View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20691_high_24 (Length: 282)
Name: NF20691_high_24
Description: NF20691
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20691_high_24 |
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Alignment Details
Target: chr8 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 35 - 266
Target Start/End: Original strand, 43017200 - 43017432
Alignment:
| Q |
35 |
tagtatttgttcggttttgttcatttacaagacaaaagatcgtgacttttaagaatttactcatccaaatacatgtggaaagtgagaaaagagctctctc |
134 |
Q |
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| T |
43017200 |
tagtatttgttcggttttgttcatttacaagacaaaagatcgtgactttttagaatttactcatccaaatacatgtggaaagtgagaaaagagctctctc |
43017299 |
T |
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| Q |
135 |
aacttagtgcaattaatgggccactcaatatgttgaaccaaaatgggttgattatgcatggtattgtgcacaagct-agctaaattcattgatttatact |
233 |
Q |
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|| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||||||||||| |||||| |
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| T |
43017300 |
aatttagtgcaattaatgggccactcaatatgttgaaccaaaatgggttgattgtgcatggtattatgcacaagctaagctaaattcattgatctatact |
43017399 |
T |
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| Q |
234 |
aggagtaggaaaggttttatatatgtatgtggt |
266 |
Q |
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|||||| |||||||||||||| ||||||||||| |
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| T |
43017400 |
aggagtgggaaaggttttataaatgtatgtggt |
43017432 |
T |
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