View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20691_low_32 (Length: 240)
Name: NF20691_low_32
Description: NF20691
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20691_low_32 |
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Alignment Details
Target: chr7 (Bit Score: 179; Significance: 1e-96; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 18 - 236
Target Start/End: Original strand, 22250962 - 22251180
Alignment:
| Q |
18 |
aaaacctcacatgcaaaaagaaaaatatacataaagaatatttagaactggcaaagaatatttatgtaacaaggagtgtaaccgagaaaattaaaacgtc |
117 |
Q |
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| T |
22250962 |
aaaacctcacatgcaaaaataaaaatatacataaagaatatttagaactggcaaagaatatttatgtaataaggagtgtaactgagaaaattaacacgtc |
22251061 |
T |
|
| Q |
118 |
aattatttctgggttacacttcatgttacataaatattctctgtcaattctgaatcttcggcttgcctgttagcattcacatgtctattgtctcattgtt |
217 |
Q |
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|||||||||| |||||||||| ||||||||||||||| |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| |
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| T |
22251062 |
aattatttctaagttacacttcctgttacataaatattttctgtcaattctgaatcttcagcttgcctgttagcgttcacatgtctattgtctcattgtt |
22251161 |
T |
|
| Q |
218 |
tttattttgcaggtcttca |
236 |
Q |
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||||||||||||||||||| |
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| T |
22251162 |
tttattttgcaggtcttca |
22251180 |
T |
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