View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20691_low_28 (Length: 276)
Name: NF20691_low_28
Description: NF20691
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20691_low_28 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 268; Significance: 1e-150; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 268; E-Value: 1e-150
Query Start/End: Original strand, 1 - 276
Target Start/End: Complemental strand, 14865775 - 14865500
Alignment:
| Q |
1 |
tcgaagaatatacatcatatcatatgatatataatattcaaatttagttgtggtatatgaaaatggcaacactaccaccattagtaaacttaatgtagta |
100 |
Q |
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| T |
14865775 |
tcgatgaatatacatcatatcatatgatatataatattcaaatttagttgtggtatatgaaaatggcaacactaccaccattagtaaacttaatgtagta |
14865676 |
T |
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| Q |
101 |
aataataaagtagaaagtgatccacatcacacatatattaagtgaacaataagcaacataaagacgctctctttggtgtgtaatttctcttttcccttta |
200 |
Q |
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| T |
14865675 |
aataataaagtagaaagtgatccacatcacacgtatattaagtgaacaataagcaacataaagacgctctctttggtgtgtaatttctcttttcccttta |
14865576 |
T |
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| Q |
201 |
ttacttcacaaccccacaatctcaacggttcaaaacccaacgtctccaaaactatacctcatacatttatatattt |
276 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
14865575 |
ttacttcacaaccccacaatctcaacggttcaaaacccaacgtctccaaaactatacctcatacatttatatattt |
14865500 |
T |
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