View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20692_low_4 (Length: 541)

Name: NF20692_low_4
Description: NF20692
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20692_low_4
NF20692_low_4
[»] chr3 (45 HSPs)
chr3 (184-525)||(596382-596719)
chr3 (74-192)||(600684-600804)
chr3 (12-151)||(53190759-53190903)
chr3 (12-152)||(27899081-27899226)
chr3 (9-152)||(21348722-21348870)
chr3 (9-151)||(30599915-30600062)
chr3 (9-149)||(43765139-43765284)
chr3 (19-154)||(54898434-54898574)
chr3 (9-154)||(51684607-51684757)
chr3 (12-151)||(2226152-2226296)
chr3 (12-137)||(35905712-35905842)
chr3 (12-151)||(46112487-46112631)
chr3 (9-151)||(17515310-17515457)
chr3 (9-151)||(23293167-23293314)
chr3 (12-151)||(41977750-41977894)
chr3 (9-98)||(42279562-42279654)
chr3 (9-99)||(46197774-46197867)
chr3 (9-103)||(48830803-48830900)
chr3 (9-151)||(3152215-3152362)
chr3 (65-151)||(23291570-23291658)
chr3 (12-148)||(2377032-2377173)
chr3 (74-151)||(48829356-48829435)
chr3 (65-157)||(53094274-53094368)
chr3 (74-152)||(46114115-46114196)
chr3 (65-151)||(611223-611311)
chr3 (65-151)||(38191895-38191983)
chr3 (65-151)||(38193511-38193599)
chr3 (65-151)||(41979353-41979441)
chr3 (65-151)||(46308807-46308895)
chr3 (114-154)||(27897148-27897188)
chr3 (74-151)||(51686404-51686483)
chr3 (65-126)||(54412548-54412611)
chr3 (12-62)||(7884873-7884924)
chr3 (65-153)||(46609147-46609237)
chr3 (105-151)||(7884942-7884988)
chr3 (77-152)||(30598336-30598413)
chr3 (65-148)||(42282474-42282559)
chr3 (77-152)||(44267980-44268057)
chr3 (9-62)||(44276193-44276247)
chr3 (9-152)||(44794207-44794354)
chr3 (65-151)||(3150252-3150340)
chr3 (65-151)||(44795891-44795979)
chr3 (65-151)||(54900075-54900163)
chr3 (12-59)||(600805-600853)
chr3 (65-150)||(2378984-2379071)
[»] chr8 (26 HSPs)
chr8 (12-153)||(8609787-8609933)
chr8 (9-151)||(13282478-13282625)
chr8 (12-152)||(38547227-38547372)
chr8 (9-151)||(41042581-41042728)
chr8 (9-153)||(26242311-26242460)
chr8 (12-151)||(13108336-13108480)
chr8 (9-99)||(41825641-41825734)
chr8 (65-151)||(42943427-42943515)
chr8 (9-148)||(42941777-42941921)
chr8 (65-154)||(5038063-5038153)
chr8 (9-96)||(13486096-13486186)
chr8 (9-99)||(7745109-7745202)
chr8 (9-99)||(9673162-9673255)
chr8 (9-99)||(22272390-22272483)
chr8 (43-150)||(5036446-5036557)
chr8 (65-151)||(22273892-22273980)
chr8 (74-151)||(34681076-34681155)
chr8 (74-151)||(26238726-26238805)
chr8 (49-151)||(27691154-27691260)
chr8 (65-154)||(13106801-13106892)
chr8 (65-161)||(38548832-38548930)
chr8 (65-152)||(33762714-33762803)
chr8 (9-99)||(40339677-40339770)
chr8 (65-151)||(601705-601793)
chr8 (65-151)||(27692838-27692926)
chr8 (65-101)||(9672029-9672065)
[»] chr1 (26 HSPs)
chr1 (9-155)||(27087279-27087430)
chr1 (12-153)||(31238475-31238621)
chr1 (12-153)||(4855946-4856092)
chr1 (12-153)||(25278348-25278494)
chr1 (12-152)||(6818658-6818803)
chr1 (12-151)||(34778118-34778262)
chr1 (9-151)||(2869579-2869726)
chr1 (9-154)||(51896129-51896279)
chr1 (9-99)||(15104495-15104588)
chr1 (12-151)||(37344342-37344486)
chr1 (65-154)||(31236816-31236907)
chr1 (9-152)||(3013447-3013601)
chr1 (13-158)||(50556078-50556228)
chr1 (65-148)||(3011858-3011943)
chr1 (65-152)||(25278989-25279078)
chr1 (77-152)||(37088149-37088226)
chr1 (9-152)||(46583533-46583681)
chr1 (74-153)||(25278852-25278933)
chr1 (65-154)||(25276739-25276830)
chr1 (65-150)||(50554164-50554251)
chr1 (65-148)||(51894570-51894655)
chr1 (65-154)||(26223584-26223675)
chr1 (74-151)||(52641888-52641967)
chr1 (65-151)||(34776569-34776657)
chr1 (65-151)||(37345963-37346051)
chr1 (65-151)||(46582010-46582098)
[»] chr5 (20 HSPs)
chr5 (12-153)||(17574316-17574462)
chr5 (12-151)||(7267843-7267987)
chr5 (9-151)||(36057590-36057737)
chr5 (9-151)||(34327635-34327782)
chr5 (65-153)||(12738737-12738827)
chr5 (65-153)||(12801560-12801650)
chr5 (12-151)||(2179787-2179931)
chr5 (12-97)||(30468260-30468348)
chr5 (13-157)||(8539669-8539818)
chr5 (9-99)||(18624985-18625078)
chr5 (65-151)||(30463900-30463988)
chr5 (65-151)||(8541272-8541360)
chr5 (65-151)||(2852886-2852974)
chr5 (65-153)||(28813766-28813858)
chr5 (65-151)||(21842993-21843081)
chr5 (49-152)||(24541230-24541337)
chr5 (65-130)||(43492134-43492201)
chr5 (65-152)||(7269447-7269536)
chr5 (42-97)||(35395389-35395446)
chr5 (77-151)||(34328840-34328916)
[»] chr7 (28 HSPs)
chr7 (12-153)||(34776895-34777041)
chr7 (12-151)||(39859209-39859353)
chr7 (12-126)||(13168145-13168267)
chr7 (9-151)||(37115503-37115650)
chr7 (12-151)||(6602335-6602479)
chr7 (9-148)||(24228386-24228530)
chr7 (9-152)||(47386186-47386334)
chr7 (9-151)||(30940402-30940549)
chr7 (9-151)||(38474120-38474267)
chr7 (12-126)||(45359361-45359480)
chr7 (65-152)||(13169684-13169773)
chr7 (65-158)||(35403620-35403715)
chr7 (65-153)||(6605398-6605488)
chr7 (9-153)||(27666042-27666191)
chr7 (65-153)||(39857643-39857733)
chr7 (65-151)||(34774998-34775086)
chr7 (65-151)||(37113941-37114029)
chr7 (21-97)||(37796170-37796249)
chr7 (9-97)||(48852324-48852415)
chr7 (77-150)||(24226582-24226657)
chr7 (50-151)||(56330-56435)
chr7 (65-153)||(22155848-22155938)
chr7 (65-153)||(22211763-22211853)
chr7 (104-151)||(23906309-23906356)
chr7 (9-99)||(35693347-35693442)
chr7 (65-151)||(47384294-47384382)
chr7 (104-148)||(13018036-13018080)
chr7 (49-151)||(29996532-29996638)
[»] chr2 (20 HSPs)
chr2 (9-152)||(39664745-39664893)
chr2 (11-153)||(44709744-44709891)
chr2 (12-151)||(19908246-19908391)
chr2 (12-152)||(16763075-16763220)
chr2 (9-157)||(17696200-17696353)
chr2 (9-153)||(40560221-40560370)
chr2 (9-152)||(2766933-2767081)
chr2 (9-157)||(14389081-14389234)
chr2 (9-151)||(6797507-6797654)
chr2 (9-152)||(39455168-39455316)
chr2 (9-147)||(42519202-42519346)
chr2 (12-99)||(16377197-16377287)
chr2 (74-151)||(19581414-19581493)
chr2 (77-151)||(34400314-34400390)
chr2 (65-154)||(16376733-16376824)
chr2 (74-148)||(19906685-19906761)
chr2 (65-151)||(39456781-39456869)
chr2 (65-153)||(16764612-16764702)
chr2 (65-151)||(14387349-14387437)
chr2 (65-151)||(39663154-39663242)
[»] scaffold0564 (1 HSPs)
scaffold0564 (12-149)||(8264-8404)
[»] chr4 (23 HSPs)
chr4 (12-151)||(35404425-35404569)
chr4 (9-150)||(49523125-49523271)
chr4 (9-148)||(41761723-41761867)
chr4 (9-152)||(41781538-41781686)
chr4 (12-151)||(51011926-51012070)
chr4 (9-151)||(48813787-48813934)
chr4 (65-152)||(20493826-20493915)
chr4 (9-101)||(42980687-42980782)
chr4 (65-153)||(35401747-35401837)
chr4 (9-99)||(48646724-48646817)
chr4 (9-126)||(2693230-2693351)
chr4 (65-152)||(49524734-49524823)
chr4 (12-126)||(52868129-52868248)
chr4 (65-126)||(39345589-39345652)
chr4 (74-151)||(48645255-48645334)
chr4 (65-152)||(43507166-43507255)
chr4 (65-151)||(319273-319361)
chr4 (65-151)||(4173741-4173829)
chr4 (65-151)||(33266011-33266099)
chr4 (65-151)||(43508654-43508742)
chr4 (65-151)||(43519424-43519512)
chr4 (82-152)||(320918-320990)
chr4 (65-151)||(33264382-33264470)
[»] chr6 (16 HSPs)
chr6 (9-99)||(9398714-9398807)
chr6 (9-126)||(20523391-20523513)
chr6 (12-152)||(32439071-32439216)
chr6 (9-99)||(7372935-7373028)
chr6 (12-154)||(32516874-32517021)
chr6 (9-99)||(10568453-10568546)
chr6 (9-152)||(13613559-13613707)
chr6 (74-151)||(10569929-10570008)
chr6 (12-150)||(11355223-11355366)
chr6 (9-97)||(6899541-6899632)
chr6 (9-62)||(7049850-7049904)
chr6 (65-151)||(32518498-32518586)
chr6 (84-154)||(7371172-7371244)
chr6 (65-151)||(9400036-9400124)
chr6 (9-97)||(14338452-14338543)
chr6 (65-97)||(33267117-33267149)
[»] scaffold1454 (1 HSPs)
scaffold1454 (12-148)||(1266-1407)
[»] scaffold0058 (3 HSPs)
scaffold0058 (9-153)||(3292-3441)
scaffold0058 (9-153)||(4464-4613)
scaffold0058 (65-153)||(14344-14434)
[»] scaffold0002 (1 HSPs)
scaffold0002 (77-144)||(436272-436341)


Alignment Details
Target: chr3 (Bit Score: 297; Significance: 1e-167; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 297; E-Value: 1e-167
Query Start/End: Original strand, 184 - 525
Target Start/End: Complemental strand, 596719 - 596382
Alignment:
Q  184 ttttgtttttaatcggtgaaattgtcgaaatattaaggttaggtgagaagtgagagtatgcttattcattcctggccattccaatttaaaggattaacga 283  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  596719 ttttctttttaatcggtgaaattgtctaaatattaaggttaggtgagaagtgagagtatgcttattcattcctggccattccaatttaaaggattaacga 596620  T
Q  284 ttgtgagtgtctgtctgaattggggaattatgttaaagtaatgaaaaacaacagaaaattagagatatagaatttattcattcaaccaccaatcaaatta 383  Q
     ||||||||||||    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  596619 gtgtgagtgtctg----aattggggaattatgttaaagtaatgaaaaacaacagaaaattagagatatagaattcattcattcaaccaccaatcaaatta 596524  T
Q  384 caacaatgttgtatagatcaacaagagattctttaatatcaagaaactctaaatcaaaatcaatctcaataagaagattatgttcacggaaggtgatgat 483  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  596523 caacaatgttgtatagatcaacaagagattctttaagatcaagaaactctaaatcaaaatcaatctcaataagaagattatgttcacgaaaggtgatgat 596424  T
Q  484 tttgtgtcttatcattgtagctatattgccaccaatcttctt 525  Q
    ||||||||| ||||||||||||||||||||||||||||||||    
T  596423 tttgtgtctcatcattgtagctatattgccaccaatcttctt 596382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 74 - 192
Target Start/End: Complemental strand, 600804 - 600684
Alignment:
Q  74 actaaatagatatttcgcaaaattcatgaa--aatttggccgattttttaaaatttaagaatgaatatgaggtattagtcaaatttatatgtatcaaaaa 171  Q
    ||||||||||||||| | ||||||||||||  ||||||| ||||||||||||||| ||| |||||| |||||||||||||||||||||||||| ||||||    
T  600804 actaaatagatattttgtaaaattcatgaacaaatttggtcgattttttaaaattcaaggatgaatttgaggtattagtcaaatttatatgtaccaaaaa 600705  T
Q  172 catatttaaccattttgtttt 192  Q
    |||||||||||||||||||||    
T  600704 catatttaaccattttgtttt 600684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 12 - 151
Target Start/End: Original strand, 53190759 - 53190903
Alignment:
Q  12 tcatcaccactaacggggcttttggacggtgg-accattttgatggacgtctataa--ttcaggaactaaatagatatttcgcaaaattcatgaa--aat 106  Q
    |||||||||||||||| |||||||||||| || ||||||||||||||||||| |||  |||||| |||||||||||||||||||||||||| | |  |||    
T  53190759 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaat 53190858  T
Q  107 ttggccgattttttaaaatttaagaatgaatatgaggtattagtc 151  Q
    |||||||||||||||||||| ||| | |||| |||||||||||||    
T  53190859 ttggccgattttttaaaattcaaggacgaatttgaggtattagtc 53190903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 12 - 152
Target Start/End: Original strand, 27899081 - 27899226
Alignment:
Q  12 tcatcaccactaacggggcttttggacggtgg-accattttgatggacgtctataa--ttcaggaactaaatagatatttcgcaaaattcatgaa--aat 106  Q
    |||||||||||||||| |||||||||||| || |||||||| |||||||||| |||  |||||| |||||||||||||||||||||||||| | |  |||    
T  27899081 tcatcaccactaacggagcttttggacggagggaccatttttatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcaaggacgaat 27899180  T
Q  107 ttggccgattttttaaaatttaagaatgaatatgaggtattagtca 152  Q
    |||||||||||||||||||| ||| | |||| ||||||||||||||    
T  27899181 ttggccgattttttaaaattcaaggacgaatttgaggtattagtca 27899226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 9 - 152
Target Start/End: Complemental strand, 21348870 - 21348722
Alignment:
Q  9 acatcatcaccactaacggggcttttggacggtgg-accattttgatggacgtctataa--ttcaggaactaaatagatatttcgcaaaattcatgaa-- 103  Q
    |||| |||||||||||| | |||||||||||| || ||||||||||||||||||| |||  |||||| |||||||||||||||||||||||||| | |      
T  21348870 acattatcaccactaacagagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcaaggacg 21348771  T
Q  104 aatttggccgattttttaaaatttaagaatgaatatgaggtattagtca 152  Q
    ||||||||||||||||||||||| ||| |  ||| ||||||||||||||    
T  21348770 aatttggccgattttttaaaattcaaggacaaatttgaggtattagtca 21348722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 9 - 151
Target Start/End: Original strand, 30599915 - 30600062
Alignment:
Q  9 acatcatcaccactaacggggcttttggacggtgg-accattttgatggacgtctataa--ttcaggaactaaatagatatttcgcaaaattcatg--aa 103  Q
    ||||||||||||||||| | |||||||||||| || ||||||||||| ||||||| |||  |||||| |||||||||||||||||||||||||| |   |    
T  30599915 acatcatcaccactaacagagcttttggacggagggaccattttgatcgacgtctctaaaattcagggactaaatagatatttcgcaaaattcagggaca 30600014  T
Q  104 aatttggccgattttttaaaatttaagaatgaatatgaggtattagtc 151  Q
    |||||||||||||| | |||||||||| | |||| |||||||||||||    
T  30600015 aatttggccgatttgtaaaaatttaaggacgaatttgaggtattagtc 30600062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 43765284 - 43765139
Alignment:
Q  9 acatcatcaccactaacggggcttttggacggtgg-accattttgatggacgtctataa--ttcaggaactaaatagatatttcgcaaaattcatgaa-- 103  Q
    ||||||||||||||||||| ||||||||| || || ||||||||||||||||||| |||  ||||| ||||||||||||||||||||||||||  |||      
T  43765284 acatcatcaccactaacggagcttttggatggagggaccattttgatggacgtctgtaaaattcagaaactaaatagatatttcgcaaaattccggaacg 43765185  T
Q  104 aatttggccgattttttaaaatttaagaatgaatatgaggtattag 149  Q
    |||||| ||||||||| |||||| ||| | |||| |||||||||||    
T  43765184 aatttgaccgatttttgaaaattcaaggacgaatttgaggtattag 43765139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 19 - 154
Target Start/End: Complemental strand, 54898574 - 54898434
Alignment:
Q  19 cactaacggggcttttggacggtg-gaccattttgatggacgtctataa--ttcaggaactaaatagatatttcgcaaaattcatgaa--aatttggccg 113  Q
    ||||||||| |||||||||||| | ||||||||||||| |||||| |||  |||||| |||||||||||||||||||||||||| | |  |||||| |||    
T  54898574 cactaacggagcttttggacggagagaccattttgatgaacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatttgaccg 54898475  T
Q  114 attttttaaaatttaagaatgaatatgaggtattagtcaaa 154  Q
    ||||||||||||| ||| | |||| ||||||||||||||||    
T  54898474 attttttaaaattcaaggacgaatttgaggtattagtcaaa 54898434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 9 - 154
Target Start/End: Complemental strand, 51684757 - 51684607
Alignment:
Q  9 acatcatcaccactaacggggcttttggacgg-tggaccattttgatggacgtc--tataattcaggaactaaatagatatttcgcaaaattcatgaa-- 103  Q
    ||||||||||||||||||| ||||||||||||  ||||||||||||||||||||  || |||||| | ||||||||||||||| |||||||||| | |      
T  51684757 acatcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcaaggactaaatagatattttgcaaaattcagggatg 51684658  T
Q  104 aatttggccgattttttaaaatttaagaatgaatatgaggtattagtcaaa 154  Q
    |||||||| ||||||| |||||| ||| | |||| |||| |||||||||||    
T  51684657 aatttggctgatttttgaaaattcaaggacgaatttgagatattagtcaaa 51684607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 12 - 151
Target Start/End: Original strand, 2226152 - 2226296
Alignment:
Q  12 tcatcaccactaacggggcttttggacggtgg-accattttgatggacgtctataa--ttcaggaactaaatagatatttcgcaaaattcatgaa--aat 106  Q
    |||||||||||||| | | |||||||||| || | |||||||||| |||||| |||  |||||| |||||||||||||||||||||||||| | |  |||    
T  2226152 tcatcaccactaacagagtttttggacggagggaacattttgatgaacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaat 2226251  T
Q  107 ttggccgattttttaaaatttaagaatgaatatgaggtattagtc 151  Q
    |||||||||||||||||||| ||| | |||| |||||||||||||    
T  2226252 ttggccgattttttaaaattcaaggacgaatttgaggtattagtc 2226296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 12 - 137
Target Start/End: Original strand, 35905712 - 35905842
Alignment:
Q  12 tcatcaccactaacggggcttttggacggtgg-accattttgatggacgtctataa--ttcaggaactaaatagatatttcgcaaaattcatgaa--aat 106  Q
    |||||||||||| ||| |||||||||||| || |||||||||||| |||||| |||  |||||| |||||||||||||||||||||||||| | |  |||    
T  35905712 tcatcaccactaccggagcttttggacggagggaccattttgatgaacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaat 35905811  T
Q  107 ttggccgattttttaaaatttaagaatgaat 137  Q
    ||| |||||||||||||||| ||| ||||||    
T  35905812 ttgaccgattttttaaaattcaaggatgaat 35905842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 12 - 151
Target Start/End: Complemental strand, 46112631 - 46112487
Alignment:
Q  12 tcatcaccactaacggggcttttggacggtgg-accattttgatggacgtctataa--ttcaggaactaaatagatatttcgcaaaattcatgaa--aat 106  Q
    ||||||||||||||   ||||||| |||| || ||||||||||||||||||| |||  |||| | ||||||||||||||| ||||||||||  ||  |||    
T  46112631 tcatcaccactaacatagcttttgaacggagggaccattttgatggacgtctgtaaaattcatggactaaatagatattttgcaaaattcaataacgaat 46112532  T
Q  107 ttggccgattttttaaaatttaagaatgaatatgaggtattagtc 151  Q
    |||||||||||||||||||| ||| | |||| |||||||||||||    
T  46112531 ttggccgattttttaaaattcaaggacgaatttgaggtattagtc 46112487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 9 - 151
Target Start/End: Complemental strand, 17515457 - 17515310
Alignment:
Q  9 acatcatcaccactaacggggcttttggacggtgg-accattttgatggacgtctataa--ttcaggaactaaatagatatttcgcaaaattcatgaa-- 103  Q
    ||||||||||||||||||| | |||||||| | || ||||||||||||||||| | |||  |||||| ||||||||||||||||||||||||||   |      
T  17515457 acatcatcaccactaacggtgattttggacagagggaccattttgatggacgtttgtaaaattcagggactaaatagatatttcgcaaaattcagcgatg 17515358  T
Q  104 aatttggccgattttttaaaatttaagaatgaatatgaggtattagtc 151  Q
    ||||||||| |||||| |||||| ||| | |||| |||||||||||||    
T  17515357 aatttggccaatttttaaaaattcaaggaagaatttgaggtattagtc 17515310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 9 - 151
Target Start/End: Original strand, 23293167 - 23293314
Alignment:
Q  9 acatcatcaccactaacggggcttttggacgg-tggaccattttgatggacg--tctataattcaggaactaaatagatatttcgcaaaattca--tgaa 103  Q
    ||||||||||||||||||| ||||||||||||  |||| |||||||||||||  | || |||||| | ||||||||||||||||||||||||||   |      
T  23293167 acatcatcaccactaacggagcttttggacggagggactattttgatggacgtttgtaaaattcatggactaaatagatatttcgcaaaattcaagggcg 23293266  T
Q  104 aatttggccgattttttaaaatttaagaatgaatatgaggtattagtc 151  Q
    |||||||| |||||||  ||||| |||||  ||| |||||||||||||    
T  23293267 aatttggctgatttttcgaaattcaagaacaaatttgaggtattagtc 23293314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 12 - 151
Target Start/End: Complemental strand, 41977894 - 41977750
Alignment:
Q  12 tcatcaccactaacggggcttttggacggtgg-accattttgatggacgtc--tataattcaggaactaaatagatatttcgcaaaattcatgaa--aat 106  Q
    ||||||||| |||||  |||||||||||| || |||||||||| |||||||  || |||||||| ||||| | |||||||||| ||||||| | |   ||    
T  41977894 tcatcaccattaacgaagcttttggacggagggaccattttgacggacgtctgtaaaattcagggactaatttgatatttcgccaaattcagggacgtat 41977795  T
Q  107 ttggccgattttttaaaatttaagaatgaatatgaggtattagtc 151  Q
    |||||||||||||||||||| ||| | |||| |||||||||||||    
T  41977794 ttggccgattttttaaaattcaaggacgaatttgaggtattagtc 41977750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 9 - 98
Target Start/End: Complemental strand, 42279654 - 42279562
Alignment:
Q  9 acatcatcaccactaacggggcttttggacggtgg-accattttgatggacgtctataa--ttcaggaactaaatagatatttcgcaaaattc 98  Q
    ||||||||||||||||| | |||||||||||| || ||||||||||| ||||||| |||  |||||| ||||||||||||||| |||||||||    
T  42279654 acatcatcaccactaacagagcttttggacggagggaccattttgatagacgtctgtaaaattcagggactaaatagatattttgcaaaattc 42279562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 9 - 99
Target Start/End: Complemental strand, 46197867 - 46197774
Alignment:
Q  9 acatcatcaccactaacggggcttttggacggtgg-accattttgatggacgtctataa--ttcaggaactaaatagatatttcgcaaaattca 99  Q
    ||||||||| |||||||||  ||||||||||  || |||||||| |||||||||| |||  |||||||||||||||||||||| ||||||||||    
T  46197867 acatcatcatcactaacggaacttttggacgaagggaccattttaatggacgtctgtaaaattcaggaactaaatagatattttgcaaaattca 46197774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 9 - 103
Target Start/End: Original strand, 48830803 - 48830900
Alignment:
Q  9 acatcatcaccactaacggggcttttggacgg-tggaccattttgatggacgtc--tataattcaggaactaaatagatatttcgcaaaattcatgaa 103  Q
    ||||||||||||||||| | ||||||||||||  ||||||||||||||||||||  || ||||||   |||||||||||||||||  |||||||||||    
T  48830803 acatcatcaccactaacagagcttttggacggagggaccattttgatggacgtccgtaaaattcaaagactaaatagatatttcgttaaattcatgaa 48830900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 9 - 151
Target Start/End: Original strand, 3152215 - 3152362
Alignment:
Q  9 acatcatcaccactaacggggcttttggacggtgg-accattttgatggacgtctataa--ttcaggaactaaatagatatttcgcaaaattcatgaa-- 103  Q
    |||||||||| | ||||||  ||||||||||| || ||   |||||||||||||| |||  |||||| ||||| | |||||||||||||||||| | |      
T  3152215 acatcatcactattaacggaccttttggacggagggacggatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggatg 3152314  T
Q  104 aatttggccgattttttaaaatttaagaatgaatatgaggtattagtc 151  Q
    || ||||||||||||| |||||||||| || ||| |||||||||||||    
T  3152315 aaattggccgatttttcaaaatttaaggataaatttgaggtattagtc 3152362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 65 - 151
Target Start/End: Complemental strand, 23291658 - 23291570
Alignment:
Q  65 aattcaggaactaaatagatatttcgcaaaattcatgaa--aatttggccgattttttaaaatttaagaatgaatatgaggtattagtc 151  Q
    |||||||  |||||||||||||||||||||||||| | |  ||||||||||||||||||||||| ||| | |||| | |||||||||||    
T  23291658 aattcagagactaaatagatatttcgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttaaggtattagtc 23291570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 12 - 148
Target Start/End: Complemental strand, 2377173 - 2377032
Alignment:
Q  12 tcatcaccactaacggggcttttggacggtgg-accattttgatggacgtc--tataattcaggaactaaatagatatttcgcaaaattcatgaa--aat 106  Q
    |||||||||||||||| |||||| ||||| || ||||||||||||||||||  || |||||||  |||||||| || ||| |||||||||| | |  |||    
T  2377173 tcatcaccactaacggagcttttagacggaggaaccattttgatggacgtctgtaaaattcagagactaaatatattttttgcaaaattcagggacgaat 2377074  T
Q  107 ttggccgattttttaaaatttaagaatgaatatgaggtatta 148  Q
    |||| | |||||| |||||| || || |||| ||||||||||    
T  2377073 ttggtcaatttttgaaaattcaaaaacgaatttgaggtatta 2377032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 74 - 151
Target Start/End: Complemental strand, 48829435 - 48829356
Alignment:
Q  74 actaaatagatatttcgcaaaattcatga--aaatttggccgattttttaaaatttaagaatgaatatgaggtattagtc 151  Q
    |||||||||||||||||||||||||| ||  ||||||||| || |||| |||||| ||| | |||| |||||||||||||    
T  48829435 actaaatagatatttcgcaaaattcaggaataaatttggctgaattttgaaaattcaaggacgaatttgaggtattagtc 48829356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 65 - 157
Target Start/End: Original strand, 53094274 - 53094368
Alignment:
Q  65 aattcaggaactaaatagatatttcgcaaaattcatgaa--aatttggccgattttttaaaatttaagaatgaatatgaggtattagtcaaattt 157  Q
    |||||||| ||||| | |||||||||||||||||| | |  || ||||||||||||| |||||| ||| | |||| |||||||||||||| ||||    
T  53094274 aattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtcatattt 53094368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 74 - 152
Target Start/End: Original strand, 46114115 - 46114196
Alignment:
Q  74 actaaatagatatttcgcaaaattcatg--aaaatttggccga-ttttttaaaatttaagaatgaatatgaggtattagtca 152  Q
    |||||||||||||||||||||||||| |   |||||||||||| |||||||||||| ||| || ||| ||||||| ||||||    
T  46114115 actaaatagatatttcgcaaaattcaaggacaaatttggccgatttttttaaaattcaaggataaatttgaggtagtagtca 46114196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 65 - 151
Target Start/End: Original strand, 611223 - 611311
Alignment:
Q  65 aattcaggaactaaatagatatttcgcaaaattcatgaa--aatttggccgattttttaaaatttaagaatgaatatgaggtattagtc 151  Q
    ||||||||  |||||||| ||||||| |||||||| | |  |||||||| |||||||||||||| ||| | |||| |||||||||||||    
T  611223 aattcaggggctaaatagctatttcgaaaaattcagggacgaatttggctgattttttaaaattcaaggacgaatttgaggtattagtc 611311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 65 - 151
Target Start/End: Complemental strand, 38191983 - 38191895
Alignment:
Q  65 aattcaggaactaaatagatatttcgcaaaattcatgaa--aatttggccgattttttaaaatttaagaatgaatatgaggtattagtc 151  Q
    |||||||| ||||| | |||||||||||||||||| | |  || |||||| |||||| |||||||||| | |||| |||||||||||||    
T  38191983 aattcagggactaatttgatatttcgcaaaattcagggacgaaattggccaatttttcaaaatttaaggacgaatttgaggtattagtc 38191895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 65 - 151
Target Start/End: Original strand, 38193511 - 38193599
Alignment:
Q  65 aattcaggaactaaatagatatttcgcaaaattcatgaa--aatttggccgattttttaaaatttaagaatgaatatgaggtattagtc 151  Q
    |||||||| ||||| | |||||||||||||||||| | |  || ||||||||||||| |||||| ||| | |||| |||||||||||||    
T  38193511 aattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 38193599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 65 - 151
Target Start/End: Original strand, 41979353 - 41979441
Alignment:
Q  65 aattcaggaactaaatagatatttcgcaaaattcatgaa--aatttggccgattttttaaaatttaagaatgaatatgaggtattagtc 151  Q
    |||||||| ||||| | |||||||||||||||||| | |  || ||||||||||||| |||||| ||| | |||| |||||||||||||    
T  41979353 aattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 41979441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 65 - 151
Target Start/End: Complemental strand, 46308895 - 46308807
Alignment:
Q  65 aattcaggaactaaatagatatttcgcaaaattcatgaa--aatttggccgattttttaaaatttaagaatgaatatgaggtattagtc 151  Q
    |||||||| ||||| | |||||||||||||||||| | |  || ||||||||||||| |||||| ||| | |||| |||||||||||||    
T  46308895 aattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 46308807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 114 - 154
Target Start/End: Complemental strand, 27897188 - 27897148
Alignment:
Q  114 attttttaaaatttaagaatgaatatgaggtattagtcaaa 154  Q
    ||||||||||||||||||| |||| ||||||||||||||||    
T  27897188 attttttaaaatttaagaaagaatttgaggtattagtcaaa 27897148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 74 - 151
Target Start/End: Original strand, 51686404 - 51686483
Alignment:
Q  74 actaaatagatatttcgcaaaattcatgaa--aatttggccgattttttaaaatttaagaatgaatatgaggtattagtc 151  Q
    |||||||| ||||||||||||||| | | |  |||||||| ||||||| |||||||||| | |||| |||||||||||||    
T  51686404 actaaataaatatttcgcaaaatttagggacgaatttggctgatttttgaaaatttaaggacgaatttgaggtattagtc 51686483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 65 - 126
Target Start/End: Original strand, 54412548 - 54412611
Alignment:
Q  65 aattcaggaactaaatagatatttcgcaaaattcatgaa--aatttggccgattttttaaaatt 126  Q
    |||||||||||||||||||||| |||||||||||| | |  |||||| || |||||||||||||    
T  54412548 aattcaggaactaaatagatatctcgcaaaattcaaggacgaatttgaccaattttttaaaatt 54412611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 12 - 62
Target Start/End: Original strand, 7884873 - 7884924
Alignment:
Q  12 tcatcaccactaacggggcttttggacgg-tggaccattttgatggacgtct 62  Q
    ||||||||||||||||  |||||||||||  |||||||||||||||||||||    
T  7884873 tcatcaccactaacggaacttttggacggagggaccattttgatggacgtct 7884924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 153
Target Start/End: Complemental strand, 46609237 - 46609147
Alignment:
Q  65 aattcaggaactaaatagatatttcgcaaaattcatgaa--aatttggccgattttttaaaatttaagaatgaatatgaggtattagtcaa 153  Q
    |||||||| ||||| | |||||||| ||||||||| | |  || ||||||||||||| |||||| ||||| |||| |||| ||||||||||    
T  46609237 aattcagggactaatttgatatttcacaaaattcagggacgaaattggccgatttttcaaaattcaagaacgaatttgagatattagtcaa 46609147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 105 - 151
Target Start/End: Original strand, 7884942 - 7884988
Alignment:
Q  105 atttggccgattttttaaaatttaagaatgaatatgaggtattagtc 151  Q
    |||||||||||||||||||||| ||| | |||| |||||||||||||    
T  7884942 atttggccgattttttaaaattcaaggacgaatttgaggtattagtc 7884988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 77 - 152
Target Start/End: Complemental strand, 30598413 - 30598336
Alignment:
Q  77 aaatagatatttcgcaaaattcatgaa--aatttggccgattttttaaaatttaagaatgaatatgaggtattagtca 152  Q
    |||||| |||||||||||||||| | |  |||||| ||||||||| |||||| ||| | |||| ||||||||||||||    
T  30598413 aaatagctatttcgcaaaattcagggacaaatttgaccgatttttgaaaattcaaggacgaatttgaggtattagtca 30598336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 65 - 148
Target Start/End: Original strand, 42282474 - 42282559
Alignment:
Q  65 aattcaggaactaaatagatatttcgcaaaattcatgaa--aatttggccgattttttaaaatttaagaatgaatatgaggtatta 148  Q
    |||||| | ||||||||||||||||||||||||||  ||  |||||| | ||||||| |||||| ||| | |||| ||||||||||    
T  42282474 aattcaaggactaaatagatatttcgcaaaattcagaaacgaatttgactgatttttgaaaattcaaggacgaatttgaggtatta 42282559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 77 - 152
Target Start/End: Complemental strand, 44268057 - 44267980
Alignment:
Q  77 aaatagatatttcgcaaaattcatgaa--aatttggccgattttttaaaatttaagaatgaatatgaggtattagtca 152  Q
    |||||| ||||||||||||||||   |  |||||||||||||||| |||||| ||| | |||| ||||||||||||||    
T  44268057 aaatagctatttcgcaaaattcagagatgaatttggccgatttttgaaaattcaaggacgaatttgaggtattagtca 44267980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 44276193 - 44276247
Alignment:
Q  9 acatcatcaccactaacggggcttttggacgg-tggaccattttgatggacgtct 62  Q
    ||||||||||||||||| | ||||||||||||  ||||||||||||||| |||||    
T  44276193 acatcatcaccactaacagagcttttggacggagggaccattttgatgggcgtct 44276247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 9 - 152
Target Start/End: Complemental strand, 44794354 - 44794207
Alignment:
Q  9 acatcatcaccactaacggggcttttggacggtgg-accattttgatggacgtct--ataattcaggaactaaatagatatttcgcaaaattcatgaa-- 103  Q
    |||||||||| | ||||||  ||||||||||| || || | |||||||||| |||  | |||||||| ||||| | |||||||||||||||||| | |      
T  44794354 acatcatcactattaacggaccttttggacggagggacgaatttgatggacttctgcaaaattcagggactaatttgatatttcgcaaaattcagggatg 44794255  T
Q  104 aatttggccgattttttaaaatttaagaatgaatatgaggtattagtca 152  Q
    || |||||||| |||| |||||| ||| | |||| ||||||||||||||    
T  44794254 aaattggccga-ttttcaaaattcaaggacgaatttgaggtattagtca 44794207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 151
Target Start/End: Complemental strand, 3150340 - 3150252
Alignment:
Q  65 aattcaggaactaaatagatatttcgcaaaattcatgaa--aatttggccgattttttaaaatttaagaatgaatatgaggtattagtc 151  Q
    |||||||| ||||| | |||||||||||||||||| | |  || ||| ||||||||| |||||| ||| | |||| |||||||||||||    
T  3150340 aattcagggactaatttgatatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 3150252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 151
Target Start/End: Original strand, 44795891 - 44795979
Alignment:
Q  65 aattcaggaactaaatagatatttcgcaaaattcatgaa--aatttggccgattttttaaaatttaagaatgaatatgaggtattagtc 151  Q
    |||||| | ||||| | |||||||||||||||||| |||  || || |||||||||| |||||| ||| | |||| |||||||||||||    
T  44795891 aattcatggactaatttgatatttcgcaaaattcaggaacgaaattagccgatttttcaaaattcaaggacgaatttgaggtattagtc 44795979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 151
Target Start/End: Original strand, 54900075 - 54900163
Alignment:
Q  65 aattcaggaactaaatagatatttcgcaaaattcatgaa--aatttggccgattttttaaaatttaagaatgaatatgaggtattagtc 151  Q
    |||||||| || || | |||||||||||||||||| | |  || ||||||||||||| |||||| ||| | |||| |||||||||||||    
T  54900075 aattcagggacaaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 54900163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 12 - 59
Target Start/End: Complemental strand, 600853 - 600805
Alignment:
Q  12 tcatcaccactaacggggcttttggacgg-tggaccattttgatggacg 59  Q
    |||||||||||||||| |||||| |||||  ||||||||||||||||||    
T  600853 tcatcaccactaacggagcttttagacggagggaccattttgatggacg 600805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 65 - 150
Target Start/End: Original strand, 2378984 - 2379071
Alignment:
Q  65 aattcaggaactaaatagatatttcgcaaaattcatgaa--aatttggccgattttttaaaatttaagaatgaatatgaggtattagt 150  Q
    |||||| | ||||||||| ||||| |||||||||| | |  || ||| |||||||||||||||| ||| | |||| ||||||||||||    
T  2378984 aattcaaggactaaatagctattttgcaaaattcagggacgaaattgaccgattttttaaaattcaaggacgaatttgaggtattagt 2379071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 81; Significance: 7e-38; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 12 - 153
Target Start/End: Original strand, 8609787 - 8609933
Alignment:
Q  12 tcatcaccactaacggggcttttggacggtgg-accattttgatggacgtctataa--ttcaggaactaaatagatatttcgcaaaattcatgaa--aat 106  Q
    |||||||||||||||| |||||||||||| || ||||||||||||||||||| |||  |||||| |||||||||||||||||||||||||| | |  |||    
T  8609787 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaat 8609886  T
Q  107 ttggccgattttttaaaatttaagaatgaatatgaggtattagtcaa 153  Q
    |||||||||||||||||||| ||||| |||| |||||||||||||||    
T  8609887 ttggccgattttttaaaattcaagaacgaatttgaggtattagtcaa 8609933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 9 - 151
Target Start/End: Complemental strand, 13282625 - 13282478
Alignment:
Q  9 acatcatcaccactaacggggcttttggacggtgg-accattttgatggacgtctataa--ttcaggaactaaatagatatttcgcaaaattcatgaa-- 103  Q
    ||||||||||||||||||| |||||||||||| || ||||||||||||||||| | |||  |||||| |||||||||||||||||||||||||| | |      
T  13282625 acatcatcaccactaacggagcttttggacggagggaccattttgatggacgtttgtaaaattcagggactaaatagatatttcgcaaaattcagggacg 13282526  T
Q  104 aatttggccgattttttaaaatttaagaatgaatatgaggtattagtc 151  Q
    ||||||||||||||||||||||| ||| | |||| |||||||||||||    
T  13282525 aatttggccgattttttaaaattcaaggacgaatttgaggtattagtc 13282478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 12 - 152
Target Start/End: Complemental strand, 38547372 - 38547227
Alignment:
Q  12 tcatcaccactaacggggcttttggacggtgg-accattttgatggacgtctataa--ttcaggaactaaatagatatttcgcaaaattcatgaaa--at 106  Q
    |||||||||||||||| ||||||||| || || ||||||||||||||||||| |||  |||||| ||||| | |||||||||||||||||||| |   ||    
T  38547372 tcatcaccactaacggagcttttggatggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcatggacgtat 38547273  T
Q  107 ttggccgattttttaaaatttaagaatgaatatgaggtattagtca 152  Q
    |||||||||||||||||||| ||| | |||  ||||||||||||||    
T  38547272 ttggccgattttttaaaattcaaggacgaacttgaggtattagtca 38547227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 9 - 151
Target Start/End: Original strand, 41042581 - 41042728
Alignment:
Q  9 acatcatcaccactaacggggcttttggacgg-tggaccattttgatggacg--tctataattcaggaactaaatagatatttcgcaaaattcatg--aa 103  Q
    ||||||||||||||||||| ||||||||||||  ||||||||||||||||||  | || |||||||| |||||||||||||||| ||||||||| |   |    
T  41042581 acatcatcaccactaacggagcttttggacggagggaccattttgatggacgcctgtaaaattcagggactaaatagatatttcacaaaattcagggaca 41042680  T
Q  104 aatttggccgattttttaaaatttaagaatgaatatgaggtattagtc 151  Q
    ||||||||| ||||||||||||| ||| | | || | |||||||||||    
T  41042681 aatttggccaattttttaaaattcaaggacggatttaaggtattagtc 41042728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 9 - 153
Target Start/End: Original strand, 26242311 - 26242460
Alignment:
Q  9 acatcatcaccactaacggggcttttggacggtgg-accattttgatggacgtctataa--ttcaggaactaaatagatatttcgcaaaattcatgaa-- 103  Q
    |||||||| |||||||||| |||||||||||| || ||||||||||||||||||| |||  |||||  |||||||||||||||||||||||| | | |      
T  26242311 acatcatcgccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagagactaaatagatatttcgcaaaatttagggacg 26242410  T
Q  104 aatttggccgattttttaaaatttaagaatgaatatgaggtattagtcaa 153  Q
    |||||||| ||||||| |||||| ||||| |||  |||||||||| ||||    
T  26242411 aatttggctgatttttgaaaattcaagaacgaaattgaggtattaatcaa 26242460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 12 - 151
Target Start/End: Original strand, 13108336 - 13108480
Alignment:
Q  12 tcatcaccactaacggggcttttggacggtgg-accattttgatggacgtctataa--ttcaggaactaaatagatatttcgcaaaattcatgaa--aat 106  Q
    |||||||||||||||  |||||||||||| || ||||||||||||||||||| |||  |||||| ||||| | |||||||||||||||||| | |   ||    
T  13108336 tcatcaccactaacgaagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacgtat 13108435  T
Q  107 ttggccgattttttaaaatttaagaatgaatatgaggtattagtc 151  Q
    || ||||||||||||||||| ||| | |||| |||| ||||||||    
T  13108436 ttagccgattttttaaaattcaaggacgaatttgagttattagtc 13108480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 9 - 99
Target Start/End: Original strand, 41825641 - 41825734
Alignment:
Q  9 acatcatcaccactaacggggcttttggacggtg-gaccattttgatggacgtctataa--ttcaggaactaaatagatatttcgcaaaattca 99  Q
    |||||||||| |||||| | |||||||||||| | |||||||||||||||||||| |||  |||||| ||||||||||||||||||||||||||    
T  41825641 acatcatcactactaacagagcttttggacggagtgaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattca 41825734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 65 - 151
Target Start/End: Original strand, 42943427 - 42943515
Alignment:
Q  65 aattcaggaactaaatagatatttcgcaaaattcatgaa--aatttggccgattttttaaaatttaagaatgaatatgaggtattagtc 151  Q
    |||||||| |||||||||||||||||||||||||| | |  ||||||||||||||||||||||| ||| | |||| |||||||||||||    
T  42943427 aattcagggactaaatagatatttcgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtattagtc 42943515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 9 - 148
Target Start/End: Complemental strand, 42941921 - 42941777
Alignment:
Q  9 acatcatcaccactaacggggcttttggacggtgg-accattttgatggacgtctataa--ttcaggaactaaatagatatttcgcaaaattcatgaa-- 103  Q
    |||||||| |||||||||| | |||||||||| || || |||||||||||| ||| |||  |||||| |||||||| ||||||| ||||||||| | |      
T  42941921 acatcatctccactaacggagattttggacggagggactattttgatggacatctgtaaaattcagggactaaataaatatttctcaaaattcagggacg 42941822  T
Q  104 aatttggccgattttttaaaatttaagaatgaatatgaggtatta 148  Q
    |||||||| |||||||||||||| ||| | |||| ||||||||||    
T  42941821 aatttggctgattttttaaaattcaaggacgaatttgaggtatta 42941777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 65 - 154
Target Start/End: Original strand, 5038063 - 5038153
Alignment:
Q  65 aattcaggaactaaatagatatttcgcaaaattcatgaa--aatttggccgattttttaaaatttaagaatgaatatgaggtattagtcaaa 154  Q
    |||||||| ||||||||| |||||||||||||||| |||  |||||| |||||||||||||||| ||| | |||| ||||||||||||||||    
T  5038063 aattcagggactaaatagctatttcgcaaaattcaagaacgaatttgaccgattttttaaaattcaag-acgaatttgaggtattagtcaaa 5038153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 9 - 96
Target Start/End: Original strand, 13486096 - 13486186
Alignment:
Q  9 acatcatcaccactaacggggcttttggacggtgg-accattttgatggacgtctataa--ttcaggaactaaatagatatttcgcaaaat 96  Q
    |||||||||| ||||| || |||||||||| | || ||||||||||||||||||| |||  |||||| |||||||||||||||||||||||    
T  13486096 acatcatcactactaatggagcttttggacagagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaat 13486186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 9 - 99
Target Start/End: Original strand, 7745109 - 7745202
Alignment:
Q  9 acatcatcaccactaacggggcttttggacgg-tggaccattttgatggacgtc--tataattcaggaactaaatagatatttcgcaaaattca 99  Q
    ||||||||||||||||||| ||||||||| ||  |||||||||||||||| |||  || ||| |||| |||||||| |||||||||||||||||    
T  7745109 acatcatcaccactaacggagcttttggatggagggaccattttgatggatgtctgtaaaatacagggactaaataaatatttcgcaaaattca 7745202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 9 - 99
Target Start/End: Original strand, 9673162 - 9673255
Alignment:
Q  9 acatcatcaccactaacggggcttttggacggtgg-accattttgatggacgtctataa--ttcaggaactaaatagatatttcgcaaaattca 99  Q
    ||||||||||||||||||  |||||| ||||| || ||||||||||||||||||| |||  |||||| | |||||||||||||| |||||||||    
T  9673162 acatcatcaccactaacgaagcttttagacggagggaccattttgatggacgtctgtaaaattcagggattaaatagatatttcacaaaattca 9673255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 9 - 99
Target Start/End: Complemental strand, 22272483 - 22272390
Alignment:
Q  9 acatcatcaccactaacggggcttttggacggtgg-accattttgatggacgtctataa--ttcaggaactaaatagatatttcgcaaaattca 99  Q
    ||||||||||||||||||| ||||||||| || || || |||||||||||||| | |||  |||||| |||||||||||||| |||||||||||    
T  22272483 acatcatcaccactaacggagcttttggatggagggactattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattca 22272390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 43 - 150
Target Start/End: Complemental strand, 5036557 - 5036446
Alignment:
Q  43 gaccattttgatggacgtctataa--ttcaggaactaaatagatatttcgcaaaattcatgaa--aatttggccgattttttaaaatttaagaatgaata 138  Q
    |||||||||||| ||||||| |||  |||| | |||||||||||||||| ||||||||| | |  |||||| | |||||||||||||||||| | ||||     
T  5036557 gaccattttgatagacgtctgtaaaattcaaggactaaatagatatttcacaaaattcagggacgaatttgacggattttttaaaatttaaggacgaatt 5036458  T
Q  139 tgaggtattagt 150  Q
    ||||||||||||    
T  5036457 tgaggtattagt 5036446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 65 - 151
Target Start/End: Original strand, 22273892 - 22273980
Alignment:
Q  65 aattcaggaactaaatagatatttcgcaaaattcat-ga-aaatttggccgattttttaaaatttaagaatgaatatgaggtattagtc 151  Q
    |||||||| ||||||||||||||| ||||||||||  || |||||||||||||||||||||||| ||| |  ||| |||||||||||||    
T  22273892 aattcagggactaaatagatattttgcaaaattcagagacaaatttggccgattttttaaaattcaaggacaaatttgaggtattagtc 22273980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 74 - 151
Target Start/End: Original strand, 34681076 - 34681155
Alignment:
Q  74 actaaatagatatttcgcaaaattcatgaa--aatttggccgattttttaaaatttaagaatgaatatgaggtattagtc 151  Q
    |||||||||||||||||||||||||| | |  |||||||||||||||| |||||| ||| | |||| |||||||||||||    
T  34681076 actaaatagatatttcgcaaaattcagggacgaatttggccgatttttgaaaattcaaggacgaatttgaggtattagtc 34681155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 74 - 151
Target Start/End: Complemental strand, 26238805 - 26238726
Alignment:
Q  74 actaaatagatatttcgcaaaattcatgaa--aatttggccgattttttaaaatttaagaatgaatatgaggtattagtc 151  Q
    |||||||||||||||||||||||||| | |  |||||||| ||||||| |||||| ||| | |||| |||||||||||||    
T  26238805 actaaatagatatttcgcaaaattcagggacgaatttggctgatttttgaaaattcaaggacgaatttgaggtattagtc 26238726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 49 - 151
Target Start/End: Complemental strand, 27691260 - 27691154
Alignment:
Q  49 tttgatggacgtctataa--ttcaggaactaaatagatatttcgcaaaattcatgaa--aatttggccgattttttaaaatttaagaatgaatatgaggt 144  Q
    |||||||||||||| |||  |||||| ||||| | |||||||||||||||||| | |  || ||||||||||||| |||||| ||| | |||| ||||||    
T  27691260 tttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggt 27691161  T
Q  145 attagtc 151  Q
    |||||||    
T  27691160 attagtc 27691154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 65 - 154
Target Start/End: Complemental strand, 13106892 - 13106801
Alignment:
Q  65 aattcaggaactaaatagatatttcgcaaaattcatgaa--aatttggccgattttttaaaatttaagaatgaatatgaggtattagtcaaa 154  Q
    |||||||| ||||| | |||||||||||||||||| | |  || ||||||||||||| |||||| ||| | |||| | ||||||||||||||    
T  13106892 aattcagggactaatttgatatttcgcaaaattcagggatgaaattggccgatttttcaaaattcaaggacgaatttaaggtattagtcaaa 13106801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 161
Target Start/End: Original strand, 38548832 - 38548930
Alignment:
Q  65 aattcaggaactaaatagatatttcgcaaaattcatgaa--aatttggccgattttttaaaatttaagaatgaatatgaggtattagtcaaatttatat 161  Q
    |||||||| | ||| | |||||||||||||||||| | |  || ||||||||||||| |||||| ||| | |||| |||||||||||||| || |||||    
T  38548832 aattcagggattaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtcatatatatat 38548930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 65 - 152
Target Start/End: Original strand, 33762714 - 33762803
Alignment:
Q  65 aattcaggaactaaatagatatttcgcaaaattcatgaa--aatttggccgattttttaaaatttaagaatgaatatgaggtattagtca 152  Q
    |||||||| ||||| | ||||||||| |||||||| | |  || ||||||||||||| |||||| ||| | |||| ||||||||||||||    
T  33762714 aattcagggactaatttgatatttcgtaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtca 33762803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 9 - 99
Target Start/End: Original strand, 40339677 - 40339770
Alignment:
Q  9 acatcatcaccactaacggggcttttggacggtgg-accattttgatggacgtctataa--ttcaggaactaaatagatatttcgcaaaattca 99  Q
    |||||||||| |||||||| ||||||||| |  || ||||||||||||||| ||| |||  |||| | |||||||||||||||| || ||||||    
T  40339677 acatcatcactactaacggagcttttggatgaagggaccattttgatggacatctgtaaaattcatggactaaatagatatttcacataattca 40339770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 151
Target Start/End: Original strand, 601705 - 601793
Alignment:
Q  65 aattcaggaactaaatagatatttcgcaaaattcatgaa--aatttggccgattttttaaaatttaagaatgaatatgaggtattagtc 151  Q
    |||||||| ||||| | ||||||||| |||||||| | |  || ||||||||||||| |||||| ||| | |||| |||||||||||||    
T  601705 aattcagggactaatttgatatttcgaaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 601793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 151
Target Start/End: Original strand, 27692838 - 27692926
Alignment:
Q  65 aattcaggaactaaatagatatttcgcaaaattcatgaa--aatttggccgattttttaaaatttaagaatgaatatgaggtattagtc 151  Q
    |||||||| ||||| | ||||||| |||||||||| | |  || ||||||||||||| |||||| ||| | |||| |||||||||||||    
T  27692838 aattcagggactaatttgatattttgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 27692926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 65 - 101
Target Start/End: Complemental strand, 9672065 - 9672029
Alignment:
Q  65 aattcaggaactaaatagatatttcgcaaaattcatg 101  Q
    ||||| || ||||||||||||||||||||||||||||    
T  9672065 aattcggggactaaatagatatttcgcaaaattcatg 9672029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 78; Significance: 4e-36; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 9 - 155
Target Start/End: Complemental strand, 27087430 - 27087279
Alignment:
Q  9 acatcatcaccactaacggggcttttggacgg-tggaccattttgatggacgtctataa--ttcaggaactaaatagatatttcgcaaaattcatgaa-- 103  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||||||||||| | |||  |||||| |||||||||||||||||||||||||| | |      
T  27087430 acatcatcaccactaacggagcttttggacggatgggccattttgatggacgtttgtaaaattcagggactaaatagatatttcgcaaaattcagggaca 27087331  T
Q  104 aatttggccgattttttaaaatttaagaatgaatatgaggtattagtcaaat 155  Q
    |||||| |||||||||||||||||||| | |||| |||||||||||||||||    
T  27087330 aatttgaccgattttttaaaatttaaggacgaatttgaggtattagtcaaat 27087279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 12 - 153
Target Start/End: Original strand, 31238475 - 31238621
Alignment:
Q  12 tcatcaccactaacggggcttttggacgg-tggaccattttgatggacgtctataa--ttcaggaactaaatagatatttcgcaaaattcatg--aaaat 106  Q
    |||||||||||||||| |||||||||| | |||||||||||||||||||||| |||  |||||| |||||||||||||||||||||||||| |   ||||    
T  31238475 tcatcaccactaacggagcttttggacagatggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacaaat 31238574  T
Q  107 ttggccgattttttaaaatttaagaatgaatatgaggtattagtcaa 153  Q
    |||||||||||||||||||| ||| |  ||| |||||||||||||||    
T  31238575 ttggccgattttttaaaattcaaggacaaatttgaggtattagtcaa 31238621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 12 - 153
Target Start/End: Original strand, 4855946 - 4856092
Alignment:
Q  12 tcatcaccactaacggggcttttggacggtgg-accattttgatggacgtctataa--ttcaggaactaaatagatatttcgcaaaattcatgaa--aat 106  Q
    ||||||||| |||||| |||||||||||| || ||||||||||||||||||| |||  |||||| ||||| | |||||||||||||||||| | |   ||    
T  4855946 tcatcaccattaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacgtat 4856045  T
Q  107 ttggccgattttttaaaatttaagaatgaatatgaggtattagtcaa 153  Q
    |||||||||||||||||||| ||| | |||| |||||||||||||||    
T  4856046 ttggccgattttttaaaattcaaggacgaatttgaggtattagtcaa 4856092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 12 - 153
Target Start/End: Original strand, 25278348 - 25278494
Alignment:
Q  12 tcatcaccactaacggggcttttggacggtgg-accattttgatggacgtctataa--ttcaggaactaaatagatatttcgcaaaattcatgaa--aat 106  Q
    |||||||||||||||| |||||||||||| || ||||||||||||||||| | |||  |||| | ||||||||| |||||||||||||||| | |  |||    
T  25278348 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtatgtaaaattcaaggactaaataggtatttcgcaaaattcagggacgaat 25278447  T
Q  107 ttggccgattttttaaaatttaagaatgaatatgaggtattagtcaa 153  Q
    ||| |||||||||||||||| ||| | |||| |||||||||||||||    
T  25278448 ttgaccgattttttaaaattcaaggacgaatttgaggtattagtcaa 25278494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 12 - 152
Target Start/End: Original strand, 6818658 - 6818803
Alignment:
Q  12 tcatcaccactaacggggcttttggacgg-tggaccattttgatggacgtc--tataattcaggaactaaatagatatttcgcaaaattcatgaa--aat 106  Q
    |||||||||||||||| ||||||||||||  ||||||||||||||||||||  || |||||||| ||||||||||||||| || |||| || | |  | |    
T  6818658 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgctaaatccagggacgagt 6818757  T
Q  107 ttggccgattttttaaaatttaagaatgaatatgaggtattagtca 152  Q
    |||||||||||||||||||| ||| | |||| ||||||||||||||    
T  6818758 ttggccgattttttaaaattcaaggacgaatttgaggtattagtca 6818803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 12 - 151
Target Start/End: Original strand, 34778118 - 34778262
Alignment:
Q  12 tcatcaccactaacggggcttttggacgg-tggaccattttgatggacgtc--tataattcaggaactaaatagatatttcgcaaaattcatgaa--aat 106  Q
    |||||||||||||||| ||||||||||||  ||||||||||||||||| ||  || |||||||| ||||| | |||||||||||||||||| | |   ||    
T  34778118 tcatcaccactaacggagcttttggacggagggaccattttgatggacatctgtaaaattcagggactaatttgatatttcgcaaaattcagggacgtat 34778217  T
Q  107 ttggccgattttttaaaatttaagaatgaatatgaggtattagtc 151  Q
    |||||||||||||||||||| ||| | |||| |||||||||||||    
T  34778218 ttggccgattttttaaaattcaaggacgaatttgaggtattagtc 34778262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 9 - 151
Target Start/End: Complemental strand, 2869726 - 2869579
Alignment:
Q  9 acatcatcaccactaacggggcttttggacggtgg-accattttgatggacgtctataa--ttcaggaactaaatagatatttcgcaaaattcatgaa-- 103  Q
    ||||||||||||||||| | |||||||||||| || ||||||||||||||||||| |||  || ||  |||||||||||||||||||||||||| | |      
T  2869726 acatcatcaccactaacagagcttttggacggagggaccattttgatggacgtctgtaaaatttagagactaaatagatatttcgcaaaattcagggacg 2869627  T
Q  104 aatttggccgattttttaaaatttaagaatgaatatgaggtattagtc 151  Q
    |||||| ||||||||| |||||| ||| | |||| |||||||||||||    
T  2869626 aatttgaccgatttttgaaaattcaaggacgaatttgaggtattagtc 2869579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 9 - 154
Target Start/End: Original strand, 51896129 - 51896279
Alignment:
Q  9 acatcatcaccactaacggggcttttggacggtgg-accattttgatggacgtctataa--ttcaggaactaaatagatatttcgcaaaattcatg--aa 103  Q
    ||||||||||||||||| | |||||||||||| || || |||||||||||| ||| |||  |||||| |||||||||||||||||||||||||| |   |    
T  51896129 acatcatcaccactaacagagcttttggacggagggactattttgatggacatctgtaaaattcagggactaaatagatatttcgcaaaattcagggaca 51896228  T
Q  104 aatttggccgattttttaaaatttaagaatgaatatgaggtattagtcaaa 154  Q
    |||||| | |||||||||||||||||| | | || |||||||| |||||||    
T  51896229 aatttgactgattttttaaaatttaaggacggatttgaggtatcagtcaaa 51896279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 9 - 99
Target Start/End: Complemental strand, 15104588 - 15104495
Alignment:
Q  9 acatcatcaccactaacggggcttttggacggt-ggaccattttgatggacgtctataa--ttcaggaactaaatagatatttcgcaaaattca 99  Q
    |||||||||||||||| || ||||||||||||  ||||||||||||||||||||| |||  |||||| ||||||||||||||||||||||||||    
T  15104588 acatcatcaccactaatggagcttttggacggaaggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattca 15104495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 12 - 151
Target Start/End: Complemental strand, 37344486 - 37344342
Alignment:
Q  12 tcatcaccactaacggggcttttggacggtgg-accattttgatggacgtctataa--ttcaggaactaaatagatatttcgcaaaattcatgaa--aat 106  Q
    |||||||||||||||| |||||||||||| || ||||||||||||||||| | |||  ||||   ||||||||| |||||||||||||||| | |  |||    
T  37344486 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtatgtaaaattcaaagactaaataggtatttcgcaaaattcagggacgaat 37344387  T
Q  107 ttggccgattttttaaaatttaagaatgaatatgaggtattagtc 151  Q
    ||| |||||||||||||||| ||| | |||| |||||||||||||    
T  37344386 ttgaccgattttttaaaattcaaggacgaatttgaggtattagtc 37344342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 65 - 154
Target Start/End: Complemental strand, 31236907 - 31236816
Alignment:
Q  65 aattcaggaactaaatagatatttcgcaaaattcatg--aaaatttggccgattttttaaaatttaagaatgaatatgaggtattagtcaaa 154  Q
    ||||||||||||||||||||||||||||||||||| |   ||||||| |||||||||||||||| ||| | |||| ||||||||||||||||    
T  31236907 aattcaggaactaaatagatatttcgcaaaattcagggacaaatttgaccgattttttaaaattcaaggacgaatttgaggtattagtcaaa 31236816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 9 - 152
Target Start/End: Original strand, 3013447 - 3013601
Alignment:
Q  9 acatcatcaccactaacggggcttttggacggtgg-accattttgatg------gacgtctataa--ttcaggaactaaatagatatttcgcaaaattca 99  Q
    ||||||||||||||||||| |||||||||||| || || |||||||||      ||||||| |||  |||||| ||||||||||||||||||||||||||    
T  3013447 acatcatcaccactaacggagcttttggacggagggactattttgatgtccatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattca 3013546  T
Q  100 tgaa--aatttggccgattttttaaaatttaagaatgaatatgaggtattagtca 152  Q
    || |  |||||| | ||| |||||||||| ||| | |||| ||||||||||||||    
T  3013547 tggacgaatttgactgatgttttaaaattcaaggacgaatttgaggtattagtca 3013601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 13 - 158
Target Start/End: Original strand, 50556078 - 50556228
Alignment:
Q  13 catcaccactaacggggcttttggacggtgg-accattttgatggacgtctataa--ttcaggaactaaatagatatttcgcaaaattcatgaa--aatt 107  Q
    ||||||||||||||| |||||||||||| || ||||||||||| ||||||| |||  || ||| ||||||||||||||||||||||||||   |  ||||    
T  50556078 catcaccactaacggagcttttggacggagggaccattttgatagacgtctgtaaaatttagggactaaatagatatttcgcaaaattcagagacgaatt 50556177  T
Q  108 tggccgattttttaaaatttaagaatgaatatgaggtattagtcaaattta 158  Q
    || | |||||||||||||| ||  | |||| |||| |||||||| ||||||    
T  50556178 tgactgattttttaaaattcaaagacgaatttgagatattagtctaattta 50556228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 65 - 148
Target Start/End: Complemental strand, 3011943 - 3011858
Alignment:
Q  65 aattcaggaactaaatagatatttcgcaaaattcatgaa--aatttggccgattttttaaaatttaagaatgaatatgaggtatta 148  Q
    |||||||  |||||||||||||||||||||||||| |||  |||||| | |||||||||||||||||| | |||| ||||||||||    
T  3011943 aattcagagactaaatagatatttcgcaaaattcaggaacgaatttgactgattttttaaaatttaaggacgaatttgaggtatta 3011858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 65 - 152
Target Start/End: Original strand, 25278989 - 25279078
Alignment:
Q  65 aattcaggaactaaatagatatttcgcaaaattcatgaa--aatttggccgattttttaaaatttaagaatgaatatgaggtattagtca 152  Q
    |||||||| |||||||||||||||||||||||| | |||  |||||||| ||||||| |||||| ||| | |||| ||||||||||||||    
T  25278989 aattcagggactaaatagatatttcgcaaaatttaggaacgaatttggctgatttttgaaaattcaaggacgaatttgaggtattagtca 25279078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 77 - 152
Target Start/End: Original strand, 37088149 - 37088226
Alignment:
Q  77 aaatagatatttcgcaaaattcatgaa--aatttggccgattttttaaaatttaagaatgaatatgaggtattagtca 152  Q
    |||||| |||||||||||||||| |||  ||||||||||||||||||||||| ||| | |||| ||||||||||||||    
T  37088149 aaatagctatttcgcaaaattcaggaacgaatttggccgattttttaaaattcaaggaagaatttgaggtattagtca 37088226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 9 - 152
Target Start/End: Original strand, 46583533 - 46583681
Alignment:
Q  9 acatcatcaccactaacggggcttttggacggtgg-accattttgatggacgtctataa--ttcaggaactaaatagatatttcgcaaaattcatg--aa 103  Q
    |||||||||||| ||||||  ||||||||||| || || | |||||||||||||| |||  |||||| ||||| | |||||||||||||||||| |   |    
T  46583533 acatcatcaccattaacggaccttttggacggagggacaaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggaca 46583632  T
Q  104 aatttggccgattttttaaaatttaagaatgaatatgaggtattagtca 152  Q
    || ||| ||||||||| |||||| ||| | |||| ||||||||||||||    
T  46583633 aaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtca 46583681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 74 - 153
Target Start/End: Complemental strand, 25278933 - 25278852
Alignment:
Q  74 actaaatagatatttcgcaaaattcatgaa--aatttggccgattttttaaaatttaagaatgaatatgaggtattagtcaa 153  Q
    |||||||||||||||||||||||||| | |  |||||| | ||||||| |||||| ||| |||||| |||||||||||||||    
T  25278933 actaaatagatatttcgcaaaattcagggacaaatttgactgatttttgaaaattcaaggatgaatttgaggtattagtcaa 25278852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 65 - 154
Target Start/End: Complemental strand, 25276830 - 25276739
Alignment:
Q  65 aattcaggaactaaatagatatttcgcaaaattcatgaa--aatttggccgattttttaaaatttaagaatgaatatgaggtattagtcaaa 154  Q
    |||||||| ||||| | |||||||||||||||||| | |  || ||||||||||||| |||||| ||| | |||| ||||||||||||||||    
T  25276830 aattcagggactaatttgatatttcgcaaaattcaaggatgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtcaaa 25276739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 65 - 150
Target Start/End: Complemental strand, 50554251 - 50554164
Alignment:
Q  65 aattcaggaactaaatagatatttcgcaaaattcatgaa--aatttggccgattttttaaaatttaagaatgaatatgaggtattagt 150  Q
    |||||||||||||||||| |||||  ||||||||| | |  |||||| |||||||||||||||| ||| | |||| ||||||||||||    
T  50554251 aattcaggaactaaatagctattttacaaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttgaggtattagt 50554164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 65 - 148
Target Start/End: Complemental strand, 51894655 - 51894570
Alignment:
Q  65 aattcaggaactaaatagatatttcgcaaaattca-tga-aaatttggccgattttttaaaatttaagaatgaatatgaggtatta 148  Q
    |||||||| |||||||| |||||||||||||||||  || ||||||| || ||||||||||||| ||||| |||| ||| ||||||    
T  51894655 aattcagggactaaatatatatttcgcaaaattcagagacaaatttgacccattttttaaaattcaagaacgaatttgatgtatta 51894570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 65 - 154
Target Start/End: Complemental strand, 26223675 - 26223584
Alignment:
Q  65 aattcaggaactaaatagatatttcgcaaaattcatgaa--aatttggccgattttttaaaatttaagaatgaatatgaggtattagtcaaa 154  Q
    |||||||| ||||| | |||||||||||||||||| | |  || ||| ||||||||| |||||| ||| | |||| ||||||||||||||||    
T  26223675 aattcagggactaatttgatatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtcaaa 26223584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 74 - 151
Target Start/End: Complemental strand, 52641967 - 52641888
Alignment:
Q  74 actaaatagatatttcgcaaaattcatgaa--aatttggccgattttttaaaatttaagaatgaatatgaggtattagtc 151  Q
    |||||||| ||||||||||||||||| | |  |||||||| ||||||| |||||| ||| | |||| |||||||||||||    
T  52641967 actaaatatatatttcgcaaaattcagggacgaatttggctgatttttgaaaattcaaggacgaatttgaggtattagtc 52641888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 151
Target Start/End: Complemental strand, 34776657 - 34776569
Alignment:
Q  65 aattcaggaactaaatagatatttcgcaaaattcatgaa--aatttggccgattttttaaaatttaagaatgaatatgaggtattagtc 151  Q
    |||||||| ||||| | ||||||||| |||||||| | |  || ||||||||||||| |||||| ||| | |||| |||||||||||||    
T  34776657 aattcagggactaatttgatatttcgtaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 34776569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 151
Target Start/End: Original strand, 37345963 - 37346051
Alignment:
Q  65 aattcaggaactaaatagatatttcgcaaaattcatgaa--aatttggccgattttttaaaatttaagaatgaatatgaggtattagtc 151  Q
    |||||||| ||||| | |||||||||||||||||| | |  || |||| |||||||| |||||| ||| | |||| |||||||||||||    
T  37345963 aattcagggactaatttgatatttcgcaaaattcagggatgaaattggtcgatttttcaaaattcaaggacgaatttgaggtattagtc 37346051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 151
Target Start/End: Complemental strand, 46582098 - 46582010
Alignment:
Q  65 aattcaggaactaaatagatatttcgcaaaattcatgaa--aatttggccgattttttaaaatttaagaatgaatatgaggtattagtc 151  Q
    |||||||| ||||| | |||||||||||||||||| | |  || ||||||||||||| |||||| ||| |  ||| |||||||||||||    
T  46582098 aattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacaaatttgaggtattagtc 46582010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 77; Significance: 2e-35; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 12 - 153
Target Start/End: Complemental strand, 17574462 - 17574316
Alignment:
Q  12 tcatcaccactaacggggcttttggacggtgg-accattttgatggacgtctataa--ttcaggaactaaatagatatttcgcaaaattcatgaa--aat 106  Q
    |||||||||||||||| |||||||||||| || ||||||||||||||||||| |||  |||||| |||||||||||||||||||||||||| | |  |||    
T  17574462 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaat 17574363  T
Q  107 ttggccgattttttaaaatttaagaatgaatatgaggtattagtcaa 153  Q
    |||||||||||||||||||| ||| | |||| |||||||||||||||    
T  17574362 ttggccgattttttaaaattcaaggacgaatttgaggtattagtcaa 17574316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 12 - 151
Target Start/End: Complemental strand, 7267987 - 7267843
Alignment:
Q  12 tcatcaccactaacggggcttttggacggtgg-accattttgatggacgtctataa--ttcaggaactaaatagatatttcgcaaaattca-tga-aaat 106  Q
    |||||||||||||||| |||||||||||| || | ||||||||||||||||| |||  |||||| |||||||||||||||||||||||||| |||  |||    
T  7267987 tcatcaccactaacggagcttttggacggagggatcattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagtgacgaat 7267888  T
Q  107 ttggccgattttttaaaatttaagaatgaatatgaggtattagtc 151  Q
    |||| ||||||||||||||| ||| | |||| |||||||||||||    
T  7267887 ttggacgattttttaaaattcaaggacgaatttgaggtattagtc 7267843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 9 - 151
Target Start/End: Original strand, 36057590 - 36057737
Alignment:
Q  9 acatcatcaccactaacggggcttttggacggtgg-accattttgatggacgtctataa--ttcaggaactaaatagatatttcgcaaaattcatgaa-- 103  Q
    |||||||||||| |||||| |||||||||||| || ||||||||||||||||||| |||  ||||||  ||||||||||||||||||||||||| | |      
T  36057590 acatcatcaccattaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggtctaaatagatatttcgcaaaattcagggacg 36057689  T
Q  104 aatttggccgattttttaaaatttaagaatgaatatgaggtattagtc 151  Q
    |||||||||||||||| |||||| ||| | |||| |||||||||||||    
T  36057690 aatttggccgatttttgaaaattcaaggacgaatttgaggtattagtc 36057737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 9 - 151
Target Start/End: Complemental strand, 34327782 - 34327635
Alignment:
Q  9 acatcatcaccactaacggggcttttggacggtg-gaccattttgatggacgtctataa--ttcaggaactaaatagatatttcgcaaaattcatgaa-- 103  Q
    ||||||||||||||||| | |||||||||||| | |||||||||||||||||||| |||  |||||| ||||||||||||||||||||||||||   |      
T  34327782 acatcatcaccactaacagagcttttggacggagagaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagcgacg 34327683  T
Q  104 aatttggccgattttttaaaatttaagaatgaatatgaggtattagtc 151  Q
    ||||||||| |||||  |||||| ||| | |||| |||||||||||||    
T  34327682 aatttggccaattttagaaaattcaaggacgaatttgaggtattagtc 34327635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 65 - 153
Target Start/End: Original strand, 12738737 - 12738827
Alignment:
Q  65 aattcaggaactaaatagatatttcgcaaaattcatgaa--aatttggccgattttttaaaatttaagaatgaatatgaggtattagtcaa 153  Q
    |||||||| |||||||||||||||||||||||||| | |  ||||||||||||||||||||||| ||| | |||| |||||||||||||||    
T  12738737 aattcagggactaaatagatatttcgcaaaattcaggtacgaatttggccgattttttaaaattcaaggacgaatttgaggtattagtcaa 12738827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 65 - 153
Target Start/End: Original strand, 12801560 - 12801650
Alignment:
Q  65 aattcaggaactaaatagatatttcgcaaaattcatgaa--aatttggccgattttttaaaatttaagaatgaatatgaggtattagtcaa 153  Q
    |||||||| |||||||||||||||||||||||||| | |  ||||||||||||||||||||||| ||| | |||| |||||||||||||||    
T  12801560 aattcagggactaaatagatatttcgcaaaattcaggtacgaatttggccgattttttaaaattcaaggacgaatttgaggtattagtcaa 12801650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 12 - 151
Target Start/End: Complemental strand, 2179931 - 2179787
Alignment:
Q  12 tcatcaccactaacggggcttttggacggtgg-accattttgatggacgtctataa--ttcaggaactaaatagatatttcgcaaaattcatgaa--aat 106  Q
    ||||||||||||| || |||||||||||| || |||||||||||||| |||| |||  |||||| | |||||||||||||| ||||||||| | |  |||    
T  2179931 tcatcaccactaatggagcttttggacggagggaccattttgatggatgtctgtaaaattcagggattaaatagatatttcacaaaattcagggacgaat 2179832  T
Q  107 ttggccgattttttaaaatttaagaatgaatatgaggtattagtc 151  Q
    ||| |||||||||||||||| ||| |  ||| |||||||||||||    
T  2179831 ttgaccgattttttaaaattcaaggacaaatttgaggtattagtc 2179787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 12 - 97
Target Start/End: Original strand, 30468260 - 30468348
Alignment:
Q  12 tcatcaccactaacggggcttttggacgg-tggaccattttgatggacgtc--tataattcaggaactaaatagatatttcgcaaaatt 97  Q
    |||||||||||||||| ||||||||||||  ||||||||||||||||||||  || |||||| | ||||||||||||||||||||||||    
T  30468260 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcaaggactaaatagatatttcgcaaaatt 30468348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 13 - 157
Target Start/End: Complemental strand, 8539818 - 8539669
Alignment:
Q  13 catcaccactaacggggcttttggacggtg-gaccattttgatggacgtctataa--ttcaggaactaaatagatatttcgcaaaattcatgaa--aatt 107  Q
    ||||| ||||||||| ||||||||| || | ||| |||||||||||||| | |||  |||||| |||||||||||||||||||||||||| |||  ||||    
T  8539818 catcaacactaacggagcttttggatggagcgactattttgatggacgtttgtaaaattcagggactaaatagatatttcgcaaaattcaagaacgaatt 8539719  T
Q  108 tggccgattttttaaaatttaagaatgaatatgaggtattagtcaaattt 157  Q
    ||   ||||||| |||||| ||| | |||| |||||||||||||| ||||    
T  8539718 tgattgatttttcaaaattcaaggacgaatttgaggtattagtcatattt 8539669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 9 - 99
Target Start/End: Original strand, 18624985 - 18625078
Alignment:
Q  9 acatcatcaccactaacggggcttttggacggt-ggaccattttgatggacg--tctataattcaggaactaaatagatatttcgcaaaattca 99  Q
    |||||||||| |||||||| ||||||||||||  ||||||||||||||||||  | || |||||||| |||||||||||||||| |||||||||    
T  18624985 acatcatcactactaacggagcttttggacggaaggaccattttgatggacgagtgtaaaattcagggactaaatagatatttcacaaaattca 18625078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 65 - 151
Target Start/End: Complemental strand, 30463988 - 30463900
Alignment:
Q  65 aattcaggaactaaatagatatttcgcaaaattcatgaa--aatttggccgattttttaaaatttaagaatgaatatgaggtattagtc 151  Q
    |||||||| |||||||||||||||||||||||||| | |  |||||| |||||||||||||||| ||| | |||| |||||||||||||    
T  30463988 aattcagggactaaatagatatttcgcaaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttgaggtattagtc 30463900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 65 - 151
Target Start/End: Original strand, 8541272 - 8541360
Alignment:
Q  65 aattcaggaactaaatagatatttcgcaaaattcatgaa--aatttggccgattttttaaaatttaagaatgaatatgaggtattagtc 151  Q
    |||||| | |||||||||||||||||||||||||| | |  ||||||||||||||||||||||| ||  | |||| |||||||||||||    
T  8541272 aattcaaggactaaatagatatttcgcaaaattcagggacgaatttggccgattttttaaaattcaatgacgaatttgaggtattagtc 8541360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 65 - 151
Target Start/End: Complemental strand, 2852974 - 2852886
Alignment:
Q  65 aattcaggaactaaatagatatttcgcaaaattcatgaa--aatttggccgattttttaaaatttaagaatgaatatgaggtattagtc 151  Q
    |||||||||||||| | |||||||||||||||||| | |  || ||| |||||||||||||||| ||| | |||| |||||||||||||    
T  2852974 aattcaggaactaatttgatatttcgcaaaattcagggacgaaattgaccgattttttaaaattcaaggacgaatttgaggtattagtc 2852886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 65 - 153
Target Start/End: Original strand, 28813766 - 28813858
Alignment:
Q  65 aattcaggaactaaatagatatttcgcaaaattcatgaa--aatttggccga--ttttttaaaatttaagaatgaatatgaggtattagtcaa 153  Q
    |||||||| |||||||||||||||||||||||||| | |  ||||||||| |  |||||| ||||| ||| | |||| |||||||||||||||    
T  28813766 aattcagggactaaatagatatttcgcaaaattcaaggacgaatttggccaatttttttttaaattcaaggacgaatttgaggtattagtcaa 28813858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 65 - 151
Target Start/End: Original strand, 21842993 - 21843081
Alignment:
Q  65 aattcaggaactaaatagatatttcgcaaaattcatg--aaaatttggccgattttttaaaatttaagaatgaatatgaggtattagtc 151  Q
    |||||||| ||||| | ||||||||||||||||||||   ||| ||| ||||||||| |||||| ||| | |||| |||||||||||||    
T  21842993 aattcagggactaatttgatatttcgcaaaattcatggacaaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 21843081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 49 - 152
Target Start/End: Original strand, 24541230 - 24541337
Alignment:
Q  49 tttgatggacgtctataa--ttcaggaactaaatagatatttcgcaaaattcatgaa--aatttggccgattttttaaaatttaagaatgaatatgaggt 144  Q
    |||||||||||||| |||  |||||| ||||| | |||||||||||||||||| | |  || ||||||||||||| |||||| ||  | |||| ||||||    
T  24541230 tttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaatgacgaatttgaggt 24541329  T
Q  145 attagtca 152  Q
    ||||||||    
T  24541330 attagtca 24541337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 65 - 130
Target Start/End: Original strand, 43492134 - 43492201
Alignment:
Q  65 aattcaggaactaaatagatatttcgcaaaattcatgaa--aatttggccgattttttaaaatttaag 130  Q
    |||||||| |||||||||||||||||||||||||| | |  || ||||| ||||||| ||||||||||    
T  43492134 aattcagggactaaatagatatttcgcaaaattcagggatgaacttggctgatttttgaaaatttaag 43492201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 65 - 152
Target Start/End: Original strand, 7269447 - 7269536
Alignment:
Q  65 aattcaggaactaaatagatatttcgcaaaattcatgaa--aatttggccgattttttaaaatttaagaatgaatatgaggtattagtca 152  Q
    |||||||| ||||| | |||||||||||||||||| | |  || || ||||||||||||||||| ||  | |||| ||||||||||||||    
T  7269447 aattcagggactaatttgatatttcgcaaaattcagggacgaaattagccgattttttaaaattcaaagacgaatttgaggtattagtca 7269536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 42 - 97
Target Start/End: Complemental strand, 35395446 - 35395389
Alignment:
Q  42 ggaccattttgatggacgtctat--aattcaggaactaaatagatatttcgcaaaatt 97  Q
    ||||| ||||||||||||||||   |||||||||||||||| ||||||||||| ||||    
T  35395446 ggacctttttgatggacgtctaacaaattcaggaactaaattgatatttcgcataatt 35395389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 151
Target Start/End: Original strand, 34328840 - 34328916
Alignment:
Q  77 aaatagatatttcgcaaaattcatgaa--aatttggccgattttttaaaatttaagaatgaatatgaggtattagtc 151  Q
    |||||| ||||| |||||||||||| |  |||||| ||||||||| |||||| ||| | |||| |||||||||||||    
T  34328840 aaatagctattttgcaaaattcatggacgaatttgaccgatttttgaaaattcaaggacgaatttgaggtattagtc 34328916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 73; Significance: 4e-33; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 12 - 153
Target Start/End: Original strand, 34776895 - 34777041
Alignment:
Q  12 tcatcaccactaacggggcttttggacggtgg-accattttgatggacgtctataa--ttcaggaactaaatagatatttcgcaaaattcatgaa--aat 106  Q
    |||||| ||||||||| | |||||||||| || ||||||||||||||||||| |||  |||||| |||||||||||||||||||||||||| |||  |||    
T  34776895 tcatcatcactaacggagtttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcaggaatgaat 34776994  T
Q  107 ttggccgattttttaaaatttaagaatgaatatgaggtattagtcaa 153  Q
    |||||| ||||||||||||||||||| |||| |||||||||| ||||    
T  34776995 ttggccaattttttaaaatttaagaacgaatttgaggtattaatcaa 34777041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 12 - 151
Target Start/End: Original strand, 39859209 - 39859353
Alignment:
Q  12 tcatcaccactaacggggcttttggacggtgg-accattttgatggacgtctataa--ttcaggaactaaatagatatttcgcaaaattcatgaa--aat 106  Q
    |||||||||||||||| |||||||||||| || |||||||||| |||||||| |||  |||| | |||||||||||||||||||||||||| | |  |||    
T  39859209 tcatcaccactaacggagcttttggacggagggaccattttgacggacgtctgtaaaattcaaggactaaatagatatttcgcaaaattcagggactaat 39859308  T
Q  107 ttggccgattttttaaaatttaagaatgaatatgaggtattagtc 151  Q
    |||||||||||||||||||| ||| | |||| |||||||||||||    
T  39859309 ttggccgattttttaaaattcaaggacgaatttgaggtattagtc 39859353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 12 - 126
Target Start/End: Complemental strand, 13168267 - 13168145
Alignment:
Q  12 tcatcaccactaacggggcttttggacgg-tggaccattttgatggacgtctataa--ttcagga---actaaatagatatttcgcaaaattcatgaa-- 103  Q
    |||||||||||||||| |||||||||||| |||||||||||||||||||||| |||  |||||||   |||||||||||||||||||||||||| | |      
T  13168267 tcatcaccactaacggagcttttggacggatggaccattttgatggacgtctgtaaaattcaggagggactaaatagatatttcgcaaaattcaaggacg 13168168  T
Q  104 aatttggccgattttttaaaatt 126  Q
    |||||||||||||||||||||||    
T  13168167 aatttggccgattttttaaaatt 13168145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 9 - 151
Target Start/End: Original strand, 37115503 - 37115650
Alignment:
Q  9 acatcatcaccactaacggggcttttggacgg-tggaccattttgatggacgtc--tataattcaggaactaaatagatatttcgcaaaattcatgaa-- 103  Q
    ||||||||||||||||||| ||||||||||||  |||| |||||||||||||||  || |||||||| ||||||||||||||| |||||||||| |||      
T  37115503 acatcatcaccactaacggagcttttggacggagggactattttgatggacgtctgtaaaattcaggtactaaatagatattttgcaaaattcaggaacg 37115602  T
Q  104 aatttggccgattttttaaaatttaagaatgaatatgaggtattagtc 151  Q
    |||||| | |||||||||||||| ||  | |||| |||||||||||||    
T  37115603 aatttgactgattttttaaaattcaatgacgaatttgaggtattagtc 37115650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 12 - 151
Target Start/End: Complemental strand, 6602479 - 6602335
Alignment:
Q  12 tcatcaccactaacggggcttttggacggtgg-accattttgatggacgtctataa--ttcaggaactaaatagatatttcgcaaaattcatg--aaaat 106  Q
    |||||||||||||||| |||||||||||| || ||||||||||||||||||| |||  |||||| |||||||||||||||||||||||||| |   || |    
T  6602479 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggataagt 6602380  T
Q  107 ttggccgattttttaaaatttaagaatgaatatgaggtattagtc 151  Q
    || ||||||||||||||||| |||   |||| |||| ||||||||    
T  6602379 ttagccgattttttaaaattcaaggtcgaatttgagttattagtc 6602335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 9 - 148
Target Start/End: Original strand, 24228386 - 24228530
Alignment:
Q  9 acatcatcaccactaacggggcttttggacggtgg-accattttgatggacgtctataa--ttcaggaactaaatagatatttcgcaaaattcatgaa-- 103  Q
    |||||||||||||||| || |||||||||||  || ||||||||||||||||||| |||  |||||  |||||||||||||||||||||||||| | |      
T  24228386 acatcatcaccactaatggagcttttggacgaagggaccattttgatggacgtctgtaaaattcagagactaaatagatatttcgcaaaattcagggacg 24228485  T
Q  104 aatttggccgattttttaaaatttaagaatgaatatgaggtatta 148  Q
    ||||||||| ||||||||||||| ||||| |||  ||||||||||    
T  24228486 aatttggccaattttttaaaattcaagaacgaaattgaggtatta 24228530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 9 - 152
Target Start/End: Original strand, 47386186 - 47386334
Alignment:
Q  9 acatcatcaccactaacggggcttttggacgg-tggaccattttgatggacgtc--tataattcaggaactaaatagatatttcgcaaaattcatgaa-- 103  Q
    ||||||||||||||||||| ||||||||||||   |||||||||||||||||||  || |||| ||  |||||||| ||||||||||||||||| | |      
T  47386186 acatcatcaccactaacggagcttttggacggaatgaccattttgatggacgtctgtaaaatttagagactaaataaatatttcgcaaaattcaaggacg 47386285  T
Q  104 aatttggccgattttttaaaatttaagaatgaatatgaggtattagtca 152  Q
    |||||| | |||||||||||||| ||| | |||| ||||||||||||||    
T  47386286 aatttgactgattttttaaaattaaaggacgaatttgaggtattagtca 47386334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 9 - 151
Target Start/End: Original strand, 30940402 - 30940549
Alignment:
Q  9 acatcatcaccactaacggggcttttggacggtg-gaccattttgatggacg--tctataattcaggaactaaatagatatttcgcaaaattcatgaa-- 103  Q
    ||||||||||||||||||| |||||||||||| | ||||||||||||| |||  | || |||||||| ||||||||||||||||| |||||| |   |      
T  30940402 acatcatcaccactaacggagcttttggacggagagaccattttgatgaacgtttgtaaaattcagggactaaatagatatttcgtaaaattaagagacg 30940501  T
Q  104 aatttggccgattttttaaaatttaagaatgaatatgaggtattagtc 151  Q
    ||||||||||||||||||||||| |||||  ||| | |||||||||||    
T  30940502 aatttggccgattttttaaaattcaagaacaaatttaaggtattagtc 30940549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 9 - 151
Target Start/End: Original strand, 38474120 - 38474267
Alignment:
Q  9 acatcatcaccactaacggggcttttggacgg-tggaccattttgatggacgtc--tataattcaggaactaaatagatatttcgcaaaattcatgaa-- 103  Q
    ||||||||||||||||||| |||||||||||| |||||||||||||| | ||||  || |||||| | |||||||||||||||||||||||||| | |      
T  38474120 acatcatcaccactaacggagcttttggacggatggaccattttgataggcgtctgtaaaattcaaggactaaatagatatttcgcaaaattcagggacg 38474219  T
Q  104 aatttggccgattttttaaaatttaagaatgaatatgaggtattagtc 151  Q
    |||||| ||||||||| ||||||  || |  ||| |||||||||||||    
T  38474220 aatttgaccgatttttaaaaattcgaggactaatttgaggtattagtc 38474267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 12 - 126
Target Start/End: Complemental strand, 45359480 - 45359361
Alignment:
Q  12 tcatcaccactaacggggcttttggacggtgg-accattttgatggacgtctataa--ttcaggaactaaatagatatttcgcaaaattcatgaa--aat 106  Q
    |||||||||||||||| ||||||||| || || ||||||||||||||||||| |||  |||| | |||||||||||||||||||||||||| | |   ||    
T  45359480 tcatcaccactaacggagcttttggatggagggaccattttgatggacgtctgtaaaattcaaggactaaatagatatttcgcaaaattcaaggacggat 45359381  T
Q  107 ttggccgattttttaaaatt 126  Q
    ||| ||||||||||||||||    
T  45359380 ttgaccgattttttaaaatt 45359361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 65 - 152
Target Start/End: Original strand, 13169684 - 13169773
Alignment:
Q  65 aattcaggaactaaatagatatttcgcaaaattcatg--aaaatttggccgattttttaaaatttaagaatgaatatgaggtattagtca 152  Q
    |||||||| |||||||||||||||||||||||||| |   ||||||||||||||||| |||||| ||| | |||| ||||||||||||||    
T  13169684 aattcagggactaaatagatatttcgcaaaattcagggacaaatttggccgatttttgaaaattcaaggacgaatttgaggtattagtca 13169773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 65 - 158
Target Start/End: Original strand, 35403620 - 35403715
Alignment:
Q  65 aattcaggaactaaatagatatttcgcaaaattcatgaa--aatttggccgattttttaaaatttaagaatgaatatgaggtattagtcaaattta 158  Q
    |||||||| ||||| | |||||||||||||||||| | |  || |||||||||||||||||||| ||| | |||| ||||||||||||||||||||    
T  35403620 aattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgattttttaaaattcaaggacgaatttgaggtattagtcaaattta 35403715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 65 - 153
Target Start/End: Original strand, 6605398 - 6605488
Alignment:
Q  65 aattcaggaactaaatagatatttcgcaaaattcatga--aaatttggccgattttttaaaatttaagaatgaatatgaggtattagtcaa 153  Q
    |||||||| ||||||||| |||||||||||||||| ||  ||||||| |||||||||||||||| ||| |  ||| |||||||||| ||||    
T  6605398 aattcagggactaaatagctatttcgcaaaattcaggaacaaatttgaccgattttttaaaattcaaggacaaatttgaggtattaatcaa 6605488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 9 - 153
Target Start/End: Original strand, 27666042 - 27666191
Alignment:
Q  9 acatcatcaccactaacggggcttttggacgg-tggaccattttgatggacg--tctataattcaggaactaaatagatatttcgcaaaattcatgaa-- 103  Q
    |||||||||| | ||||||| |||||||||||  ||||   |||||||||||  | || |||||||| ||||| | |||||||||||||||||| | |      
T  27666042 acatcatcactattaacgggccttttggacggagggacggatttgatggacgtttgtaaaattcagggactaatttgatatttcgcaaaattcagggacg 27666141  T
Q  104 aatttggccgattttttaaaatttaagaatgaatatgaggtattagtcaa 153  Q
    || ||||||||||||| |||||| ||| | |||| |||||||||||||||    
T  27666142 aaattggccgatttttcaaaattcaaggacgaatttgaggtattagtcaa 27666191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 65 - 153
Target Start/End: Complemental strand, 39857733 - 39857643
Alignment:
Q  65 aattcaggaactaaatagatatttcgcaaaattcatgaa--aatttggccgattttttaaaatttaagaatgaatatgaggtattagtcaa 153  Q
    ||||| || |||||||||||||||||||||||||| | |  |||||| |||||||||||||||| ||| | |||| |||||||||| ||||    
T  39857733 aattctgggactaaatagatatttcgcaaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttgaggtattaatcaa 39857643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 65 - 151
Target Start/End: Complemental strand, 34775086 - 34774998
Alignment:
Q  65 aattcaggaactaaatagatatttcgcaaaattcatgaa--aatttggccgattttttaaaatttaagaatgaatatgaggtattagtc 151  Q
    |||||||| ||||||||| ||||| ||||||||||||||  |||||| |||||||||||||||| ||  | |||| |||| ||||||||    
T  34775086 aattcagggactaaatagctattttgcaaaattcatgaatgaatttgaccgattttttaaaattcaaagacgaatttgagatattagtc 34774998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 65 - 151
Target Start/End: Complemental strand, 37114029 - 37113941
Alignment:
Q  65 aattcaggaactaaatagatatttcgcaaaattcatgaa--aatttggccgattttttaaaatttaagaatgaatatgaggtattagtc 151  Q
    |||| ||| |||||||||||||||||||||||||| | |  |||||| || ||||||||||||| ||| | |||| |||||||||||||    
T  37114029 aatttagggactaaatagatatttcgcaaaattcagggatgaatttgaccaattttttaaaattcaaggacgaatttgaggtattagtc 37113941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 97
Target Start/End: Original strand, 37796170 - 37796249
Alignment:
Q  21 ctaacggggcttttggacggtgg-accattttgatggacgtc--tataattcaggaactaaatagatatttcgcaaaatt 97  Q
    ||||||| |||| ||||||| || || |||||||||||||||  || |||||||| ||||||||||||||||||||||||    
T  37796170 ctaacggagcttatggacggagggactattttgatggacgtccgtaaaattcagggactaaatagatatttcgcaaaatt 37796249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 97
Target Start/End: Original strand, 48852324 - 48852415
Alignment:
Q  9 acatcatcaccactaacggggcttttggacggtg-gaccattttgatggacgtc--tataattcaggaactaaatagatatttcgcaaaatt 97  Q
    ||||||||||||||||| | |||||||||| | | |||||||||||||||||||  || |||||| | | ||||||||||||| ||||||||    
T  48852324 acatcatcaccactaacagagcttttggaccgagagaccattttgatggacgtctgtaaaattcaaggattaaatagatattttgcaaaatt 48852415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 77 - 150
Target Start/End: Complemental strand, 24226657 - 24226582
Alignment:
Q  77 aaatagatatttcgcaaaattcatgaa--aatttggccgattttttaaaatttaagaatgaatatgaggtattagt 150  Q
    |||||| |||||||||||||||| | |  |||||||||||||||| |||||| ||| | |||| ||||||||||||    
T  24226657 aaatagctatttcgcaaaattcaaggacgaatttggccgatttttgaaaattcaaggacgaatttgaggtattagt 24226582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 50 - 151
Target Start/End: Complemental strand, 56435 - 56330
Alignment:
Q  50 ttgatggacgtctataa--ttcaggaactaaatagatatttcgcaaaattcatgaa--aatttggccgattttttaaaatttaagaatgaatatgaggta 145  Q
    ||||||||||||| |||  |||||| ||||| | |||||||||||||||||| | |  || || |||||||||| |||||| ||| | |||| |||||||    
T  56435 ttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggta 56336  T
Q  146 ttagtc 151  Q
    ||||||    
T  56335 ttagtc 56330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 153
Target Start/End: Original strand, 22155848 - 22155938
Alignment:
Q  65 aattcaggaactaaatagatatttcgcaaaattcatgaa--aatttggccgattttttaaaatttaagaatgaatatgaggtattagtcaa 153  Q
    |||||||| || |||||| ||||| |||||||||||| |  |||||||||||||||| |||||| ||| | |||  | |||||||||||||    
T  22155848 aattcagggacaaaatagctattttgcaaaattcatggacgaatttggccgatttttgaaaattcaaggacgaagtttaggtattagtcaa 22155938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 153
Target Start/End: Original strand, 22211763 - 22211853
Alignment:
Q  65 aattcaggaactaaatagatatttcgcaaaattcatgaa--aatttggccgattttttaaaatttaagaatgaatatgaggtattagtcaa 153  Q
    |||||||| || |||||| ||||| |||||||||||| |  |||||||||||||||| |||||| ||| | |||  | |||||||||||||    
T  22211763 aattcagggacaaaatagctattttgcaaaattcatggacgaatttggccgatttttgaaaattcaaggacgaagtttaggtattagtcaa 22211853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 104 - 151
Target Start/End: Original strand, 23906309 - 23906356
Alignment:
Q  104 aatttggccgattttttaaaatttaagaatgaatatgaggtattagtc 151  Q
    ||||||||||||||||||||||| ||| | |||| |||||||||||||    
T  23906309 aatttggccgattttttaaaattcaaggaggaatttgaggtattagtc 23906356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 99
Target Start/End: Original strand, 35693347 - 35693442
Alignment:
Q  9 acatcatcaccactaacggggcttttggacggtgg-accattttgatggacgtc--tataattcaggaactaa--atagatatttcgcaaaattca 99  Q
    ||||||||||||||||| |  |||||||| || || ||||||||||||||||||  || |||||||| |||||  | ||||||| |||||||||||    
T  35693347 acatcatcaccactaacagaacttttggatggagggaccattttgatggacgtctgtaaaattcagggactaattagagatattccgcaaaattca 35693442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 151
Target Start/End: Complemental strand, 47384382 - 47384294
Alignment:
Q  65 aattcaggaactaaatagatatttcgcaaaattcatgaa--aatttggccgattttttaaaatttaagaatgaatatgaggtattagtc 151  Q
    ||||| || ||||| |||||||||||||||||||| | |  ||||||||  |||||| |||||| ||| | |||| |||||||||||||    
T  47384382 aattcggggactaattagatatttcgcaaaattcaaggacgaatttggctcatttttcaaaattcaaggacgaatttgaggtattagtc 47384294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 104 - 148
Target Start/End: Complemental strand, 13018080 - 13018036
Alignment:
Q  104 aatttggccgattttttaaaatttaagaatgaatatgaggtatta 148  Q
    |||||||| |||||||||||||| ||| |||||| ||||||||||    
T  13018080 aatttggctgattttttaaaattcaaggatgaatttgaggtatta 13018036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 49 - 151
Target Start/End: Original strand, 29996532 - 29996638
Alignment:
Q  49 tttgatggacgtctataa--ttcaggaactaaatagatatttcgcaaaattcatgaa--aatttggccgattttttaaaatttaagaatgaatatgaggt 144  Q
    |||||||||||||| |||  |||||| | ||| | |||||||||||||||||| | |  || ||| ||||||||| |||||| ||| | |||| ||||||    
T  29996532 tttgatggacgtctgtaaaattcagggattaatttgatatttcgcaaaattcagggacaaaattgaccgatttttcaaaattcaaggacgaatttgaggt 29996631  T
Q  145 attagtc 151  Q
    |||||||    
T  29996632 attagtc 29996638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 71; Significance: 7e-32; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 9 - 152
Target Start/End: Original strand, 39664745 - 39664893
Alignment:
Q  9 acatcatcaccactaacggggcttttggacgg-tggaccattttgatggacgtc--tataattcaggaactaaatagatatttcgcaaaattcatgaa-- 103  Q
    ||||||||||||||||||| ||||||||||||  ||||||||||||||||||||  || |||||||| ||||||||||||||||| |||||||  | |      
T  39664745 acatcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgtaaaattcggggacg 39664844  T
Q  104 aatttggccgattttttaaaatttaagaatgaatatgaggtattagtca 152  Q
    ||||||||||||||||||||||| ||| | |||| ||||||||||||||    
T  39664845 aatttggccgattttttaaaattcaaggacgaatttgaggtattagtca 39664893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 11 - 153
Target Start/End: Original strand, 44709744 - 44709891
Alignment:
Q  11 atcatcaccactaacggggcttttggacggtgg-accattttgatggacgtctataa--ttcaggaactaaatagatatttcgcaaaattcatg--aaaa 105  Q
    ||||||||||||||||  |||||||||||| || ||||||||||||||||||| |||  |||||| ||||||||| |||||||||||||||| |    ||    
T  44709744 atcatcaccactaacgaagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagttatttcgcaaaattcagggccgaa 44709843  T
Q  106 tttggccgattttttaaaatttaagaatgaatatgaggtattagtcaa 153  Q
    |||||||| |||||||||||| ||| | |||| |||||||||||||||    
T  44709844 tttggccggttttttaaaattcaaggacgaatttgaggtattagtcaa 44709891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 12 - 151
Target Start/End: Original strand, 19908246 - 19908391
Alignment:
Q  12 tcatcaccactaacggggcttttggacggtgg-accattttgatggacgtctataa--ttcaggaactaaatagatatttcgcaaaattcatgaa--aat 106  Q
    |||||||||||||||| |||||||||||| || |||||||||| |||||||| |||  |||| | |||||||||||||||||||||||||| | |  |||    
T  19908246 tcatcaccactaacggagcttttggacggagggaccattttgacggacgtctgtaaaattcaaggactaaatagatatttcgcaaaattcagggactaat 19908345  T
Q  107 ttggccga-ttttttaaaatttaagaatgaatatgaggtattagtc 151  Q
    |||||||| |||||||||||| ||| | |||| |||||||||||||    
T  19908346 ttggccgatttttttaaaattcaaggacgaatttgaggtattagtc 19908391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 12 - 152
Target Start/End: Complemental strand, 16763220 - 16763075
Alignment:
Q  12 tcatcaccactaacggggcttttggacggtgg-accattttgatggacgtctataa--ttcaggaactaaatagatatttcgcaaaattcatgaa--aat 106  Q
    ||||| |||||||| | | |||||||||| || ||||||||||||||||||| |||  |||||| |||||||||||||||||||||||||| | |  |||    
T  16763220 tcatcgccactaacagagattttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaat 16763121  T
Q  107 ttggccgattttttaaaatttaagaatgaatatgaggtattagtca 152  Q
    ||| ||||||||| |||||| ||| | |||| ||||||||||||||    
T  16763120 ttgaccgatttttaaaaattcaaggacgaatttgaggtattagtca 16763075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 9 - 157
Target Start/End: Complemental strand, 17696353 - 17696200
Alignment:
Q  9 acatcatcaccactaacggggcttttggacggtg-gaccattttgatggacg--tctataattcaggaactaaatagatatttcgcaaaattcatgaa-- 103  Q
    ||||||||||||||||||| |||||||||||| | |||||||||||| ||||  | || |||||||| |||||||||||||||  ||||||||| | |      
T  17696353 acatcatcaccactaacggagcttttggacggagtgaccattttgattgacgtttgtaaaattcagggactaaatagatattttccaaaattcagggatg 17696254  T
Q  104 aatttggccgattttttaaaatttaagaatgaatatgaggtattagtcaaattt 157  Q
    |||||||||||||||| |||||| ||| | |||| |||||||||| || |||||    
T  17696253 aatttggccgatttttgaaaattcaaggacgaatttgaggtattaatctaattt 17696200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 9 - 153
Target Start/End: Complemental strand, 40560370 - 40560221
Alignment:
Q  9 acatcatcaccactaacggggcttttggacggtgg-accattttgatggacgtctataa--ttcaggaactaaatagatatttcgcaaaattcatgaa-- 103  Q
    ||||||||||||||||| |  ||||||||||| || || |||||||||||||||| |||  |||||| |||||||||||||||||||||||||| | |      
T  40560370 acatcatcaccactaacagaacttttggacggagggactattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacg 40560271  T
Q  104 aatttggccgattttttaaaatttaagaatgaatatgaggtattagtcaa 153  Q
    |||||||| |||||||||||||| ||  | |||| ||| |||||||||||    
T  40560270 aatttggctgattttttaaaattcaaagacgaatttgaagtattagtcaa 40560221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 9 - 152
Target Start/End: Complemental strand, 2767081 - 2766933
Alignment:
Q  9 acatcatcaccactaacggggcttttggacggtgg-accattttgatggacgtctataa--ttcaggaactaaatagatatttcgcaaaattcatgaa-- 103  Q
    ||||||||||||||||||| |||||||||| | || ||||||||||| ||||||| |||  |||||| |||||||||||||||||||||||||| | |      
T  2767081 acatcatcaccactaacggagcttttggacagagggaccattttgatagacgtctgtaaaattcagggactaaatagatatttcgcaaaattcaaggacg 2766982  T
Q  104 aatttggccgattttttaaaatttaagaatgaatatgaggtattagtca 152  Q
    | |||| ||||||||| |||||| ||| | |||| |||| |||||||||    
T  2766981 agtttgaccgatttttaaaaattcaaggacgaatttgagctattagtca 2766933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 9 - 157
Target Start/End: Original strand, 14389081 - 14389234
Alignment:
Q  9 acatcatcaccactaacggggcttttggacggtgg-accattttgatggacgtct--ataattcaggaactaaatagatatttcgcaaaattcatgaa-- 103  Q
    |||||||||| |||||||   ||||||||||| || ||||||||||||||| | |  | |||||||| |||||||||||||||||||||||||| | |      
T  14389081 acatcatcactactaacgaaacttttggacggagggaccattttgatggacatttggaaaattcagggactaaatagatatttcgcaaaattcagggacg 14389180  T
Q  104 aatttggccgattttttaaaatttaagaatgaatatgaggtattagtcaaattt 157  Q
    |||||||||||||||| |||||| ||  | |||| |||||||||||||| ||||    
T  14389181 aatttggccgatttttgaaaattcaatgacgaatttgaggtattagtcatattt 14389234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 9 - 151
Target Start/End: Complemental strand, 6797654 - 6797507
Alignment:
Q  9 acatcatcaccactaacggggcttttggacggtgga-ccattttgatggacgtctataa--ttcaggaactaaatagatatttcgcaaaattcatgaa-- 103  Q
    |||||||||||  |||| | |||||||||||| ||| |||||||||| ||||||| |||  || ||| |||||||||||||||||||||||||| |||      
T  6797654 acatcatcacccgtaacagagcttttggacggaggaaccattttgatagacgtctgtaaaattaagggactaaatagatatttcgcaaaattcaggaacg 6797555  T
Q  104 aatttggccgattttttaaaatttaagaatgaatatgaggtattagtc 151  Q
    ||||| ||| ||||||||||||| ||  |||||| | |||||||||||    
T  6797554 aatttagccaattttttaaaattcaaatatgaatttaaggtattagtc 6797507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 9 - 152
Target Start/End: Complemental strand, 39455316 - 39455168
Alignment:
Q  9 acatcatcaccactaacggggcttttggacggtg-gaccattttgatggacgtctataa--ttcaggaactaaatagatatttcgcaaaattcatga--a 103  Q
    |||||||| |||||||||| ||||||| |||| | |||||||||||||||||||| |||  |||| | ||||||||||||||| |||||||||| ||       
T  39455316 acatcatcgccactaacggagcttttgaacggagagaccattttgatggacgtctgtaaaattcatggactaaatagatattttgcaaaattcaggactg 39455217  T
Q  104 aatttggccgattttttaaaatttaagaatgaatatgaggtattagtca 152  Q
    |||||  |||||||||||||||| ||| |  ||| |||| |||||||||    
T  39455216 aatttaaccgattttttaaaattcaaggacaaatttgagatattagtca 39455168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 9 - 147
Target Start/End: Original strand, 42519202 - 42519346
Alignment:
Q  9 acatcatcaccactaacggggcttttggacggtgg-accattttgatggacgtctataa--ttcaggaactaaatagatatttcgcaaaa-ttcatgaa- 103  Q
    ||||||||||||||||||| ||||||||| || || ||||||||||||||||||| |||  |||||| ||||||||||||||| |||||| |||| | |     
T  42519202 acatcatcaccactaacggagcttttggatggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaaattcaaggac 42519301  T
Q  104 -aatttggccgattttttaaaatttaagaatgaatatgaggtatt 147  Q
     ||||||  | ||||||||||||| ||| | |||| |||||||||    
T  42519302 taatttgatcaattttttaaaattcaaggacgaatttgaggtatt 42519346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 12 - 99
Target Start/End: Original strand, 16377197 - 16377287
Alignment:
Q  12 tcatcaccactaacggggcttttggacgg-tggaccattttgatggacg--tctataattcaggaactaaatagatatttcgcaaaattca 99  Q
    |||||||||||||||| ||||||||||||  ||||||||||||||||||  | || |||||| | ||||||||||||||| ||||||||||    
T  16377197 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtatgtaaaattcaaggactaaatagatattttgcaaaattca 16377287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 74 - 151
Target Start/End: Complemental strand, 19581493 - 19581414
Alignment:
Q  74 actaaatagatatttcgcaaaattcatgaa--aatttggccgattttttaaaatttaagaatgaatatgaggtattagtc 151  Q
    |||||||||||||||||||||||||| | |  |||||||| ||||||| |||||||||| | |||| |||||||||||||    
T  19581493 actaaatagatatttcgcaaaattcagggacaaatttggctgatttttaaaaatttaaggacgaatttgaggtattagtc 19581414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 77 - 151
Target Start/End: Complemental strand, 34400390 - 34400314
Alignment:
Q  77 aaatagatatttcgcaaaattcatgaa--aatttggccgattttttaaaatttaagaatgaatatgaggtattagtc 151  Q
    |||||| |||||||||||||||| | |  |||||||||||||||| |||||| ||| |||||| |||||||||||||    
T  34400390 aaatagctatttcgcaaaattcagggatgaatttggccgatttttgaaaattcaaggatgaatttgaggtattagtc 34400314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 65 - 154
Target Start/End: Complemental strand, 16376824 - 16376733
Alignment:
Q  65 aattcaggaactaaatagatatttcgcaaaattcatgaa--aatttggccgattttttaaaatttaagaatgaatatgaggtattagtcaaa 154  Q
    |||||||| ||||||||| ||||||| |||||||| | |  |||||| |||||||||||||||| ||  | |||| ||||||||||||||||    
T  16376824 aattcagggactaaatagctatttcgtaaaattcagggacgaatttgaccgattttttaaaattcaaagacgaatttgaggtattagtcaaa 16376733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 74 - 148
Target Start/End: Complemental strand, 19906761 - 19906685
Alignment:
Q  74 actaaatagatatttcgcaaaattcatgaa--aatttggccgattttttaaaatttaagaatgaatatgaggtatta 148  Q
    |||||||||||||||||||||||||| | |  |||||| |||||||||||||||| ||| | |||| | ||||||||    
T  19906761 actaaatagatatttcgcaaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttaaggtatta 19906685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 65 - 151
Target Start/End: Original strand, 39456781 - 39456869
Alignment:
Q  65 aattcaggaactaaatagatatttcgcaaaattcatgaa--aatttggccgattttttaaaatttaagaatgaatatgaggtattagtc 151  Q
    |||||||| ||||||||| ||||| |||||||||||| |  |||||  || ||||||||||||| ||| |||||| ||| |||||||||    
T  39456781 aattcagggactaaatagctattttgcaaaattcatggacgaatttaaccaattttttaaaattcaaggatgaatttgaagtattagtc 39456869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 153
Target Start/End: Original strand, 16764612 - 16764702
Alignment:
Q  65 aattcaggaactaaatagatatttcgcaaaattcatgaa--aatttggccgattttttaaaatttaagaatgaatatgaggtattagtcaa 153  Q
    |||||||| ||||| | |||||||||||||||||| | |  || ||||||||||| | |||||| ||| | |||| |||||||||||||||    
T  16764612 aattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttctcaaaattcaaggacgaatttgaggtattagtcaa 16764702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 151
Target Start/End: Complemental strand, 14387437 - 14387349
Alignment:
Q  65 aattcaggaactaaatagatatttcgcaaaattcatgaa--aatttggccgattttttaaaatttaagaatgaatatgaggtattagtc 151  Q
    |||||||| ||||| | ||||||||| |||||||| | |  || ||||||||||||| |||||| ||| | |||| |||||||||||||    
T  14387437 aattcagggactaatttgatatttcgtaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 14387349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 151
Target Start/End: Complemental strand, 39663242 - 39663154
Alignment:
Q  65 aattcaggaactaaatagatatttcgcaaaattcatgaa--aatttggccgattttttaaaatttaagaatgaatatgaggtattagtc 151  Q
    |||||||| ||||||||| ||||| |||||||||| | |  |||||| ||||||||| |||||| ||| | |||| | |||||||||||    
T  39663242 aattcagggactaaatagctattttgcaaaattcagggacgaatttgaccgatttttaaaaattcaaggacgaattttaggtattagtc 39663154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0564 (Bit Score: 70; Significance: 3e-31; HSPs: 1)
Name: scaffold0564
Description:

Target: scaffold0564; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 12 - 149
Target Start/End: Complemental strand, 8404 - 8264
Alignment:
Q  12 tcatcaccactaacggggcttttggacgg-tggaccattttgatggacgtctataattcaggaactaaatagatatttcgcaaaattcatgaa--aattt 108  Q
    |||||||||||||||  |||||||||||| || ||||||||||||||||| || |||||||| ||||||||||||||| |||||||||| |||  |||||    
T  8404 tcatcaccactaacgaagcttttggacggatgtaccattttgatggacgtataaaattcagggactaaatagatattttgcaaaattcaagaacgaattt 8305  T
Q  109 ggccgattttttaaaatttaagaatgaatatgaggtattag 149  Q
    |||| ||||||||||||| ||| | |||| |||||||||||    
T  8304 ggccaattttttaaaattcaaggacgaatttgaggtattag 8264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 63; Significance: 4e-27; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 12 - 151
Target Start/End: Original strand, 35404425 - 35404569
Alignment:
Q  12 tcatcaccactaacggggcttttggacgg-tggaccattttgatggacgtctataa--ttcaggaactaaatagatatttcgcaaaattcatgaa--aat 106  Q
    |||||||||||||||| |||||||||||| |||||||||||| ||||||||| |||  |||||| | |||||| ||||||||||||||| | | |  |||    
T  35404425 tcatcaccactaacggagcttttggacggatggaccattttgttggacgtctgtaaaattcagggattaaataaatatttcgcaaaattgaaggacgaat 35404524  T
Q  107 ttggccgattttttaaaatttaagaatgaatatgaggtattagtc 151  Q
    || ||||||||||||||||| ||| |||||| |||||||||||||    
T  35404525 ttagccgattttttaaaattcaagtatgaatctgaggtattagtc 35404569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 9 - 150
Target Start/End: Complemental strand, 49523271 - 49523125
Alignment:
Q  9 acatcatcaccactaacggggcttttggacggtgg-accattttgatggacgtctataa--ttcaggaactaaatagatatttcgcaaaattcatgaa-- 103  Q
    |||||||||||||||||||   |||||||||| || |||||||||||| |||||| |||  |||||| |||||||||||||||||||||||||||| |      
T  49523271 acatcatcaccactaacggattttttggacggagggaccattttgatgaacgtctgtaaaattcagggactaaatagatatttcgcaaaattcatggacg 49523172  T
Q  104 aatttggccgattttttaaaatttaagaatgaatatgaggtattagt 150  Q
    ||||| ||||||||||||||||| ||  | |||| ||||||||||||    
T  49523171 aatttagccgattttttaaaattcaatgacgaatttgaggtattagt 49523125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 9 - 148
Target Start/End: Original strand, 41761723 - 41761867
Alignment:
Q  9 acatcatcaccactaacggggcttttggacggtgg-accattttgatggacgtctataa--ttcaggaactaaatagatatttcgcaaaattcatgaa-- 103  Q
    ||||||||||||||||||  |||||||||||| || ||||||||||||||||||| |||  |||||| ||||||||||||||||||||||||   | |      
T  41761723 acatcatcaccactaacgaagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaatttcgggacg 41761822  T
Q  104 aatttggccgattttttaaaatttaagaatgaatatgaggtatta 148  Q
    |||||||||||||||| |||||| ||| | |||| ||||||||||    
T  41761823 aatttggccgatttttgaaaattcaaggacgaatttgaggtatta 41761867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 9 - 152
Target Start/End: Complemental strand, 41781686 - 41781538
Alignment:
Q  9 acatcatcaccactaacggggcttttggacggtgg-accattttgatggacgtctataa--ttcaggaactaaatagatatttcgcaaaattcatgaa-- 103  Q
    ||||||||| ||||||||| |||||||||||| || |||||||||||||| |||| |||  |||||| |||||||| |||||| |||||||||| | |      
T  41781686 acatcatcatcactaacggagcttttggacggagggaccattttgatggatgtctgtaaaattcagggactaaataaatattttgcaaaattcagggaca 41781587  T
Q  104 aatttggccgattttttaaaatttaagaatgaatatgaggtattagtca 152  Q
    |||||| |||||||||||||||| |||||  ||| ||||||||||||||    
T  41781586 aatttgaccgattttttaaaattcaagaacaaatttgaggtattagtca 41781538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 12 - 151
Target Start/End: Complemental strand, 51012070 - 51011926
Alignment:
Q  12 tcatcaccactaacggggcttttggacggtgg-accattttgatggacgtctataa--ttcaggaactaaatagatatttcgcaaaattcatgaa--aat 106  Q
    ||||||| |||||| | |||||||||||| || ||||||||||||||||||| |||  |||||  |||||||||||||||||||||||||| |||  |||    
T  51012070 tcatcactactaacagagcttttggacggagggaccattttgatggacgtctgtaaaattcagagactaaatagatatttcgcaaaattcaagaaagaat 51011971  T
Q  107 ttggccgattttttaaaatttaagaatgaatatgaggtattagtc 151  Q
    ||| |||||||||||||||| ||| | |||| |||| ||||||||    
T  51011970 ttgaccgattttttaaaattcaaggacgaatttgagatattagtc 51011926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 9 - 151
Target Start/End: Complemental strand, 48813934 - 48813787
Alignment:
Q  9 acatcatcaccactaacggggcttttggacggtgg-accattttgatggacgtctataa--ttcaggaactaaatagatatttcgcaaaattcatg--aa 103  Q
    ||||||||||||| ||| | |||||||||||  || |||||||||||||||||||||||  ||||||||||||||| |||||| |||||||||| |   |    
T  48813934 acatcatcaccaccaacagagcttttggacgaagggaccattttgatggacgtctataaaattcaggaactaaatatatattttgcaaaattcagggata 48813835  T
Q  104 aatttggccgattttttaaaatttaagaatgaatatgaggtattagtc 151  Q
    |||||||| ||||||| |||||| ||| | |||| |||||||||||||    
T  48813834 aatttggctgatttttgaaaattcaaggacgaatttgaggtattagtc 48813787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 65 - 152
Target Start/End: Complemental strand, 20493915 - 20493826
Alignment:
Q  65 aattcaggaactaaatagatatttcgcaaaattcatgaa--aatttggccgattttttaaaatttaagaatgaatatgaggtattagtca 152  Q
    ||||||||||||||||||||||||||||||||||| |||  |||||||||||| |||||||||| ||  | |||| ||||||||||||||    
T  20493915 aattcaggaactaaatagatatttcgcaaaattcaagaacgaatttggccgatattttaaaattcaatgacgaatttgaggtattagtca 20493826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 9 - 101
Target Start/End: Complemental strand, 42980782 - 42980687
Alignment:
Q  9 acatcatcaccactaacggggcttttggacgg-tggaccattttgatggacgtc--tataattcaggaactaaatagatatttcgcaaaattcatg 101  Q
    ||||||||||||||||| | ||||||||||||  ||||||||||||||||||||  || |||| ||| |||||||||| |||||| ||||||||||    
T  42980782 acatcatcaccactaacagagcttttggacggagggaccattttgatggacgtctgtaaaattaagggactaaatagaaatttcgtaaaattcatg 42980687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 65 - 153
Target Start/End: Complemental strand, 35401837 - 35401747
Alignment:
Q  65 aattcaggaactaaatagatatttcgcaaaattcatgaa--aatttggccgattttttaaaatttaagaatgaatatgaggtattagtcaa 153  Q
    |||||| | |||||||||||||||| ||||||||| | |  ||||||||||||||||||||||| ||| | |||| |||||||||||||||    
T  35401837 aattcaaggactaaatagatatttcacaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtattagtcaa 35401747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 9 - 99
Target Start/End: Original strand, 48646724 - 48646817
Alignment:
Q  9 acatcatcaccactaacggggcttttggacggt-ggaccattttgatggacgtctataa--ttcaggaactaaatagatatttcgcaaaattca 99  Q
    ||||||||||||||||||  ||||||||||||  |||||||||||||| | |||| |||  |||||| |||||||||||||||||| |||||||    
T  48646724 acatcatcaccactaacgaagcttttggacggaaggaccattttgatgaaggtctgtaaaattcagggactaaatagatatttcgctaaattca 48646817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 9 - 126
Target Start/End: Original strand, 2693230 - 2693351
Alignment:
Q  9 acatcatcaccactaacggggcttttggacgg-tggaccattttgatggacgtct-ataattcaggaactaaatagatatttcgcaaaattcatga--aa 104  Q
    ||||||||| |||||| ||  ||| ||||||| |||||||||||||||||| | | | ||||||   |||||||||||||||||||||||| | ||  ||    
T  2693230 acatcatcatcactaatggaacttatggacggatggaccattttgatggacattttaaaattcaaagactaaatagatatttcgcaaaatttaggaataa 2693329  T
Q  105 atttggccgattttttaaaatt 126  Q
    ||||||| ||||||||||||||    
T  2693330 atttggctgattttttaaaatt 2693351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 65 - 152
Target Start/End: Original strand, 49524734 - 49524823
Alignment:
Q  65 aattcaggaactaaatagatatttcgcaaaattcatgaa--aatttggccgattttttaaaatttaagaatgaatatgaggtattagtca 152  Q
    |||||||| ||||||||| ||||| |||||||||| | |  |||||| |||||||||||||||| ||| | |||| ||||||||||||||    
T  49524734 aattcagggactaaatagctattttgcaaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttgaggtattagtca 49524823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 12 - 126
Target Start/End: Original strand, 52868129 - 52868248
Alignment:
Q  12 tcatcaccactaacggggcttttggacggtg-gaccattttgatggacgtctat--aattcaggaactaaatagatatttcgcaaaattcatgaa--aat 106  Q
    ||||| |||||||||| |||||||||||  | |||||||||||| | ||||| |  |||||||  |||||||||||||||||||||||| ||  |  |||    
T  52868129 tcatcgccactaacggagcttttggacgaagtgaccattttgataggcgtctgttaaattcagagactaaatagatatttcgcaaaatttatagacgaat 52868228  T
Q  107 ttggccgattttttaaaatt 126  Q
    ||| ||||||||||||||||    
T  52868229 ttgaccgattttttaaaatt 52868248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 65 - 126
Target Start/End: Complemental strand, 39345652 - 39345589
Alignment:
Q  65 aattcaggaactaaatagatatttcgcaaaattcatgaa--aatttggccgattttttaaaatt 126  Q
    |||||||| ||||||||| |||||||||||||||| | |  |||||||||||||||||||||||    
T  39345652 aattcagggactaaatagctatttcgcaaaattcagggacgaatttggccgattttttaaaatt 39345589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 74 - 151
Target Start/End: Complemental strand, 48645334 - 48645255
Alignment:
Q  74 actaaatagatatttcgcaaaattcatgaa--aatttggccgattttttaaaatttaagaatgaatatgaggtattagtc 151  Q
    |||||||||||||||||||||||||||| |  |||||| | ||||||| |||||| ||| | |||| |||||||||||||    
T  48645334 actaaatagatatttcgcaaaattcatggacgaatttgactgatttttgaaaattcaaggacgaatttgaggtattagtc 48645255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 65 - 152
Target Start/End: Complemental strand, 43507255 - 43507166
Alignment:
Q  65 aattcaggaactaaatagatatttcgcaaaattcatgaa--aatttggccgattttttaaaatttaagaatgaatatgaggtattagtca 152  Q
    |||||||| ||||| | |||||||||||||||||| | |  || ||||||||||||| |||||| ||| | |||| ||||||||||||||    
T  43507255 aattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtca 43507166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 65 - 151
Target Start/End: Complemental strand, 319361 - 319273
Alignment:
Q  65 aattcaggaactaaatagatatttcgcaaaattcatgaa--aatttggccgattttttaaaatttaagaatgaatatgaggtattagtc 151  Q
    |||||||||||||| | |||||||||||||||||| | |  || ||| ||||||||| |||||| ||| | |||| |||||||||||||    
T  319361 aattcaggaactaatttgatatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 319273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 65 - 151
Target Start/End: Original strand, 4173741 - 4173829
Alignment:
Q  65 aattcaggaactaaatagatatttcgcaaaattcatgaa--aatttggccgattttttaaaatttaagaatgaatatgaggtattagtc 151  Q
    |||||||| ||||| | |||||||||||||||||| | |  || ||||||||||||| |||||| ||| | |||| |||||||||||||    
T  4173741 aattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 4173829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 65 - 151
Target Start/End: Original strand, 33266011 - 33266099
Alignment:
Q  65 aattcaggaactaaatagatatttcgcaaaattcatgaa--aatttggccgattttttaaaatttaagaatgaatatgaggtattagtc 151  Q
    |||||||| ||||| | |||||||||||||||||| |||  || || |||||||||| |||||| ||||| |||| |||| ||||||||    
T  33266011 aattcagggactaatttgatatttcgcaaaattcaggaacgaaattagccgatttttcaaaattcaagaacgaatttgagatattagtc 33266099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 65 - 151
Target Start/End: Original strand, 43508654 - 43508742
Alignment:
Q  65 aattcaggaactaaatagatatttcgcaaaattcatgaa--aatttggccgattttttaaaatttaagaatgaatatgaggtattagtc 151  Q
    |||||||| ||||| | |||||||||||||||||| | |  || ||||||||||||| |||||| ||| | |||| |||||||||||||    
T  43508654 aattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 43508742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 65 - 151
Target Start/End: Complemental strand, 43519512 - 43519424
Alignment:
Q  65 aattcaggaactaaatagatatttcgcaaaattcatgaa--aatttggccgattttttaaaatttaagaatgaatatgaggtattagtc 151  Q
    |||||||| ||||| | |||||||||||||||||| | |  || ||||||||||||| |||||| ||| | |||| |||||||||||||    
T  43519512 aattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 43519424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 82 - 152
Target Start/End: Original strand, 320918 - 320990
Alignment:
Q  82 gatatttcgcaaaattcatgaa--aatttggccgattttttaaaatttaagaatgaatatgaggtattagtca 152  Q
    |||||||||||||||||| | |  || ||||||||||||| |||||| ||| | |||| ||||||||||||||    
T  320918 gatatttcgcaaaattcaaggatgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtca 320990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 151
Target Start/End: Complemental strand, 33264470 - 33264382
Alignment:
Q  65 aattcaggaactaaatagatatttcgcaaaattcatgaa--aatttggccgattttttaaaatttaagaatgaatatgaggtattagtc 151  Q
    |||||||||||||| | ||||||| |||||||||| | |  || ||| ||||||||| |||||| ||| | |||| |||||||||||||    
T  33264470 aattcaggaactaatttgatattttgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 33264382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 2e-22; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 9 - 99
Target Start/End: Complemental strand, 9398807 - 9398714
Alignment:
Q  9 acatcatcaccactaacggggcttttggacggtgg-accattttgatggacgtctataa--ttcaggaactaaatagatatttcgcaaaattca 99  Q
    |||||||||||||||||||  ||||||||||| || |||||||||||| ||||||||||  |||||| ||||||||||||||||||||||||||    
T  9398807 acatcatcaccactaacggaacttttggacggagggaccattttgatgaacgtctataaaattcagggactaaatagatatttcgcaaaattca 9398714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 9 - 126
Target Start/End: Complemental strand, 20523513 - 20523391
Alignment:
Q  9 acatcatcaccactaacggggcttttggacggtgg-accattttgatggacgtctataa--ttcaggaactaaatagatatttcgcaaaattcatgaa-- 103  Q
    ||||||||||||||||| |  ||||||||||| || ||||||||||||||||||| |||  |||||| |||||||||||||||||||||||||| | |      
T  20523513 acatcatcaccactaacagaacttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcaaggacg 20523414  T
Q  104 aatttggccgattttttaaaatt 126  Q
    |||||| ||||||||| ||||||    
T  20523413 aatttgaccgatttttgaaaatt 20523391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 12 - 152
Target Start/End: Original strand, 32439071 - 32439216
Alignment:
Q  12 tcatcaccactaacggggcttttggacggtgg-accattttgatggacgtctataa--ttcaggaactaaatagatatttcgcaaaattcatgaa--aat 106  Q
    ||||||| |||||| |  ||||||||||| || ||||||||||||||||||| |||  |||||| |||||||||||||||||||||||||| | |  |||    
T  32439071 tcatcactactaacagatcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaat 32439170  T
Q  107 ttggccgattttttaaaatttaagaatgaatatgaggtattagtca 152  Q
    ||| |||||||||||||||| ||  |  ||| ||||||||||||||    
T  32439171 ttgaccgattttttaaaattcaatgactaatttgaggtattagtca 32439216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 9 - 99
Target Start/End: Original strand, 7372935 - 7373028
Alignment:
Q  9 acatcatcaccactaacggggcttttggacggtgg-accattttgatggacgtctataa--ttcaggaactaaatagatatttcgcaaaattca 99  Q
    |||||||||||||||| || |||||||||||| || |||||||||||||||| || |||  |||||| |||||||| |||||||||||||||||    
T  7372935 acatcatcaccactaatggagcttttggacggagggaccattttgatggacgcctgtaaaattcagggactaaataaatatttcgcaaaattca 7373028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 12 - 154
Target Start/End: Complemental strand, 32517021 - 32516874
Alignment:
Q  12 tcatcaccactaacggggcttttggacggtgg-accattttgatggacgtctataa--ttcaggaactaaatagatatttcgcaaaattcatgaa--aat 106  Q
    |||||||||||||||| |||||||||||| || || |||||||||||||| | |||  |||| |  |||||||| ||||| | |||||||| | |  |||    
T  32517021 tcatcaccactaacggagcttttggacggagggacaattttgatggacgtatgtaaaattcaagggctaaataggtattttgtaaaattcagggacgaat 32516922  T
Q  107 ttggccgattttttaaaatttaagaatgaatatgaggtattagtcaaa 154  Q
    ||| |||||||||||||||| ||| | |||| ||||||||||||||||    
T  32516921 ttgaccgattttttaaaattcaaggacgaatttgaggtattagtcaaa 32516874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 9 - 99
Target Start/End: Complemental strand, 10568546 - 10568453
Alignment:
Q  9 acatcatcaccactaacggggcttttggacgg-tggaccattttgatggacgtc--tataattcaggaactaaatagatatttcgcaaaattca 99  Q
    ||||||||||||||||||| ||||||||||||  |||| |||||||| ||||||  || |||||||| |||||||| ||||||||| |||||||    
T  10568546 acatcatcaccactaacggagcttttggacggagggactattttgatagacgtctgtaaaattcagggactaaataaatatttcgctaaattca 10568453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 9 - 152
Target Start/End: Original strand, 13613559 - 13613707
Alignment:
Q  9 acatcatcaccactaacggggcttttggacggtgg-accattttgatggacgtctataa--ttcaggaactaaatagatatttcgcaaaattcatgaa-- 103  Q
    |||||||||||||||| ||  ||||||||||| || || | |||||||||||||| |||  |||||| ||||| | |||||||||||||||||| | |      
T  13613559 acatcatcaccactaatggaccttttggacggagggactaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacg 13613658  T
Q  104 aatttggccgattttttaaaatttaagaatgaatatgaggtattagtca 152  Q
    |||||| ||||||||| |||||| ||| | |||| | ||||||||||||    
T  13613659 aatttgaccgatttttcaaaattcaaggacgaatttaaggtattagtca 13613707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 74 - 151
Target Start/End: Original strand, 10569929 - 10570008
Alignment:
Q  74 actaaatagatatttcgcaaaattcatgaa--aatttggccgattttttaaaatttaagaatgaatatgaggtattagtc 151  Q
    ||||||||||||||| |||||||||||| |  |||||||| |||||||||||||| ||| | |||| |||||||||||||    
T  10569929 actaaatagatattttgcaaaattcatggacgaatttggctgattttttaaaattcaaggacgaatttgaggtattagtc 10570008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 12 - 150
Target Start/End: Complemental strand, 11355366 - 11355223
Alignment:
Q  12 tcatcaccactaacggggcttttggacggtgg-accattttgatggacgtctataa--ttcaggaactaaatagatatttcgcaaaattca-tgaa-aat 106  Q
    |||||||||||| ||| |||||||||||| || ||||||||| ||| ||||| |||  |||||| | | ||||||||||||  |||||||| |||  |||    
T  11355366 tcatcaccactaccggagcttttggacggagggaccattttggtggccgtctgtaaaattcagggagttaatagatatttcataaaattcagtgacgaat 11355267  T
Q  107 ttggccgattttttaaaatttaagaatgaatatgaggtattagt 150  Q
    ||| |||||||||||||||| ||| | |||| ||||||||||||    
T  11355266 ttgaccgattttttaaaattcaaggacgaatttgaggtattagt 11355223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 97
Target Start/End: Complemental strand, 6899632 - 6899541
Alignment:
Q  9 acatcatcaccactaacggggcttttggacg-gtggaccattttgatggacgtc--tataattcaggaactaaatagatatttcgcaaaatt 97  Q
    ||||||||| ||||||||| |||||||||||   |||||||||||||||| |||  || |||| ||| |||||||||||||||| |||||||    
T  6899632 acatcatcaacactaacggagcttttggacgaagggaccattttgatggatgtctgtaaaatttagggactaaatagatatttcacaaaatt 6899541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 7049904 - 7049850
Alignment:
Q  9 acatcatcaccactaacggggcttttggacgg-tggaccattttgatggacgtct 62  Q
    ||||||||||||| ||||| ||||||||||||  |||||||||||||||||||||    
T  7049904 acatcatcaccacgaacggagcttttggacggagggaccattttgatggacgtct 7049850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 65 - 151
Target Start/End: Original strand, 32518498 - 32518586
Alignment:
Q  65 aattcaggaactaaatagatatttcgcaaaattcatgaa--aatttggccgattttttaaaatttaagaatgaatatgaggtattagtc 151  Q
    |||||||| ||||| | |||||||||||||||||| | |  || ||||||||||||| |||||| ||| | |||| |||||||||||||    
T  32518498 aattcagggactaatttgatatttcgcaaaattcagggatgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 32518586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 154
Target Start/End: Complemental strand, 7371244 - 7371172
Alignment:
Q  84 tatttcgcaaaattcatgaa--aatttggccgattttttaaaatttaagaatgaatatgaggtattagtcaaa 154  Q
    |||||||||||||||| | |  |||||||||||||||| |||||| ||| | |||  ||||||||||||||||    
T  7371244 tatttcgcaaaattcagggaccaatttggccgatttttgaaaattcaaggacgaagttgaggtattagtcaaa 7371172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 151
Target Start/End: Original strand, 9400036 - 9400124
Alignment:
Q  65 aattcaggaactaaatagatatttcgcaaaattcatgaa--aatttggccgattttttaaaatttaagaatgaatatgaggtattagtc 151  Q
    ||||| || ||||| |||||||||||||||||||| | |  |||||| | ||||||| |||||| ||| | |||| |||||||||||||    
T  9400036 aattcggggactaattagatatttcgcaaaattcaaggatgaatttgactgatttttcaaaattcaaggacgaatttgaggtattagtc 9400124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 9 - 97
Target Start/End: Original strand, 14338452 - 14338543
Alignment:
Q  9 acatcatcaccactaacggggcttttggacggtgg-accattttgatggacgtctat--aattcaggaactaaatagatatttcgcaaaatt 97  Q
    ||||||||| || |||||| ||||||| |||| || ||||||||||||||||||| |  |||||||| |  || |||| |||||||||||||    
T  14338452 acatcatcatcagtaacggagcttttgaacggagggaccattttgatggacgtctgtgaaattcagggatgaattagacatttcgcaaaatt 14338543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 65 - 97
Target Start/End: Complemental strand, 33267149 - 33267117
Alignment:
Q  65 aattcaggaactaaatagatatttcgcaaaatt 97  Q
    ||||| |||||||||||||||||||||||||||    
T  33267149 aattcgggaactaaatagatatttcgcaaaatt 33267117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1454 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold1454
Description:

Target: scaffold1454; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 12 - 148
Target Start/End: Complemental strand, 1407 - 1266
Alignment:
Q  12 tcatcaccactaacggggcttttggacggtgg-accattttgatggacgtctataa--ttcaggaactaaatagatatttcgcaaaattcatgaa--aat 106  Q
    |||||||||||||||| |||||||||||| || ||||||||||||||||||| |||  |||||| ||||||||||||||||  |||||||||| |  |||    
T  1407 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcataaaattcatggacgaat 1308  T
Q  107 ttggccgattttttaaaatttaagaatgaatatgaggtatta 148  Q
    ||  || ||||||||||||| ||| | | || ||||||||||    
T  1307 ttaaccaattttttaaaattcaaggacggatttgaggtatta 1266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 44; Significance: 8e-16; HSPs: 3)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 9 - 153
Target Start/End: Complemental strand, 3441 - 3292
Alignment:
Q  9 acatcatcaccactaacggggcttttggacggtgg-accattttgatggacgtctataa--ttcaggaactaaatagatatttcgcaaaattcatgaa-- 103  Q
    |||||||||| | ||||||  ||||||||||| || || | |||||||||||||| |||  |||||| ||||| | |||||||||||||||||| | |      
T  3441 acatcatcactattaacggaccttttggacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggaca 3342  T
Q  104 aatttggccgattttttaaaatttaagaatgaatatgaggtattagtcaa 153  Q
    || ||||||||||||| |||||| ||| | |||| |||||||||||||||    
T  3341 aaattggccgatttttcaaaattcaaggacgaatttgaggtattagtcaa 3292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 9 - 153
Target Start/End: Complemental strand, 4613 - 4464
Alignment:
Q  9 acatcatcaccactaacggggcttttggacggtgg-accattttgatggacgtctataa--ttcaggaactaaatagatatttcgcaaaattcatgaa-- 103  Q
    |||||||||| | ||||||  ||||||||||| || || | |||||||||||||| |||  |||||| ||||| | |||||||||||||||||| | |      
T  4613 acatcatcactattaacggaccttttggacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggaca 4514  T
Q  104 aatttggccgattttttaaaatttaagaatgaatatgaggtattagtcaa 153  Q
    || ||||||||||||| |||||| ||| | |||| |||||||||||||||    
T  4513 aaattggccgatttttcaaaattcaaggacgaatttgaggtattagtcaa 4464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 153
Target Start/End: Original strand, 14344 - 14434
Alignment:
Q  65 aattcaggaactaaatagatatttcgcaaaattcatgaa--aatttggccgattttttaaaatttaagaatgaatatgaggtattagtcaa 153  Q
    |||||||| ||||| | |||||||||||||||||| | |  || || |||||||||| |||||| ||| | |||| |||||||||||||||    
T  14344 aattcagggactaatttgatatttcgcaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtcaa 14434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 77 - 144
Target Start/End: Complemental strand, 436341 - 436272
Alignment:
Q  77 aaatagatatttcgcaaaattcatgaa--aatttggccgattttttaaaatttaagaatgaatatgaggt 144  Q
    ||||||||||||||||||||| ||| |  |||||||| ||||||| |||||| ||||| |||| ||||||    
T  436341 aaatagatatttcgcaaaatttatggatgaatttggctgatttttgaaaattcaagaacgaatttgaggt 436272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University