View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF20691_low_5 (Length: 577)
Name: NF20691_low_5
Description: NF20691
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20691_low_5 |
 | |
|
| [»] scaffold0475 (2 HSPs) |
| | |
|
| [»] scaffold0288 (2 HSPs) |
| | |
|
| [»] scaffold0199 (1 HSPs) |
| | |
|
| [»] scaffold0477 (1 HSPs) |
| | |
|
Alignment Details
Target: chr6 (Bit Score: 536; Significance: 0; HSPs: 33)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 536; E-Value: 0
Query Start/End: Original strand, 1 - 568
Target Start/End: Complemental strand, 4462779 - 4462212
Alignment:
| Q |
1 |
aattttgcaaagacaaagccacatgctgtgttgattccatgtccatcccaaggccatatcaatgcattgttgaaactaggaaaactacttcatcttagag |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
4462779 |
aattttgcaaagacaaagccacatgctgtgttgattccatgtccatcccaaggccatatcaatgcattgttgaaactaggaaaactacttcaccttagag |
4462680 |
T |
|
| Q |
101 |
gttttcacataacctttgtcaacactgaatacaatcacaattgcttgctcaattcaagaggtcctaattctcttgatggtttcactgactttaactttga |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
4462679 |
gttttcacataacctttgtcaacactgaatacaatcacaattgcttgctcaattcaagaggtcctaattctctagatggtttcactgactttaactttga |
4462580 |
T |
|
| Q |
201 |
gaccattccaaatggttttacaacaatggaaactggtgatgtttttcaagacgtacacttattttttcaatcaatcatgatgaacttcattcaacccttt |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4462579 |
gaccattccaaatggttttacaacaatggaaactggtgatgtttttcaagacgtacacttattttttcaatcaatcatgatgaacttcattcaacccttt |
4462480 |
T |
|
| Q |
301 |
ggtgaactccttacaagacttgatgcctctgccactaccggtcttatccctccggttacttgcatagtttctgattgttacatgccatttacagtggatg |
400 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4462479 |
agtgaacttcttacaagacttgatgcctctgccactgccgatcttatccctccggttacttgcatagtttctgattgttacatgccatttacagtggatg |
4462380 |
T |
|
| Q |
401 |
ccgctgaacaacgtgcactcccaatcgttctcttttccccggtcagtgcatgttgctcactcactacttctcacattcctaaattgtttcagaatggtgt |
500 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4462379 |
ccgctgaacaacgtgcactcccaatcgttctcttttccccggtcagtgcatgttgctcactcactacttctcacattcctaaattgtttcagaatggtgt |
4462280 |
T |
|
| Q |
501 |
gctgccactcaaaggtatgtcatctttgttccctttttcttcctaagagaggttcgttgtgtctgtgc |
568 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
4462279 |
gctgccactcaaaggtatatcatctttgttccctttttcttcctaagagaggtttgttgtgtctgtgc |
4462212 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 393; E-Value: 0
Query Start/End: Original strand, 1 - 561
Target Start/End: Complemental strand, 4471486 - 4470926
Alignment:
| Q |
1 |
aattttgcaaagacaaagccacatgctgtgttgattccatgtccatcccaaggccatatcaatgcattgttgaaactaggaaaactacttcatcttagag |
100 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||||| ||| || ||||| ||||||| |
|
|
| T |
4471486 |
aattttgcaaagacaaagccacatgctgtattgattccatgtccagctcaaggccatatcaatgcattgttgaaactagcaaagcttcttcaccttagag |
4471387 |
T |
|
| Q |
101 |
gttttcacataacctttgtcaacactgaatacaatcacaattgcttgctcaattcaagaggtcctaattctcttgatggtttcactgactttaactttga |
200 |
Q |
| |
|
| ||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
4471386 |
gctttcacataacgtttgtcaacactgaatacaatcacaaagccttgctcaattcaagaggtcctgattctcttgatggtttcactgactttaactttga |
4471287 |
T |
|
| Q |
201 |
gaccattccaaatggttttacaacaatggaaactggtgatgtttttcaagacgtacacttattttttcaatcaatcatgatgaacttcattcaacccttt |
300 |
Q |
| |
|
||||||||||||||||||||| ||||||||| ||||||| || |||||||| |||||| ||||||| ||||||||||| | ||||| ||||||||||| |
|
|
| T |
4471286 |
gaccattccaaatggttttactgcaatggaaagtggtgatcttattcaagacatacactccttttttcgatcaatcatgacggacttccttcaacccttt |
4471187 |
T |
|
| Q |
301 |
ggtgaactccttacaagacttgatgcctctgccactaccggtcttatccctccggttacttgcatagtttctgattgttacatgccatttacagtggatg |
400 |
Q |
| |
|
|||||||| ||||| ||||||||||||||||||||| | |||||||||||||| |||||||||||| |||||||||||||||||||||||||||| |||| |
|
|
| T |
4471186 |
ggtgaacttcttactagacttgatgcctctgccactgctggtcttatccctccagttacttgcataatttctgattgttacatgccatttacagtagatg |
4471087 |
T |
|
| Q |
401 |
ccgctgaacaacgtgcactcccaatcgttctcttttccccggtcagtgcatgttgctcactcactacttctcacattcctaaattgtttcagaatggtgt |
500 |
Q |
| |
|
| |||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4471086 |
ctgctgaagaacgtgcactcccaatcgttctcttttctccggtcagcgcatgttgctcactcactacttctcacattcctaaattgtttcagaatggtgt |
4470987 |
T |
|
| Q |
501 |
gctgccactcaaaggtatgtcatctttgttccctttttcttcctaagagaggttcgttgtg |
561 |
Q |
| |
|
|||||||||||||||||| ||||||| ||||||||||||||| || ||||| || |||||| |
|
|
| T |
4470986 |
gctgccactcaaaggtatatcatcttcgttccctttttcttcttatgagagttttgttgtg |
4470926 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 19 - 550
Target Start/End: Complemental strand, 4482419 - 4481885
Alignment:
| Q |
19 |
ccacatgctgtgttgattccatgtccatcccaaggccatatcaatgcattgttgaaactaggaaaactacttcatcttagaggttttcacataacctttg |
118 |
Q |
| |
|
|||||||| ||||||| ||||| |||| | ||||||||||||||||||||||||||| |||||||||||||||| |||||||| |||||||||||||||| |
|
|
| T |
4482419 |
ccacatgcagtgttgactccatttccagctcaaggccatatcaatgcattgttgaaaataggaaaactacttcaccttagaggctttcacataacctttg |
4482320 |
T |
|
| Q |
119 |
tcaacactgaatacaatcacaattgcttgctcaattcaagaggtcctaattctcttgatggtttcactgactttaactttgagaccattccaaatggttt |
218 |
Q |
| |
|
||||||| |||||||||||||| | ||||| || ||||| ||||| || | |||||||||||||||| |||| |||||| || || ||| ||||||| |
|
|
| T |
4482319 |
tcaacaccgaatacaatcacaaacgtttgctaaaatcaaggggtccaaaagcctttgatggtttcactgattttacctttgaaacgataccagatggttt |
4482220 |
T |
|
| Q |
219 |
tacaacaatggaaactggtgatgtttt---tcaagacgtacacttattttttcaatcaatcatgatgaacttcattcaaccctttggtgaactccttaca |
315 |
Q |
| |
|
|| |||| ||| || ||||| | ||||||| || || || |||||||||||||| |||||| || ||||| |||| | || | |
|
|
| T |
4482219 |
aactccaattgaaggtgatgatgaagtaagtcaagacttattctctcttactcaatcaatcatgacgaactttcgccacttctttgatgaatttctggct |
4482120 |
T |
|
| Q |
316 |
agacttgatgcctctgccactaccggtcttatccctccggttacttgcatagtttctgattgttacatgccatttacagtggatgccgctgaacaacgtg |
415 |
Q |
| |
|
| |||| ||| ||||||||| | ||| ||||||| || || |||||| ||||||||||||| ||||||||||||||||| ||||| || ||| ||| || |
|
|
| T |
4482119 |
aaacttcatgaatctgccactgctggtattatccccccagtcacttgcttagtttctgattgctacatgccatttacagtagatgctgccgaagaacatg |
4482020 |
T |
|
| Q |
416 |
cactcccaatcgttctcttttccccggtcagtgcatgttgctcactcactacttctcacattcctaaattgtttcagaatggtgtgctgccactcaaagg |
515 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||| || |||| |||||||| ||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
4482019 |
cactcccaattgttctcttttccccggtcagtgcatgttacttactctctacttctttgattcctaaattgtttcagaatggtgtgctaccactcaaagg |
4481920 |
T |
|
| Q |
516 |
tatgtcatctttgttccctttttcttcctaagaga |
550 |
Q |
| |
|
||| |||| | ||||| ||||||||| |||||||| |
|
|
| T |
4481919 |
tatatcatttatgttctctttttctttctaagaga |
4481885 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 1 - 437
Target Start/End: Original strand, 4265613 - 4266052
Alignment:
| Q |
1 |
aattttgcaaagacaaagccacatgctgtgttgattccatgtccatcccaaggccatatcaatgcattgttgaaactaggaaaactacttcatcttagag |
100 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| || |||||||| || ||||| ||||||| |
|
|
| T |
4265613 |
aattttgcaaagccaaagccacatgctgtgttgattccagctccatttcaaggccatatcaatgcattgttcaatctaggaaagcttcttcaccttagag |
4265712 |
T |
|
| Q |
101 |
gttttcacataacctttgtcaacactgaatacaatcacaattgcttgctcaattcaagaggtcctaattctcttgatggtttcactgactttaactttga |
200 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||| ||||||||| ||||| |
|
|
| T |
4265713 |
gctttcacataacctttgtcaacactgaatacaatcacaaacgcttgctcaaatcaagaggtccaaattctcttgatggtttcagtgactttaagtttga |
4265812 |
T |
|
| Q |
201 |
gaccattccaaatggttttacaacaatggaa---actggtgatgtttttcaagacgtacacttattttttcaatcaatcatgatgaacttcattcaaccc |
297 |
Q |
| |
|
|||||| ||| ||||| | || |||||||| | |||||||| | ||||||| || || || | ||||||||||||| ||||||| |||||||| |
|
|
| T |
4265813 |
gaccataccagatggtctaactccaatggaaggcaatggtgatgctactcaagacatataccctcttgtgcaatcaatcatgacgaacttccttcaaccc |
4265912 |
T |
|
| Q |
298 |
tttggtgaactccttacaagacttgatgcctctgccactaccggtcttatccctccggttacttgcatagtttctgattgttacatgccatttacagtgg |
397 |
Q |
| |
|
|||| |||||| ||||| |||||| || ||||||| | ||| |||| || || |||||||| | ||||| |||||||||||||| |||||| | | |
|
|
| T |
4265913 |
tttgatgaacttcttactagacttcatcaatctgccaatgatggttttattccaccaattacttgcttggtttccgattgttacatgccttttacaatag |
4266012 |
T |
|
| Q |
398 |
atgccgctgaacaacgtgcactcccaatcgttctcttttc |
437 |
Q |
| |
|
|||| || ||| ||| ||||||||||||| || ||||||| |
|
|
| T |
4266013 |
atgctgcggaagaacatgcactcccaatccttttcttttc |
4266052 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 15 - 562
Target Start/End: Original strand, 4488767 - 4489315
Alignment:
| Q |
15 |
aaagccacatgctgtgttgattccatgtccatcccaaggccatatcaatgcattgttgaaactaggaaaactacttcatcttagaggttttcacataacc |
114 |
Q |
| |
|
|||||||||||| ||||| | |||| |||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| |
|
|
| T |
4488767 |
aaagccacatgcagtgttaacaccatttccagttcaaggccatatcaatgcattgttgaaactaggaaaactacttcaccttagaggatttcacataacc |
4488866 |
T |
|
| Q |
115 |
tttgtcaacactgaatacaatcacaattgcttgctcaattcaagaggtcctaattctcttgatggtttcactgactttaactttgagaccattccaaatg |
214 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||| ||||||||||| ||| | |||||||||| ||||| |||| ||||||||| |||||| ||| |
|
|
| T |
4488867 |
tttgtcaacactgaatacaatcacaaacgcttgctcaaatcaagaggtccaaatgcctttgatggtttaactgattttagctttgagactattccagatg |
4488966 |
T |
|
| Q |
215 |
gttt---tacaaca-atggaaactggtgatgtttttcaagacgtacacttattttttcaatcaatcatgatgaacttcattcaaccctttggtgaactcc |
310 |
Q |
| |
|
|||| | ||||| |||| | ||| |||||| |||||| ||| | ||| || ||||||||||| || || ||| |||||||| | | | |
|
|
| T |
4488967 |
gtttaactccaacagatggtga-tggcgatgttagtcaagatttacgcgctctttgtctatcaatcatgaacaattttcaccaattctttggtgtatttc |
4489065 |
T |
|
| Q |
311 |
ttacaagacttgatgcctctgccactaccggtcttatccctccggttacttgcatagtttctgattgttacatgccatttacagtggatgccgctgaaca |
410 |
Q |
| |
|
|| | | |||| ||| |||||| ||| | |||||||||||||| ||||||||| ||||||||||||| | ||| |||||||||| ||||| |||||| | |
|
|
| T |
4489066 |
ttgctaaacttaatgactctgctactgctggtcttatccctccagttacttgcttagtttctgattgcaatatggcatttacagtagatgctgctgaaga |
4489165 |
T |
|
| Q |
411 |
acgtgcactcccaatcgttctcttttccccggtcagtgcatgttgctcactcactacttctcacattcctaaattgtttcagaatggtgtgctgccactc |
510 |
Q |
| |
|
|| |||||||||||| |||||||||||||| ||||||| || || | |||||| ||||||| ||||||||||||||||||||||||| |||||| |
|
|
| T |
4489166 |
acatgcactcccaattgttctcttttccccatgtagtgcatcttacttctactctacttttcacattactaaattgtttcagaatggtgtgctaccactc |
4489265 |
T |
|
| Q |
511 |
aaaggtatgtcatctttgttccctttttcttcctaagagaggttcgttgtgt |
562 |
Q |
| |
|
||||||| |||| | ||||||||||||| ||||||| ||||| ||||||| |
|
|
| T |
4489266 |
aaaggta-atcat-tatgttccctttttcatcctaagggaggtatgttgtgt |
4489315 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 15 - 440
Target Start/End: Complemental strand, 4576013 - 4575585
Alignment:
| Q |
15 |
aaagccacatgctgtgttgattccatgtccatcccaaggccatatcaatgcattgttgaaactaggaaaactacttcatcttagaggttttcacataacc |
114 |
Q |
| |
|
|||||||||||| ||||| | ||||| |||| ||||||||||||||||||||||||||| ||| |||||| ||||| |||||||| |||||||||||| |
|
|
| T |
4576013 |
aaagccacatgcagtgttaactccatttccagttcaaggccatatcaatgcattgttgaaaatagcaaaactgcttcaccttagaggctttcacataacc |
4575914 |
T |
|
| Q |
115 |
tttgtcaacactgaatacaatcacaattgcttgctcaattcaagaggtcctaattctcttgatggtttcactgactttaactttgagaccattccaaatg |
214 |
Q |
| |
|
||||| |||||||||||||||||||| | |||||||| ||||||||| ||| | ||||||||||||||||||||||||||||||| || ||| ||| |
|
|
| T |
4575913 |
tttgttaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcactgactttaactttgagactataccagatg |
4575814 |
T |
|
| Q |
215 |
gttttacaacaatgga---aactggtgatgtttttcaagacgtacacttattttttcaatcaatcatgatgaacttcattcaaccctttggtgaactcct |
311 |
Q |
| |
|
|||| || ||| ||| | ||||||||| ||||||| |||||| || | |||||||||| | |||||| || ||||| |||||| || |
|
|
| T |
4575813 |
gtttaactccaaaggatggtaatggtgatgtaagtcaagacctacactctcttggtgaatcaatcataacgaactttcgccacttctttgatgaacttct |
4575714 |
T |
|
| Q |
312 |
tacaagacttgatgcctctgccactaccggtcttatccctccggttacttgcatagtttctgattgttacatgccatttacagtggatgccgctgaacaa |
411 |
Q |
| |
|
| | | |||| | | |||||||||| | ||||||||||| || || |||||| ||||||||||||| ||||||||||||||||| ||||| |||||| || |
|
|
| T |
4575713 |
tgctaaacttcaagactctgccactgctggtcttatccccccagtcacttgcttagtttctgattgctacatgccatttacagtagatgctgctgaagaa |
4575614 |
T |
|
| Q |
412 |
cgtgcactcccaatcgttctcttttcccc |
440 |
Q |
| |
|
| ||| |||||||| ||||| |||||||| |
|
|
| T |
4575613 |
catgccctcccaattgttcttttttcccc |
4575585 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 15 - 440
Target Start/End: Complemental strand, 4623865 - 4623437
Alignment:
| Q |
15 |
aaagccacatgctgtgttgattccatgtccatcccaaggccatatcaatgcattgttgaaactaggaaaactacttcatcttagaggttttcacataacc |
114 |
Q |
| |
|
|||||||||||||||||||||| ||| |||| ||||| ||||||||| ||||||| ||||||| ||| || ||| | |||| ||| |||||||||||| |
|
|
| T |
4623865 |
aaagccacatgctgtgttgattgcatatccagttcaaggtcatatcaatccattgttcaaactagcaaagcttctttaccttaaaggctttcacataacc |
4623766 |
T |
|
| Q |
115 |
tttgtcaacactgaatacaatcacaattgcttgctcaattcaagaggtcctaattctcttgatggtttcactgactttaactttgagaccattccaaatg |
214 |
Q |
| |
|
|||| |||| |||||||||||||| |||||||||| ||||||||||| || | ||||||||||||| |||||||||||||||||||||||| ||| |
|
|
| T |
4623765 |
tttggtcacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaaggcctttgatggtttcacggactttaactttgagaccattccagatg |
4623666 |
T |
|
| Q |
215 |
gttttacaacaatggaa---actggtgatgtttttcaagacgtacacttattttttcaatcaatcatgatgaacttcattcaaccctttggtgaactcct |
311 |
Q |
| |
|
|||| ||| |||||||| |||||||||| ||||||| ||| || ||| | | ||||| | || ||| ||| ||| |||||| ||||||| || |
|
|
| T |
4623665 |
gtttaacaccaatggaaggtgatggtgatgttagtcaagacataccctctctttctgattcaataaggaagaatttctatcatcccttttgtgaacttct |
4623566 |
T |
|
| Q |
312 |
tacaagacttgatgcctctgccactaccggtcttatccctccggttacttgcatagtttctgattgttacatgccatttacagtggatgccgctgaacaa |
411 |
Q |
| |
|
| ||| |||| ||| |||||||||| | |||||| | || || ||||||||| ||||||| |||||||||||| |||||||| | | || |||||| | |
|
|
| T |
4623565 |
tgcaaaacttcatgactctgccactgctggtcttgttccaccagttacttgcttagtttccgattgttacatgtcatttacaatacaagctgctgaagag |
4623466 |
T |
|
| Q |
412 |
cgtgcactcccaatcgttctcttttcccc |
440 |
Q |
| |
|
| |||||||||||| ||| |||| ||||| |
|
|
| T |
4623465 |
catgcactcccaattgttttcttctcccc |
4623437 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 4 - 550
Target Start/End: Complemental strand, 3173572 - 3173022
Alignment:
| Q |
4 |
tttgcaaagacaaagccacatgctgtgttgattccatgtccatcccaaggccatatcaatgcattgttgaaactaggaaaactacttcatcttagaggtt |
103 |
Q |
| |
|
|||||||||| ||| |||||||| ||||| | ||||| |||| ||||||||||||||||||||||||||||||| |||||||||||| ||||||| | |
|
|
| T |
3173572 |
tttgcaaagagaaaaccacatgcagtgttaactccatatccagttcaaggccatatcaatgcattgttgaaactagcaaaactacttcactttagaggct |
3173473 |
T |
|
| Q |
104 |
ttcacataacctttgtcaacactgaatacaatcacaattgcttgctcaattcaagaggtcctaattctcttgatggtttcactgactttaactttgagac |
203 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||| | |||||||| |||| ||||| ||| | |||||||||||| ||| |||||||||||||| |
|
|
| T |
3173472 |
ttcacataacctttgtaaacactgaatacaatcacaaacggttgctcaaatcaaagggtccaaatgcctttgatggtttcaatgattttaactttgagac |
3173373 |
T |
|
| Q |
204 |
cattccaaatggttttacaacaatggaa---actggtgatgtttttcaagacgtacacttattttttcaatcaatcatgatgaacttcattcaacccttt |
300 |
Q |
| |
|
|| ||| ||||||| || |||||||| |||||||||| ||||||| ||| | ||| || ||||||||| | |||||| || ||| |
|
|
| T |
3173372 |
tataccagatggtttaacttcaatggaaggtgatggtgatgttagtcaagacttacgcgctctttgtcgatcaatcatcaagaactttcatcgctttttt |
3173273 |
T |
|
| Q |
301 |
ggtgaactccttacaagacttgatgcctctgccactaccggtcttatccctccggttacttgcatagtttctgattgttacatgccatttacagtggatg |
400 |
Q |
| |
|
||||||| || | | |||| | | ||||| ||| | |||||||| ||||| ||||||||| | ||||| ||||| || |||||||||||||| |||| |
|
|
| T |
3173272 |
cgtgaactttttgctaaacttcacgattctgcaactgctggtcttatacctccagttacttgctttgtttccgattgctatatgccatttacagtagatg |
3173173 |
T |
|
| Q |
401 |
ccgctgaacaacgtgcactcccaatcgttctcttttccccggtcagtgcatgttgctcactcactacttctcacattcctaaattgtttcagaatggtgt |
500 |
Q |
| |
|
|||||| ||| ||| |||||||| ||||| ||||| ||| |||||||||| || | || || ||| |||||||||||||||||||||||| | |
|
|
| T |
3173172 |
ttgctgaagaacatgctctcccaattgttctattttcgccgtgtagtgcatgtttcttcttggctggttttcatattcctaaattgtttcagaatggtct |
3173073 |
T |
|
| Q |
501 |
gctgccactcaaaggt-atgtcatctttgttccctttttcttcctaagaga |
550 |
Q |
| |
|
|| |||||||||||| || |||| | | |||||||||||||| |||||| |
|
|
| T |
3173072 |
actaccactcaaaggtaatatcatttataatccctttttcttccaaagaga |
3173022 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 4 - 231
Target Start/End: Complemental strand, 4618870 - 4618643
Alignment:
| Q |
4 |
tttgcaaagacaaagccacatgctgtgttgattccatgtccatcccaaggccatatcaatgcattgttgaaactaggaaaactacttcatcttagaggtt |
103 |
Q |
| |
|
|||||||| | ||| ||||||| |||| ||||||||| |||| ||||||||||||||| ||||||| ||||||| ||| || ||||| |||||||| | |
|
|
| T |
4618870 |
tttgcaaacagaaaaccacatgttgtgatgattccatatccagttcaaggccatatcaatccattgttcaaactagcaaagcttcttcaccttagaggct |
4618771 |
T |
|
| Q |
104 |
ttcacataacctttgtcaacactgaatacaatcacaattgcttgctcaattcaagaggtcctaattctcttgatggtttcactgactttaactttgagac |
203 |
Q |
| |
|
|||||||||||||||| ||||| |||||||||||||| |||||||||| ||||||||||| || || ||||||||||||| |||||||||||||||| |
|
|
| T |
4618770 |
ttcacataacctttgttaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaaggcttttgatggtttcacggactttaactttgagag |
4618671 |
T |
|
| Q |
204 |
cattccaaatggttttacaacaatggaa |
231 |
Q |
| |
|
||||||| ||||||| ||| |||||||| |
|
|
| T |
4618670 |
cattccagatggtttaacaccaatggaa |
4618643 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 4507483 - 4507281
Alignment:
| Q |
1 |
aattttgcaaagacaaagccacatgctgtgttgattccatgtccatcccaaggccatatcaatgcattgttgaaactaggaaaactacttcatcttagag |
100 |
Q |
| |
|
||||||||||||| ||| |||||||||||||||||||||| |||| | ||||||||||||||| ||||||| ||||||| || || ||||| ||| ||| |
|
|
| T |
4507483 |
aattttgcaaagagaaaaccacatgctgtgttgattccatatccaactcaaggccatatcaatccattgttcaaactagctaagcttcttcaccttcgag |
4507384 |
T |
|
| Q |
101 |
gttttcacataacctttgtcaacactgaatacaatcacaattgcttgctcaattcaagaggtcctaattctcttgatggtttcactgactttaactttga |
200 |
Q |
| |
|
| ||||||||||||||||| ||||| |||||||||||||| |||||||||| ||||||||| ||| | |||||||||||||||| ||||||||||| |
|
|
| T |
4507383 |
gctttcacataacctttgttaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtgaaaatgcctttgatggtttcactgattttaactttga |
4507284 |
T |
|
| Q |
201 |
gac |
203 |
Q |
| |
|
||| |
|
|
| T |
4507283 |
gac |
4507281 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 16 - 218
Target Start/End: Complemental strand, 4627707 - 4627505
Alignment:
| Q |
16 |
aagccacatgctgtgttgattccatgtccatcccaaggccatatcaatgcattgttgaaactaggaaaactacttcatcttagaggttttcacataacct |
115 |
Q |
| |
|
||||||||||||||||||||||||| |||| ||||||||||||||| ||||||||| ||||| |||| ||||||| |||||||| ||||||||||||| |
|
|
| T |
4627707 |
aagccacatgctgtgttgattccatttccacttcaaggccatatcaatccattgttgatactagcaaaattacttcaccttagaggctttcacataacct |
4627608 |
T |
|
| Q |
116 |
ttgtcaacactgaatacaatcacaattgcttgctcaattcaagaggtcctaattctcttgatggtttcactgactttaactttgagaccattccaaatgg |
215 |
Q |
| |
|
||||||||||||||||||||||||| | |||||||| ||||||||| ||| | ||||||||||| ||| |||| |||||||||||| ||| |||| |
|
|
| T |
4627607 |
ttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccataccagatgg |
4627508 |
T |
|
| Q |
216 |
ttt |
218 |
Q |
| |
|
||| |
|
|
| T |
4627507 |
ttt |
4627505 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 15 - 391
Target Start/End: Original strand, 4258746 - 4259125
Alignment:
| Q |
15 |
aaagccacatgctgtgttgattccatgtccatcccaaggccatatcaatgcattgttgaaactaggaaaactacttcatcttagaggttttcacataacc |
114 |
Q |
| |
|
|||||||||||||||||||||||||| |||| | ||||||||||||||| ||||||| ||||||| || || ||||| ||| |||||||||||||||| |
|
|
| T |
4258746 |
aaagccacatgctgtgttgattccatatccagctcaaggccatatcaatccattgttcaaactagctaagcttcttcactttaaaggttttcacataacc |
4258845 |
T |
|
| Q |
115 |
tttgtcaacactgaatacaatcacaattgcttgctcaattcaagaggtcctaattctcttgatggtttcactgactttaactttgagaccattccaaatg |
214 |
Q |
| |
|
||||||||||||||||| |||||||| | |||||||| ||||||||| ||| | |||||||||||| ||| |||| ||||||||| |||| | ||| |
|
|
| T |
4258846 |
tttgtcaacactgaatataatcacaaacgtttgctcaaatcaagaggtgaaaatgccgttgatggtttcattgattttacctttgagactattcaagatg |
4258945 |
T |
|
| Q |
215 |
gttttacaacaatggaa---actggtgatgtttttcaagacgtacacttattttttcaatcaatcatgatgaacttcattcaaccctttggtgaactcct |
311 |
Q |
| |
|
|| | || || ||||| ||| |||||| ||||||||||| || ||| |||||| || | | ||||||| |||| |||||||||||||| || |
|
|
| T |
4258946 |
gtctgactccagtggaaggtgatggcgatgttactcaagacgtaccctccctttctcaatctataagaaagaacttccttcagccctttggtgaacttct |
4259045 |
T |
|
| Q |
312 |
tacaagacttgatgcctctgccactaccggtcttatccctccggttacttgcatagtttctgattgttacatgccattta |
391 |
Q |
| |
|
| | | |||| | | ||| |||||||| ||| || | || || ||||||||| |||||||||||||||||||| |||||| |
|
|
| T |
4259046 |
tgctaaacttcaagactcagccactactggtattgttccacctgttacttgcttagtttctgattgttacatgtcattta |
4259125 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 19 - 218
Target Start/End: Complemental strand, 4558679 - 4558480
Alignment:
| Q |
19 |
ccacatgctgtgttgattccatgtccatcccaaggccatatcaatgcattgttgaaactaggaaaactacttcatcttagaggttttcacataacctttg |
118 |
Q |
| |
|
|||||||||||||| ||||||| |||| ||||||||||||||| ||||||||||||||| |||||| ||||| |||||||| ||||||||||||| || |
|
|
| T |
4558679 |
ccacatgctgtgttaattccatatccagttcaaggccatatcaatccattgttgaaactagcaaaacttcttcaccttagaggatttcacataacctatg |
4558580 |
T |
|
| Q |
119 |
tcaacactgaatacaatcacaattgcttgctcaattcaagaggtcctaattctcttgatggtttcactgactttaactttgagaccattccaaatggttt |
218 |
Q |
| |
|
| |||||||||||||| ||||| | |||||||| ||||||||||| ||| | |||||||||||||||| |||| ||||||||| ||||| ||||||| |
|
|
| T |
4558579 |
taaacactgaatacaaccacaaacggttgctcaagtcaagaggtccaaatgcctttgatggtttcactgattttagctttgagactattccggatggttt |
4558480 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 19 - 218
Target Start/End: Original strand, 4513553 - 4513752
Alignment:
| Q |
19 |
ccacatgctgtgttgattccatgtccatcccaaggccatatcaatgcattgttgaaactaggaaaactacttcatcttagaggttttcacataacctttg |
118 |
Q |
| |
|
|||||||||||||||||||||| |||| ||||||||||||||| || |||| | | ||| |||||||||||| |||||||| |||||||||||||||| |
|
|
| T |
4513553 |
ccacatgctgtgttgattccatatccacttcaaggccatatcaatccaatgttcagattagcaaaactacttcaccttagaggctttcacataacctttg |
4513652 |
T |
|
| Q |
119 |
tcaacactgaatacaatcacaattgcttgctcaattcaagaggtcctaattctcttgatggtttcactgactttaactttgagaccattccaaatggttt |
218 |
Q |
| |
|
| ||||| |||||||||||||| | |||||||| ||||||||||||||| || ||||||||||||| || ||| ||||||||| ||||| ||||||| |
|
|
| T |
4513653 |
ttaacaccgaatacaatcacaaacgtttgctcaaatcaagaggtcctaatgcttttgatggtttcaccgattttcgctttgagactattcctgatggttt |
4513752 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 16 - 218
Target Start/End: Complemental strand, 4517897 - 4517695
Alignment:
| Q |
16 |
aagccacatgctgtgttgattccatgtccatcccaaggccatatcaatgcattgttgaaactaggaaaactacttcatcttagaggttttcacataacct |
115 |
Q |
| |
|
||||||||||| ||| | | ||||| |||| ||||||||||||||| | ||||| ||||||| |||||| |||||||||||||| ||||||||||||| |
|
|
| T |
4517897 |
aagccacatgcagtgataactccatatccacttcaaggccatatcaatccgttgttaaaactagcaaaacttcttcatcttagaggctttcacataacct |
4517798 |
T |
|
| Q |
116 |
ttgtcaacactgaatacaatcacaattgcttgctcaattcaagaggtcctaattctcttgatggtttcactgactttaactttgagaccattccaaatgg |
215 |
Q |
| |
|
|||||||||| |||||||||||||| | |||||||| ||||||||||| || | |||||||||||||||| |||| ||||||||| |||||| |||| |
|
|
| T |
4517797 |
ttgtcaacaccgaatacaatcacaaacgtttgctcaaatcaagaggtccaaaagcctttgatggtttcactgattttacctttgagactattccagatgg |
4517698 |
T |
|
| Q |
216 |
ttt |
218 |
Q |
| |
|
||| |
|
|
| T |
4517697 |
ttt |
4517695 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 4 - 168
Target Start/End: Complemental strand, 4603679 - 4603515
Alignment:
| Q |
4 |
tttgcaaagacaaagccacatgctgtgttgattccatgtccatcccaaggccatatcaatgcattgttgaaactaggaaaactacttcatcttagaggtt |
103 |
Q |
| |
|
|||||||| | ||| | |||||||||||||||||||| |||| ||||||||||||||| || |||||||||||| ||||||| |||| |||||||| | |
|
|
| T |
4603679 |
tttgcaaacagaaaacaacatgctgtgttgattccatatccacttcaaggccatatcaatccaatgttgaaactagcaaaactatttcaccttagaggat |
4603580 |
T |
|
| Q |
104 |
ttcacataacctttgtcaacactgaatacaatcacaattgcttgctcaattcaagaggtcctaat |
168 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||| | |||||||| ||||||||||||||| |
|
|
| T |
4603579 |
ttcacataacctttgtcaacaccgaatacaatcacaaacgtttgctcaaatcaagaggtcctaat |
4603515 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 95 - 517
Target Start/End: Original strand, 4502943 - 4503368
Alignment:
| Q |
95 |
ttagaggttttcacataacctttgtcaacactgaatacaatcacaattgcttgctcaattcaagaggtcctaattctcttgatggtttcactgactttaa |
194 |
Q |
| |
|
||||||| ||||||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||| ||| | |||||||||||| ||| |||| |
|
|
| T |
4502943 |
ttagaggatttcacataacctttgtcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaatgcctttgatggtttcaatgattttac |
4503042 |
T |
|
| Q |
195 |
ctttgagaccattccaaatggttttacaacaatggaa---actggtgatgtttttcaagacgtacacttattttttcaatcaatcatgatgaacttcatt |
291 |
Q |
| |
|
|||||||||||| ||| ||||||| || | ||||| |||||||||| ||||||| ||| | | | || |||||||| || ||| || |
|
|
| T |
4503043 |
ctttgagaccataccagatggtttaactccggtggaaggtgatggtgatgttagtcaagacttacgcgctctctatctatcaatcaagaagaattttcac |
4503142 |
T |
|
| Q |
292 |
caaccctttggtgaactccttacaagacttgatgcctctgccactaccggtcttatccctccggttacttgcatagtttctgattgttacatgccattta |
391 |
Q |
| |
|
||| |||||||||| | ||| | |||| ||| |||||||||| | |||||||||||||| ||||||||| ||||||||||||| ||||||||||| |
|
|
| T |
4503143 |
caattctttggtgaatttcttgttaaacttaatgactctgccactgctggtcttatccctccagttacttgcttagtttctgattgcaacatgccatttc |
4503242 |
T |
|
| Q |
392 |
cagtggatgccgctgaacaacgtgcactcccaatcgttctcttttccccggtcagtgcatgttgctcactcactacttctcacattcctaaattgtttca |
491 |
Q |
| |
|
|||| |||| |||||| ||| | |||||||||| |||||| ||||||| ||||||| || || | |||||| ||||||| ||||||||||||| |
|
|
| T |
4503243 |
cagtatatgctgctgaagaacatacactcccaattgttctcgtttccccatgtagtgcatcttacttctactctacttttcacattgctaaattgtttca |
4503342 |
T |
|
| Q |
492 |
gaatggtgtgctgccactcaaaggta |
517 |
Q |
| |
|
||| || |||| ||||||||||||| |
|
|
| T |
4503343 |
caatagtatgctaccactcaaaggta |
4503368 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 49 - 440
Target Start/End: Complemental strand, 4562186 - 4561792
Alignment:
| Q |
49 |
caaggccatatcaatgcattgttgaaactaggaaaactacttcatcttagaggttttcacataa-cctttgtcaacactgaatacaatcacaattgcttg |
147 |
Q |
| |
|
||||| ||||||||||||||||||||| ||| |||||| ||||| || ||||| |||||||||| ||||||| |||||||||||||||||||| | ||| |
|
|
| T |
4562186 |
caaggtcatatcaatgcattgttgaaaatagcaaaactgcttcacctaagaggctttcacataaacctttgttaacactgaatacaatcacaaacgtttg |
4562087 |
T |
|
| Q |
148 |
ctcaattcaagaggtcctaattctcttgatggtttcactgactttaactttgagaccattccaaatggttttacaacaatggaaactg---gtgatgttt |
244 |
Q |
| |
|
|| ||| |||||||| ||| | ||||||||||||||||||||||||||||||| || ||| ||||||| || ||| ||| || ||||| || |
|
|
| T |
4562086 |
ctaaat-caagaggtgaaaatgcctttgatggtttcactgactttaactttgagactataccagatggtttaactccaaaggatggtgatggtgatatta |
4561988 |
T |
|
| Q |
245 |
ttcaagacgtacacttattttttcaatcaatcatgatgaacttcattcaaccctttggtgaactccttacaagacttgatgcctctgccactaccggtct |
344 |
Q |
| |
|
||||||| |||||| || | |||||||||| | |||||| || ||||| |||||| ||| | | |||| | | |||||||||| | ||||| |
|
|
| T |
4561987 |
gtcaagacctacactctcttggtgaatcaatcataacgaactttcaccacttctttgatgaacttcttgctaaacttcaagactctgccactgctggtct |
4561888 |
T |
|
| Q |
345 |
tatccctccggttacttgcatagtttctgattgttacatgccatttacagtggatgccgctgaacaacgtgcactcccaatcgttctcttttcccc |
440 |
Q |
| |
|
|||||| || || |||||| ||||||||||||| ||||||||||||||||| | ||| |||||| ||| |||||||||| | ||||| |||||||| |
|
|
| T |
4561887 |
tatccccccagtcacttgcttagtttctgattgctacatgccatttacagtagctgctgctgaagaacatgcactcccagttgttcttttttcccc |
4561792 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 19 - 218
Target Start/End: Complemental strand, 4572520 - 4572321
Alignment:
| Q |
19 |
ccacatgctgtgttgattccatgtccatcccaaggccatatcaatgcattgttgaaactaggaaaactacttcatcttagaggttttcacataacctttg |
118 |
Q |
| |
|
|||||||||||||| || |||| |||| ||||||||||||||| |||||||| |||||| |||| | ||||| |||||||||||||||||||||| || |
|
|
| T |
4572520 |
ccacatgctgtgttaatcccatatccagttcaaggccatatcaatccattgttgcaactagcaaaatttcttcaccttagaggttttcacataacctatg |
4572421 |
T |
|
| Q |
119 |
tcaacactgaatacaatcacaattgcttgctcaattcaagaggtcctaattctcttgatggtttcactgactttaactttgagaccattccaaatggttt |
218 |
Q |
| |
|
| |||||||||||||||||||| | |||||||| |||||||||| ||| | ||||||||||||| | ||||||||||||| |||||| ||||||| |
|
|
| T |
4572420 |
taaacactgaatacaatcacaaacggttgctcaagtcaagaggtcaaaatgcctttgatggtttcaccaattttaactttgagagtattccagatggttt |
4572321 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 15 - 375
Target Start/End: Complemental strand, 4581572 - 4581209
Alignment:
| Q |
15 |
aaagccacatgctgtgttgattccatgtccatcccaaggccatatcaatgcattgttgaaactaggaaaactacttcatcttagaggttttcacataacc |
114 |
Q |
| |
|
|||||||||||| ||||||||||||| |||| ||||| ||||||| | |||| | | ||||| ||| || ||||| |||||||| |||||||||||| |
|
|
| T |
4581572 |
aaagccacatgcagtgttgattccatatccacttcaaggacatatcactccattaataacactagcaaagcttcttcaccttagaggctttcacataacc |
4581473 |
T |
|
| Q |
115 |
tttgtcaacactgaatacaatcacaattgcttgctcaattcaagaggtcctaattctcttgatggtttcactgactttaactttgagaccattccaaatg |
214 |
Q |
| |
|
||||||||||| |||||||||||||| |||||||||| ||||||||||| || | ||||||||||||| || |||| ||||||||| |||||| ||| |
|
|
| T |
4581472 |
tttgtcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaaagcgtttgatggtttcaccgattttacctttgagactattccagatg |
4581373 |
T |
|
| Q |
215 |
gttttacaacaatggaa---actggtgatgtttttcaagacgtacacttattttttcaatcaatcatgatgaacttcattcaaccctttggtgaactcct |
311 |
Q |
| |
|
|||| || | || ||| | |||||||| ||||||| || | | | | ||||||||| | ||||||| | ||||| ||| ||||||| || |
|
|
| T |
4581372 |
gtttaactccgatagaaggcgatagtgatgttaatcaagacatatatgctctatgtgaatcaatcagaaagaacttcctacaacctttttgtgaacttct |
4581273 |
T |
|
| Q |
312 |
tacaagacttgatgcctctgccactaccggtcttatccctccggttacttgcatagtttctgat |
375 |
Q |
| |
|
| | |||||| ||| |||||||||| | |||||| ||||||| ||||||||||||||||||||| |
|
|
| T |
4581272 |
tgctagacttaatgactctgccacttctggtcttgtccctccagttacttgcatagtttctgat |
4581209 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 4 - 231
Target Start/End: Complemental strand, 4594579 - 4594352
Alignment:
| Q |
4 |
tttgcaaagacaaagccacatgctgtgttgattccatgtccatcccaaggccatatcaatgcattgttgaaactaggaaaactacttcatcttagaggtt |
103 |
Q |
| |
|
|||||||| | ||| ||||||||||||||||||||| |||| ||||| ||||| ||| ||||||| ||||| | |||||| ||||| |||||||| | |
|
|
| T |
4594579 |
tttgcaaacagaaaaccacatgctgtgttgattccagctccacttcaaggacatataaatccattgttcaaacttgcaaaacttcttcaccttagaggat |
4594480 |
T |
|
| Q |
104 |
ttcacataacctttgtcaacactgaatacaatcacaattgcttgctcaattcaagaggtcctaattctcttgatggtttcactgactttaactttgagac |
203 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| || | |||||||| ||||||||||| ||| | | ||||||||| ||| |||| |||||| || |
|
|
| T |
4594479 |
ttcacataacctttgtcaacactgaatacaatcataaacgtttgctcaaatcaagaggtccaaatgccttagatggtttccctggttttagctttgaaac |
4594380 |
T |
|
| Q |
204 |
cattccaaatggttttacaacaatggaa |
231 |
Q |
| |
|
||| ||| ||||| | ||| |||||||| |
|
|
| T |
4594379 |
cataccagatggtctaacaccaatggaa |
4594352 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 22 - 218
Target Start/End: Complemental strand, 4587183 - 4586987
Alignment:
| Q |
22 |
catgctgtgttgattccatgtccatcccaaggccatatcaatgcattgttgaaactaggaaaactacttcatcttagaggttttcacataacctttgtca |
121 |
Q |
| |
|
||||||||||| || |||| |||| ||||||||||||||| ||||||||||||||| ||||| ||||| ||| |||| ||||||||||||||||| | |
|
|
| T |
4587183 |
catgctgtgttaatcccatctccagttcaaggccatatcaatccattgttgaaactagctaaacttcttcaccttcgaggatttcacataacctttgtaa |
4587084 |
T |
|
| Q |
122 |
acactgaatacaatcacaattgcttgctcaattcaagaggtcctaattctcttgatggtttcactgactttaactttgagaccattccaaatggttt |
218 |
Q |
| |
|
||||||||||||||||||| | ||||| || ||||||| ||| ||| | |||||| ||| ||||| |||| ||||||||| |||||| ||||||| |
|
|
| T |
4587083 |
acactgaatacaatcacaaacggttgcttaagtcaagagctccaaatgcctttgatgatttaactgattttagctttgagactattccagatggttt |
4586987 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 14 - 201
Target Start/End: Original strand, 4612287 - 4612474
Alignment:
| Q |
14 |
caaagccacatgctgtgttgattccatgtccatcccaaggccatatcaatgcattgttgaaactaggaaaactacttcatcttagaggttttcacataac |
113 |
Q |
| |
|
|||| |||||||| ||||| ||||||| |||| ||||||||||||||| |||| | ||||||| |||||| ||||| |||||||| ||||||||||| |
|
|
| T |
4612287 |
caaaaccacatgcagtgttaattccatatccagttcaaggccatatcaatccattaatcaaactagcaaaacttcttcaccttagaggctttcacataac |
4612386 |
T |
|
| Q |
114 |
ctttgtcaacactgaatacaatcacaattgcttgctcaattcaagaggtcctaattctcttgatggtttcactgactttaactttgag |
201 |
Q |
| |
|
|| |||||||| |||||||||||||| |||||||||| ||||||||||| ||| | ||| |||||||||||| |||| ||||||| |
|
|
| T |
4612387 |
attcgtcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaatgcctttgttggtttcactgattttacctttgag |
4612474 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 3 - 164
Target Start/End: Complemental strand, 4565599 - 4565438
Alignment:
| Q |
3 |
ttttgcaaagacaaagccacatgctgtgttgattccatgtccatcccaaggccatatcaatgcattgttgaaactaggaaaactacttcatcttagaggt |
102 |
Q |
| |
|
||||||||| | ||| ||||||||||||||||||||| ||||| ||||| ||||| ||| ||||||| ||||| | |||||| ||||| |||||||| |
|
|
| T |
4565599 |
ttttgcaaacagaaaaccacatgctgtgttgattccagctccatttcaaggacatataaatccattgttcaaacttgcaaaacttcttcaccttagagga |
4565500 |
T |
|
| Q |
103 |
tttcacataacctttgtcaacactgaatacaatcacaattgcttgctcaattcaagaggtcc |
164 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||| || | ||||| || ||||||||||| |
|
|
| T |
4565499 |
tttcatataacctttgtcaacactgaatacaatcataaacgattgctaaaatcaagaggtcc |
4565438 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 49 - 218
Target Start/End: Complemental strand, 4569594 - 4569429
Alignment:
| Q |
49 |
caaggccatatcaatgcattgttgaaactaggaaaactacttcatcttagaggttttcacataacctttgtcaacactgaatacaatcacaattgcttgc |
148 |
Q |
| |
|
||||||||||||||| |||| |||||||||| |||||| ||||| |||||||| ||||||||||||||||||||||| || |||||||| |||| |
|
|
| T |
4569594 |
caaggccatatcaatccattattgaaactagcaaaacttcttcaccttagaggctttcacataacctttgtcaacaccga----aatcacaaacatttgc |
4569499 |
T |
|
| Q |
149 |
tcaattcaagaggtcctaattctcttgatggtttcactgactttaactttgagaccattccaaatggttt |
218 |
Q |
| |
|
|||| ||||||||||| || | |||||||||||||||| |||| ||||||||| |||||| ||||||| |
|
|
| T |
4569498 |
tcaaatcaagaggtccaaaagcctttgatggtttcactgattttacctttgagactattccagatggttt |
4569429 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 88 - 218
Target Start/End: Complemental strand, 4599648 - 4599518
Alignment:
| Q |
88 |
cttcatcttagaggttttcacataacctttgtcaacactgaatacaatcacaattgcttgctcaattcaagaggtcctaattctcttgatggtttcactg |
187 |
Q |
| |
|
||||| |||||||| ||| |||||||||| || ||||| || ||||||||||| |||||||||| ||||||||||||||||||| | |||||||||||| |
|
|
| T |
4599648 |
cttcaccttagaggattttacataaccttcgtgaacaccgagtacaatcacaaacgcttgctcaaatcaagaggtcctaattctcgtaatggtttcactg |
4599549 |
T |
|
| Q |
188 |
actttaactttgagaccattccaaatggttt |
218 |
Q |
| |
|
| ||| ||| ||||| |||||| ||||||| |
|
|
| T |
4599548 |
atttttccttcgagactattccagatggttt |
4599518 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 4472678 - 4472612
Alignment:
| Q |
1 |
aattttgcaaagacaaagccacatgctgtgttgattccatgtccatcccaaggccatatcaatgcat |
67 |
Q |
| |
|
|||||||||| |||||| |||||||| |||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
4472678 |
aattttgcaatgacaaaaccacatgcagtgttgattccatgtccaccccaaggccatatcaatgcat |
4472612 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 18 - 164
Target Start/End: Original strand, 4255394 - 4255528
Alignment:
| Q |
18 |
gccacatgctgtgttgattccatgtccatcccaaggccatatcaatgcattgttgaaactaggaaaactacttcatcttagaggttttcacataaccttt |
117 |
Q |
| |
|
||||||||||||||||||||||| |||| ||||||||||||||| ||| || ||||||| |||| |||||||||||| ||| |||| |
|
|
| T |
4255394 |
gccacatgctgtgttgattccatatccagttcaaggccatatcaatctattattcaaactagcaaaattacttcatcttaaagg------------cttt |
4255481 |
T |
|
| Q |
118 |
gtcaacactgaatacaatcacaattgcttgctcaattcaagaggtcc |
164 |
Q |
| |
|
|||||||| |||||||||||||| |||||||| | ||||||||||| |
|
|
| T |
4255482 |
gtcaacaccgaatacaatcacaaacgcttgctcgaatcaagaggtcc |
4255528 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 4497815 - 4497899
Alignment:
| Q |
15 |
aaagccacatgctgtgttgattccatgtccatcccaaggccatatcaatgcattgttgaaactaggaaaactacttcatcttaga |
99 |
Q |
| |
|
|||||||||||| ||||| | ||||| |||| |||||||||||||| |||||||||||||||||||| ||||||| |||||| |
|
|
| T |
4497815 |
aaagccacatgcagtgttaactccatttccaatttaaggccatatcaatccattgttgaaactaggaaaattacttcaccttaga |
4497899 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 355 - 440
Target Start/End: Original strand, 4255552 - 4255637
Alignment:
| Q |
355 |
gttacttgcatagtttctgattgttacatgccatttacagtggatgccgctgaacaacgtgcactcccaatcgttctcttttcccc |
440 |
Q |
| |
|
||||||||| |||||||||||||||||||| ||||||| | | || |||||| | | |||||||||||| |||||| ||||||| |
|
|
| T |
4255552 |
gttacttgcttagtttctgattgttacatgtcatttaccatacaagctgctgaagagcatgcactcccaattgttctcctttcccc |
4255637 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 282 - 437
Target Start/End: Complemental strand, 4627438 - 4627283
Alignment:
| Q |
282 |
gaacttcattcaaccctttggtgaactccttacaagacttgatgcctctgccactaccggtcttatccctccggttacttgcatagtttctgattgttac |
381 |
Q |
| |
|
||||||| |||| |||||||||||||| ||| | | |||| ||| ||| |||||| | |||||| | | || ||||||||| ||||||| ||||||| |
|
|
| T |
4627438 |
gaacttccttcagccctttggtgaacttcttgctaaacttcatgactcagccactgctggtcttgttgcaccagttacttgcttagtttcagattgttta |
4627339 |
T |
|
| Q |
382 |
atgccatttacagtggatgccgctgaacaacgtgcactcccaatcgttctcttttc |
437 |
Q |
| |
|
||| ||||||| | | || |||||| ||| |||||||||||| | ||||||||| |
|
|
| T |
4627338 |
atgtcatttaccatacaagctgctgaagaacatgcactcccaattgctctcttttc |
4627283 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 4493459 - 4493401
Alignment:
| Q |
19 |
ccacatgctgtgttgattccatgtccatcccaaggccatatcaatgcattgttgaaact |
77 |
Q |
| |
|
|||||||| ||||||||||||| |||| | ||||| |||||||||||| || ||||||| |
|
|
| T |
4493459 |
ccacatgcagtgttgattccatttccagctcaaggtcatatcaatgcaatgctgaaact |
4493401 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 4298172 - 4298269
Alignment:
| Q |
119 |
tcaacactgaatacaatcacaattgcttgctcaattcaagaggtcctaattctcttgatggtttcactgactttaactttgagaccattccaaatggt |
216 |
Q |
| |
|
||||||| |||||||||||||| | ||||| | ||||| ||||| || || ||||||||||||| |||||| ||||||||| |||||| ||||| |
|
|
| T |
4298172 |
tcaacaccgaatacaatcacaaacacctgctcgaatcaaggggtccaaaagcttttgatggtttcaccaactttagctttgagactattccagatggt |
4298269 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 144; Significance: 2e-75; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 1 - 395
Target Start/End: Complemental strand, 24104667 - 24104270
Alignment:
| Q |
1 |
aattttgcaaagacaaagccacatgctgtgttgattccatgtccatcccaaggccatatcaatgcattgttgaaactaggaaaactacttcatcttagag |
100 |
Q |
| |
|
||||||| |||| ||||||| |||||||||||||||||| ||||| ||||| ||||||||||||||||| ||||||||||| || ||||| ||||||| |
|
|
| T |
24104667 |
aattttgtaaagccaaagccgcatgctgtgttgattccagctccatttcaaggtcatatcaatgcattgttcaaactaggaaagcttcttcaccttagag |
24104568 |
T |
|
| Q |
101 |
gttttcacataacctttgtcaacactgaatacaatcacaattgcttgctcaattcaagaggtcctaattctcttgatggtttcactgactttaactttga |
200 |
Q |
| |
|
| |||||||||||||| || ||||| |||||||||||||| |||||||| | ||||||| ||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
24104567 |
gctttcacataaccttcgtgaacaccgaatacaatcacaaacgcttgctcgaatcaagagatcctaattctcttgatggtttcaatgactttaactttga |
24104468 |
T |
|
| Q |
201 |
gaccattccaaatggttttacaacaatggaa---actggtgatgtttttcaagacgtacacttattttttcaatcaatcatgatgaacttcattcaaccc |
297 |
Q |
| |
|
|||||| ||| ||||| | || |||||||| | |||||||||| ||||||| || || || | ||||||||||||| ||||||| |||| ||| |
|
|
| T |
24104467 |
gaccataccagatggtctaactccaatggaaggcaatggtgatgttactcaagacatataccctcttgtgcaatcaatcatgacgaacttccttcagccc |
24104368 |
T |
|
| Q |
298 |
tttggtgaactccttacaagacttgatgcctctgccactaccggtcttatccctccggttacttgcatagtttctgattgttacatgccatttacagt |
395 |
Q |
| |
|
|||| |||||| ||||| |||||| || ||||||| | ||| |||| || || |||||||| ||||||| ||||||||||||||||||||||| |
|
|
| T |
24104367 |
tttgatgaacttcttactagacttcatcaatctgccaatgatggtgttattccaccaattacttgcttagtttcggattgttacatgccatttacagt |
24104270 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 113; Significance: 6e-57; HSPs: 5)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 4 - 216
Target Start/End: Complemental strand, 1283002 - 1282790
Alignment:
| Q |
4 |
tttgcaaagacaaagccacatgctgtgttgattccatgtccatcccaaggccatatcaatgcattgttgaaactaggaaaactacttcatcttagaggtt |
103 |
Q |
| |
|
|||||||| ||||| |||||||||||||||||||||| |||| | ||||||||||||||| ||||||| ||||||| |||||||||||| |||||||| | |
|
|
| T |
1283002 |
tttgcaaacacaaaaccacatgctgtgttgattccatatccagctcaaggccatatcaatccattgttcaaactagcaaaactacttcaccttagaggct |
1282903 |
T |
|
| Q |
104 |
ttcacataacctttgtcaacactgaatacaatcacaattgcttgctcaattcaagaggtcctaattctcttgatggtttcactgactttaactttgagac |
203 |
Q |
| |
|
|| ||||||||||||| || ||||||||||||||||| |||||||||| ||||||||||| ||| | || |||||||||||||| |||| |||||| || |
|
|
| T |
1282902 |
tttacataacctttgttaatactgaatacaatcacaaacgcttgctcaaatcaagaggtccaaatgccctagatggtttcactgattttagctttgaaac |
1282803 |
T |
|
| Q |
204 |
cattccaaatggt |
216 |
Q |
| |
|
||| ||| ||||| |
|
|
| T |
1282802 |
catcccagatggt |
1282790 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 99 - 140
Target Start/End: Complemental strand, 35776320 - 35776279
Alignment:
| Q |
99 |
aggttttcacataacctttgtcaacactgaatacaatcacaa |
140 |
Q |
| |
|
||||||||||||||||||||| |||||||||| ||| ||||| |
|
|
| T |
35776320 |
aggttttcacataacctttgtgaacactgaattcaaccacaa |
35776279 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 100 - 140
Target Start/End: Complemental strand, 35842126 - 35842086
Alignment:
| Q |
100 |
ggttttcacataacctttgtcaacactgaatacaatcacaa |
140 |
Q |
| |
|
|||||||||||||||||||| |||||||||| ||| ||||| |
|
|
| T |
35842126 |
ggttttcacataacctttgtgaacactgaattcaaccacaa |
35842086 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 100 - 140
Target Start/End: Complemental strand, 35854634 - 35854594
Alignment:
| Q |
100 |
ggttttcacataacctttgtcaacactgaatacaatcacaa |
140 |
Q |
| |
|
|||||||||||||||||||| |||||||||| ||| ||||| |
|
|
| T |
35854634 |
ggttttcacataacctttgtgaacactgaattcaaccacaa |
35854594 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 100 - 140
Target Start/End: Complemental strand, 35869243 - 35869203
Alignment:
| Q |
100 |
ggttttcacataacctttgtcaacactgaatacaatcacaa |
140 |
Q |
| |
|
|||||||||||||||||||| |||||||||| ||| ||||| |
|
|
| T |
35869243 |
ggttttcacataacctttgtgaacactgaattcaaccacaa |
35869203 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0475 (Bit Score: 104; Significance: 1e-51; HSPs: 2)
Name: scaffold0475
Description:
Target: scaffold0475; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 3 - 218
Target Start/End: Complemental strand, 2394 - 2179
Alignment:
| Q |
3 |
ttttgcaaagacaaagccacatgctgtgttgattccatgtccatcccaaggccatatcaatgcattgttgaaactaggaaaactacttcatcttagaggt |
102 |
Q |
| |
|
||||||||| | ||| |||||||||||||||||||||| |||| ||||||||||||||| |||| || ||||||| ||| || ||||| |||||||| |
|
|
| T |
2394 |
ttttgcaaacaaaaaaccacatgctgtgttgattccatatccagttcaaggccatatcaatccattattcaaactagcaaagcttcttcaccttagaggc |
2295 |
T |
|
| Q |
103 |
tttcacataacctttgtcaacactgaatacaatcacaattgcttgctcaattcaagaggtcctaattctcttgatggtttcactgactttaactttgaga |
202 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| || |||||||||| ||||||||||||||| |||||||||||||| |||| ||| ||| |||| |
|
|
| T |
2294 |
tttcacataacctttgtcaacactgaatacaatcataaacgcttgctcaaatcaagaggtcctaatgctcttgatggtttcgctgatttttgcttcgaga |
2195 |
T |
|
| Q |
203 |
ccattccaaatggttt |
218 |
Q |
| |
|
| ||||| ||||||| |
|
|
| T |
2194 |
ctattcccgatggttt |
2179 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0475; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 340 - 390
Target Start/End: Complemental strand, 2051 - 2001
Alignment:
| Q |
340 |
ggtcttatccctccggttacttgcatagtttctgattgttacatgccattt |
390 |
Q |
| |
|
|||||||||||||| || ||| || |||||||||||||||||||| ||||| |
|
|
| T |
2051 |
ggtcttatccctccagtaactagcttagtttctgattgttacatgtcattt |
2001 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0288 (Bit Score: 99; Significance: 1e-48; HSPs: 2)
Name: scaffold0288
Description:
Target: scaffold0288; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 4 - 218
Target Start/End: Original strand, 2010 - 2224
Alignment:
| Q |
4 |
tttgcaaagacaaagccacatgctgtgttgattccatgtccatcccaaggccatatcaatgcattgttgaaactaggaaaactacttcatcttagaggtt |
103 |
Q |
| |
|
|||||||| | ||| ||||||| |||| ||||||||| |||| ||||||||||||||| ||||||| ||||||| ||| || ||||| |||||||| | |
|
|
| T |
2010 |
tttgcaaacagaaaaccacatgttgtgatgattccatatccagttcaaggccatatcaatccattgttcaaactagcaaagcttcttcaccttagaggct |
2109 |
T |
|
| Q |
104 |
ttcacataacctttgtcaacactgaatacaatcacaattgcttgctcaattcaagaggtcctaattctcttgatggtttcactgactttaactttgagac |
203 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| || |||||||||| ||||||||||||||| |||||||||||||| |||| ||| ||| ||||| |
|
|
| T |
2110 |
ttcacataacctttgtcaacactgaatacaatcataaacgcttgctcaaatcaagaggtcctaatgctcttgatggtttcgctgatttttgcttcgagac |
2209 |
T |
|
| Q |
204 |
cattccaaatggttt |
218 |
Q |
| |
|
||||| ||||||| |
|
|
| T |
2210 |
tattcccgatggttt |
2224 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0288; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 304 - 392
Target Start/End: Original strand, 2316 - 2404
Alignment:
| Q |
304 |
gaactccttacaagacttgatgcctctgccactaccggtcttatccctccggttacttgcatagtttctgattgttacatgccatttac |
392 |
Q |
| |
|
||||| ||| | |||||||| | ||||||| | | |||||||||||||| || ||| || |||||||||||||||||||| ||||||| |
|
|
| T |
2316 |
gaacttcttgctagacttgacgagtctgccaattctggtcttatccctccagtaactagcttagtttctgattgttacatgtcatttac |
2404 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 93; Significance: 5e-45; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 15 - 203
Target Start/End: Complemental strand, 3088303 - 3088115
Alignment:
| Q |
15 |
aaagccacatgctgtgttgattccatgtccatcccaaggccatatcaatgcattgttgaaactaggaaaactacttcatcttagaggttttcacataacc |
114 |
Q |
| |
|
|||||||||||||||||||||||||| |||| ||||| ||||| ||| ||||||| ||||||| |||||| ||||| |||| ||| |||||||||||| |
|
|
| T |
3088303 |
aaagccacatgctgtgttgattccatatccacttcaaggtcatataaatccattgttaaaactagcaaaacttcttcaccttaaaggctttcacataacc |
3088204 |
T |
|
| Q |
115 |
tttgtcaacactgaatacaatcacaattgcttgctcaattcaagaggtcctaattctcttgatggtttcactgactttaactttgagac |
203 |
Q |
| |
|
|||||||| || |||||||||||||| | ||||| || ||||||||| ||||||||||||||||||||||||| ||| ||||||||| |
|
|
| T |
3088203 |
tttgtcaataccgaatacaatcacaaccgtttgcttaaatcaagaggttctaattctcttgatggtttcactgattttgtctttgagac |
3088115 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0199 (Bit Score: 77; Significance: 2e-35; HSPs: 1)
Name: scaffold0199
Description:
Target: scaffold0199; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 20 - 216
Target Start/End: Complemental strand, 1311 - 1115
Alignment:
| Q |
20 |
cacatgctgtgttgattccatgtccatcccaaggccatatcaatgcattgttgaaactaggaaaactacttcatcttagaggttttcacataacctttgt |
119 |
Q |
| |
|
||||||||||||| ||||||| |||| | ||||||||||||||| ||||||| ||||||| |||||| |||| |||||||| | ||| |||||| ||| |
|
|
| T |
1311 |
cacatgctgtgttcattccatatccagctcaaggccatatcaatccattgttcaaactagcaaaacttattcaccttagaggctctcatgtaacctatgt |
1212 |
T |
|
| Q |
120 |
caacactgaatacaatcacaattgcttgctcaattcaagaggtcctaattctcttgatggtttcactgactttaactttgagaccattccaaatggt |
216 |
Q |
| |
|
||||||||||||||||||||| | |||||||| ||||||||||| | | | | |||||||||||||| |||| |||||| ||||| ||| ||||| |
|
|
| T |
1211 |
caacactgaatacaatcacaaacgtttgctcaaatcaagaggtccaactgccttggatggtttcactgattttagctttgaaaccatcccagatggt |
1115 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 77; Significance: 2e-35; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 20 - 216
Target Start/End: Complemental strand, 1676074 - 1675878
Alignment:
| Q |
20 |
cacatgctgtgttgattccatgtccatcccaaggccatatcaatgcattgttgaaactaggaaaactacttcatcttagaggttttcacataacctttgt |
119 |
Q |
| |
|
||||||||||||| ||||||| |||| | ||||||||||||||| ||||||| ||||||| |||||| |||| |||||||| | ||| |||||| ||| |
|
|
| T |
1676074 |
cacatgctgtgttcattccatatccagctcaaggccatatcaatccattgttcaaactagcaaaacttattcaccttagaggctctcatgtaacctatgt |
1675975 |
T |
|
| Q |
120 |
caacactgaatacaatcacaattgcttgctcaattcaagaggtcctaattctcttgatggtttcactgactttaactttgagaccattccaaatggt |
216 |
Q |
| |
|
||||||||||||||||||||| | |||||||| ||||||||||| | | | | |||||||||||||| |||| |||||| ||||| ||| ||||| |
|
|
| T |
1675974 |
caacactgaatacaatcacaaacgtttgctcaaatcaagaggtccaactgccttggatggtttcactgattttagctttgaaaccatcccagatggt |
1675878 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 20862366 - 20862582
Alignment:
| Q |
1 |
aattttgcaaagacaaagccacatgctgtgttgattccatgtccatcccaaggccatatcaatgcattgttgaaactaggaaaactacttcatcttagag |
100 |
Q |
| |
|
|||||||| ||| ||| |||||||| ||||| | ||||| |||| ||||| ||||||||| || |||| ||||||| |||||||||||| ||||||| |
|
|
| T |
20862366 |
aattttgctgagaaaaaaccacatgcagtgttaactccatatccacttcaaggtcatatcaatccaatgttaaaactagcaaaactacttcaccttagag |
20862465 |
T |
|
| Q |
101 |
gttttcacataacctttgtcaacactgaatacaatcacaattgcttgctcaattcaagaggtcctaattctc-ttgatggtttcactgactttaactttg |
199 |
Q |
| |
|
| ||| ||||||| |||||||| ||||||||||||||||| ||||||| || |||| ||||| ||| | | |||||||||||||||||||| ||||| |
|
|
| T |
20862466 |
gcttttacataacatttgtcaatactgaatacaatcacaaacgcttgcttaagtcaatgggtcc-aataccctttgatggtttcactgactttcgctttg |
20862564 |
T |
|
| Q |
200 |
agaccattccaaatggtt |
217 |
Q |
| |
|
||||| ||||| |||||| |
|
|
| T |
20862565 |
agaccgttccagatggtt |
20862582 |
T |
|
Back To:
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Target: scaffold0477 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0477
Description:
Target: scaffold0477; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 318 - 454
Target Start/End: Original strand, 3398 - 3534
Alignment:
| Q |
318 |
acttgatgcctctgccactaccggtcttatccctccggttacttgcatagtttctgattgttacatgccatttacagtggatgccgctgaacaacgtgca |
417 |
Q |
| |
|
|||| ||| |||||||||| | |||||| | || | |||||||||||||| |||||||||||||||||||||| | | || |||||| ||| |||| |
|
|
| T |
3398 |
acttcatgactctgccactgctggtcttgttccacaagttacttgcatagtcgctgattgttacatgccatttaccatacaagctgctgaagaacatgca |
3497 |
T |
|
| Q |
418 |
ctcccaatcgttctcttttccccggtcagtgcatgtt |
454 |
Q |
| |
|
|||||||| |||||||||||| | | ||||||||||| |
|
|
| T |
3498 |
ctcccaattgttctcttttccaccggcagtgcatgtt |
3534 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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