View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20691_high_23 (Length: 285)
Name: NF20691_high_23
Description: NF20691
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20691_high_23 |
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Alignment Details
Target: chr7 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 267
Target Start/End: Complemental strand, 38027449 - 38027199
Alignment:
| Q |
1 |
aagaacttgcacatcttcacatgggcatgacttaacatccttgtataagatgtataatcctctacctattttacataagaaacaaaaattaatcggtaat |
100 |
Q |
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| T |
38027449 |
aagaacttgcacatcttcacatgggcatgacttaacatccttgtataagatgtataatcctctacctattttacataagaaacaaaaattaatcggtaat |
38027350 |
T |
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| Q |
101 |
aattactatatcatcattgttttgtataaagtaggagtatataaatatatgaacatgaaattatatgaattgaacaagaatggtcaaagaaaaggatcat |
200 |
Q |
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| T |
38027349 |
aattactatatcatcattg----------------agtatataaatatatgaacatgaaattatatgaattgaacaagaatggtcaaagaaaaggatcat |
38027266 |
T |
|
| Q |
201 |
aatgcaaatactagcaaaatgaataaaagaaatgcaatggaattaatgtgactagaattgaaattat |
267 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
38027265 |
aatgcaaatactagcaaaatgaataaaagaaatgcaatggaattaatgtgactagaatttaaattat |
38027199 |
T |
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