaaatcgtaaaatatcaatcaaaatcgatggattttacc 7044961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 68 - 227
Target Start/End: Complemental strand, 17466376 - 17466218
Alignment:
Q  68 tcgtaaaatcgcaatcaaattcgaagaattttactcaaggatttttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacc 167  Q
    ||||||||| |||| |||| | |||  ||| |||||||  | |||||| |||||||||||| ||||  |||||| ||||||||||||||||||||||| |    
T  17466376 tcgtaaaattgcaaacaaaattgaaagattatactcaactacttttgtggaatcgatataagaaattgtaaaattgcaatcaaaatcgatggatttta-c 17466278  T
Q  168 tnnnnnnnnntaatactaaatatatgttacaaatgatatatagtcataaatgacttagtt 227  Q
              ||||| ||||||||||||| ||||| ||||||||||||||||||||||||    
T  17466277 aacaaaaaaataatattaaatatatgttataaatggtatatagtcataaatgacttagtt 17466218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 72 - 167
Target Start/End: Complemental strand, 24719868 - 24719773
Alignment:
Q  72 aaaatcgcaatcaaattcgaagaattttactcaaggatttttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacc 167  Q
    ||||||| ||||| | |||||| ||||||||| |  | ||||||||||||||||||| ||||| |||||||||||||||||||||||  |||||||    
T  24719868 aaaatcgaaatcacaatcgaaggattttactcgattacttttgtagaatcgatataagaaatcgtaaaatcgcaatcaaaatcgatgagttttacc 24719773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 11 - 164
Target Start/End: Complemental strand, 7452859 - 7452707
Alignment:
Q  11 aaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatt 110  Q
    ||||||||||||||  ||| ||| ||||| ||| |||||||| | |||| |||  | ||||||||||||||||||| |||||| | |||||||||  | |    
T  7452859 aaggttgtcaaaattaggattttgcttcaggtcgaaagggaagagaaaagttgaaaatcgtaaaatcgcaatcaaaatcgaagga-tttactcaactact 7452761  T
Q  111 tttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggatttt 164  Q
    ||||||||||| |||||  ||||| ||||| | |||  ||||||||||||||||    
T  7452760 tttgtagaatcaatatacgaaatcgtaaaagcacaactaaaatcgatggatttt 7452707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 12 - 153
Target Start/End: Original strand, 13551448 - 13551589
Alignment:
Q  12 aggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggattt 111  Q
    ||||||| || ||| ||||||||||||  ||| ||| ||||||  |||||   || ||||||||||||||| ||| |||||| ||||||||| |||| ||    
T  13551448 aggttgtaaagatccggactttacttctggtcgaaaaggaatagcaaaatcaagactcgtaaaatcgcaattaaaatcgaaggattttactcgaggactt 13551547  T
Q  112 ttgtagaatcgatataaaaaatcataaaatcgcaatcaaaat 153  Q
    || |||||||||| || |||||  ||||||| ||||||||||    
T  13551548 ttatagaatcgatttagaaaattttaaaatcacaatcaaaat 13551589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 178 - 227
Target Start/End: Complemental strand, 13023758 - 13023709
Alignment:
Q  178 taatactaaatatatgttacaaatgatatatagtcataaatgacttagtt 227  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  13023758 taatactaaatatatgttataaatggtatatagtcataaatgacttagtt 13023709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 68 - 167
Target Start/End: Complemental strand, 10394907 - 10394809
Alignment:
Q  68 tcgtaaaatcgcaatcaaattcgaagaattttactcaaggatttttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacc 167  Q
    ||||||||||||||||||| |||||| | |||||||||  | ||||||||||||| ||||  ||||| ||||||  ||||| |||||||||||| |||||    
T  10394907 tcgtaaaatcgcaatcaaaatcgaaggactttactcaactacttttgtagaatcggtataggaaatcgtaaaattacaatc-aaatcgatggatattacc 10394809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 20 - 127
Target Start/End: Complemental strand, 13023903 - 13023796
Alignment:
Q  20 aaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatttttgtagaa 119  Q
    ||||| |||||||||||||||||| |||| |||||  ||||| || | |||||||||| |||||||  | |||  ||||||| |||||| ||||||| ||    
T  13023903 aaaattgggactttacttcaagtcgaaagagaatagcaaaatcggaactcgtaaaatcacaatcaagatagaatgattttacccaaggaattttgtaaaa 13023804  T
Q  120 tcgatata 127  Q
    ||||||||    
T  13023803 tcgatata 13023796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 70 - 222
Target Start/End: Original strand, 9149556 - 9149709
Alignment:
Q  70 gtaaaatcgcaatcaaattcgaagaattttactcaaggatttttgtagaatcgatataaaaaatcat-aaaatcgcaatcaaaatcgatggattttacct 168  Q
    |||||||  |||||||| | |||| |||||||||||  | ||| ||||||||||||||| ||||| | |||| |||||||||||| ||| |||||||||     
T  9149556 gtaaaattccaatcaaaattgaaggattttactcaactactttcgtagaatcgatataagaaatcgtaaaaaacgcaatcaaaattgatagattttacca 9149655  T
Q  169 nnnnnnnnntaatactaaatatatgttacaaatgatatatagtcataaatgact 222  Q
             |||| |||||||||||||| ||||  |||||||| ||||||||||    
T  9149656 aaagaaaaataatgctaaatatatgttataaattgtatatagttataaatgact 9149709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 167
Target Start/End: Complemental strand, 7045298 - 7045140
Alignment:
Q  11 aaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatt 110  Q
    |||||||||||||| || | ||||||||| ||| |||||||| |  |||||    | || |||||||||||||||| |||||| |||||||||||    |    
T  7045298 aaggttgtcaaaataggaattttacttcaggtcgaaagggaagagcaaaatcaaaaatcataaaatcgcaatcaaaatcgaaggattttactcaactgct 7045199  T
Q  111 tttgtagaatc--gatataaaaaatcataaaatcgcaatcaaaatcgatggattttacc 167  Q
    |||  ||||||  ||||||| ||||| ||||||  ||||||||||| |||||| |||||    
T  7045198 tttcaagaatcgagatataagaaatcgtaaaatatcaatcaaaatctatggatcttacc 7045140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 116 - 166
Target Start/End: Complemental strand, 4157101 - 4157051
Alignment:
Q  116 agaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttac 166  Q
    |||||| ||| || ||||| |||||||||||||||||||||||||||||||    
T  4157101 agaatcaatacaagaaatcgtaaaatcgcaatcaaaatcgatggattttac 4157051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 57 - 127
Target Start/End: Complemental strand, 8367510 - 8367440
Alignment:
Q  57 aaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatttttgtagaatcgatata 127  Q
    ||||| |||| ||||||||| ||||||||| |||||| |||||||||||||| ||| |||  |||||||||    
T  8367510 aaaatcgggactcgtaaaattgcaatcaaaatcgaaggattttactcaaggactttggtaatatcgatata 8367440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 8409863 - 8409790
Alignment:
Q  18 tcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcga 91  Q
    |||||||||||||||||||||||||  ||||||| ||  ||||||| ||||  |||||||| ||||||| ||||    
T  8409863 tcaaaatcgggactttacttcaagttgaaagggagtagcaaaattgagatttataaaatcgtaatcaaaatcga 8409790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 165
Target Start/End: Complemental strand, 13023708 - 13023667
Alignment:
Q  124 tataaaaaatcataaaatcgcaatcaaaatcgatggatttta 165  Q
    ||||||||||| |||||||||||||||||||||| |||||||    
T  13023708 tataaaaaatcgtaaaatcgcaatcaaaatcgattgatttta 13023667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 164
Target Start/End: Original strand, 9911402 - 9911442
Alignment:
Q  124 tataaaaaatcataaaatcgcaatcaaaatcgatggatttt 164  Q
    ||||| ||||| |||||||||||||||||||||||||||||    
T  9911402 tataagaaatcgtaaaatcgcaatcaaaatcgatggatttt 9911442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 164
Target Start/End: Original strand, 13551613 - 13551653
Alignment:
Q  124 tataaaaaatcataaaatcgcaatcaaaatcgatggatttt 164  Q
    ||||| |||||||||||||||||| ||||||||||||||||    
T  13551613 tataagaaatcataaaatcgcaattaaaatcgatggatttt 13551653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 224
Target Start/End: Complemental strand, 37240445 - 37240399
Alignment:
Q  178 taatactaaatatatgttacaaatgatatatagtcataaatgactta 224  Q
    |||||||||||||||| || ||||| |||| ||||||||||||||||    
T  37240445 taatactaaatatatgatataaatggtatagagtcataaatgactta 37240399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 166
Target Start/End: Original strand, 5884186 - 5884223
Alignment:
Q  129 aaaatcataaaatcgcaatcaaaatcgatggattttac 166  Q
    |||||||||||||| |||||||||| ||||||||||||    
T  5884186 aaaatcataaaatcacaatcaaaatagatggattttac 5884223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 223
Target Start/End: Complemental strand, 8889570 - 8889371
Alignment:
Q  11 aaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatt 110  Q
    ||||||||||||||||||| ||| ||||| ||| |||| ||   ||||| |||  | | |||||||||||| |||| |||||| || ||||||||  | |    
T  8889570 aaggttgtcaaaatcgggattttgcttcaggtcgaaagagagagcaaaa-ttgacaattgtaaaatcgcaaccaaaatcgaaggatcttactcaactact 8889472  T
Q  111 tttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacctnnnnnnnnntaatactaaatatatgttacaaatgatatatag 210  Q
    ||||||||||         ||||  ||||||||||||||||||||||| ||||||||           |||||||||||||| ||| ||||| |||||||    
T  8889471 tttgtagaat---------aaattgtaaaatcgcaatcaaaatcgatgaattttaccaacaaaaa---aatactaaatatatattataaatggtatatag 8889384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 164
Target Start/End: Complemental strand, 36120963 - 36120922
Alignment:
Q  123 atataaaaaatcataaaatcgcaatcaaaatcgatggatttt 164  Q
    |||||| ||||| ||||||||||||||||||||||| |||||    
T  36120963 atataagaaatcgtaaaatcgcaatcaaaatcgatgaatttt 36120922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 222
Target Start/End: Complemental strand, 8409769 - 8409725
Alignment:
Q  178 taatactaaatatatgttacaaatgatatatagtcataaatgact 222  Q
    |||| |||||||||||||| |||| | ||||||||||||||||||    
T  8409769 taatgctaaatatatgttataaattacatatagtcataaatgact 8409725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 164
Target Start/End: Complemental strand, 8889366 - 8889326
Alignment:
Q  124 tataaaaaatcataaaatcgcaatcaaaatcgatggatttt 164  Q
    ||||| ||||| ||||||||||||||||||||||| |||||    
T  8889366 tataagaaatcgtaaaatcgcaatcaaaatcgatgaatttt 8889326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 164
Target Start/End: Complemental strand, 10143037 - 10142997
Alignment:
Q  124 tataaaaaatcataaaatcgcaatcaaaatcgatggatttt 164  Q
    ||||| ||||| ||||||| |||||||||||||||||||||    
T  10143037 tataagaaatcgtaaaatcacaatcaaaatcgatggatttt 10142997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 102; Significance: 8e-51; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 11 - 227
Target Start/End: Complemental strand, 28746130 - 28745915
Alignment:
Q  11 aaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatt 110  Q
    |||||||||||||| |||||||||||||| ||| ||||  ||||  ||||| |||| ||||||||||||||||||| ||||||||||||||||||| | |    
T  28746130 aaggttgtcaaaattgggactttacttcaggtcgaaagaaaatagcaaaatcgggactcgtaaaatcgcaatcaaaatcgaagaattttactcaagaact 28746031  T
Q  111 tttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacctnnnnnnnnntaatactaaatatatgttacaaatgatatatag 210  Q
    |||||||||||||||||  ||||  ||||||||||||||||||||||||||||||||          ||||| ||||||||||||| ||||  |||||||    
T  28746030 tttgtagaatcgatataggaaattgtaaaatcgcaatcaaaatcgatggattttacc-caaaaaaattaatagtaaatatatgttataaatagtatatag 28745932  T
Q  211 tcataaatgacttagtt 227  Q
    |||||||||||||||||    
T  28745931 tcataaatgacttagtt 28745915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 11 - 227
Target Start/End: Original strand, 24619972 - 24620190
Alignment:
Q  11 aaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatt 110  Q
    ||||||||||||||||| ||||||||||||||||||||||||||  |||||||||| | ||||||||||||||||| |||||| ||||||||||| || |    
T  24619972 aaggttgtcaaaatcggaactttacttcaagtcaaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaagact 24620071  T
Q  111 tttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacctnnnnnnnnntaa--tactaaatatatgttacaaatgatatat 208  Q
    ||||||||||||||||| |||||  |||||||||||||||||| | |||||||||||           ||  |||||||||||| ||| ||||| |||||    
T  24620072 tttgtagaatcgatatagaaaattgtaaaatcgcaatcaaaattgttggattttaccaaaaaaaaataaaaatactaaatatattttataaatggtatat 24620171  T
Q  209 agtcataaatgacttagtt 227  Q
    | |||||||||||||||||    
T  24620172 aatcataaatgacttagtt 24620190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 14 - 227
Target Start/End: Complemental strand, 39428258 - 39428041
Alignment:
Q  14 gttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaatt----cgaagaattttactcaaggat 109  Q
    ||||||||||||||||||||||||   ||  ||||||||||  ||||| |||| || |||||||||||||||| |    ||||| ||||||||||| |||    
T  39428258 gttgtcaaaatcgggactttacttgcggttgaaagggaatagcaaaatcgggactcataaaatcgcaatcaaaataaatcgaaggattttactcaaagat 39428159  T
Q  110 ttttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacctnnnnnnnnntaatactaaatatatgttacaaatgatatata 209  Q
    |||||| |||||||||||  ||||  ||||||||||||||||||||||||||||||||          ||||||||||||||||||| || |  ||||||    
T  39428158 ttttgtggaatcgatataggaaattgtaaaatcgcaatcaaaatcgatggattttacccaaaaaaaattaatactaaatatatgttataagtagtatata 39428059  T
Q  210 gtcataaatgacttagtt 227  Q
    ||||||||||||||||||    
T  39428058 gtcataaatgacttagtt 39428041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 11 - 127
Target Start/End: Original strand, 8592174 - 8592290
Alignment:
Q  11 aaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatt 110  Q
    ||||||||| ||||||||||||||||||||||| ||||| ||||  ||||| | || ||||||||||||||||||| |||||| |||||||||||||| |    
T  8592174 aaggttgtcgaaatcgggactttacttcaagtcgaaaggaaatagcaaaatcgagactcgtaaaatcgcaatcaaaatcgaaggattttactcaaggact 8592273  T
Q  111 tttgtagaatcgatata 127  Q
    |||||||||||||||||    
T  8592274 tttgtagaatcgatata 8592290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 11 - 167
Target Start/End: Complemental strand, 29067630 - 29067475
Alignment:
Q  11 aaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatt 110  Q
    ||||||||||||||||| ||||||||||| ||| || |||||||  ||||| || | || ||||||| |||||||| |||||| ||||||||||||||||    
T  29067630 aaggttgtcaaaatcggaactttacttcaggtcgaatgggaatagcaaaatcggaactcataaaatctcaatcaaa-tcgaaggattttactcaaggatt 29067532  T
Q  111 tttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacc 167  Q
    |||||||||| |||||   || |  ||||||||||||||||||||||||||||||||    
T  29067531 tttgtagaattgatattggaagttgtaaaatcgcaatcaaaatcgatggattttacc 29067475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 57 - 167
Target Start/End: Complemental strand, 20756330 - 20756220
Alignment:
Q  57 aaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatttttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcga 156  Q
    ||||| |||| ||||||||||||||||||| | |||  |||||||||||||||||||||||||||||||||  ||||  |||||||||||||||||||||    
T  20756330 aaaatcgggactcgtaaaatcgcaatcaaaattgaaagattttactcaaggatttttgtagaatcgatataggaaattgtaaaatcgcaatcaaaatcga 20756231  T
Q  157 tggattttacc 167  Q
    |||||||||||    
T  20756230 tggattttacc 20756220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 11 - 127
Target Start/End: Original strand, 8560232 - 8560348
Alignment:
Q  11 aaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatt 110  Q
    |||||| |||||||||||||||||||||||||||||||||| ||  ||||| | || |||| |||||||||||||| |||||| ||||||||||||| ||    
T  8560232 aaggttatcaaaatcgggactttacttcaagtcaaaagggagtagcaaaatcgagactcgtgaaatcgcaatcaaaatcgaaggattttactcaaggttt 8560331  T
Q  111 tttgtagaatcgatata 127  Q
    ||||||||||| |||||    
T  8560332 tttgtagaatcaatata 8560348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 70 - 227
Target Start/End: Complemental strand, 42697143 - 42696986
Alignment:
Q  70 gtaaaatcgcaatcaaattcgaagaattttactcaaggatttttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacctn 169  Q
    ||||||||||||  ||| | |||| |||||| ||||  | ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||      
T  42697143 gtaaaatcgcaactaaaattgaaggattttattcaactacttttgtagaatcgatataagaaatcataaactcgcaatcaaaatcgatggattttaccaa 42697044  T
Q  170 nnnnnnnntaatactaaatatatgttacaaatgatatatagtcataaatgacttagtt 227  Q
             ||||| |||||||||||| ||||| ||||||||||||||||||||||||    
T  42697043 aaaaaaaaaaataccaaatatatgttataaatggtatatagtcataaatgacttagtt 42696986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 11 - 127
Target Start/End: Complemental strand, 18014345 - 18014229
Alignment:
Q  11 aaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatt 110  Q
    |||||| ||||||||||||||||||||||||| |||| ||| ||  |||||||||| ||||||||||||||||||| |||||| |||||||||||||| |    
T  18014345 aaggttatcaaaatcgggactttacttcaagttaaaatggagtagcaaaattgggactcgtaaaatcgcaatcaaaatcgaaggattttactcaaggact 18014246  T
Q  111 tttgtagaatcgatata 127  Q
    ||| || || |||||||    
T  18014245 tttataaaaccgatata 18014229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 14 - 222
Target Start/End: Complemental strand, 27676787 - 27676579
Alignment:
Q  14 gttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggattttt 113  Q
    ||||| |||||| ||| ||| ||||||||| |||||||| |  ||||| |  | || |||||||||||||||| |||||  |||||||||||  | ||||    
T  27676787 gttgttaaaatcaggattttgcttcaagtcgaaagggaagagcaaaatcgaaaatcttaaaatcgcaatcaaaatcgaaagattttactcaactactttt 27676688  T
Q  114 gtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacctnnnnnnnnntaatactaaatatatgttacaaatgatatatagtca 213  Q
    ||| ||||||||||| ||||| ||||||| ||||||||||| ||||||||||||           |||  ||||||||||||| |||| |||||||||||    
T  27676687 gtaaaatcgatataagaaatcgtaaaatcacaatcaaaatcaatggattttaccaaaacaaaaacaatgttaaatatatgttataaattatatatagtca 27676588  T
Q  214 taaatgact 222  Q
    |||||||||    
T  27676587 taaatgact 27676579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 11 - 167
Target Start/End: Complemental strand, 17064661 - 17064505
Alignment:
Q  11 aaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatt 110  Q
    |||||||||||||| |||| ||| ||||| ||| ||||  || |  ||||| |  | ||||||||||||||||||| |||||| |||||||||||  | |    
T  17064661 aaggttgtcaaaattgggattttgcttcaggtcgaaagaaaagatcaaaatcgacaatcgtaaaatcgcaatcaaaatcgaaggattttactcaactact 17064562  T
Q  111 tttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacc 167  Q
    ||||||||||| |||||| ||||  |||||| |||||||||||||||||||||||||    
T  17064561 tttgtagaatcaatataagaaattgtaaaattgcaatcaaaatcgatggattttacc 17064505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 11 - 127
Target Start/End: Original strand, 20766676 - 20766792
Alignment:
Q  11 aaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatt 110  Q
    |||||||||||||||||||||||||||||| || |||| || ||  ||||| | || ||||||||||||||||||| ||||| ||||||||||||||  |    
T  20766676 aaggttgtcaaaatcgggactttacttcaactcgaaagagagtagcaaaatcgagactcgtaaaatcgcaatcaaaatcgaaaaattttactcaagggct 20766775  T
Q  111 tttgtagaatcgatata 127  Q
    |||| ||||||||||||    
T  20766776 tttggagaatcgatata 20766792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 18 - 124
Target Start/End: Complemental strand, 3041570 - 3041464
Alignment:
Q  18 tcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatttttgtag 117  Q
    |||||||||||| ||||||||||||| ||| ||| ||  ||||| |||| ||||||||||||||||||| |||||| |||||||||||||| ||||||||    
T  3041570 tcaaaatcgggattttacttcaagtcgaaatggagtagcaaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtag 3041471  T
Q  118 aatcgat 124  Q
    || ||||    
T  3041470 aaacgat 3041464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 10 - 167
Target Start/End: Original strand, 10872489 - 10872646
Alignment:
Q  10 aaaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggat 109  Q
    |||||||||||||||| ||| ||||||||| |||||||||||| | ||||||    | || |||||||||||||||| | |||| |||||||| ||  |     
T  10872489 aaaggttgtcaaaatcaggattttacttcaggtcaaaagggaagagaaaaatcaaaaatcataaaatcgcaatcaaaattgaaggattttactaaactac 10872588  T
Q  110 ttttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacc 167  Q
    ||||| ||||||||||||| ||||| |||||||  ||| ||||| |||||||||||||    
T  10872589 ttttgaagaatcgatataagaaatcgtaaaatcagaataaaaattgatggattttacc 10872646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 11 - 120
Target Start/End: Complemental strand, 22971162 - 22971054
Alignment:
Q  11 aaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatt 110  Q
    |||||| ||||||| ||||||||||||||||| |||||| | ||  ||||| |||| ||||||||||||||||||| |||||| |||||||||||||| |    
T  22971162 aaggttatcaaaattgggactttacttcaagttaaaagg-agtagcaaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttactcaaggact 22971064  T
Q  111 tttgtagaat 120  Q
    ||||||||||    
T  22971063 tttgtagaat 22971054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 11 - 167
Target Start/End: Original strand, 25870097 - 25870253
Alignment:
Q  11 aaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatt 110  Q
    |||||||||||||||| || ||| ||| | ||| |||| ||| |  ||||| |  | |||||||||||||| |||| || ||| |||||||||||  |      
T  25870097 aaggttgtcaaaatcgagattttgctttaggtcgaaagagaagagtaaaatcgacaatcgtaaaatcgcaaccaaaatcaaaggattttactcaactaag 25870196  T
Q  111 tttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacc 167  Q
    |||||||||||||||||| ||||  ||||||||||||||||||||||||||||||||    
T  25870197 tttgtagaatcgatataagaaattgtaaaatcgcaatcaaaatcgatggattttacc 25870253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 11 - 156
Target Start/End: Complemental strand, 27090796 - 27090645
Alignment:
Q  11 aaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatt 110  Q
    ||||||||| |||||| || ||||||| | ||| |||||||||| ||||||||  | |||||| |||||||| ||| |||||| |||||||||||||| |    
T  27090796 aaggttgtcgaaatcgagattttactttaggtcgaaagggaatagaaaaattgcaaatcgtaagatcgcaataaaaatcgaaggattttactcaaggaat 27090697  T
Q  111 tttgtagaatcgatata------aaaaatcataaaatcgcaatcaaaatcga 156  Q
    |||||| ||||||||||       |||||| |||||||||||||||||||||    
T  27090696 tttgtataatcgatataggatagcaaaatcgtaaaatcgcaatcaaaatcga 27090645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 68 - 167
Target Start/End: Original strand, 6136401 - 6136500
Alignment:
Q  68 tcgtaaaatcgcaatcaaattcgaagaattttactcaaggatttttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacc 167  Q
    ||||||||||||||||||| || ||  |||||||||||  | |||| |||||||||||||| ||||| ||||||| ||||||||||||||||||||||||    
T  6136401 tcgtaaaatcgcaatcaaaatcaaaagattttactcaactacttttatagaatcgatataagaaatcgtaaaatcacaatcaaaatcgatggattttacc 6136500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 68 - 167
Target Start/End: Complemental strand, 13286241 - 13286142
Alignment:
Q  68 tcgtaaaatcgcaatcaaattcgaagaattttactcaaggatttttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacc 167  Q
    ||||||||||||||||||| || ||  |||||||||||  | ||||||||||||||||||| ||||| ||||||| |||| |||||||||||||||||||    
T  13286241 tcgtaaaatcgcaatcaaaatcaaaagattttactcaactacttttgtagaatcgatataagaaatcgtaaaatcacaatgaaaatcgatggattttacc 13286142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 11 - 167
Target Start/End: Original strand, 22355841 - 22355993
Alignment:
Q  11 aaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatt 110  Q
    |||||| |||||||||| ||||||| ||| ||| ||| ||||||  ||||| |||| ||||||||||||||||||| || ||  |||||| ||||||| |    
T  22355841 aaggttctcaaaatcggaactttacatcaggtcgaaatggaatagcaaaatcgggactcgtaaaatcgcaatcaaaatcaaaagattttattcaaggact 22355940  T
Q  111 tttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacc 167  Q
    |||||| |||||||    |||||  ||||| ||||| ||||||||||||||||||||    
T  22355941 tttgtaaaatcgat----aaaattgtaaaaccgcaaacaaaatcgatggattttacc 22355993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 70 - 226
Target Start/End: Complemental strand, 22137572 - 22137417
Alignment:
Q  70 gtaaaatcgcaatcaaattcgaagaattttactcaaggatttttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacctn 169  Q
    |||||||| ||| |||| || |||||||||||||||  | ||||||||||||||||||| ||||| ||||| |  ||||||||| ||||||||||||       
T  22137572 gtaaaatcacaaccaaaatcaaagaattttactcaactacttttgtagaatcgatataagaaatcgtaaaaccaaaatcaaaattgatggattttacaaa 22137473  T
Q  170 nnnnnnnntaatactaaatatatgttacaaatgatatatagtcataaatgacttagt 226  Q
            |||||||||||||| |||| ||||  |||||||||||||||||||||||    
T  22137472 aaaattaataatactaaatata-gttataaatagtatatagtcataaatgacttagt 22137417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 68 - 167
Target Start/End: Original strand, 3449142 - 3449241
Alignment:
Q  68 tcgtaaaatcgcaatcaaattcgaagaattttactcaaggatttttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacc 167  Q
    |||||||||||||| |||| |||||  |||||| ||||  | ||||||||||||||||||| |||   |||||||||||||||||| |||||||||||||    
T  3449142 tcgtaaaatcgcaaccaaaatcgaatgattttattcaactacttttgtagaatcgatataagaaaatgtaaaatcgcaatcaaaattgatggattttacc 3449241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 12 - 127
Target Start/End: Complemental strand, 19348906 - 19348791
Alignment:
Q  12 aggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggattt 111  Q
    ||||| ||||||| | |||||||||||||||||||||||| ||  ||||| | || ||||||||||||||||||| | |||| |||||| | ||||| ||    
T  19348906 aggttatcaaaattgagactttacttcaagtcaaaagggagtagcaaaatcgagactcgtaaaatcgcaatcaaaatggaaggattttattgaaggactt 19348807  T
Q  112 ttgtagaatcgatata 127  Q
    || || ||||||||||    
T  19348806 ttataaaatcgatata 19348791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 11 - 167
Target Start/End: Complemental strand, 28136116 - 28135960
Alignment:
Q  11 aaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatt 110  Q
    ||||||||||||||  ||| |||||||||||| |||| || | |  ||||| | || |||||||||||| |||||| |||||| |||||||||||  | |    
T  28136116 aaggttgtcaaaattaggattttacttcaagttaaaatggtagagtaaaatcgagaatcgtaaaatcgctatcaaaatcgaaggattttactcaactact 28136017  T
Q  111 tttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacc 167  Q
    |||||| ||| ||||||| ||||  |||||| | |||||||||| ||  ||||||||    
T  28136016 tttgtaaaattgatataagaaattgtaaaataggaatcaaaatcaatatattttacc 28135960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 178 - 227
Target Start/End: Original strand, 15515197 - 15515246
Alignment:
Q  178 taatactaaatatatgttacaaatgatatatagtcataaatgacttagtt 227  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  15515197 taatactaaatatatgttataaatggtatatagtcataaatgacttagtt 15515246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 24649524 - 24649588
Alignment:
Q  11 aaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaa 75  Q
    |||||||||||||| |||||||||||||| ||| ||||||||||  |||||||||| ||||||||    
T  24649524 aaggttgtcaaaattgggactttacttcaggtcgaaagggaatagcaaaattgggactcgtaaaa 24649588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 14 - 127
Target Start/End: Original strand, 21553671 - 21553783
Alignment:
Q  14 gttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaa-gaattttactcaaggatttt 112  Q
    ||||| ||||||||||||||||||||| || ||||||| || |||||| |||| | ||  ||||||||||||| ||||| |  ||||| ||||||| |||    
T  21553671 gttgtaaaaatcgggactttacttcaaatcgaaagggagtagaaaaatcgggactggt--aatcgcaatcaaaatcgaaggttttttattcaaggacttt 21553768  T
Q  113 tgtagaatcgatata 127  Q
    |||||||| ||||||    
T  21553769 tgtagaattgatata 21553783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 68 - 161
Target Start/End: Complemental strand, 17796862 - 17796771
Alignment:
Q  68 tcgtaaaatcgcaatcaaattcgaagaattttactcaaggatttttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggat 161  Q
    ||||||||| ||||| ||| |||||| |||||||||||  | |||||||||||||  |||| ||||| |||||||| ||||||||| |||||||    
T  17796862 tcgtaaaattgcaattaaaatcgaagcattttactcaactacttttgtagaatcg--ataagaaatcgtaaaatcgaaatcaaaattgatggat 17796771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 68 - 161
Target Start/End: Complemental strand, 19105302 - 19105211
Alignment:
Q  68 tcgtaaaatcgcaatcaaattcgaagaattttactcaaggatttttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggat 161  Q
    ||||||||| ||||| ||| |||||| |||||||||||  | |||||||||||||  |||| ||||| |||||||| ||||||||| |||||||    
T  19105302 tcgtaaaattgcaattaaaatcgaagcattttactcaactacttttgtagaatcg--ataagaaatcgtaaaatcgaaatcaaaattgatggat 19105211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 70 - 166
Target Start/End: Complemental strand, 21963726 - 21963630
Alignment:
Q  70 gtaaaatcgcaatcaaattcgaagaattttactcaaggatttttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttac 166  Q
    |||||||| ||| |||| |  |||||||||||||||  | |||| |||||||||||||| ||||| ||||| |  ||||||||| ||||||||||||    
T  21963726 gtaaaatcacaaccaaaattaaagaattttactcaattacttttatagaatcgatataagaaatcgtaaaaccagaatcaaaattgatggattttac 21963630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 70 - 166
Target Start/End: Complemental strand, 21986162 - 21986066
Alignment:
Q  70 gtaaaatcgcaatcaaattcgaagaattttactcaaggatttttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttac 166  Q
    |||||||| ||| |||| |  |||||||||||||||  | |||| |||||||||||||| ||||| ||||| |  ||||||||| ||||||||||||    
T  21986162 gtaaaatcacaaccaaaattaaagaattttactcaattacttttatagaatcgatataagaaatcgtaaaaccagaatcaaaattgatggattttac 21986066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 68 - 167
Target Start/End: Original strand, 9152817 - 9152915
Alignment:
Q  68 tcgtaaaatcgcaatcaaattcgaagaattttactcaaggatttttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacc 167  Q
    ||||||||||| || |||| |||||  |||| ||||||  ||||||||||||||||| ||  ||||  ||||||| |||||||||||||| |||||||||    
T  9152817 tcgtaaaatcgtaaccaaaatcgaaagatttgactcaactatttttgtagaatcgat-tatgaaattgtaaaatcacaatcaaaatcgatagattttacc 9152915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 180 - 227
Target Start/End: Original strand, 22494731 - 22494778
Alignment:
Q  180 atactaaatatatgttacaaatgatatatagtcataaatgacttagtt 227  Q
    ||||||||||||||||| ||||| ||||||||||||| ||||||||||    
T  22494731 atactaaatatatgttataaatggtatatagtcataactgacttagtt 22494778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 129 - 167
Target Start/End: Original strand, 6861032 - 6861070
Alignment:
Q  129 aaaatcataaaatcgcaatcaaaatcgatggattttacc 167  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  6861032 aaaatcataaaatcgcaatcaaaatcgatggattctacc 6861070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 71 - 227
Target Start/End: Original strand, 8155964 - 8156120
Alignment:
Q  71 taaaatcgcaatcaaattcgaagaattttactcaaggatttttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacctnn 170  Q
    |||||||||||  ||  |||||| |||||||||||  | |||||||| || ||||||| |||   ||||||||||||||| |||| |||||||||||       
T  8155964 taaaatcgcaactaagatcgaaggattttactcaactacttttgtagcattgatataagaaactgtaaaatcgcaatcaatatcg-tggattttaccaaa 8156062  T
Q  171 nnnnnnn-taatactaaatatatgttacaaatgatatatagtcataaatgacttagtt 227  Q
            ||||||||||||||||||| ||||| |||||||| |||||| ||||||||    
T  8156063 aataataataatactaaatatatgttataaatggtatatagttataaataacttagtt 8156120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 9169942 - 9169869
Alignment:
Q  18 tcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcga 91  Q
    |||||||||| ||||||||||||||| ||||| | ||  ||||||||||  |||||||| ||||||||| ||||    
T  9169942 tcaaaatcggaactttacttcaagtcgaaaggaagtagcaaaattgggacccgtaaaattgcaatcaaaatcga 9169869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 164
Target Start/End: Original strand, 8156121 - 8156161
Alignment:
Q  124 tataaaaaatcataaaatcgcaatcaaaatcgatggatttt 164  Q
    ||||| ||||| |||||||||||||||||||||||||||||    
T  8156121 tataagaaatcgtaaaatcgcaatcaaaatcgatggatttt 8156161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 118
Target Start/End: Complemental strand, 41671533 - 41671426
Alignment:
Q  11 aaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatt 110  Q
    ||||||||||||||||||| ||| ||||| ||| |||| ||| |  ||||| |  | | |||||||||||| |||| |||||| |||||||||||  | |    
T  41671533 aaggttgtcaaaatcgggattttgcttcaggtcgaaagagaagagcaaaatcgataattgtaaaatcgcaaccaaaatcgaaggattttactcaactact 41671434  T
Q  111 tttgtaga 118  Q
    ||||||||    
T  41671433 tttgtaga 41671426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 164
Target Start/End: Complemental strand, 28745908 - 28745868
Alignment:
Q  124 tataaaaaatcataaaatcgcaatcaaaatcgatggatttt 164  Q
    ||||| ||||| ||||||||||||||||||||||| |||||    
T  28745908 tataagaaatcgtaaaatcgcaatcaaaatcgatgaatttt 28745868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 164
Target Start/End: Complemental strand, 29067422 - 29067382
Alignment:
Q  124 tataaaaaatcataaaatcgcaatcaaaatcgatggatttt 164  Q
    ||||| ||||| ||||||| |||||||||||||||||||||    
T  29067422 tataagaaatcgtaaaatcacaatcaaaatcgatggatttt 29067382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 160
Target Start/End: Complemental strand, 39428040 - 39428004
Alignment:
Q  124 tataaaaaatcataaaatcgcaatcaaaatcgatgga 160  Q
    ||||| ||||| |||||||||||||||||||||||||    
T  39428040 tataagaaatcgtaaaatcgcaatcaaaatcgatgga 39428004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 164
Target Start/End: Complemental strand, 42696985 - 42696945
Alignment:
Q  124 tataaaaaatcataaaatcgcaatcaaaatcgatggatttt 164  Q
    ||||| ||||| ||||||||||||||||||||||| |||||    
T  42696985 tataagaaatcgtaaaatcgcaatcaaaatcgatgaatttt 42696945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 93; Significance: 2e-45; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 11 - 167
Target Start/End: Complemental strand, 20064077 - 20063921
Alignment:
Q  11 aaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatt 110  Q
    |||||||||||||||||| |||||||||| ||  ||||||||||  ||||| | || ||||||||||||||||||| ||||||||||||||||||||| |    
T  20064077 aaggttgtcaaaatcggggctttacttcaggttgaaagggaatagcaaaatcgagactcgtaaaatcgcaatcaaaatcgaagaattttactcaaggact 20063978  T
Q  111 tttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacc 167  Q
    |||||||||||||||||  ||||  ||||||||||| ||||||||||||||||||||    
T  20063977 tttgtagaatcgatataggaaattgtaaaatcgcaaccaaaatcgatggattttacc 20063921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 15 - 227
Target Start/End: Original strand, 31237755 - 31237967
Alignment:
Q  15 ttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatttttg 114  Q
    ||||||||||| |||||||||||||  |||||||||||||  ||||| |||| ||||||||||||||||||  |||||| |||||||||||||| |||||    
T  31237755 ttgtcaaaatcaggactttacttcagttcaaaagggaatagtaaaatcgggactcgtaaaatcgcaatcaatatcgaaggattttactcaaggacttttg 31237854  T
Q  115 tagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacctnnnnnnnnntaatac-taaatatatgttacaaatgatatatagtca 213  Q
    || |||||||||| |||||  |||||| |||||||||||||||||||||||||          |||||| | ||||||||||| ||||| |||||| |||    
T  31237855 taaaatcgatatagaaaattgtaaaattgcaatcaaaatcgatggattttacc-aaaaaataataatacatgaatatatgttataaatggtatataatca 31237953  T
Q  214 taaatgacttagtt 227  Q
    ||||||||||||||    
T  31237954 taaatgacttagtt 31237967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 11 - 167
Target Start/End: Original strand, 19262091 - 19262247
Alignment:
Q  11 aaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatt 110  Q
    ||||||||| ||||||| ||||||||||||||| || |||||||  ||||| |||| ||||||||||||||||||| |||||  |||||||||||||| |    
T  19262091 aaggttgtcgaaatcggaactttacttcaagtcgaatgggaatagcaaaatcgggactcgtaaaatcgcaatcaaaatcgaaagattttactcaaggact 19262190  T
Q  111 tttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacc 167  Q
    |||||||||||||||||| ||||  ||||||||||||||||||||| ||| ||||||    
T  19262191 tttgtagaatcgatataagaaattgtaaaatcgcaatcaaaatcgacggactttacc 19262247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 56 - 227
Target Start/End: Complemental strand, 36430157 - 36429987
Alignment:
Q  56 aaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatttttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcg 155  Q
    ||||||||||| ||||||||||||||||||| |||||| || ||||||||  |||||||||||||||||| ||||||   |||||| |||||||||||||    
T  36430157 aaaaattgggactcgtaaaatcgcaatcaaaatcgaaggatattactcaataatttttgtagaatcgataaaaaaaaaattaaaattgcaatcaaaatcg 36430058  T
Q  156 atggattttacctnnnnnnnnntaatactaaatatatgttacaaatgatatatagtcataaatgacttagtt 227  Q
    |||||||||||||          |||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  36430057 atggattttacctaaaaaaaaa-aatactaaatatatgttagaaatgatatatagtcataaattacttagtt 36429987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 9 - 227
Target Start/End: Original strand, 25538918 - 25539136
Alignment:
Q  9 caaaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaagga 108  Q
    ||||||||||||||||||| ||||||| ||| ||| |||||||||| |||||| |||  ||||||||||||||||||| |  ||| |||||||| ||  |    
T  25538918 caaaggttgtcaaaatcggtactttacatcaggtcgaaagggaatagaaaaatcgggtctcgtaaaatcgcaatcaaaattaaaggattttactgaacta 25539017  T
Q  109 tttttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacctnnnnnnnnntaatactaaatatatgttacaaatgatatat 208  Q
     ||||||||||||||||||||||||  |||||| ||||||||||||||| |||||||||          |||| |||||||||||||| | ||  |||||    
T  25539018 cttttgtagaatcgatataaaaaattgtaaaattgcaatcaaaatcgatagattttaccaaaacagaaataatgctaaatatatgttatatattgtatat 25539117  T
Q  209 agtcataaatgacttagtt 227  Q
    |||||||||||||| ||||    
T  25539118 agtcataaatgactcagtt 25539136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 11 - 167
Target Start/End: Complemental strand, 30433169 - 30433013
Alignment:
Q  11 aaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatt 110  Q
    |||||||||||||||||||| |||||||| ||| ||| | |||| |||||| |||| || |||||||||||||||| |||||  |||||||||||||| |    
T  30433169 aaggttgtcaaaatcgggacattacttcaggtcgaaaagcaatagaaaaatcgggactcataaaatcgcaatcaaaatcgaatgattttactcaaggact 30433070  T
Q  111 tttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacc 167  Q
    ||| |||||||||||||  ||||  |||||||||||||||||| |||||||||||||    
T  30433069 tttatagaatcgatataggaaattgtaaaatcgcaatcaaaatagatggattttacc 30433013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 10 - 163
Target Start/End: Complemental strand, 1405138 - 1404985
Alignment:
Q  10 aaaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggat 109  Q
    ||||||||||||||||| ||||||| || | ||||||||||||||  ||||| || | || |||||||||||||||| |||||| |||||||||||| |     
T  1405138 aaaggttgtcaaaatcgagactttaatttaggtcaaaagggaatagcaaaatcggtactcataaaatcgcaatcaaaatcgaaggattttactcaagaac 1405039  T
Q  110 ttttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattt 163  Q
    ||||||||||||||||||  ||||  |||||| |||||||||||||||||||||    
T  1405038 ttttgtagaatcgatataggaaattgtaaaattgcaatcaaaatcgatggattt 1404985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 11 - 127
Target Start/End: Original strand, 21869096 - 21869212
Alignment:
Q  11 aaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatt 110  Q
    ||||| ||||||||||||||||||||||||||| |||||||||| |||||| |||| || |||||||||||| ||| |||||| |||||| |||| || |    
T  21869096 aaggtcgtcaaaatcgggactttacttcaagtcgaaagggaatagaaaaatcgggactcttaaaatcgcaattaaaatcgaaggattttattcaatgact 21869195  T
Q  111 tttgtagaatcgatata 127  Q
    |||||||||||||||||    
T  21869196 tttgtagaatcgatata 21869212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 21 - 124
Target Start/End: Original strand, 27523881 - 27523984
Alignment:
Q  21 aaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatttttgtagaat 120  Q
    ||||||||||||||||||||||| ||||||| ||  ||||| |||| ||||||||||||||||||| |||||| |||||||||||||| |||||||||||    
T  27523881 aaatcgggactttacttcaagtcgaaagggagtagcaaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaat 27523980  T
Q  121 cgat 124  Q
    ||||    
T  27523981 cgat 27523984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 18 - 124
Target Start/End: Original strand, 20034004 - 20034110
Alignment:
Q  18 tcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatttttgtag 117  Q
    |||||||||||||||||||||||||| ||||||| ||  ||||| | || ||||||||||||||||||| | |||| |||||||||||||| ||||||||    
T  20034004 tcaaaatcgggactttacttcaagtcgaaagggagtagcaaaatcgagactcgtaaaatcgcaatcaaaattgaaggattttactcaaggacttttgtag 20034103  T
Q  118 aatcgat 124  Q
    |||||||    
T  20034104 aatcgat 20034110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 11 - 127
Target Start/End: Complemental strand, 974693 - 974576
Alignment:
Q  11 aaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggat-tcgtaaaatcgcaatcaaattcgaagaattttactcaaggat 109  Q
    |||||| |||| ||||||||||||||||||||| ||||||| ||  ||||| || |  ||||||||||||||||||| |||||| ||||||||||||||     
T  974693 aaggttatcaatatcgggactttacttcaagtcgaaagggagtagcaaaatcggaaactcgtaaaatcgcaatcaaaatcgaaggattttactcaaggac 974594  T
Q  110 ttttgtagaatcgatata 127  Q
    ||||||||||||||||||    
T  974593 ttttgtagaatcgatata 974576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 11 - 124
Target Start/End: Complemental strand, 7302136 - 7302023
Alignment:
Q  11 aaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatt 110  Q
    |||||| |||||||||||||||||||||||||  || |||  ||  ||||| |||| ||||||||| ||||||||| |||||| |||||||||||||| |    
T  7302136 aaggttatcaaaatcgggactttacttcaagttgaaggggggtagcaaaatcgggactcgtaaaattgcaatcaaaatcgaaggattttactcaaggact 7302037  T
Q  111 tttgtagaatcgat 124  Q
    ||||||||||||||    
T  7302036 tttgtagaatcgat 7302023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 11 - 167
Target Start/End: Complemental strand, 8428576 - 8428420
Alignment:
Q  11 aaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatt 110  Q
    ||||||||||||||||||| ||| ||| | ||| |||||||||| ||||||    | |  |||||||||||||||| |||||| ||||| |||||  |||    
T  8428576 aaggttgtcaaaatcgggattttgctttaggtcgaaagggaatagaaaaatcaaaaattctaaaatcgcaatcaaaatcgaaggattttgctcaactatt 8428477  T
Q  111 tttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacc 167  Q
    ||||||||||| |||| ||||||| ||||||||||||  ||||||||| ||| ||||    
T  8428476 tttgtagaatcaatatcaaaaatcgtaaaatcgcaatacaaatcgatgaattatacc 8428420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 68 - 167
Target Start/End: Original strand, 13502505 - 13502604
Alignment:
Q  68 tcgtaaaatcgcaatcaaattcgaagaattttactcaaggatttttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacc 167  Q
    ||||||||||| ||||||| | |||| || ||| ||||  |||||||||||||| |||||| ||||| ||||||||||||||||||||||||||||||||    
T  13502505 tcgtaaaatcgtaatcaaaattgaaggatattagtcaactatttttgtagaatctatataagaaatcgtaaaatcgcaatcaaaatcgatggattttacc 13502604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 70 - 223
Target Start/End: Original strand, 35565788 - 35565940
Alignment:
Q  70 gtaaaatcgcaatcaaattcgaagaatttta---ctcaaggatttttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttac 166  Q
    ||||||||||||  ||| |||||| ||||||   |||||  | ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  35565788 gtaaaatcgcaactaaaatcgaaggattttattactcaactacttttgtagaatcgatataagaaatcataaaatcacaatcaaaatcgatggattttac 35565887  T
Q  167 ctnnnnnnnnntaatactaaatatatgttacaaatgatatatagtcataaatgactt 223  Q
    |           |||||||||||||||||| ||||  ||||||||||||||||||||    
T  35565888 c----aaaaaaaaatactaaatatatgttataaattgtatatagtcataaatgactt 35565940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 68 - 163
Target Start/End: Complemental strand, 27407088 - 27406993
Alignment:
Q  68 tcgtaaaatcgcaatcaaattcgaagaattttactcaaggatttttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattt 163  Q
    |||||| |||||||||||| || |||||||||||||||  | ||||| | |||| |||||| |||||||||||||||||||||||| |||||||||    
T  27407088 tcgtaatatcgcaatcaaaatccaagaattttactcaactacttttggataatcaatataagaaatcataaaatcgcaatcaaaattgatggattt 27406993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 71 - 227
Target Start/End: Original strand, 15588690 - 15588840
Alignment:
Q  71 taaaatcgcaatcaaattcgaagaattttactcaaggatttttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacctnn 170  Q
    ||||||||||| |||| |||||| |||||||||||  | ||  |||| |||||||||| |||| |||||||||||||||||||||||||||||||||       
T  15588690 taaaatcgcaaccaaaatcgaaggattttactcaattacttc-gtaggatcgatataagaaattataaaatcgcaatcaaaatcgatggattttacc--- 15588785  T
Q  171 nnnnnnntaatactaaatatatgttacaaatgatatatagtcataaatgacttagtt 227  Q
           ||||||||||||||||  | ||||| |||||| |||||||||||||||||    
T  15588786 aaaaaaataatactaaatatatg--ataaatggtatataatcataaatgacttagtt 15588840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 71 - 163
Target Start/End: Complemental strand, 16767079 - 16766987
Alignment:
Q  71 taaaatcgcaatcaaattcgaagaattttactcaaggatttttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattt 163  Q
    |||||||||||||||| | |||| |||||||||||  | |||| |||||||||||||| ||||| ||||||||||||||||||| | ||||||    
T  16767079 taaaatcgcaatcaaaattgaaggattttactcaactacttttatagaatcgatataagaaatcgtaaaatcgcaatcaaaatcaaaggattt 16766987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 11 - 127
Target Start/End: Complemental strand, 19245943 - 19245827
Alignment:
Q  11 aaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatt 110  Q
    ||||||||||||||||||| ||| ||||||||  ||||||||||  |||||    | ||||||||||||||||||| || ||| |||||||| ||  | |    
T  19245943 aaggttgtcaaaatcgggattttgcttcaagttgaaagggaatagcaaaatcaaaaatcgtaaaatcgcaatcaaaatctaaggattttacttaactact 19245844  T
Q  111 tttgtagaatcgatata 127  Q
    |||||||||||||||||    
T  19245843 tttgtagaatcgatata 19245827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 178 - 227
Target Start/End: Complemental strand, 31578192 - 31578143
Alignment:
Q  178 taatactaaatatatgttacaaatgatatatagtcataaatgacttagtt 227  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  31578192 taatactaaatatatgttataaatggtatatagtcataaatgacttagtt 31578143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 167
Target Start/End: Complemental strand, 31023539 - 31023500
Alignment:
Q  128 aaaaatcataaaatcgcaatcaaaatcgatggattttacc 167  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  31023539 aaaaatcataaaatcgtaatcaaaatcgatggattttacc 31023500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 57 - 124
Target Start/End: Complemental strand, 34578197 - 34578130
Alignment:
Q  57 aaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatttttgtagaatcgat 124  Q
    ||||| |||| || |||||||||||||||| | |||| |||||||||| ||| |||||||||||||||    
T  34578197 aaaatcgggactcataaaatcgcaatcaaaattgaaggattttactcatggacttttgtagaatcgat 34578130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 118 - 227
Target Start/End: Original strand, 1690610 - 1690718
Alignment:
Q  118 aatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacctnnnnnnnnntaatactaaatatatgttacaaatgatatatagtcataaa 217  Q
    ||||||||||| || || ||||||||||||||||||||||  ||||||||          ||||| ||||||||| ||| ||||| ||||||||||||||    
T  1690610 aatcgatataagaattcgtaaaatcgcaatcaaaatcgataaattttacc-aaaaaataataatattaaatatattttataaatggtatatagtcataaa 1690708  T
Q  218 tgacttagtt 227  Q
     |||||||||    
T  1690709 agacttagtt 1690718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 135 - 168
Target Start/End: Complemental strand, 19491983 - 19491950
Alignment:
Q  135 ataaaatcgcaatcaaaatcgatggattttacct 168  Q
    ||||||||||||||||||||||||||||||||||    
T  19491983 ataaaatcgcaatcaaaatcgatggattttacct 19491950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 164
Target Start/End: Original strand, 31237968 - 31238008
Alignment:
Q  124 tataaaaaatcataaaatcgcaatcaaaatcgatggatttt 164  Q
    ||||| ||||| |||||||||||||||||||||||||||||    
T  31237968 tataagaaatcgtaaaatcgcaatcaaaatcgatggatttt 31238008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 68 - 123
Target Start/End: Original strand, 27749341 - 27749396
Alignment:
Q  68 tcgtaaaatcgcaatcaaattcgaagaattttactcaaggatttttgtagaatcga 123  Q
    |||||||||||||||| || | |||  | |||||||||||||||||||||||||||    
T  27749341 tcgtaaaatcgcaatctaaattgaatgagtttactcaaggatttttgtagaatcga 27749396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 227
Target Start/End: Complemental strand, 34841817 - 34841719
Alignment:
Q  129 aaaatcataaaatcgcaatcaaaatcgatggattttacctnnnnnnnnntaatactaaatatatgttacaaatgatatatagtcataaatgacttagtt 227  Q
    |||||| ||||||||||||||||||||||||||| || |          ||||| ||||||||||||| ||||  ||||||||||||||| ||| ||||    
T  34841817 aaaatcgtaaaatcgcaatcaaaatcgatggattctatccaaacaaaaataataataaatatatgttataaattgtatatagtcataaataactcagtt 34841719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 166
Target Start/End: Complemental strand, 16767087 - 16767049
Alignment:
Q  128 aaaaatcataaaatcgcaatcaaaatcgatggattttac 166  Q
    |||||||||||||||||||||||||| || |||||||||    
T  16767087 aaaaatcataaaatcgcaatcaaaattgaaggattttac 16767049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 166
Target Start/End: Complemental strand, 16767224 - 16767186
Alignment:
Q  128 aaaaatcataaaatcgcaatcaaaatcgatggattttac 166  Q
    |||||||||||||||||||||||||| || |||||||||    
T  16767224 aaaaatcataaaatcgcaatcaaaattgaaggattttac 16767186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 164
Target Start/End: Complemental strand, 1404922 - 1404881
Alignment:
Q  123 atataaaaaatcataaaatcgcaatcaaaatcgatggatttt 164  Q
    |||||| ||||| ||||||| |||||||||||||||||||||    
T  1404922 atataagaaatcgtaaaatcacaatcaaaatcgatggatttt 1404881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 166
Target Start/End: Complemental strand, 1405080 - 1405047
Alignment:
Q  133 tcataaaatcgcaatcaaaatcgatggattttac 166  Q
    |||||||||||||||||||||||| |||||||||    
T  1405080 tcataaaatcgcaatcaaaatcgaaggattttac 1405047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 167
Target Start/End: Original strand, 5395401 - 5395453
Alignment:
Q  115 tagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacc 167  Q
    |||||||||||||| ||||| ||||||  |||||||||||||  |||||||||    
T  5395401 tagaatcgatataagaaatcttaaaattacaatcaaaatcgaaagattttacc 5395453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 164
Target Start/End: Complemental strand, 30432557 - 30432517
Alignment:
Q  124 tataaaaaatcataaaatcgcaatcaaaatcgatggatttt 164  Q
    ||||| ||||| |||||| ||||||||||||||||||||||    
T  30432557 tataagaaatcgtaaaattgcaatcaaaatcgatggatttt 30432517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 164
Target Start/End: Complemental strand, 36429986 - 36429946
Alignment:
Q  124 tataaaaaatcataaaatcgcaatcaaaatcgatggatttt 164  Q
    ||||| ||||| || ||||||||||||||||||||||||||    
T  36429986 tataagaaatcgtacaatcgcaatcaaaatcgatggatttt 36429946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 11 - 167
Target Start/End: Original strand, 56200 - 56356
Alignment:
Q  11 aaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatt 110  Q
    |||||||||||||||| |||||||||||| ||| ||||||||||  ||||| | ||    |||||||||||||||| |||||| |||||||||||||| |    
T  56200 aaggttgtcaaaatcgagactttacttcaggtcgaaagggaatagcaaaatcgagacatctaaaatcgcaatcaaaatcgaaggattttactcaaggact 56299  T
Q  111 tttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacc 167  Q
    |||||||||||||||||  ||||  ||||||||||||||||||||||||||||||||    
T  56300 tttgtagaatcgatataggaaattgtaaaatcgcaatcaaaatcgatggattttacc 56356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 62; Significance: 6e-27; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 70 - 167
Target Start/End: Original strand, 93539 - 93636
Alignment:
Q  70 gtaaaatcgcaatcaaattcgaagaattttactcaaggatttttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacc 167  Q
    ||||||||| ||||||| |||||| |||||| ||||  | ||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  93539 gtaaaatcgtaatcaaaatcgaaggattttattcaactacttttgtagaatcgatataataaatcgtaaaatcgcaatcaaaatcgatggattttacc 93636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 163
Target Start/End: Original strand, 93703 - 93736
Alignment:
Q  130 aaatcataaaatcgcaatcaaaatcgatggattt 163  Q
    ||||| ||||||||||||||||||||||||||||    
T  93703 aaatcgtaaaatcgcaatcaaaatcgatggattt 93736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 11 - 124
Target Start/End: Original strand, 38302 - 38414
Alignment:
Q  11 aaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatt 110  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||  ||||| |||| ||||||||| ||||||| | |||||| |||||||||| ||| |    
T  38302 aaggttgtcaaaatcgggactttacttcaagtcgaaaggaaatagcaaaatcgggactcgtaaaattgcaatcaga-tcgaaggattttactcatggact 38400  T
Q  111 tttgtagaatcgat 124  Q
    ||||||||||||||    
T  38401 tttgtagaatcgat 38414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 61; Significance: 2e-26; HSPs: 2)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 9 - 165
Target Start/End: Original strand, 61087 - 61243
Alignment:
Q  9 caaaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaagga 108  Q
    ||||||||| ||||||||||| ||| ||||| |||||||| ||| |  ||||||   | |||||||||| |||||||| ||||||||||||||| ||  |    
T  61087 caaaggttgccaaaatcgggattttgcttcaggtcaaaagagaaaagtaaaatttaaaatcgtaaaatcacaatcaaaatcgaagaattttacttaacta 61186  T
Q  109 tttttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggatttta 165  Q
     ||||||||||||||||||  ||||| |||||||| || ||||||||||||| ||||    
T  61187 cttttgtagaatcgatatatgaaatcgtaaaatcgtaaccaaaatcgatggacttta 61243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 71 - 165
Target Start/End: Original strand, 48497 - 48591
Alignment:
Q  71 taaaatcgcaatcaaattcgaagaattttactcaaggatttttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggatttta 165  Q
    ||||||| |||||||| |||||| |||||||| ||  | |||||||||||||||| || || || ||||||||| ||||||||||||||| ||||    
T  48497 taaaatctcaatcaaaatcgaaggattttacttaactacttttgtagaatcgataaaagaagtcgtaaaatcgcgatcaaaatcgatggacttta 48591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603 (Bit Score: 58; Significance: 1e-24; HSPs: 2)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 71 - 227
Target Start/End: Original strand, 8794 - 8950
Alignment:
Q  71 taaaatcgcaatcaaattcgaagaattttactcaaggatttttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacctnn 170  Q
    |||||||| ||||||| |||||| |||||||||||  | ||||||||||| ||||||| || |  ||||||||||||||||||||||||||||||||       
T  8794 taaaatcgtaatcaaaatcgaaggattttactcaactacttttgtagaatagatataagaacttgtaaaatcgcaatcaaaatcgatggattttaccaaa 8893  T
Q  171 nnnnnnntaatactaaatatatgttacaaatgatatatagtcataaatgacttagtt 227  Q
           |||| |||||||||||||| || |  ||||||||||||||||||| ||||    
T  8894 acaaagataatgctaaatatatgttataagttgtatatagtcataaatgactcagtt 8950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 166
Target Start/End: Original strand, 8787 - 8824
Alignment:
Q  129 aaaatcataaaatcgcaatcaaaatcgatggattttac 166  Q
    ||||||||||||||| |||||||||||| |||||||||    
T  8787 aaaatcataaaatcgtaatcaaaatcgaaggattttac 8824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 58; Significance: 1e-24; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 11 - 124
Target Start/End: Original strand, 14701 - 14814
Alignment:
Q  11 aaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatt 110  Q
    |||||| ||||||||||| |||||||||||||| ||| ||| ||  ||||| |||| ||||||||||||||||||| |||||| |||||| |||| || |    
T  14701 aaggttatcaaaatcggggctttacttcaagtcgaaatggagtagcaaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttattcaaagact 14800  T
Q  111 tttgtagaatcgat 124  Q
    ||||||||||||||    
T  14801 tttgtagaatcgat 14814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2084 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold2084
Description:

Target: scaffold2084; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 11 - 108
Target Start/End: Complemental strand, 182 - 85
Alignment:
Q  11 aaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaagga 108  Q
    |||||| |||||||||||||||||||||||||||||||||| ||  ||||| |||| ||||||||| | ||| ||| |||||| ||||||||||||||    
T  182 aaggttatcaaaatcgggactttacttcaagtcaaaagggagtagcaaaatcgggactcgtaaaattgtaattaaaatcgaaggattttactcaagga 85  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0526 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0526
Description:

Target: scaffold0526; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 11 - 127
Target Start/End: Complemental strand, 8510 - 8394
Alignment:
Q  11 aaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatt 110  Q
    |||||| |||||||||||| ||||||| ||||| ||||||| ||  |||||||||| || |||||| ||| ||||| |||||| |||||||||||||| |    
T  8510 aaggttatcaaaatcgggagtttactttaagtcgaaagggagtagtaaaattgggactcataaaattgcagtcaaaatcgaaggattttactcaaggagt 8411  T
Q  111 tttgtagaatcgatata 127  Q
    | |||||||| ||||||    
T  8410 tgtgtagaattgatata 8394  T

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Target: scaffold0534 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0534
Description:

Target: scaffold0534; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 11 - 150
Target Start/End: Complemental strand, 1024 - 885
Alignment:
Q  11 aaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatt 110  Q
    |||||| | |||||| ||| ||| ||||| |||||||||||| |  |||||||  | ||||||||| ||||||||| ||||||||||||||||||  | |    
T  1024 aaggtttttaaaatcaggattttgcttcaggtcaaaagggaagagcaaaattgaaaatcgtaaaattgcaatcaaaatcgaagaattttactcaactact 925  T
Q  111 tttgtagaatcgatataaaaaatcataaaatcgcaatcaa 150  Q
    |||||||||  ||||||| ||||  |||||||||||||||    
T  924 tttgtagaacagatataagaaattgtaaaatcgcaatcaa 885  T

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Target: scaffold0417 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 70 - 167
Target Start/End: Original strand, 7289 - 7386
Alignment:
Q  70 gtaaaatcgcaatcaaattcgaagaattttactcaaggatttttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggattttacc 167  Q
    ||||||||| ||||||| |||||| |||||||||||| | |||||| |||| ||||||  ||||  || |||||||||||||||||||| ||||||||    
T  7289 gtaaaatcgtaatcaaaatcgaaggattttactcaagtacttttgttgaatagatataggaaattgtataatcgcaatcaaaatcgatgaattttacc 7386  T

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Target: scaffold0061 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 11 - 124
Target Start/End: Original strand, 76084 - 76196
Alignment:
Q  11 aaggttgtcaaaatcgggactttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatt 110  Q
    |||||||||||||||||||||||||||| |||| ||||| ||||  |||   |||| ||||||||| ||||| ||  |||||| ||||||||||| || |    
T  76084 aaggttgtcaaaatcgggactttacttccagtcgaaaggaaatagcaaacccgggactcgtaaaattgcaat-aagatcgaaggattttactcaaagact 76182  T
Q  111 tttgtagaatcgat 124  Q
    ||||||||||||||    
T  76183 tttgtagaatcgat 76196  T

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Target: scaffold0510 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 68 - 164
Target Start/End: Original strand, 36 - 131
Alignment:
Q  68 tcgtaaaatcgcaatcaaattcgaagaattttactcaaggatttttgtagaatcgatataaaaaatcataaaatcgcaatcaaaatcgatggatttt 164  Q
    ||||||||||| || |||| |||||| |||||||||||  | ||| ||||||||||||||| ||||  ||||||| |||||||||||||||||||||    
T  36 tcgtaaaatcgaaaccaaaatcgaaggattttactcaactacttt-gtagaatcgatataagaaattgtaaaatctcaatcaaaatcgatggatttt 131  T

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Target: scaffold0150 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 70 - 167
Target Start/End: Complemental strand, 33233 - 33131
Alignment:
Q  70 gtaaaatcgcaatcaaattcgaagaattttactcaaggatttttgtagaatcgatataa------aaaatcataaaatcgcaatcaaaatcgatggattt 163  Q
    ||||||||||||||||| |||||||||||||||||   | |||||||||||||||||||       ||||| |||||||||||||||||||||| ||||     
T  33233 gtaaaatcgcaatcaaaatcgaagaattttactcacttacttttgtagaatcgatataagatagcgaaatc-taaaatcgcaatcaaaatcgattgattc 33135  T
Q  164 tacc 167  Q
    ||||    
T  33134 tacc 33131  T

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Target: scaffold0027 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 68 - 124
Target Start/End: Original strand, 132947 - 133003
Alignment:
Q  68 tcgtaaaatcgcaatcaaattcgaagaattttactcaaggatttttgtagaatcgat 124  Q
    ||||||||||||||||||| |||||| ||||| |||||||| |||||||||||||||    
T  132947 tcgtaaaatcgcaatcaaaatcgaaggattttcctcaaggacttttgtagaatcgat 133003  T

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Target: scaffold0182 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 124
Target Start/End: Complemental strand, 24722 - 24627
Alignment:
Q  29 actttacttcaagtcaaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcgaagaattttactcaaggatttttgtagaatcgat 124  Q
    ||||||||||||||| ||||||| ||  ||||| |||| ||||||||| | ||||||| || ||  |||||||||||   ||||||||||||||||    
T  24722 actttacttcaagtcgaaagggagtagcaaaatcgggactcgtaaaattgtaatcaaaatcaaaagattttactcaaatttttttgtagaatcgat 24627  T

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Target: scaffold0028 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 68 - 167
Target Start/End: Complemental strand, 145885 - 145781
Alignment:
Q  68 tcgtaaaatcgcaatcaaattcgaagaattttactcaaggatttttgtagaatcgatataa------aaaatcataaaatcgcaatcaaaatcgatggat 161  Q
    ||||||||| ||||||||| |||||| ||||||||||   | |||||||||||||||||||      |||||| |||||| ||||||||||||||| |||    
T  145885 tcgtaaaatagcaatcaaaatcgaaggattttactcacttacttttgtagaatcgatataagatagcaaaatc-taaaattgcaatcaaaatcgattgat 145787  T
Q  162 tttacc 167  Q
    | ||||    
T  145786 tctacc 145781  T

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Target: scaffold0001 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 127
Target Start/End: Complemental strand, 142923 - 142867
Alignment:
Q  71 taaaatcgcaatcaaattcgaagaattttactcaaggatttttgtagaatcgatata 127  Q
    |||||||||||| ||| | |||| |||||||||||||| ||||||||||| ||||||    
T  142923 taaaatcgcaattaaaattgaaggattttactcaaggagttttgtagaatagatata 142867  T

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Target: scaffold0036 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 158
Target Start/End: Original strand, 37011 - 37047
Alignment:
Q  122 gatataaaaaatcataaaatcgcaatcaaaatcgatg 158  Q
    ||||||||||||  |||||||||||||||||||||||    
T  37011 gatataaaaaatggtaaaatcgcaatcaaaatcgatg 37047  T

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