View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20693_low_5 (Length: 239)

Name: NF20693_low_5
Description: NF20693
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20693_low_5
NF20693_low_5
[»] chr1 (42 HSPs)
chr1 (177-239)||(32572942-32573004)
chr1 (177-239)||(15245462-15245524)
chr1 (177-239)||(40264050-40264112)
chr1 (179-239)||(23536144-23536204)
chr1 (177-239)||(37214896-37214957)
chr1 (172-239)||(27935501-27935567)
chr1 (172-239)||(32128045-32128112)
chr1 (177-231)||(45565479-45565533)
chr1 (177-239)||(48953589-48953650)
chr1 (177-239)||(50471770-50471832)
chr1 (172-236)||(17502260-17502324)
chr1 (195-239)||(34756465-34756509)
chr1 (177-232)||(5474419-5474474)
chr1 (177-232)||(17502200-17502255)
chr1 (177-232)||(34007360-34007415)
chr1 (177-232)||(34007419-34007474)
chr1 (177-239)||(41823151-41823213)
chr1 (195-239)||(4038152-4038196)
chr1 (195-239)||(5474476-5474520)
chr1 (195-239)||(15034697-15034741)
chr1 (180-239)||(37447350-37447409)
chr1 (180-239)||(44571225-44571283)
chr1 (177-232)||(47074156-47074210)
chr1 (195-232)||(15034743-15034780)
chr1 (195-232)||(23536105-23536142)
chr1 (195-232)||(27935569-27935606)
chr1 (195-239)||(38277453-38277497)
chr1 (195-239)||(45565432-45565476)
chr1 (195-239)||(50005117-50005161)
chr1 (177-239)||(41822534-41822596)
chr1 (195-228)||(4038113-4038146)
chr1 (177-206)||(15034787-15034816)
chr1 (177-206)||(23536069-23536098)
chr1 (177-206)||(24273262-24273291)
chr1 (177-210)||(27804389-27804422)
chr1 (195-232)||(30190220-30190257)
chr1 (177-206)||(30190264-30190293)
chr1 (173-206)||(40264158-40264191)
chr1 (199-239)||(946955-946995)
chr1 (195-239)||(24273211-24273255)
chr1 (195-239)||(26501070-26501114)
chr1 (195-239)||(47165203-47165247)
[»] chr4 (47 HSPs)
chr4 (172-236)||(26250989-26251053)
chr4 (177-232)||(4441412-4441467)
chr4 (177-239)||(42775625-42775687)
chr4 (177-232)||(14982363-14982418)
chr4 (177-239)||(53760781-53760843)
chr4 (175-239)||(11041044-11041107)
chr4 (177-239)||(40548209-40548271)
chr4 (195-239)||(857277-857321)
chr4 (195-239)||(10128051-10128095)
chr4 (195-239)||(15660260-15660304)
chr4 (183-231)||(17727091-17727139)
chr4 (195-239)||(36455945-36455989)
chr4 (179-231)||(40338251-40338303)
chr4 (195-239)||(41139511-41139555)
chr4 (173-232)||(46724208-46724267)
chr4 (172-231)||(56339148-56339207)
chr4 (177-239)||(21012567-21012629)
chr4 (177-210)||(1112607-1112640)
chr4 (195-232)||(4896716-4896753)
chr4 (195-239)||(1107129-1107173)
chr4 (195-239)||(16300210-16300254)
chr4 (172-239)||(26534503-26534575)
chr4 (195-239)||(28845909-28845953)
chr4 (195-239)||(29091175-29091219)
chr4 (177-228)||(32724932-32724986)
chr4 (199-235)||(36456007-36456043)
chr4 (199-239)||(42844585-42844625)
chr4 (195-234)||(1112704-1112743)
chr4 (172-239)||(12914075-12914142)
chr4 (177-224)||(52295051-52295098)
chr4 (172-206)||(31473846-31473880)
chr4 (177-239)||(46243088-46243148)
chr4 (172-206)||(49111440-49111474)
chr4 (195-232)||(857323-857360)
chr4 (177-206)||(7352814-7352843)
chr4 (195-232)||(28845955-28845992)
chr4 (177-206)||(36455909-36455938)
chr4 (195-232)||(49111396-49111433)
chr4 (195-231)||(1112643-1112679)
chr4 (195-231)||(1539679-1539715)
chr4 (195-239)||(7352850-7352894)
chr4 (178-206)||(10633035-10633063)
chr4 (172-204)||(16516168-16516200)
chr4 (195-239)||(31473887-31473931)
chr4 (199-239)||(41498532-41498572)
chr4 (177-229)||(54566192-54566244)
chr4 (199-239)||(55266852-55266892)
[»] chr7 (42 HSPs)
chr7 (177-239)||(40853989-40854051)
chr7 (177-231)||(19865539-19865593)
chr7 (177-239)||(30080778-30080840)
chr7 (177-239)||(46069406-46069473)
chr7 (177-239)||(30587880-30587942)
chr7 (177-239)||(32650593-32650655)
chr7 (195-239)||(5644715-5644759)
chr7 (195-239)||(29065857-29065901)
chr7 (177-232)||(13814978-13815033)
chr7 (177-236)||(14790134-14790192)
chr7 (177-239)||(31913238-31913300)
chr7 (195-239)||(40110775-40110819)
chr7 (195-239)||(49052862-49052906)
chr7 (172-206)||(43955642-43955676)
chr7 (195-232)||(40110822-40110859)
chr7 (195-239)||(44915272-44915316)
chr7 (172-214)||(31913300-31913343)
chr7 (177-239)||(40495252-40495312)
chr7 (197-239)||(23548588-23548630)
chr7 (172-206)||(35455801-35455835)
chr7 (177-239)||(45984360-45984422)
chr7 (177-239)||(45988720-45988782)
chr7 (195-228)||(2057433-2057466)
chr7 (177-206)||(14603290-14603319)
chr7 (177-206)||(26162165-26162194)
chr7 (177-206)||(28539196-28539225)
chr7 (177-206)||(31632724-31632753)
chr7 (177-206)||(34398977-34399006)
chr7 (177-206)||(39342670-39342699)
chr7 (177-206)||(40110739-40110768)
chr7 (177-206)||(43955519-43955548)
chr7 (195-236)||(43955555-43955596)
chr7 (195-232)||(44915233-44915270)
chr7 (177-205)||(2057397-2057425)
chr7 (195-239)||(2057472-2057516)
chr7 (195-239)||(3905636-3905680)
chr7 (195-239)||(21635962-21636006)
chr7 (195-239)||(26162114-26162158)
chr7 (195-239)||(29639192-29639236)
chr7 (195-239)||(31632760-31632804)
chr7 (176-220)||(36328794-36328838)
chr7 (195-239)||(43791128-43791172)
[»] chr5 (49 HSPs)
chr5 (177-239)||(22305114-22305176)
chr5 (177-231)||(2550330-2550384)
chr5 (177-239)||(33146193-33146255)
chr5 (177-239)||(15270842-15270904)
chr5 (177-239)||(28490013-28490074)
chr5 (183-239)||(17542349-17542405)
chr5 (179-239)||(28489485-28489545)
chr5 (172-231)||(34105086-34105145)
chr5 (173-224)||(40643834-40643885)
chr5 (177-231)||(12064464-12064518)
chr5 (177-230)||(34982293-34982346)
chr5 (195-239)||(9764376-9764420)
chr5 (195-239)||(20523210-20523254)
chr5 (195-237)||(3563315-3563357)
chr5 (195-232)||(15373998-15374035)
chr5 (195-232)||(32390056-32390093)
chr5 (177-214)||(33146063-33146100)
chr5 (177-210)||(40090449-40090482)
chr5 (195-239)||(15374037-15374081)
chr5 (195-235)||(16515099-16515139)
chr5 (195-239)||(22766990-22767034)
chr5 (195-239)||(25935278-25935322)
chr5 (195-239)||(37722882-37722926)
chr5 (195-230)||(2721557-2721592)
chr5 (175-206)||(2721599-2721630)
chr5 (177-220)||(22302541-22302584)
chr5 (195-234)||(26281262-26281301)
chr5 (172-206)||(13243532-13243566)
chr5 (172-206)||(22766949-22766983)
chr5 (177-206)||(2316380-2316409)
chr5 (195-232)||(2316463-2316500)
chr5 (210-239)||(6634091-6634120)
chr5 (195-228)||(9764426-9764459)
chr5 (198-231)||(12479948-12479981)
chr5 (177-206)||(15374088-15374117)
chr5 (177-206)||(15804324-15804353)
chr5 (177-206)||(22303909-22303938)
chr5 (177-206)||(25935329-25935358)
chr5 (177-206)||(28828369-28828398)
chr5 (195-232)||(32470966-32471003)
chr5 (177-206)||(40643945-40643974)
chr5 (195-232)||(40809379-40809416)
chr5 (177-206)||(41762254-41762283)
chr5 (198-234)||(16515045-16515081)
chr5 (174-206)||(19533946-19533978)
chr5 (177-205)||(20523262-20523290)
chr5 (179-239)||(37241098-37241157)
chr5 (195-239)||(40090402-40090446)
chr5 (195-239)||(40643895-40643938)
[»] chr3 (41 HSPs)
chr3 (177-239)||(46429416-46429478)
chr3 (177-239)||(332052-332114)
chr3 (179-239)||(27251916-27251976)
chr3 (177-225)||(27485474-27485522)
chr3 (177-232)||(25655317-25655372)
chr3 (177-239)||(2104754-2104816)
chr3 (177-239)||(28092291-28092353)
chr3 (172-232)||(331990-332049)
chr3 (195-239)||(31070444-31070488)
chr3 (177-236)||(25655377-25655436)
chr3 (177-239)||(38506866-38506928)
chr3 (177-239)||(54761554-54761616)
chr3 (195-239)||(44436296-44436340)
chr3 (177-231)||(9007453-9007507)
chr3 (177-239)||(39215859-39215920)
chr3 (195-233)||(46672799-46672837)
chr3 (177-239)||(47284193-47284255)
chr3 (195-232)||(9129428-9129465)
chr3 (195-232)||(9137535-9137572)
chr3 (195-232)||(27251978-27252015)
chr3 (195-232)||(37321588-37321625)
chr3 (195-232)||(44436342-44436379)
chr3 (195-232)||(44692906-44692943)
chr3 (195-239)||(5415860-5415904)
chr3 (195-239)||(21307522-21307566)
chr3 (195-239)||(44692860-44692904)
chr3 (199-239)||(47284268-47284308)
chr3 (172-206)||(46672844-46672878)
chr3 (195-237)||(49457381-49457423)
chr3 (181-210)||(28092220-28092249)
chr3 (177-206)||(36398030-36398059)
chr3 (177-206)||(42005994-42006023)
chr3 (177-206)||(44436260-44436289)
chr3 (177-206)||(44692824-44692853)
chr3 (177-206)||(47767434-47767463)
chr3 (177-206)||(49457345-49457374)
chr3 (195-239)||(9129382-9129426)
chr3 (195-239)||(9137489-9137533)
chr3 (195-239)||(19475854-19475898)
chr3 (196-232)||(28092253-28092289)
chr3 (177-213)||(37321619-37321655)
[»] chr2 (40 HSPs)
chr2 (177-239)||(14537276-14537338)
chr2 (177-239)||(3345765-3345827)
chr2 (177-239)||(11824757-11824819)
chr2 (175-239)||(11607239-11607303)
chr2 (177-232)||(11684674-11684729)
chr2 (177-239)||(8736432-8736494)
chr2 (175-239)||(11595337-11595401)
chr2 (195-239)||(27033528-27033572)
chr2 (181-232)||(11824704-11824755)
chr2 (172-239)||(20935722-20935788)
chr2 (177-239)||(21504470-21504532)
chr2 (180-232)||(3345829-3345882)
chr2 (195-239)||(784870-784914)
chr2 (195-239)||(14954344-14954388)
chr2 (195-239)||(40026102-40026146)
chr2 (195-239)||(41461592-41461636)
chr2 (177-228)||(10244265-10244316)
chr2 (177-236)||(44205652-44205711)
chr2 (177-239)||(41585681-41585743)
chr2 (195-232)||(11716446-11716483)
chr2 (195-232)||(14365738-14365775)
chr2 (195-232)||(14537237-14537274)
chr2 (177-210)||(35047717-35047750)
chr2 (195-239)||(11532244-11532288)
chr2 (179-214)||(19231301-19231336)
chr2 (181-231)||(32840191-32840241)
chr2 (177-206)||(769038-769067)
chr2 (177-206)||(1583851-1583880)
chr2 (177-206)||(10480121-10480150)
chr2 (177-206)||(11141307-11141336)
chr2 (177-206)||(14365702-14365731)
chr2 (195-239)||(14365778-14365820)
chr2 (177-206)||(14537201-14537230)
chr2 (177-206)||(33189299-33189328)
chr2 (177-206)||(41461643-41461672)
chr2 (195-239)||(10244215-10244259)
chr2 (174-206)||(11793894-11793926)
chr2 (195-239)||(11793933-11793977)
chr2 (177-205)||(27033492-27033520)
chr2 (195-239)||(32839639-32839683)
[»] chr8 (38 HSPs)
chr8 (21-171)||(4221536-4221683)
chr8 (177-239)||(34008801-34008863)
chr8 (177-231)||(29611390-29611444)
chr8 (177-239)||(30444934-30444996)
chr8 (177-239)||(42739951-42740013)
chr8 (178-239)||(26520440-26520501)
chr8 (177-230)||(42711306-42711359)
chr8 (195-239)||(3853654-3853698)
chr8 (195-239)||(3858112-3858156)
chr8 (177-239)||(38573472-38573539)
chr8 (177-231)||(7202867-7202921)
chr8 (177-239)||(30435322-30435383)
chr8 (177-221)||(7202923-7202967)
chr8 (195-239)||(17110946-17110990)
chr8 (177-228)||(14799981-14800031)
chr8 (173-232)||(38573412-38573470)
chr8 (173-234)||(42740013-42740074)
chr8 (195-239)||(4156244-4156288)
chr8 (195-239)||(13404904-13404948)
chr8 (172-239)||(24510278-24510345)
chr8 (177-239)||(8469517-8469579)
chr8 (176-206)||(29482859-29482889)
chr8 (177-239)||(34388528-34388589)
chr8 (177-206)||(3853618-3853647)
chr8 (177-206)||(3858076-3858105)
chr8 (177-206)||(14991694-14991723)
chr8 (195-232)||(17110907-17110944)
chr8 (177-206)||(29257403-29257432)
chr8 (195-232)||(32626029-32626066)
chr8 (177-206)||(33377349-33377378)
chr8 (195-239)||(33902705-33902747)
chr8 (195-232)||(42711364-42711401)
chr8 (195-239)||(13144621-13144665)
chr8 (195-239)||(14800037-14800081)
chr8 (195-239)||(15186818-15186862)
chr8 (195-239)||(23011772-23011816)
chr8 (199-231)||(35404751-35404783)
chr8 (195-239)||(44889392-44889436)
[»] scaffold0240 (1 HSPs)
scaffold0240 (177-239)||(17576-17638)
[»] chr6 (12 HSPs)
chr6 (177-239)||(1195353-1195415)
chr6 (195-239)||(776157-776201)
chr6 (195-239)||(9763050-9763094)
chr6 (177-232)||(9285731-9285786)
chr6 (177-239)||(8475181-8475243)
chr6 (195-239)||(9285685-9285729)
chr6 (195-232)||(6919746-6919783)
chr6 (172-206)||(33733429-33733463)
chr6 (177-206)||(6919835-6919864)
chr6 (177-206)||(9285649-9285678)
chr6 (195-231)||(15299510-15299546)
chr6 (195-231)||(28918203-28918239)
[»] scaffold0039 (1 HSPs)
scaffold0039 (172-239)||(109046-109113)
[»] scaffold0009 (1 HSPs)
scaffold0009 (195-236)||(42035-42076)
[»] scaffold0169 (1 HSPs)
scaffold0169 (195-239)||(4113-4157)
[»] scaffold0048 (1 HSPs)
scaffold0048 (195-239)||(82981-83025)
[»] scaffold0044 (2 HSPs)
scaffold0044 (195-239)||(56351-56395)
scaffold0044 (177-228)||(56289-56345)
[»] scaffold1562 (3 HSPs)
scaffold1562 (173-206)||(533-566)
scaffold1562 (195-228)||(493-526)
scaffold1562 (195-239)||(443-487)
[»] scaffold1158 (3 HSPs)
scaffold1158 (173-206)||(2027-2060)
scaffold1158 (195-228)||(2067-2100)
scaffold1158 (195-239)||(2106-2150)
[»] scaffold0337 (1 HSPs)
scaffold0337 (177-239)||(16365-16429)
[»] scaffold0400 (1 HSPs)
scaffold0400 (195-239)||(4489-4533)
[»] scaffold0365 (1 HSPs)
scaffold0365 (195-239)||(5133-5177)
[»] scaffold0027 (1 HSPs)
scaffold0027 (195-239)||(10924-10968)


Alignment Details
Target: chr1 (Bit Score: 59; Significance: 4e-25; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 177 - 239
Target Start/End: Original strand, 32572942 - 32573004
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  32572942 agtgtgtttggatgggggaatgttttgagggaattcaactactttgaggtgaattctattgtt 32573004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 177 - 239
Target Start/End: Original strand, 15245462 - 15245524
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  15245462 agtgtgtttggatgggggaatgttttgagggaattcaactactttaaggtgaattctattgtt 15245524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 177 - 239
Target Start/End: Original strand, 40264050 - 40264112
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    ||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||    
T  40264050 agtgtgtttggataggggaatgttttgagggaattcaactactttgagatgaattctattgtt 40264112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 179 - 239
Target Start/End: Complemental strand, 23536204 - 23536144
Alignment:
Q  179 tgtgtttggatgggggaatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||    
T  23536204 tgtgtttggatgggggaatgttttgagggaattcaactactttaaggtgaattatattgtt 23536144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 177 - 239
Target Start/End: Complemental strand, 37214957 - 37214896
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||||||||||||| ||||||||||||| ||||||||||| ||||||||||||||||||||    
T  37214957 agtgtgtttggatgggagaatgttttgagggaattcaactac-ttgaggtgaattctattgtt 37214896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 239
Target Start/End: Original strand, 27935501 - 27935567
Alignment:
Q  172 tttatagtgtgtttggatgggggaatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||| ||||||||||||||||  ||||||||||| ||||||||||||||| |||||||||||||||||    
T  27935501 tttagagtgtgtttggatggga-aatgttttgagaaaattcaactactttcaggtgaattctattgtt 27935567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 239
Target Start/End: Original strand, 32128045 - 32128112
Alignment:
Q  172 tttatagtgtgtttggatgggggaatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||| ||||||||| |||||||||||||||||||| ||||||| ||||||| ||||||||| ||||||    
T  32128045 tttagagtgtgtttagatgggggaatgttttgagggaattcaaatactttgtggtgaattccattgtt 32128112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 177 - 231
Target Start/End: Complemental strand, 45565533 - 45565479
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgaggaaattcaactactttgaggtgaatt 231  Q
    |||||||||||||||  ||||||||||||| ||||||||||||||||||||||||    
T  45565533 agtgtgtttggatggaagaatgttttgagggaattcaactactttgaggtgaatt 45565479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 177 - 239
Target Start/End: Original strand, 48953589 - 48953650
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||||||||||||||||||||||||| | ||||||| || |||||||||||||||||||||    
T  48953589 agtgtgtttggatgggggaatgttttgaaggaattcaaata-tttgaggtgaattctattgtt 48953650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 177 - 239
Target Start/End: Original strand, 50471770 - 50471832
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||||||||||||||||| ||||||||| ||||||| |||||| ||||||||| |||||||    
T  50471770 agtgtgtttggatgggggaaagttttgagggaattcaaatactttcaggtgaattttattgtt 50471832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 172 - 236
Target Start/End: Complemental strand, 17502324 - 17502260
Alignment:
Q  172 tttatagtgtgtttggatgggggaatgttttgaggaaattcaactactttgaggtgaattctatt 236  Q
    |||| ||||||||| ||| |||||||||||||||| |||||||||||||| || |||||||||||    
T  17502324 tttagagtgtgttttgattggggaatgttttgagggaattcaactactttaagttgaattctatt 17502260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 34756465 - 34756509
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||||||||| ||||||||||||||||||||||||||||||||    
T  34756465 aatgttttgagggaattcaactactttgaggtgaattctattgtt 34756509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 232
Target Start/End: Original strand, 5474419 - 5474474
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgaggaaattcaactactttgaggtgaattc 232  Q
    |||||||||||||||||||||||||||||| |||| || |||||||| ||||||||    
T  5474419 agtgtgtttggatgggggaatgttttgagggaatttaattactttgaagtgaattc 5474474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 232
Target Start/End: Original strand, 17502200 - 17502255
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgaggaaattcaactactttgaggtgaattc 232  Q
    |||||||||||||| |||||| |||||||  |||||||||||||||||||||||||    
T  17502200 agtgtgtttggatgagggaatattttgagagaattcaactactttgaggtgaattc 17502255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 232
Target Start/End: Original strand, 34007360 - 34007415
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgaggaaattcaactactttgaggtgaattc 232  Q
    ||||||||||||||||| ||| |||||||| ||||||||||||||||| |||||||    
T  34007360 agtgtgtttggatggggaaatattttgagggaattcaactactttgagttgaattc 34007415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 232
Target Start/End: Complemental strand, 34007474 - 34007419
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgaggaaattcaactactttgaggtgaattc 232  Q
    ||||||||||||||||| ||| |||||||| ||||||||||||||||| |||||||    
T  34007474 agtgtgtttggatggggaaatattttgagggaattcaactactttgagttgaattc 34007419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 177 - 239
Target Start/End: Complemental strand, 41823213 - 41823151
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||||||||||||||||||||||||| | ||||||| ||| ||||| ||||||| ||||||    
T  41823213 agtgtgtttggatgggggaatgttttgaaggaattcaaataccttgagatgaattccattgtt 41823151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 4038196 - 4038152
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||||||||| |||||||||||||| |||||||||||||||||    
T  4038196 aatgttttgagggaattcaactactttaaggtgaattctattgtt 4038152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 5474520 - 5474476
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||||||||| |||||||||||||| |||||||||||||||||    
T  5474520 aatgttttgagggaattcaactactttaaggtgaattctattgtt 5474476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 15034697 - 15034741
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||||||||| |||||||||||||| |||||||||||||||||    
T  15034697 aatgttttgagggaattcaactactttaaggtgaattctattgtt 15034741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 180 - 239
Target Start/End: Complemental strand, 37447409 - 37447350
Alignment:
Q  180 gtgtttggatgggggaatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||||||| |||||||||||||||  ||||||| |||||||| |||||||| ||||||    
T  37447409 gtgtttggataggggaatgttttgagagaattcaaatactttgatgtgaattccattgtt 37447350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 180 - 239
Target Start/End: Original strand, 44571225 - 44571283
Alignment:
Q  180 gtgtttggatgggggaatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||||||||||| |||||||||||| ||||||| |||||||| |||||||| ||||||    
T  44571225 gtgtttggatgggg-aatgttttgagggaattcaaatactttgaagtgaattccattgtt 44571283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 232
Target Start/End: Original strand, 47074156 - 47074210
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgaggaaattcaactactttgaggtgaattc 232  Q
    ||||||||||||||||| ||| |||||| | |||||||||||||||||||||||||    
T  47074156 agtgtgtttggatgggg-aatattttgaaggaattcaactactttgaggtgaattc 47074210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 195 - 232
Target Start/End: Complemental strand, 15034780 - 15034743
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattc 232  Q
    |||||||||||| |||||||||||||||||||||||||    
T  15034780 aatgttttgagggaattcaactactttgaggtgaattc 15034743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 195 - 232
Target Start/End: Original strand, 23536105 - 23536142
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattc 232  Q
    |||||||||||| |||||||||||||||||||||||||    
T  23536105 aatgttttgagggaattcaactactttgaggtgaattc 23536142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 195 - 232
Target Start/End: Complemental strand, 27935606 - 27935569
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattc 232  Q
    |||||||||||||||||||||||||||||| |||||||    
T  27935606 aatgttttgaggaaattcaactactttgagttgaattc 27935569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 38277453 - 38277497
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||||||| | |||||||||||||||||||||||| |||||||    
T  38277453 aatgttttgaaggaattcaactactttgaggtgaattatattgtt 38277497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 45565432 - 45565476
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||||||||| |||||||||| ||| |||||||||||||||||    
T  45565432 aatgttttgagggaattcaactattttaaggtgaattctattgtt 45565476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 50005117 - 50005161
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||||||||  ||||||||| ||||||||||||||||||||||    
T  50005117 aatgttttgagcgaattcaacttctttgaggtgaattctattgtt 50005161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 239
Target Start/End: Complemental strand, 41822596 - 41822534
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    ||||||||||||||   ||||||||||||| ||||||| |||||| || ||||||| ||||||    
T  41822596 agtgtgtttggatgaatgaatgttttgagggaattcaaatactttaagatgaattccattgtt 41822534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 228
Target Start/End: Original strand, 4038113 - 4038146
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtga 228  Q
    |||||||||||| |||||||||||||||||||||    
T  4038113 aatgttttgagggaattcaactactttgaggtga 4038146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 206
Target Start/End: Complemental strand, 15034816 - 15034787
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgagg 206  Q
    ||||||||||||||||||||||||||||||    
T  15034816 agtgtgtttggatgggggaatgttttgagg 15034787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 206
Target Start/End: Original strand, 23536069 - 23536098
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgagg 206  Q
    ||||||||||||||||||||||||||||||    
T  23536069 agtgtgtttggatgggggaatgttttgagg 23536098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 206
Target Start/End: Complemental strand, 24273291 - 24273262
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgagg 206  Q
    ||||||||||||||||||||||||||||||    
T  24273291 agtgtgtttggatgggggaatgttttgagg 24273262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 210
Target Start/End: Complemental strand, 27804422 - 27804389
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgaggaaat 210  Q
    ||||||||||||||| ||||||||||||||||||    
T  27804422 agtgtgtttggatggaggaatgttttgaggaaat 27804389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 232
Target Start/End: Complemental strand, 30190257 - 30190220
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattc 232  Q
    |||||||||||| |||||||||| ||||||||||||||    
T  30190257 aatgttttgaggtaattcaactattttgaggtgaattc 30190220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 206
Target Start/End: Complemental strand, 30190293 - 30190264
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgagg 206  Q
    ||||||||||||||||||||||||||||||    
T  30190293 agtgtgtttggatgggggaatgttttgagg 30190264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 206
Target Start/End: Complemental strand, 40264191 - 40264158
Alignment:
Q  173 ttatagtgtgtttggatgggggaatgttttgagg 206  Q
    ||||||||||||||||||||||||| ||||||||    
T  40264191 ttatagtgtgtttggatgggggaatattttgagg 40264158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 239
Target Start/End: Original strand, 946955 - 946995
Alignment:
Q  199 ttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||||||||||||| |||| |||||||||||| ||||||    
T  946955 ttttgaggaaattcaaatactatgaggtgaattccattgtt 946995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 24273255 - 24273211
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||| ||||| ||||||| ||||||||||||||||| ||||||    
T  24273255 aatgttatgagggaattcaaatactttgaggtgaattccattgtt 24273211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 26501114 - 26501070
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||||||||| ||||||| |||||||| |||||||| ||||||    
T  26501114 aatgttttgagggaattcaaatactttgatgtgaattccattgtt 26501070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 47165247 - 47165203
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||||||||| ||||||| |||||| |||||||||| ||||||    
T  47165247 aatgttttgagggaattcaaatactttaaggtgaattccattgtt 47165203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 57; Significance: 6e-24; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 172 - 236
Target Start/End: Complemental strand, 26251053 - 26250989
Alignment:
Q  172 tttatagtgtgtttggatgggggaatgttttgaggaaattcaactactttgaggtgaattctatt 236  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  26251053 tttagagtgtgtttggatgggggaatgttttgagggaattcaactactttgaggtgaattctatt 26250989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 177 - 232
Target Start/End: Complemental strand, 4441467 - 4441412
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgaggaaattcaactactttgaggtgaattc 232  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4441467 agtgtgtttggatgggggaatgttttgaggaaattcaactactttgaggtgaattc 4441412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 177 - 239
Target Start/End: Original strand, 42775625 - 42775687
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||||    
T  42775625 agtgtgtttggatgggggaatgttttgagggaattcaaatactttgaggtgaattccattgtt 42775687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 177 - 232
Target Start/End: Complemental strand, 14982418 - 14982363
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgaggaaattcaactactttgaggtgaattc 232  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  14982418 agtgtgtttggatgggggaatcttttgagggaattcaactactttgaggtgaattc 14982363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 177 - 239
Target Start/End: Complemental strand, 53760843 - 53760781
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||||||| ||||||||||||||||||| ||||||| || ||||| |||||||||||||||    
T  53760843 agtgtgtttgaatgggggaatgttttgagggaattcaaatattttgatgtgaattctattgtt 53760781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 175 - 239
Target Start/End: Complemental strand, 11041107 - 11041044
Alignment:
Q  175 atagtgtgtttggatgggggaatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    ||||||||||||| ||||| |||||||||||| ||||||||||||||  ||||||||||||||||    
T  11041107 atagtgtgtttggttgggg-aatgttttgagggaattcaactactttatggtgaattctattgtt 11041044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 177 - 239
Target Start/End: Complemental strand, 40548271 - 40548209
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||||||||||| |  |||||||||||||||||||| ||||||| ||||||||| ||||||    
T  40548271 agtgtgtttggatgagaaaatgttttgaggaaattcaaatactttggggtgaattccattgtt 40548209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 857277 - 857321
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||||||||| |||||||||||||| |||||||||||||||||    
T  857277 aatgttttgagggaattcaactactttaaggtgaattctattgtt 857321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 10128095 - 10128051
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||    
T  10128095 aatgttttgagggaattcaactactttgagatgaattctattgtt 10128051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 15660304 - 15660260
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||    
T  15660304 aatgttttgagggaattcaactactttgagctgaattctattgtt 15660260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 183 - 231
Target Start/End: Original strand, 17727091 - 17727139
Alignment:
Q  183 tttggatgggggaatgttttgaggaaattcaactactttgaggtgaatt 231  Q
    ||||||||||||||||||||| || ||||||| ||||||||||||||||    
T  17727091 tttggatgggggaatgttttgtgggaattcaaatactttgaggtgaatt 17727139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 36455945 - 36455989
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||||||||| |||||||||||||| |||||||||||||||||    
T  36455945 aatgttttgagggaattcaactactttaaggtgaattctattgtt 36455989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 179 - 231
Target Start/End: Complemental strand, 40338303 - 40338251
Alignment:
Q  179 tgtgtttggatgggggaatgttttgaggaaattcaactactttgaggtgaatt 231  Q
    |||||||||||| ||||||||||||| | ||||||| ||||||||||||||||    
T  40338303 tgtgtttggatgagggaatgttttgatggaattcaaatactttgaggtgaatt 40338251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 41139511 - 41139555
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||||||||||||||||| |||||| |||||||||||||||||    
T  41139511 aatgttttgaggaaattcaaatacttttaggtgaattctattgtt 41139555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 173 - 232
Target Start/End: Complemental strand, 46724267 - 46724208
Alignment:
Q  173 ttatagtgtgtttggatgggggaatgttttgaggaaattcaactactttgaggtgaattc 232  Q
    ||||||||||||||||||||| ||| |||||||| ||||||| || ||||||||| ||||    
T  46724267 ttatagtgtgtttggatggggaaatattttgagggaattcaattattttgaggtggattc 46724208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 231
Target Start/End: Original strand, 56339148 - 56339207
Alignment:
Q  172 tttatagtgtgtttggatgggggaatgttttgaggaaattcaactactttgaggtgaatt 231  Q
    |||| ||||||||||||||  |||||||||||||| ||||||| |||||||| |||||||    
T  56339148 tttagagtgtgtttggatgatggaatgttttgagggaattcaaatactttgatgtgaatt 56339207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 177 - 239
Target Start/End: Complemental strand, 21012629 - 21012567
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||||||||||||  ||||||||||||| |||| || || |||||||||||||| ||||||    
T  21012629 agtgtgtttggatggacgaatgttttgagggaatttaaatattttgaggtgaattccattgtt 21012567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 177 - 210
Target Start/End: Original strand, 1112607 - 1112640
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgaggaaat 210  Q
    ||||||||||||||||||||||||||||||||||    
T  1112607 agtgtgtttggatgggggaatgttttgaggaaat 1112640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 195 - 232
Target Start/End: Complemental strand, 4896753 - 4896716
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattc 232  Q
    |||||||||||| |||||||||||||||||||||||||    
T  4896753 aatgttttgagggaattcaactactttgaggtgaattc 4896716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 1107173 - 1107129
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||||||||| |||||||||||| | |||||||||||||||||    
T  1107173 aatgttttgagggaattcaactactctaaggtgaattctattgtt 1107129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 16300254 - 16300210
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    ||||||||||| |||||||| ||||||||||||||||| ||||||    
T  16300254 aatgttttgagaaaattcaaatactttgaggtgaattccattgtt 16300210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 239
Target Start/End: Original strand, 26534503 - 26534575
Alignment:
Q  172 tttatagtgtgtttggatgggggaatg-----ttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||| ||||||||||||||||||||||     |||||||| ||||||| |||||||  |||||||||||||||    
T  26534503 tttagagtgtgtttggatgggggaatgtaatgttttgagggaattcaaatactttgttgtgaattctattgtt 26534575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 28845909 - 28845953
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    ||||||| |||| |||||||||||||| |||||||||||||||||    
T  28845909 aatgtttcgagggaattcaactactttaaggtgaattctattgtt 28845953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 29091175 - 29091219
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||||||||| ||||||| |||||||| |||||||||||||||    
T  29091175 aatgttttgagggaattcaaatactttgatgtgaattctattgtt 29091219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 32724932 - 32724986
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgagga---aattcaactactttgaggtga 228  Q
    |||||||||| ||||||||||||||||||||   ||||||| |||||||||||||    
T  32724932 agtgtgtttgaatgggggaatgttttgaggagggaattcaattactttgaggtga 32724986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 199 - 235
Target Start/End: Complemental strand, 36456043 - 36456007
Alignment:
Q  199 ttttgaggaaattcaactactttgaggtgaattctat 235  Q
    ||||||||||||||||||||||| |||||||||||||    
T  36456043 ttttgaggaaattcaactactttaaggtgaattctat 36456007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 199 - 239
Target Start/End: Original strand, 42844585 - 42844625
Alignment:
Q  199 ttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||| | ||||||||||||||||||||||||||||||||    
T  42844585 ttttgaaggaattcaactactttgaggtgaattctattgtt 42844625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 195 - 234
Target Start/End: Complemental strand, 1112743 - 1112704
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattcta 234  Q
    ||||||| |||| |||||||||||||||||||||||||||    
T  1112743 aatgtttcgagggaattcaactactttgaggtgaattcta 1112704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 239
Target Start/End: Complemental strand, 12914142 - 12914075
Alignment:
Q  172 tttatagtgtgtttggatgggggaatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||| |||||||||||||| |  |||||||||||| |||||||||| ||| || |||||| |||||||    
T  12914142 tttagagtgtgtttggatgagaaaatgttttgagggaattcaactattttaagatgaattttattgtt 12914075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 52295098 - 52295051
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgaggaaattcaactactttgag 224  Q
    ||||||||||||||||||||||||| |||| ||||||| || ||||||    
T  52295098 agtgtgtttggatgggggaatgtttcgagggaattcaaatattttgag 52295051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 206
Target Start/End: Original strand, 31473846 - 31473880
Alignment:
Q  172 tttatagtgtgtttggatgggggaatgttttgagg 206  Q
    |||| ||||||||||||||||||||||||||||||    
T  31473846 tttagagtgtgtttggatgggggaatgttttgagg 31473880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 239
Target Start/End: Complemental strand, 46243148 - 46243088
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||||||||||||||||||||||||||  ||||||| || |||||||| ||||| ||||||    
T  46243148 agtgtgtttggatgggggaatgttttgagagaattcaaata-tttgaggt-aattccattgtt 46243088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 206
Target Start/End: Complemental strand, 49111474 - 49111440
Alignment:
Q  172 tttatagtgtgtttggatgggggaatgttttgagg 206  Q
    |||| ||||||||||||||||||||||||||||||    
T  49111474 tttagagtgtgtttggatgggggaatgttttgagg 49111440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 232
Target Start/End: Complemental strand, 857360 - 857323
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattc 232  Q
    |||||||||||| ||||||||||||||||| |||||||    
T  857360 aatgttttgagggaattcaactactttgagttgaattc 857323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 206
Target Start/End: Original strand, 7352814 - 7352843
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgagg 206  Q
    ||||||||||||||||||||||||||||||    
T  7352814 agtgtgtttggatgggggaatgttttgagg 7352843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 232
Target Start/End: Complemental strand, 28845992 - 28845955
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattc 232  Q
    |||||||||||| ||||||||||||||||| |||||||    
T  28845992 aatgttttgagggaattcaactactttgagttgaattc 28845955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 206
Target Start/End: Original strand, 36455909 - 36455938
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgagg 206  Q
    ||||||||||||||||||||||||||||||    
T  36455909 agtgtgtttggatgggggaatgttttgagg 36455938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 232
Target Start/End: Complemental strand, 49111433 - 49111396
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattc 232  Q
    |||||||||||| |||||||||| ||||||||||||||    
T  49111433 aatgttttgagggaattcaactattttgaggtgaattc 49111396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 231
Target Start/End: Original strand, 1112643 - 1112679
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaatt 231  Q
    ||||||| |||| ||||||||||||||||||||||||    
T  1112643 aatgtttcgagggaattcaactactttgaggtgaatt 1112679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 231
Target Start/End: Original strand, 1539679 - 1539715
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaatt 231  Q
    |||||||||||| ||||||| ||||||||||||||||    
T  1539679 aatgttttgagggaattcaaatactttgaggtgaatt 1539715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 7352850 - 7352894
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||||||| | |||||||||| ||| |||||||||||||||||    
T  7352850 aatgttttgatggaattcaactattttaaggtgaattctattgtt 7352894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 206
Target Start/End: Original strand, 10633035 - 10633063
Alignment:
Q  178 gtgtgtttggatgggggaatgttttgagg 206  Q
    |||||||||||||||||||||||||||||    
T  10633035 gtgtgtttggatgggggaatgttttgagg 10633063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 204
Target Start/End: Original strand, 16516168 - 16516200
Alignment:
Q  172 tttatagtgtgtttggatgggggaatgttttga 204  Q
    |||| ||||||||||||||||||||||||||||    
T  16516168 tttagagtgtgtttggatgggggaatgttttga 16516200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 31473887 - 31473931
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||| ||||| ||||||| |||||||||||||||| |||||||    
T  31473887 aatgttatgagggaattcaaatactttgaggtgaattttattgtt 31473931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 239
Target Start/End: Original strand, 41498532 - 41498572
Alignment:
Q  199 ttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||||| |||||||| ||||| |||||||||||||||||    
T  41498532 ttttgagggaattcaaccactttaaggtgaattctattgtt 41498572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 229
Target Start/End: Original strand, 54566192 - 54566244
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgaggaaattcaactactttgaggtgaa 229  Q
    ||||||||||||||   ||||||||||||| ||||||| |||||||| |||||    
T  54566192 agtgtgtttggatgaaagaatgttttgagggaattcaattactttgatgtgaa 54566244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 239
Target Start/End: Complemental strand, 55266892 - 55266852
Alignment:
Q  199 ttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||||| |||||||||||||| ||||||||| |||||||    
T  55266892 ttttgagggaattcaactactttaaggtgaattttattgtt 55266852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 55; Significance: 1e-22; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 177 - 239
Target Start/End: Original strand, 40853989 - 40854051
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  40853989 agtgtgtttggatgggggaatgttttgagggaattcaactactttaaggtgaattctattgtt 40854051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 177 - 231
Target Start/End: Complemental strand, 19865593 - 19865539
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgaggaaattcaactactttgaggtgaatt 231  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  19865593 agtgtgtttggatgagggaatgttttgaggaaattcaaatactttgaggtgaatt 19865539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 177 - 239
Target Start/End: Complemental strand, 30080840 - 30080778
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    ||||||||||||||||||||||||||||||||||| || |||||| |||||||||| ||||||    
T  30080840 agtgtgtttggatgggggaatgttttgaggaaatttaaatactttcaggtgaattccattgtt 30080778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 177 - 239
Target Start/End: Original strand, 46069406 - 46069473
Alignment:
Q  177 agtgtgtttggatgggggaatg-----ttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    ||||||||||||||||||||||     |||||||| ||||||||||||||||||||||||||||||||    
T  46069406 agtgtgtttggatgggggaatgtaatgttttgagggaattcaactactttgaggtgaattctattgtt 46069473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 177 - 239
Target Start/End: Complemental strand, 30587942 - 30587880
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||||||||||||||||||||||||||| ||||||| |||||| | |||||||| ||||||    
T  30587942 agtgtgtttggatgggggaatgttttgagggaattcaaatactttaatgtgaattccattgtt 30587880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 177 - 239
Target Start/End: Original strand, 32650593 - 32650655
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    ||||||||| ||||| |||||||||||||| ||||||| |||||||||||||||| |||||||    
T  32650593 agtgtgtttcgatggaggaatgttttgagggaattcaaatactttgaggtgaattttattgtt 32650655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 5644715 - 5644759
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||||||||| ||||||||||||||||||||||||||||||||    
T  5644715 aatgttttgagggaattcaactactttgaggtgaattctattgtt 5644759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 29065857 - 29065901
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||||||||| ||||||||||||||||||||||||||||||||    
T  29065857 aatgttttgagggaattcaactactttgaggtgaattctattgtt 29065901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 232
Target Start/End: Complemental strand, 13815033 - 13814978
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgaggaaattcaactactttgaggtgaattc 232  Q
    ||||||||||||| |||||||||||||||| ||||||| |||||||| ||||||||    
T  13815033 agtgtgtttggataggggaatgttttgagggaattcaaatactttgatgtgaattc 13814978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 236
Target Start/End: Original strand, 14790134 - 14790192
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgaggaaattcaactactttgaggtgaattctatt 236  Q
    ||||||||||||||||| |||||||||||| ||||||| |||||||||||||||| ||||    
T  14790134 agtgtgtttggatgggg-aatgttttgagggaattcaaatactttgaggtgaattttatt 14790192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 239
Target Start/End: Original strand, 31913238 - 31913300
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgaggaaattcaactactttgaggtg-aattctattgtt 239  Q
    |||||||||||||||||||||||||||||| |||||||||| ||| ||||| ||||||||||||    
T  31913238 agtgtgtttggatgggggaatgttttgagggaattcaacta-tttaaggtgaaattctattgtt 31913300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 40110775 - 40110819
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||||||||| |||||||||||||| |||||||||||||||||    
T  40110775 aatgttttgagggaattcaactactttaaggtgaattctattgtt 40110819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 49052906 - 49052862
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||||||||| |||||||||||||| |||||||||||||||||    
T  49052906 aatgttttgagggaattcaactactttaaggtgaattctattgtt 49052862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 172 - 206
Target Start/End: Complemental strand, 43955676 - 43955642
Alignment:
Q  172 tttatagtgtgtttggatgggggaatgttttgagg 206  Q
    |||||||||||||||||||||||||||||||||||    
T  43955676 tttatagtgtgtttggatgggggaatgttttgagg 43955642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 195 - 232
Target Start/End: Complemental strand, 40110859 - 40110822
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattc 232  Q
    |||||||||||| |||||||||||||||||||||||||    
T  40110859 aatgttttgagggaattcaactactttgaggtgaattc 40110822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 44915316 - 44915272
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||||||||| |||||||||||| | |||||||||||||||||    
T  44915316 aatgttttgagggaattcaactactctaaggtgaattctattgtt 44915272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 214
Target Start/End: Complemental strand, 31913343 - 31913300
Alignment:
Q  172 tttatagtgtgtttggatgggggaatgttttgagg-aaattcaa 214  Q
    |||| |||||||||||||||||||||||||||||| ||||||||    
T  31913343 tttagagtgtgtttggatgggggaatgttttgaggtaaattcaa 31913300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 239
Target Start/End: Original strand, 40495252 - 40495312
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    ||||||||||||||||| |||||   |||| ||||||| |||||||| |||||||||||||||    
T  40495252 agtgtgtttggatggggaaatgtc--gagggaattcaaatactttgatgtgaattctattgtt 40495312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 239
Target Start/End: Complemental strand, 23548630 - 23548588
Alignment:
Q  197 tgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||||||||||||||| ||||||| ||||||||| ||||||    
T  23548630 tgttttgaggaaattcaaatactttggggtgaattccattgtt 23548588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 206
Target Start/End: Original strand, 35455801 - 35455835
Alignment:
Q  172 tttatagtgtgtttggatgggggaatgttttgagg 206  Q
    |||| ||||||||||||||||||||||||||||||    
T  35455801 tttagagtgtgtttggatgggggaatgttttgagg 35455835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 239
Target Start/End: Original strand, 45984360 - 45984422
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    ||||||||||||||    |||||||| ||| ||||||| ||||||||||||||||| ||||||    
T  45984360 agtgtgtttggatgaaaaaatgttttaagggaattcaaatactttgaggtgaattcaattgtt 45984422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 239
Target Start/End: Original strand, 45988720 - 45988782
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    ||||||||||||||    |||||||| ||| ||||||| ||||||||||||||||| ||||||    
T  45988720 agtgtgtttggatgaaaaaatgttttaagggaattcaaatactttgaggtgaattcaattgtt 45988782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 228
Target Start/End: Original strand, 2057433 - 2057466
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtga 228  Q
    |||||||||||| |||||||||||||||||||||    
T  2057433 aatgttttgagggaattcaactactttgaggtga 2057466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 206
Target Start/End: Complemental strand, 14603319 - 14603290
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgagg 206  Q
    ||||||||||||||||||||||||||||||    
T  14603319 agtgtgtttggatgggggaatgttttgagg 14603290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 206
Target Start/End: Complemental strand, 26162194 - 26162165
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgagg 206  Q
    ||||||||||||||||||||||||||||||    
T  26162194 agtgtgtttggatgggggaatgttttgagg 26162165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 206
Target Start/End: Complemental strand, 28539225 - 28539196
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgagg 206  Q
    ||||||||||||||||||||||||||||||    
T  28539225 agtgtgtttggatgggggaatgttttgagg 28539196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 206
Target Start/End: Original strand, 31632724 - 31632753
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgagg 206  Q
    ||||||||||||||||||||||||||||||    
T  31632724 agtgtgtttggatgggggaatgttttgagg 31632753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 206
Target Start/End: Complemental strand, 34399006 - 34398977
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgagg 206  Q
    ||||||||||||||||||||||||||||||    
T  34399006 agtgtgtttggatgggggaatgttttgagg 34398977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 206
Target Start/End: Complemental strand, 39342699 - 39342670
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgagg 206  Q
    ||||||||||||||||||||||||||||||    
T  39342699 agtgtgtttggatgggggaatgttttgagg 39342670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 206
Target Start/End: Original strand, 40110739 - 40110768
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgagg 206  Q
    ||||||||||||||||||||||||||||||    
T  40110739 agtgtgtttggatgggggaatgttttgagg 40110768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 206
Target Start/End: Original strand, 43955519 - 43955548
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgagg 206  Q
    ||||||||||||||||||||||||||||||    
T  43955519 agtgtgtttggatgggggaatgttttgagg 43955548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 236
Target Start/End: Original strand, 43955555 - 43955596
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattctatt 236  Q
    |||||||||||| |||||||||||||| || |||||||||||    
T  43955555 aatgttttgagggaattcaactactttaagatgaattctatt 43955596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 232
Target Start/End: Original strand, 44915233 - 44915270
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattc 232  Q
    |||||||||| | |||||||||||||||||||||||||    
T  44915233 aatgttttgaaggaattcaactactttgaggtgaattc 44915270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 205
Target Start/End: Original strand, 2057397 - 2057425
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgag 205  Q
    |||||||||||||||||||||||||||||    
T  2057397 agtgtgtttggatgggggaatgttttgag 2057425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 2057516 - 2057472
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||||||||| |||||||||||||  ||||||||| |||||||    
T  2057516 aatgttttgagggaattcaactacttcaaggtgaattttattgtt 2057472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 3905680 - 3905636
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||||| | | ||||||| ||||||||||||||||||||||||    
T  3905680 aatgttttcaaggaattcaaatactttgaggtgaattctattgtt 3905636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 21636006 - 21635962
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||||||| | |||| |||||||||||| ||||||||||||||    
T  21636006 aatgttttgaaggaatttaactactttgagatgaattctattgtt 21635962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 26162158 - 26162114
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||| ||||| ||||||| ||||||||||||||||| ||||||    
T  26162158 aatgttatgagggaattcaaatactttgaggtgaattccattgtt 26162114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 29639236 - 29639192
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||| ||||||||||||| || |||||||||||||| ||||||    
T  29639236 aatgttatgaggaaattcaaatattttgaggtgaattccattgtt 29639192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 31632760 - 31632804
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||| ||||| ||||||| ||||||||||||||||| ||||||    
T  31632760 aatgttatgagggaattcaaatactttgaggtgaattccattgtt 31632804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 220
Target Start/End: Complemental strand, 36328838 - 36328794
Alignment:
Q  176 tagtgtgtttggatgggggaatgttttgaggaaattcaactactt 220  Q
    |||||||||||||||||| |||||||||||  ||||||| |||||    
T  36328838 tagtgtgtttggatggggtaatgttttgagagaattcaaatactt 36328794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 43791128 - 43791172
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||||||||| ||||||| |||||||||||||| || ||||||    
T  43791128 aatgttttgagggaattcaaatactttgaggtgaactccattgtt 43791172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 55; Significance: 1e-22; HSPs: 49)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 177 - 239
Target Start/End: Original strand, 22305114 - 22305176
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||    
T  22305114 agtgtgtttggatgggggaatgttttgagggaattcaactactttgaggtgaattccattgtt 22305176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 177 - 231
Target Start/End: Original strand, 2550330 - 2550384
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgaggaaattcaactactttgaggtgaatt 231  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  2550330 agtgtgtttggatgggggaatgttttgagggaattcaactactttgaggtgaatt 2550384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 177 - 239
Target Start/End: Original strand, 33146193 - 33146255
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||||    
T  33146193 agtgtgtttggatgggggaatgttttgagggaattcaaatactttgaggtgaattccattgtt 33146255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 177 - 239
Target Start/End: Complemental strand, 15270904 - 15270842
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    ||||||||||||||| |||||||||||||| ||||||| ||||||||||||||||| ||||||    
T  15270904 agtgtgtttggatggaggaatgttttgagggaattcaaatactttgaggtgaattccattgtt 15270842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 177 - 239
Target Start/End: Original strand, 28490013 - 28490074
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    ||||||||||||||||||| |||||||||| ||||||| ||||||||||||||||| ||||||    
T  28490013 agtgtgtttggatggggga-tgttttgagggaattcaaatactttgaggtgaattccattgtt 28490074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 183 - 239
Target Start/End: Complemental strand, 17542405 - 17542349
Alignment:
Q  183 tttggatgggggaatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||||||| ||||||||||||| ||||||| ||||||||||||||||| ||||||    
T  17542405 tttggatgggagaatgttttgagggaattcaaatactttgaggtgaattccattgtt 17542349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 179 - 239
Target Start/End: Original strand, 28489485 - 28489545
Alignment:
Q  179 tgtgtttggatgggggaatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    ||||||||||||||||||| |||||||  ||||||| ||||||||||||||||| ||||||    
T  28489485 tgtgtttggatgggggaatattttgagagaattcaaatactttgaggtgaattccattgtt 28489545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 172 - 231
Target Start/End: Original strand, 34105086 - 34105145
Alignment:
Q  172 tttatagtgtgtttggatgggggaatgttttgaggaaattcaactactttgaggtgaatt 231  Q
    |||| ||||||||||||||| ||||||||||||| |||||||| ||||||||| ||||||    
T  34105086 tttagagtgtgtttggatggaggaatgttttgagaaaattcaaatactttgagatgaatt 34105145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 173 - 224
Target Start/End: Original strand, 40643834 - 40643885
Alignment:
Q  173 ttatagtgtgtttggatgggggaatgttttgaggaaattcaactactttgag 224  Q
    ||||||||||||||||||| | |||||||||||| |||||||||||||||||    
T  40643834 ttatagtgtgtttggatggagaaatgttttgagggaattcaactactttgag 40643885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 177 - 231
Target Start/End: Complemental strand, 12064518 - 12064464
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgaggaaattcaactactttgaggtgaatt 231  Q
    ||||||||| |||||||||||||||||||| |||| || ||||||||||||||||    
T  12064518 agtgtgttttgatgggggaatgttttgagggaatttaaatactttgaggtgaatt 12064464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 177 - 230
Target Start/End: Complemental strand, 34982346 - 34982293
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgaggaaattcaactactttgaggtgaat 230  Q
    ||||||||||||||| |||||||||||||| |||||||| ||||| ||||||||    
T  34982346 agtgtgtttggatggaggaatgttttgagggaattcaaccactttaaggtgaat 34982293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 9764376 - 9764420
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||||||||| |||||||||||||| |||||||||||||||||    
T  9764376 aatgttttgagggaattcaactactttaaggtgaattctattgtt 9764420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 20523254 - 20523210
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||||||||| |||||||||||||| |||||||||||||||||    
T  20523254 aatgttttgagggaattcaactactttaaggtgaattctattgtt 20523210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 195 - 237
Target Start/End: Original strand, 3563315 - 3563357
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattctattg 237  Q
    |||||||||||| |||||||||||||| |||||||||||||||    
T  3563315 aatgttttgagggaattcaactactttaaggtgaattctattg 3563357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 195 - 232
Target Start/End: Original strand, 15373998 - 15374035
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattc 232  Q
    |||||||||||| |||||||||||||||||||||||||    
T  15373998 aatgttttgagggaattcaactactttgaggtgaattc 15374035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 195 - 232
Target Start/End: Complemental strand, 32390093 - 32390056
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattc 232  Q
    |||||||||||| |||||||||||||||||||||||||    
T  32390093 aatgttttgagggaattcaactactttgaggtgaattc 32390056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 177 - 214
Target Start/End: Original strand, 33146063 - 33146100
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgaggaaattcaa 214  Q
    |||||||||||||||||||||||||||||| |||||||    
T  33146063 agtgtgtttggatgggggaatgttttgagggaattcaa 33146100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 177 - 210
Target Start/End: Complemental strand, 40090482 - 40090449
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgaggaaat 210  Q
    ||||||||||||||||||||||||||||||||||    
T  40090482 agtgtgtttggatgggggaatgttttgaggaaat 40090449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 15374081 - 15374037
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||||||||| |||||||||||| | |||||||||||||||||    
T  15374081 aatgttttgagggaattcaactactctaaggtgaattctattgtt 15374037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 235
Target Start/End: Complemental strand, 16515139 - 16515099
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattctat 235  Q
    |||||||||||| ||||||||| ||||||||||||||||||    
T  16515139 aatgttttgagggaattcaacttctttgaggtgaattctat 16515099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 22766990 - 22767034
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||||||||| ||||||| |||||| |||||||||||||||||    
T  22766990 aatgttttgagggaattcaaatactttaaggtgaattctattgtt 22767034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 25935322 - 25935278
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||| ||||||||||||| ||||||||||||||||| ||||||    
T  25935322 aatgttatgaggaaattcaaatactttgaggtgaattccattgtt 25935278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 37722926 - 37722882
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||||||||| ||||||| ||||||||||||||||| ||||||    
T  37722926 aatgttttgagggaattcaaatactttgaggtgaattccattgtt 37722882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 195 - 230
Target Start/End: Complemental strand, 2721592 - 2721557
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaat 230  Q
    |||||||||||| |||||||||||||||||||||||    
T  2721592 aatgttttgagggaattcaactactttgaggtgaat 2721557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 206
Target Start/End: Complemental strand, 2721630 - 2721599
Alignment:
Q  175 atagtgtgtttggatgggggaatgttttgagg 206  Q
    ||||||||||||||||||||||||||||||||    
T  2721630 atagtgtgtttggatgggggaatgttttgagg 2721599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 220
Target Start/End: Original strand, 22302541 - 22302584
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgaggaaattcaactactt 220  Q
    ||||||||||||||||| |||||||||||| ||||||| |||||    
T  22302541 agtgtgtttggatggggtaatgttttgagggaattcaaatactt 22302584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 195 - 234
Target Start/End: Complemental strand, 26281301 - 26281262
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattcta 234  Q
    |||||||||||| |||||||||||||| ||||||||||||    
T  26281301 aatgttttgagggaattcaactactttaaggtgaattcta 26281262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 206
Target Start/End: Complemental strand, 13243566 - 13243532
Alignment:
Q  172 tttatagtgtgtttggatgggggaatgttttgagg 206  Q
    |||||||||||||||||||||||||| ||||||||    
T  13243566 tttatagtgtgtttggatgggggaatattttgagg 13243532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 206
Target Start/End: Original strand, 22766949 - 22766983
Alignment:
Q  172 tttatagtgtgtttggatgggggaatgttttgagg 206  Q
    |||| ||||||||||||||||||||||||||||||    
T  22766949 tttagagtgtgtttggatgggggaatgttttgagg 22766983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 206
Target Start/End: Original strand, 2316380 - 2316409
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgagg 206  Q
    ||||||||||||||||||||||||||||||    
T  2316380 agtgtgtttggatgggggaatgttttgagg 2316409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 232
Target Start/End: Complemental strand, 2316500 - 2316463
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattc 232  Q
    |||||||||||  |||||||||||||||||||||||||    
T  2316500 aatgttttgagagaattcaactactttgaggtgaattc 2316463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 210 - 239
Target Start/End: Complemental strand, 6634120 - 6634091
Alignment:
Q  210 ttcaactactttgaggtgaattctattgtt 239  Q
    ||||||||||||||||||||||||||||||    
T  6634120 ttcaactactttgaggtgaattctattgtt 6634091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 228
Target Start/End: Complemental strand, 9764459 - 9764426
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtga 228  Q
    |||||||||||| |||||||||||||||||||||    
T  9764459 aatgttttgagggaattcaactactttgaggtga 9764426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Original strand, 12479948 - 12479981
Alignment:
Q  198 gttttgaggaaattcaactactttgaggtgaatt 231  Q
    ||||||||||||||||| ||||||||||||||||    
T  12479948 gttttgaggaaattcaaatactttgaggtgaatt 12479981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 206
Target Start/End: Complemental strand, 15374117 - 15374088
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgagg 206  Q
    ||||||||||||||||||||||||||||||    
T  15374117 agtgtgtttggatgggggaatgttttgagg 15374088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 206
Target Start/End: Original strand, 15804324 - 15804353
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgagg 206  Q
    ||||||||||||||||||||||||||||||    
T  15804324 agtgtgtttggatgggggaatgttttgagg 15804353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 206
Target Start/End: Complemental strand, 22303938 - 22303909
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgagg 206  Q
    ||||||||||||||||||||||||||||||    
T  22303938 agtgtgtttggatgggggaatgttttgagg 22303909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 206
Target Start/End: Complemental strand, 25935358 - 25935329
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgagg 206  Q
    ||||||||||||||||||||||||||||||    
T  25935358 agtgtgtttggatgggggaatgttttgagg 25935329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 206
Target Start/End: Original strand, 28828369 - 28828398
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgagg 206  Q
    ||||||||||||||||||||||||||||||    
T  28828369 agtgtgtttggatgggggaatgttttgagg 28828398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 232
Target Start/End: Complemental strand, 32471003 - 32470966
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattc 232  Q
    |||||||||||| ||||||||||||||||| |||||||    
T  32471003 aatgttttgagggaattcaactactttgagttgaattc 32470966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 206
Target Start/End: Complemental strand, 40643974 - 40643945
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgagg 206  Q
    ||||||||||||||||||||||||||||||    
T  40643974 agtgtgtttggatgggggaatgttttgagg 40643945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 232
Target Start/End: Original strand, 40809379 - 40809416
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattc 232  Q
    |||||||||||| ||||||||||||||||| |||||||    
T  40809379 aatgttttgagggaattcaactactttgagttgaattc 40809416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 206
Target Start/End: Complemental strand, 41762283 - 41762254
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgagg 206  Q
    ||||||||||||||||||||||||||||||    
T  41762283 agtgtgtttggatgggggaatgttttgagg 41762254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 198 - 234
Target Start/End: Original strand, 16515045 - 16515081
Alignment:
Q  198 gttttgaggaaattcaactactttgaggtgaattcta 234  Q
    ||||||||| ||||||||| |||||||||||||||||    
T  16515045 gttttgagggaattcaacttctttgaggtgaattcta 16515081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 206
Target Start/End: Complemental strand, 19533978 - 19533946
Alignment:
Q  174 tatagtgtgtttggatgggggaatgttttgagg 206  Q
    |||||||||||||||||| ||||||||||||||    
T  19533978 tatagtgtgtttggatggaggaatgttttgagg 19533946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 205
Target Start/End: Complemental strand, 20523290 - 20523262
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgag 205  Q
    |||||||||||||||||||||||||||||    
T  20523290 agtgtgtttggatgggggaatgttttgag 20523262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 239
Target Start/End: Complemental strand, 37241157 - 37241098
Alignment:
Q  179 tgtgtttggatgggggaatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||||||||| || |||||||| ||| |||| || ||||||||||||||||| ||||||    
T  37241157 tgtgtttggatgtgg-aatgttttcagggaattgaaatactttgaggtgaattccattgtt 37241098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 40090446 - 40090402
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||||||| | ||||||| ||||||||||||||||| ||||||    
T  40090446 aatgttttgatggaattcaaatactttgaggtgaattccattgtt 40090402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 40643938 - 40643895
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||||||||| |||||||||| ||| |||||||||||||||||    
T  40643938 aatgttttgagggaattcaacta-tttaaggtgaattctattgtt 40643895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 55; Significance: 1e-22; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 177 - 239
Target Start/End: Original strand, 46429416 - 46429478
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  46429416 agtgtgtttggatgggggaatgttttgagggaattcaactactttaaggtgaattctattgtt 46429478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 177 - 239
Target Start/End: Complemental strand, 332114 - 332052
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||||||||||||  ||||||||||||| |||||||||||||| |||||||||||||||||    
T  332114 agtgtgtttggatggaagaatgttttgagggaattcaactactttaaggtgaattctattgtt 332052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 179 - 239
Target Start/End: Original strand, 27251916 - 27251976
Alignment:
Q  179 tgtgtttggatgggggaatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||||||||||||||||||||| ||| |||||||||||||| || ||||||||||||||    
T  27251916 tgtgtttggatgggggaatgttttaagggaattcaactactttaagttgaattctattgtt 27251976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 177 - 225
Target Start/End: Original strand, 27485474 - 27485522
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgaggaaattcaactactttgagg 225  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  27485474 agtgtgtttggatgggggaatgttttgagggaattcaactactttgagg 27485522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 177 - 232
Target Start/End: Original strand, 25655317 - 25655372
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgaggaaattcaactactttgaggtgaattc 232  Q
    ||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||    
T  25655317 agtgtgtttggatggggaaatgttttgagggaattcaactactttgagttgaattc 25655372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 177 - 239
Target Start/End: Original strand, 2104754 - 2104816
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    ||||||||||||| ||||||||||| |||| ||||||| |||||||| |||||||||||||||    
T  2104754 agtgtgtttggataggggaatgtttcgagggaattcaaatactttgatgtgaattctattgtt 2104816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 177 - 239
Target Start/End: Complemental strand, 28092353 - 28092291
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||||||  ||||||||||||||||||| |||||||||  |||||||||||||||||||||    
T  28092353 agtgtgtttaaatgggggaatgttttgagggaattcaactgttttgaggtgaattctattgtt 28092291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 331990 - 332049
Alignment:
Q  172 tttatagtgtgtttggatgggggaatgttttgaggaaattcaactactttgaggtgaattc 232  Q
    |||| ||||||||||||||| | |||||||||||| |||||||||||||||||||||||||    
T  331990 tttagagtgtgtttggatggag-aatgttttgagggaattcaactactttgaggtgaattc 332049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 31070444 - 31070488
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||||||||| ||||||||||||||||||||||||||||||||    
T  31070444 aatgttttgagggaattcaactactttgaggtgaattctattgtt 31070488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 236
Target Start/End: Complemental strand, 25655436 - 25655377
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgaggaaattcaactactttgaggtgaattctatt 236  Q
    ||||||||||||||||| |||||||||| | |||||||||||||| || |||||||||||    
T  25655436 agtgtgtttggatggggaaatgttttgacggaattcaactactttaagttgaattctatt 25655377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 177 - 239
Target Start/End: Complemental strand, 38506928 - 38506866
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    ||||||||||||| | |||||||||||||| ||||||| || |||||||||||||| ||||||    
T  38506928 agtgtgtttggatagaggaatgttttgagggaattcaaataatttgaggtgaattccattgtt 38506866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 177 - 239
Target Start/End: Complemental strand, 54761616 - 54761554
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    ||||||||||||||| |||||||||||||| ||||||| |||||||| || ||||| ||||||    
T  54761616 agtgtgtttggatggaggaatgttttgagggaattcaaatactttgatgtaaattccattgtt 54761554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 44436296 - 44436340
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||    
T  44436296 aatgttttgaggaaattcaactattttaaggtgaattctattgtt 44436340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 177 - 231
Target Start/End: Complemental strand, 9007507 - 9007453
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgaggaaattcaactactttgaggtgaatt 231  Q
    ||||||||||||||||||||||||||||   ||||||| |||||| |||||||||    
T  9007507 agtgtgtttggatgggggaatgttttgaacgaattcaaatacttttaggtgaatt 9007453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 177 - 239
Target Start/End: Original strand, 39215859 - 39215920
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    ||||||||||||||||| ||| |||| ||| ||||||| |||||||||||||||| |||||||    
T  39215859 agtgtgtttggatgggg-aatatttttagggaattcaattactttgaggtgaattttattgtt 39215920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 195 - 233
Target Start/End: Complemental strand, 46672837 - 46672799
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattct 233  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  46672837 aatgttttgagggaattcaactactttgaggtgaattct 46672799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 177 - 239
Target Start/End: Complemental strand, 47284255 - 47284193
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||||||||||| |||||| |||||||| ||||||| ||||||||  ||||||| ||||||    
T  47284255 agtgtgtttggatgagggaatattttgagggaattcaaatactttgatatgaattccattgtt 47284193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 195 - 232
Target Start/End: Complemental strand, 9129465 - 9129428
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattc 232  Q
    |||||||||||| |||||||||||||||||||||||||    
T  9129465 aatgttttgagggaattcaactactttgaggtgaattc 9129428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 195 - 232
Target Start/End: Complemental strand, 9137572 - 9137535
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattc 232  Q
    |||||||||||| |||||||||||||||||||||||||    
T  9137572 aatgttttgagggaattcaactactttgaggtgaattc 9137535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 195 - 232
Target Start/End: Complemental strand, 27252015 - 27251978
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattc 232  Q
    |||||||||||| |||||||||||||||||||||||||    
T  27252015 aatgttttgagggaattcaactactttgaggtgaattc 27251978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 195 - 232
Target Start/End: Original strand, 37321588 - 37321625
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattc 232  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  37321588 aatgttttgaggaaattcaactactttaaggtgaattc 37321625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 195 - 232
Target Start/End: Complemental strand, 44436379 - 44436342
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattc 232  Q
    |||||||||||| |||||||||||||||||||||||||    
T  44436379 aatgttttgagggaattcaactactttgaggtgaattc 44436342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 195 - 232
Target Start/End: Complemental strand, 44692943 - 44692906
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattc 232  Q
    |||||||||||| |||||||||||||||||||||||||    
T  44692943 aatgttttgagggaattcaactactttgaggtgaattc 44692906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 5415904 - 5415860
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||||||| | |||||||||||||| |||||||||||||||||    
T  5415904 aatgttttgatggaattcaactactttaaggtgaattctattgtt 5415860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 21307566 - 21307522
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||||||||| ||||||| ||||||||||||||||| ||||||    
T  21307566 aatgttttgagggaattcaaatactttgaggtgaattccattgtt 21307522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 44692860 - 44692904
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||||||||| |||||||| ||||| |||||||||||||||||    
T  44692860 aatgttttgagggaattcaaccactttaaggtgaattctattgtt 44692904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 199 - 239
Target Start/End: Original strand, 47284268 - 47284308
Alignment:
Q  199 ttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||||| |||||| |||||||||||||||||||||||||    
T  47284268 ttttgagggaattcagctactttgaggtgaattctattgtt 47284308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 206
Target Start/End: Complemental strand, 46672878 - 46672844
Alignment:
Q  172 tttatagtgtgtttggatgggggaatgttttgagg 206  Q
    |||| ||||||||||||||||||||||||||||||    
T  46672878 tttagagtgtgtttggatgggggaatgttttgagg 46672844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 237
Target Start/End: Original strand, 49457381 - 49457423
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattctattg 237  Q
    |||||||||||| |||||||| ||||| |||||||||||||||    
T  49457381 aatgttttgagggaattcaaccactttaaggtgaattctattg 49457423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 181 - 210
Target Start/End: Original strand, 28092220 - 28092249
Alignment:
Q  181 tgtttggatgggggaatgttttgaggaaat 210  Q
    ||||||||||||||||||||||||||||||    
T  28092220 tgtttggatgggggaatgttttgaggaaat 28092249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 206
Target Start/End: Complemental strand, 36398059 - 36398030
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgagg 206  Q
    ||||||||||||||||||||||||||||||    
T  36398059 agtgtgtttggatgggggaatgttttgagg 36398030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 206
Target Start/End: Complemental strand, 42006023 - 42005994
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgagg 206  Q
    ||||||||||||||||||||||||||||||    
T  42006023 agtgtgtttggatgggggaatgttttgagg 42005994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 206
Target Start/End: Original strand, 44436260 - 44436289
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgagg 206  Q
    ||||||||||||||||||||||||||||||    
T  44436260 agtgtgtttggatgggggaatgttttgagg 44436289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 206
Target Start/End: Original strand, 44692824 - 44692853
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgagg 206  Q
    ||||||||||||||||||||||||||||||    
T  44692824 agtgtgtttggatgggggaatgttttgagg 44692853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 206
Target Start/End: Original strand, 47767434 - 47767463
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgagg 206  Q
    ||||||||||||||||||||||||||||||    
T  47767434 agtgtgtttggatgggggaatgttttgagg 47767463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 206
Target Start/End: Original strand, 49457345 - 49457374
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgagg 206  Q
    ||||||||||||||||||||||||||||||    
T  49457345 agtgtgtttggatgggggaatgttttgagg 49457374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 9129382 - 9129426
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||||||| | |||||||||||||| || ||||||||||||||    
T  9129382 aatgttttgatggaattcaactactttaagttgaattctattgtt 9129426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 9137489 - 9137533
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||||||| | |||||||||||||| || ||||||||||||||    
T  9137489 aatgttttgatggaattcaactactttaagttgaattctattgtt 9137533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 19475854 - 19475898
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||| ||||| ||||||| ||||||||||||||||| ||||||    
T  19475854 aatgttatgaggtaattcaaatactttgaggtgaattccattgtt 19475898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 196 - 232
Target Start/End: Original strand, 28092253 - 28092289
Alignment:
Q  196 atgttttgaggaaattcaactactttgaggtgaattc 232  Q
    ||||||||||| ||||||| |||||||||||||||||    
T  28092253 atgttttgagggaattcaattactttgaggtgaattc 28092289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 213
Target Start/End: Complemental strand, 37321655 - 37321619
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgaggaaattca 213  Q
    ||||||||||||| |||||||||||||||| ||||||    
T  37321655 agtgtgtttggattggggaatgttttgagggaattca 37321619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 55; Significance: 1e-22; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 177 - 239
Target Start/End: Complemental strand, 14537338 - 14537276
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  14537338 agtgtgtttggatgggggaatgttttgagggaattcaactactttaaggtgaattctattgtt 14537276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 177 - 239
Target Start/End: Original strand, 3345765 - 3345827
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||||||||    
T  3345765 agtgtgtttggatgggggaatgttttgagggaattcaactactttaaggtaaattctattgtt 3345827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 177 - 239
Target Start/End: Complemental strand, 11824819 - 11824757
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||    
T  11824819 agtgtgtttggatgggggaatgttttgagggaattcaactactttaaggtgaattatattgtt 11824757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 175 - 239
Target Start/End: Original strand, 11607239 - 11607303
Alignment:
Q  175 atagtgtgtttggatgggggaatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    ||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||||| ||||||    
T  11607239 atagtgtgtttggatggggtaatgttttgagggaattcaaatactttgaggtgaattccattgtt 11607303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 177 - 232
Target Start/End: Complemental strand, 11684729 - 11684674
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgaggaaattcaactactttgaggtgaattc 232  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  11684729 agtgtgtttggatggaggaatgttttgagggaattcaactactttgaggtgaattc 11684674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 177 - 239
Target Start/End: Complemental strand, 8736494 - 8736432
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||||||||||| ||||||||||||||| ||||||| ||||||||||||||||| ||||||    
T  8736494 agtgtgtttggatgagggaatgttttgagggaattcaaatactttgaggtgaattccattgtt 8736432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 175 - 239
Target Start/End: Original strand, 11595337 - 11595401
Alignment:
Q  175 atagtgtgtttggatgggggaatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    ||||||||||||||||||| |||||||||||| ||||||| || |||||||||||||| ||||||    
T  11595337 atagtgtgtttggatggggtaatgttttgagggaattcaaatattttgaggtgaattccattgtt 11595401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 27033528 - 27033572
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||||||||| ||||||||||||||||||||||||||||||||    
T  27033528 aatgttttgagggaattcaactactttgaggtgaattctattgtt 27033572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 181 - 232
Target Start/End: Original strand, 11824704 - 11824755
Alignment:
Q  181 tgtttggatgggggaatgttttgaggaaattcaactactttgaggtgaattc 232  Q
    ||||||||||| |||||||||||||| ||||||||||||||||| |||||||    
T  11824704 tgtttggatggaggaatgttttgagggaattcaactactttgagatgaattc 11824755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 172 - 239
Target Start/End: Original strand, 20935722 - 20935788
Alignment:
Q  172 tttatagtgtgtttggatgggggaatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||| ||||||||||||||||| |||||||||||| ||||||| |||||||| |||||||| ||||||    
T  20935722 tttagagtgtgtttggatgggg-aatgttttgagggaattcaaatactttgatgtgaattccattgtt 20935788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 177 - 239
Target Start/End: Original strand, 21504470 - 21504532
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    ||||||||||||| |||||||||||||||| ||||||| || |||||| ||||||| ||||||    
T  21504470 agtgtgtttggatcggggaatgttttgagggaattcaaatattttgagatgaattccattgtt 21504532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 180 - 232
Target Start/End: Complemental strand, 3345882 - 3345829
Alignment:
Q  180 gtgtttggatgggggaatgttttgaggaaattcaac-tactttgaggtgaattc 232  Q
    |||||||||||||| |||||||||||| |||||||| |||||||||||||||||    
T  3345882 gtgtttggatggggaaatgttttgagggaattcaacgtactttgaggtgaattc 3345829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 784914 - 784870
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||||||||| |||||||||||||| |||||||||||||||||    
T  784914 aatgttttgagggaattcaactactttaaggtgaattctattgtt 784870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 14954388 - 14954344
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||||||||| |||||||||||||| |||||||||||||||||    
T  14954388 aatgttttgagggaattcaactactttaaggtgaattctattgtt 14954344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 40026102 - 40026146
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    ||||||||||||||||| || ||||||||||||||||||||||||    
T  40026102 aatgttttgaggaaatttaaatactttgaggtgaattctattgtt 40026146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 41461636 - 41461592
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||||||||| |||||||||| |||||||||||||||||||||    
T  41461636 aatgttttgagggaattcaactattttgaggtgaattctattgtt 41461592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 10244316 - 10244265
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgaggaaattcaactactttgaggtga 228  Q
    ||||| |||| ||||||||||||||| ||| |||||||||||||||||||||    
T  10244316 agtgtatttgaatgggggaatgttttaagggaattcaactactttgaggtga 10244265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 236
Target Start/End: Complemental strand, 44205711 - 44205652
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgaggaaattcaactactttgaggtgaattctatt 236  Q
    ||||||||||||||||| |||||||||||| ||||||| |||||| | || |||||||||    
T  44205711 agtgtgtttggatggggaaatgttttgagggaattcaaatacttttatgtaaattctatt 44205652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 177 - 239
Target Start/End: Complemental strand, 41585743 - 41585681
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    ||||||||||||||| | |||||||||||| ||||||| |||||||| ||||| | |||||||    
T  41585743 agtgtgtttggatggtgaaatgttttgagggaattcaaatactttgaagtgaaatttattgtt 41585681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 195 - 232
Target Start/End: Original strand, 11716446 - 11716483
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattc 232  Q
    |||||||||||| |||||||||||||||||||||||||    
T  11716446 aatgttttgagggaattcaactactttgaggtgaattc 11716483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 195 - 232
Target Start/End: Original strand, 14365738 - 14365775
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattc 232  Q
    |||||||||||| |||||||||||||||||||||||||    
T  14365738 aatgttttgagggaattcaactactttgaggtgaattc 14365775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 195 - 232
Target Start/End: Original strand, 14537237 - 14537274
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattc 232  Q
    |||||||||||| |||||||||||||||||||||||||    
T  14537237 aatgttttgaggtaattcaactactttgaggtgaattc 14537274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 177 - 210
Target Start/End: Complemental strand, 35047750 - 35047717
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgaggaaat 210  Q
    ||||||||||||||||||||||||||||||||||    
T  35047750 agtgtgtttggatgggggaatgttttgaggaaat 35047717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 11532288 - 11532244
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||||||||| ||||||| ||||||||||||||||| ||||||    
T  11532288 aatgttttgagggaattcaaatactttgaggtgaattccattgtt 11532244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 179 - 214
Target Start/End: Complemental strand, 19231336 - 19231301
Alignment:
Q  179 tgtgtttggatgggggaatgttttgaggaaattcaa 214  Q
    |||||||||||||||||||||||||||| |||||||    
T  19231336 tgtgtttggatgggggaatgttttgagggaattcaa 19231301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 231
Target Start/End: Complemental strand, 32840241 - 32840191
Alignment:
Q  181 tgtttggatgggggaatgttttgaggaaattcaactactttgaggtgaatt 231  Q
    |||||||||| || |||||||||||| |||| || ||||||||||||||||    
T  32840241 tgtttggatgaggaaatgttttgagggaatttaaatactttgaggtgaatt 32840191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 206
Target Start/End: Original strand, 769038 - 769067
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgagg 206  Q
    ||||||||||||||||||||||||||||||    
T  769038 agtgtgtttggatgggggaatgttttgagg 769067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 206
Target Start/End: Complemental strand, 1583880 - 1583851
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgagg 206  Q
    ||||||||||||||||||||||||||||||    
T  1583880 agtgtgtttggatgggggaatgttttgagg 1583851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 206
Target Start/End: Original strand, 10480121 - 10480150
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgagg 206  Q
    ||||||||||||||||||||||||||||||    
T  10480121 agtgtgtttggatgggggaatgttttgagg 10480150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 206
Target Start/End: Original strand, 11141307 - 11141336
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgagg 206  Q
    ||||||||||||||||||||||||||||||    
T  11141307 agtgtgtttggatgggggaatgttttgagg 11141336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 206
Target Start/End: Original strand, 14365702 - 14365731
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgagg 206  Q
    ||||||||||||||||||||||||||||||    
T  14365702 agtgtgtttggatgggggaatgttttgagg 14365731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 14365820 - 14365778
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||||||||| ||||||||||||||  ||||||||||||||||    
T  14365820 aatgttttgagggaattcaactacttt--ggtgaattctattgtt 14365778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 206
Target Start/End: Original strand, 14537201 - 14537230
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgagg 206  Q
    ||||||||||||||||||||||||||||||    
T  14537201 agtgtgtttggatgggggaatgttttgagg 14537230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 206
Target Start/End: Complemental strand, 33189328 - 33189299
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgagg 206  Q
    ||||||||||||||||||||||||||||||    
T  33189328 agtgtgtttggatgggggaatgttttgagg 33189299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 206
Target Start/End: Complemental strand, 41461672 - 41461643
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgagg 206  Q
    ||||||||||||||||||||||||||||||    
T  41461672 agtgtgtttggatgggggaatgttttgagg 41461643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 10244215 - 10244259
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||||||||| |||||||||||||  ||||||||| |||||||    
T  10244215 aatgttttgagggaattcaactacttcaaggtgaattttattgtt 10244259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 206
Target Start/End: Original strand, 11793894 - 11793926
Alignment:
Q  174 tatagtgtgtttggatgggggaatgttttgagg 206  Q
    |||||||||||||||||||||||| ||||||||    
T  11793894 tatagtgtgtttggatgggggaatattttgagg 11793926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 11793933 - 11793977
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||| ||||| ||||||| ||||||||||||||||| ||||||    
T  11793933 aatgttatgagggaattcaaatactttgaggtgaattccattgtt 11793977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 205
Target Start/End: Original strand, 27033492 - 27033520
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgag 205  Q
    |||||||||||||||||||||||||||||    
T  27033492 agtgtgtttggatgggggaatgttttgag 27033520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 32839683 - 32839639
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||||||||| ||||||| |||||||| |||||||| ||||||    
T  32839683 aatgttttgagggaattcaaatactttgacgtgaattccattgtt 32839639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 54; Significance: 4e-22; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 21 - 171
Target Start/End: Original strand, 4221536 - 4221683
Alignment:
Q  21 tgaagatctaagttgaagatggttttgagtttttgggttgaaaatgaagataaagaaagtatataaattctgaattttgannnnnnngaattctaagtat 120  Q
    ||||||||||| ||||||||||||  ||||||||||||||||||||||||||||||| ||||| ||| | ||||||||||       ||||||| |||||    
T  4221536 tgaagatctaaattgaagatggtt--gagtttttgggttgaaaatgaagataaagaatgtataaaaaatttgaattttga-ttttttgaattctgagtat 4221632  T
Q  121 gaataggaaaatttctggacaatatgtgtaatgttggaaaaaataaaggaa 171  Q
    ||||| |||| ||| ||||||| ||| ||||| ||||| || | |||||||    
T  4221633 gaatatgaaattttttggacaagatgagtaatattggagaagacaaaggaa 4221683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 177 - 239
Target Start/End: Original strand, 34008801 - 34008863
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||||    
T  34008801 agtgtgtttggatgggggaatgttttgagggaattcaaatactttgaggtgaattccattgtt 34008863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 177 - 231
Target Start/End: Original strand, 29611390 - 29611444
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgaggaaattcaactactttgaggtgaatt 231  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  29611390 agtgtgtttggatgggggaatgttttgagggaattcaaatactttgaggtgaatt 29611444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 177 - 239
Target Start/End: Complemental strand, 30444996 - 30444934
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    ||||||||||||||| |||||||||||||| ||||||| ||||||||||||||||| ||||||    
T  30444996 agtgtgtttggatggaggaatgttttgagggaattcaaatactttgaggtgaattccattgtt 30444934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 177 - 239
Target Start/End: Original strand, 42739951 - 42740013
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||| |||||| |||||||    
T  42739951 agtgtgtttggatggaggaatgttttgagggaattcaactactttgagatgaattttattgtt 42740013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 178 - 239
Target Start/End: Complemental strand, 26520501 - 26520440
Alignment:
Q  178 gtgtgtttggatgggggaatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    ||||||||||||| ||||||||||||||| ||||||| ||||||||||||||||| ||||||    
T  26520501 gtgtgtttggatgagggaatgttttgagggaattcaaatactttgaggtgaattccattgtt 26520440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 177 - 230
Target Start/End: Original strand, 42711306 - 42711359
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgaggaaattcaactactttgaggtgaat 230  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| |||||    
T  42711306 agtgtgtttggatggggaaatgttttgaggaaattcaactactttgagttgaat 42711359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 3853654 - 3853698
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  3853654 aatgttttgaggaaattcaactactttgaggtgaattctattgtt 3853698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 3858112 - 3858156
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  3858112 aatgttttgaggaaattcaactactttgaggtgaattctattgtt 3858156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 177 - 239
Target Start/End: Complemental strand, 38573539 - 38573472
Alignment:
Q  177 agtgtgtttggatgggggaatgt-----tttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||||||||||||||||||||     ||||||||||||||||||||||||| ||||||||||||||    
T  38573539 agtgtgtttggatgggggaatgtagtgttttgaggaaattcaactactttgagttgaattctattgtt 38573472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 177 - 231
Target Start/End: Original strand, 7202867 - 7202921
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgaggaaattcaactactttgaggtgaatt 231  Q
    |||||||||||||||  ||||||||||||| ||||||||||||||||||||||||    
T  7202867 agtgtgtttggatggatgaatgttttgagggaattcaactactttgaggtgaatt 7202921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 177 - 239
Target Start/End: Complemental strand, 30435383 - 30435322
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    ||||||||||||||||| |||||||||||| |||||||||| ||| |||| ||||||||||||    
T  30435383 agtgtgtttggatggggaaatgttttgagggaattcaacta-tttaaggtaaattctattgtt 30435322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 177 - 221
Target Start/End: Complemental strand, 7202967 - 7202923
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgaggaaattcaactacttt 221  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||    
T  7202967 agtgtgtttggatggaggaatgttttgagggaattcaactacttt 7202923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 17110990 - 17110946
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||||||||| |||||||||||||| |||||||||||||||||    
T  17110990 aatgttttgagggaattcaactactttaaggtgaattctattgtt 17110946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 14799981 - 14800031
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgaggaaattcaactactttgaggtga 228  Q
    |||||||||||||||||||||||||||||| |||| ||||| ||||||||||    
T  14799981 agtgtgtttggatgggggaatgttttgagggaattaaacta-tttgaggtga 14800031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 173 - 232
Target Start/End: Original strand, 38573412 - 38573470
Alignment:
Q  173 ttatagtgtgtttggatgggggaatgttttgaggaaattcaactactttgaggtgaattc 232  Q
    ||||||| ||||||||||||  ||||||||||||||||||||||||||| || |||||||    
T  38573412 ttatagtatgtttggatggga-aatgttttgaggaaattcaactacttttagttgaattc 38573470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 234
Target Start/End: Complemental strand, 42740074 - 42740013
Alignment:
Q  173 ttatagtgtgtttggatgggggaatgttttgaggaaattcaactactttgaggtgaattcta 234  Q
    ||||| ||||||||||||||| ||| |||||||| ||||||| || ||||||||| ||||||    
T  42740074 ttataatgtgtttggatggggaaatattttgagggaattcaattattttgaggtggattcta 42740013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 4156288 - 4156244
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||||||||| |||||||||||||| || ||||||||||||||    
T  4156288 aatgttttgagggaattcaactactttaagatgaattctattgtt 4156244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 13404948 - 13404904
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||||||||| ||||||||||||||||| |||||| |||||||    
T  13404948 aatgttttgagggaattcaactactttgagatgaattttattgtt 13404904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 239
Target Start/End: Complemental strand, 24510345 - 24510278
Alignment:
Q  172 tttatagtgtgtttggatgggggaatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    ||||||||||||||||||| | |||||||||||||  ||| || || ||||||||||| || ||||||    
T  24510345 tttatagtgtgtttggatgagagaatgttttgaggggatttaagtattttgaggtgaactccattgtt 24510278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 239
Target Start/End: Original strand, 8469517 - 8469579
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||||||||| | ||||||||||||||| ||||||| | || | |||||||||| ||||||    
T  8469517 agtgtgtttggacgagggaatgttttgagggaattcaagtcctattaggtgaattccattgtt 8469579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 206
Target Start/End: Complemental strand, 29482889 - 29482859
Alignment:
Q  176 tagtgtgtttggatgggggaatgttttgagg 206  Q
    |||||||||||||||||||||||||||||||    
T  29482889 tagtgtgtttggatgggggaatgttttgagg 29482859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 239
Target Start/End: Original strand, 34388528 - 34388589
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||||||||||||||||||||||||||    ||||| || |||||||||||||| ||||||    
T  34388528 agtgtgtttggatgggggaatgttttgagagggttcaaata-tttgaggtgaattccattgtt 34388589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 206
Target Start/End: Original strand, 3853618 - 3853647
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgagg 206  Q
    ||||||||||||||||||||||||||||||    
T  3853618 agtgtgtttggatgggggaatgttttgagg 3853647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 206
Target Start/End: Original strand, 3858076 - 3858105
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgagg 206  Q
    ||||||||||||||||||||||||||||||    
T  3858076 agtgtgtttggatgggggaatgttttgagg 3858105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 206
Target Start/End: Original strand, 14991694 - 14991723
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgagg 206  Q
    ||||||||||||||||||||||||||||||    
T  14991694 agtgtgtttggatgggggaatgttttgagg 14991723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 232
Target Start/End: Original strand, 17110907 - 17110944
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattc 232  Q
    |||||||||||| ||||||||||||||||| |||||||    
T  17110907 aatgttttgagggaattcaactactttgagttgaattc 17110944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 206
Target Start/End: Complemental strand, 29257432 - 29257403
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgagg 206  Q
    ||||||||||||||||||||||||||||||    
T  29257432 agtgtgtttggatgggggaatgttttgagg 29257403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 232
Target Start/End: Original strand, 32626029 - 32626066
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattc 232  Q
    |||||||||||| |||||||||||||| ||||||||||    
T  32626029 aatgttttgagggaattcaactactttaaggtgaattc 32626066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 206
Target Start/End: Complemental strand, 33377378 - 33377349
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgagg 206  Q
    ||||||||||||||||||||||||||||||    
T  33377378 agtgtgtttggatgggggaatgttttgagg 33377349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 33902705 - 33902747
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||||||||| ||||||||||||||  ||||||||||||||||    
T  33902705 aatgttttgagggaattcaactacttt--ggtgaattctattgtt 33902747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 232
Target Start/End: Complemental strand, 42711401 - 42711364
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattc 232  Q
    |||||||||||| ||||||||||||||||| |||||||    
T  42711401 aatgttttgagggaattcaactactttgagttgaattc 42711364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 13144621 - 13144665
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||| ||||| ||||||| ||||||||||||||||| ||||||    
T  13144621 aatgttatgagggaattcaaatactttgaggtgaattccattgtt 13144665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 14800081 - 14800037
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||||||||| |||||||||||||  ||||||||| |||||||    
T  14800081 aatgttttgagggaattcaactacttcaaggtgaattttattgtt 14800037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 15186862 - 15186818
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    ||||||||||| |||||||| || ||| |||||||||||||||||    
T  15186862 aatgttttgagtaaattcaaatagtttaaggtgaattctattgtt 15186818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 23011772 - 23011816
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||| ||||| ||||||| ||||||||||||||||| ||||||    
T  23011772 aatgttatgagggaattcaaatactttgaggtgaattccattgtt 23011816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 231
Target Start/End: Complemental strand, 35404783 - 35404751
Alignment:
Q  199 ttttgaggaaattcaactactttgaggtgaatt 231  Q
    |||||||||||||||| ||||||||||||||||    
T  35404783 ttttgaggaaattcaaatactttgaggtgaatt 35404751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 44889392 - 44889436
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||||||||| ||||||| |||||||| |||||||| ||||||    
T  44889392 aatgttttgagggaattcaaatactttgatgtgaattccattgtt 44889436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 177 - 239
Target Start/End: Complemental strand, 17638 - 17576
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||||||||||||||||||||||||||| ||||||||| |||||||||| ||| |||||||    
T  17638 agtgtgtttggatgggggaatgttttgagggaattcaactcctttgaggtgcattttattgtt 17576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 6e-18; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 177 - 239
Target Start/End: Original strand, 1195353 - 1195415
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||||||||||||||||||||||||||| | ||||| ||||||||||||||||| ||||||    
T  1195353 agtgtgtttggatgggggaatgttttgagggatttcaaatactttgaggtgaattccattgtt 1195415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 776201 - 776157
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    ||||||||||||||||||||||||||| |||||||||||||||||    
T  776201 aatgttttgaggaaattcaactactttaaggtgaattctattgtt 776157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 9763050 - 9763094
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||||||||| ||||||||||||||||||||||||||||||||    
T  9763050 aatgttttgagggaattcaactactttgaggtgaattctattgtt 9763094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 232
Target Start/End: Complemental strand, 9285786 - 9285731
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgaggaaattcaactactttgaggtgaattc 232  Q
    ||||||||| |||| ||||||||||||||| ||||||||||||||||| |||||||    
T  9285786 agtgtgtttagatgagggaatgttttgagggaattcaactactttgagatgaattc 9285731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 177 - 239
Target Start/End: Original strand, 8475181 - 8475243
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    ||||||||||||||||| |||||||||||| ||||||| ||||||  ||||||||| ||||||    
T  8475181 agtgtgtttggatggggaaatgttttgagggaattcaaatacttttgggtgaattccattgtt 8475243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 9285685 - 9285729
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||    
T  9285685 aatgttttgagggaattcaactactttgagctgaattctattgtt 9285729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 195 - 232
Target Start/End: Original strand, 6919746 - 6919783
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattc 232  Q
    |||||||||||| |||||||||||||||||||||||||    
T  6919746 aatgttttgagggaattcaactactttgaggtgaattc 6919783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 206
Target Start/End: Original strand, 33733429 - 33733463
Alignment:
Q  172 tttatagtgtgtttggatgggggaatgttttgagg 206  Q
    |||| ||||||||||||||||||||||||||||||    
T  33733429 tttagagtgtgtttggatgggggaatgttttgagg 33733463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 206
Target Start/End: Complemental strand, 6919864 - 6919835
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgagg 206  Q
    ||||||||||||||||||||||||||||||    
T  6919864 agtgtgtttggatgggggaatgttttgagg 6919835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 206
Target Start/End: Original strand, 9285649 - 9285678
Alignment:
Q  177 agtgtgtttggatgggggaatgttttgagg 206  Q
    ||||||||||||||||||||||||||||||    
T  9285649 agtgtgtttggatgggggaatgttttgagg 9285678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 231
Target Start/End: Complemental strand, 15299546 - 15299510
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaatt 231  Q
    |||||||||| | ||||||||||||||||||||||||    
T  15299546 aatgttttgaaggaattcaactactttgaggtgaatt 15299510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 231
Target Start/End: Original strand, 28918203 - 28918239
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaatt 231  Q
    |||||||| ||||||||||| ||||||||||||||||    
T  28918203 aatgttttaaggaaattcaaatactttgaggtgaatt 28918239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 239
Target Start/End: Original strand, 109046 - 109113
Alignment:
Q  172 tttatagtgtgtttggatgggggaatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||| |||||||||||||||||||||||||||||| |||| || |||||||| |||||||| ||||||    
T  109046 tttagagtgtgtttggatgggggaatgttttgagggaatttaaatactttgatgtgaattccattgtt 109113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 195 - 236
Target Start/End: Original strand, 42035 - 42076
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattctatt 236  Q
    |||||||||||| |||||||||||||||||||||||||||||    
T  42035 aatgttttgagggaattcaactactttgaggtgaattctatt 42076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 4113 - 4157
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||||||||| ||||||| ||||||||||||||||||||||||    
T  4113 aatgttttgagggaattcaaatactttgaggtgaattctattgtt 4157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 82981 - 83025
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||||||||| |||||||||||||| |||||||||||||||||    
T  82981 aatgttttgagggaattcaactactttaaggtgaattctattgtt 83025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 56395 - 56351
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||||||||| |||||||||||||| |||||||||||||||||    
T  56395 aatgttttgagggaattcaactactttaaggtgaattctattgtt 56351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 56289 - 56345
Alignment:
Q  177 agtgtgtttggatgggggaatg-----ttttgaggaaattcaactactttgaggtga 228  Q
    ||||||||||||||||||||||     |||||||| |||||||||||||||||||||    
T  56289 agtgtgtttggatgggggaatgtaatgttttgagggaattcaactactttgaggtga 56345  T

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Target: scaffold1562 (Bit Score: 34; Significance: 0.0000000003; HSPs: 3)
Name: scaffold1562
Description:

Target: scaffold1562; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 206
Target Start/End: Complemental strand, 566 - 533
Alignment:
Q  173 ttatagtgtgtttggatgggggaatgttttgagg 206  Q
    ||||||||||||||||||||||||||||||||||    
T  566 ttatagtgtgtttggatgggggaatgttttgagg 533  T

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Target: scaffold1562; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 228
Target Start/End: Complemental strand, 526 - 493
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtga 228  Q
    |||||||||||| |||||||||||||||||||||    
T  526 aatgttttgagggaattcaactactttgaggtga 493  T

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Target: scaffold1562; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 443 - 487
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||||||||| |||||||||||||   ||||||||||||||||    
T  443 aatgttttgagggaattcaactacttcagggtgaattctattgtt 487  T

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Target: scaffold1158 (Bit Score: 34; Significance: 0.0000000003; HSPs: 3)
Name: scaffold1158
Description:

Target: scaffold1158; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 206
Target Start/End: Original strand, 2027 - 2060
Alignment:
Q  173 ttatagtgtgtttggatgggggaatgttttgagg 206  Q
    ||||||||||||||||||||||||||||||||||    
T  2027 ttatagtgtgtttggatgggggaatgttttgagg 2060  T

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Target: scaffold1158; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 228
Target Start/End: Original strand, 2067 - 2100
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtga 228  Q
    |||||||||||| |||||||||||||||||||||    
T  2067 aatgttttgagggaattcaactactttgaggtga 2100  T

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Target: scaffold1158; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 2150 - 2106
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||||||||| |||||||||||||   ||||||||||||||||    
T  2150 aatgttttgagggaattcaactacttcagggtgaattctattgtt 2106  T

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Target: scaffold0337 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 239
Target Start/End: Complemental strand, 16429 - 16365
Alignment:
Q  177 agtgtgtttggatgggggaatg--ttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    ||||||||| ||||||||||||  |||| ||||||||||| || |||||||| ||||| ||||||    
T  16429 agtgtgtttagatgggggaatgttttttaaggaaattcaaatattttgaggtaaattccattgtt 16365  T

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Target: scaffold0400 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 4533 - 4489
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||||||||||||||||| || |||| ||||||||| ||||||    
T  4533 aatgttttgaggaaattcaaatattttggggtgaattccattgtt 4489  T

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Target: scaffold0365 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 5177 - 5133
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||||||||||||||||| || |||| ||||||||| ||||||    
T  5177 aatgttttgaggaaattcaaatattttggggtgaattccattgtt 5133  T

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Target: scaffold0027 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 10924 - 10968
Alignment:
Q  195 aatgttttgaggaaattcaactactttgaggtgaattctattgtt 239  Q
    |||||||||||| ||||||| |||||||| |||||||| ||||||    
T  10924 aatgttttgagggaattcaaatactttgacgtgaattccattgtt 10968  T

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