View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20695_low_1 (Length: 699)

Name: NF20695_low_1
Description: NF20695
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20695_low_1
NF20695_low_1
[»] chr7 (18 HSPs)
chr7 (194-436)||(10974510-10974751)
chr7 (438-568)||(10974801-10974931)
chr7 (569-680)||(4836063-4836174)
chr7 (569-678)||(25857654-25857763)
chr7 (21-125)||(10974139-10974243)
chr7 (569-680)||(4843168-4843279)
chr7 (569-678)||(24379785-24379894)
chr7 (569-678)||(27341456-27341565)
chr7 (257-363)||(28109139-28109247)
chr7 (598-657)||(4603262-4603321)
chr7 (569-680)||(17845440-17845551)
chr7 (587-680)||(38994611-38994705)
chr7 (480-549)||(10647217-10647286)
chr7 (480-568)||(1782544-1782632)
chr7 (582-680)||(13466151-13466246)
chr7 (159-202)||(10974281-10974323)
chr7 (366-400)||(28109264-28109298)
chr7 (500-564)||(9553198-9553261)
[»] chr8 (11 HSPs)
chr8 (569-680)||(36167187-36167298)
chr8 (569-680)||(41481188-41481299)
chr8 (573-678)||(18951643-18951748)
chr8 (573-678)||(18965826-18965931)
chr8 (500-568)||(25393932-25394000)
chr8 (500-568)||(25727990-25728058)
chr8 (480-555)||(18564450-18564524)
chr8 (500-553)||(211442-211495)
chr8 (500-553)||(240761-240814)
chr8 (500-553)||(725065-725118)
chr8 (500-553)||(794116-794169)
[»] scaffold0479 (1 HSPs)
scaffold0479 (569-680)||(2307-2418)
[»] scaffold0003 (1 HSPs)
scaffold0003 (569-678)||(342741-342850)
[»] chr3 (7 HSPs)
chr3 (569-680)||(44783041-44783152)
chr3 (569-680)||(54967729-54967840)
chr3 (569-680)||(54980361-54980472)
chr3 (569-680)||(39298364-39298475)
chr3 (378-435)||(48935756-48935813)
chr3 (500-568)||(14280407-14280475)
chr3 (569-680)||(17645366-17645477)
[»] chr5 (3 HSPs)
chr5 (570-657)||(22764036-22764123)
chr5 (627-676)||(16698118-16698166)
chr5 (300-336)||(40252293-40252329)
[»] scaffold0045 (1 HSPs)
scaffold0045 (569-680)||(26927-27038)
[»] chr2 (4 HSPs)
chr2 (600-677)||(37037555-37037632)
chr2 (480-568)||(16934067-16934154)
chr2 (487-554)||(19593922-19593988)
chr2 (480-568)||(23958967-23959054)
[»] chr4 (6 HSPs)
chr4 (572-680)||(37287379-37287487)
chr4 (596-678)||(3346345-3346427)
chr4 (569-680)||(38394087-38394198)
chr4 (609-680)||(42683356-42683427)
chr4 (581-657)||(9757735-9757810)
chr4 (285-321)||(35075020-35075056)
[»] chr1 (3 HSPs)
chr1 (569-680)||(27641314-27641426)
chr1 (487-568)||(23190765-23190845)
chr1 (370-435)||(42471309-42471374)
[»] scaffold0103 (1 HSPs)
scaffold0103 (480-568)||(16122-16209)
[»] chr6 (1 HSPs)
chr6 (500-568)||(21737106-21737173)
[»] scaffold0514 (1 HSPs)
scaffold0514 (480-524)||(6807-6851)


Alignment Details
Target: chr7 (Bit Score: 196; Significance: 1e-106; HSPs: 18)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 194 - 436
Target Start/End: Original strand, 10974510 - 10974751
Alignment:
Q  194 atacaaaagatagaaattgcagaaacagcggcaatggtggacggcggtgatgataagcggacgaatatataaaaagatcttaaaaagaatatatttgttt 293  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  10974510 atacagaagatagaaattgtagaaacagcggcaatggtggacggcggtgataataagcggacgaatataaaaaaagatcttaaaaagaatatatttgttt 10974609  T
Q  294 tataaggataattatgtcatttaaatatgatatatttcttatcctatcaattacaagggtgcaccaaacac--aaattctatcacatttcttatcatgtg 391  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||| |     
T  10974610 tataaggataattatgtcatttaaatatgatatatttcttatcctatcaattacaagggtgcaccaaacacataaattctatcacatttcttatcatat- 10974708  T
Q  392 tacaccaaacacctgatagaataaaagtgtatcatgtcactatcg 436  Q
      |||||||||||||||| ||||||||||||||||||||||||||    
T  10974709 --caccaaacacctgatacaataaaagtgtatcatgtcactatcg 10974751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 438 - 568
Target Start/End: Original strand, 10974801 - 10974931
Alignment:
Q  438 gatcttagaagactatttcaattctgattgagcatttggaagttgtgtacttgaacattggcagtctcttggttgtatccttgagcaaattctaatcagt 537  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||| | |||||||||||||| ||||||||    
T  10974801 gatcttagaagactatttcaattgtgattgagcatttggaagttgtgtacttgaacattggaagtctcttggttatgtccttgagcaaattgtaatcagt 10974900  T
Q  538 tgtgattatagtgaaaatcaattggaagtgc 568  Q
    |||||||||||||||||||||||||||||||    
T  10974901 tgtgattatagtgaaaatcaattggaagtgc 10974931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 569 - 680
Target Start/End: Complemental strand, 4836174 - 4836063
Alignment:
Q  569 tgtggggtctagccattgccacatggccaacatacatttgacaagatgtaaggttgcatgtgatgacaagtagcaagatgcatggtgtacacatggtgta 668  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  4836174 tgtggggtccagccattgccacatggccaacatacatttgacaagatggaaggttgcatgtgatgacaagtagcaaggtgcatggtgtacacatggtgta 4836075  T
Q  669 gtgtatgagtaa 680  Q
    ||||||||||||    
T  4836074 gtgtatgagtaa 4836063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 569 - 678
Target Start/End: Complemental strand, 25857763 - 25857654
Alignment:
Q  569 tgtggggtctagccattgccacatggccaacatacatttgacaagatgtaaggttgcatgtgatgacaagtagcaagatgcatggtgtacacatggtgta 668  Q
    ||||||||| ||||||||||||||| |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25857763 tgtggggtccagccattgccacatgtccaacatacatttgacaaaatggaaggttgcatgtgatgacaagtagcaagatgcatggtgtacacatggtgta 25857664  T
Q  669 gtgtatgagt 678  Q
    ||||||||||    
T  25857663 gtgtatgagt 25857654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 21 - 125
Target Start/End: Original strand, 10974139 - 10974243
Alignment:
Q  21 atatatcatgactaattgtcctttctccttcatcttttacttaaatattgtgaaagaaaactgattcatacacatgtgattctctaacaatggaacaata 120  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||     
T  10974139 atatatcatgactaattgtcctttctccttcatcttttatttaaatattgtgaaagaaaactgattcataaacatgtgattctctaacaatggaacaatc 10974238  T
Q  121 aattt 125  Q
    |||||    
T  10974239 aattt 10974243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 569 - 680
Target Start/End: Complemental strand, 4843279 - 4843168
Alignment:
Q  569 tgtggggtctagccattgccacatggccaacatacatttgacaagatgtaaggttgcatgtgatgacaagtagcaagatgcatggtgtacacatggtgta 668  Q
    ||||||||| |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| |||||||||| ||||| ||||||||||||||||    
T  4843279 tgtggggtccagccattgccacatggccaacatacatttggcaagatggaaggttgcatgtgatgagaagtagcaaggtgcattgtgtacacatggtgta 4843180  T
Q  669 gtgtatgagtaa 680  Q
    ||||||||||||    
T  4843179 gtgtatgagtaa 4843168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 569 - 678
Target Start/End: Complemental strand, 24379894 - 24379785
Alignment:
Q  569 tgtggggtctagccattgccacatggccaacatacatttgacaagatgtaaggttgcatgtgatgacaagtagcaagatgcatggtgtacacatggtgta 668  Q
    ||||||||| |||||||||||||||||||||||||||||||||| ||| |||||||||| |||| ||||| |||||||||||||||||||||||||||||    
T  24379894 tgtggggtccagccattgccacatggccaacatacatttgacaaaatggaaggttgcatctgataacaagcagcaagatgcatggtgtacacatggtgta 24379795  T
Q  669 gtgtatgagt 678  Q
    ||||||||||    
T  24379794 gtgtatgagt 24379785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 569 - 678
Target Start/End: Complemental strand, 27341565 - 27341456
Alignment:
Q  569 tgtggggtctagccattgccacatggccaacatacatttgacaagatgtaaggttgcatgtgatgacaagtagcaagatgcatggtgtacacatggtgta 668  Q
    |||||||||||||||||||||||||||||| || |||||||||| | | || |||||| | ||||||||||||||||  |||||||||||||||||||||    
T  27341565 tgtggggtctagccattgccacatggccaatatgcatttgacaaaagggaaagttgcacgagatgacaagtagcaaggggcatggtgtacacatggtgta 27341466  T
Q  669 gtgtatgagt 678  Q
    || |||||||    
T  27341465 gtatatgagt 27341456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 257 - 363
Target Start/End: Original strand, 28109139 - 28109247
Alignment:
Q  257 aatatataaaaagatcttaaaa-aga-atatatttgttttataaggataattatgtcatttaaatatgatatatttcttatcctatcaattacaagggtg 354  Q
    |||||| ||||||||||||||| | | |||||||||||||| || ||||||| |||||||||||||| |||||||||||||| |||||||  |||| |||    
T  28109139 aatataaaaaaagatcttaaaacatatatatatttgttttacaaagataattttgtcatttaaatataatatatttcttatcatatcaatagcaagtgtg 28109238  T
Q  355 caccaaaca 363  Q
    |||||||||    
T  28109239 caccaaaca 28109247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 598 - 657
Target Start/End: Original strand, 4603262 - 4603321
Alignment:
Q  598 acatacatttgacaagatgtaaggttgcatgtgatgacaagtagcaagatgcatggtgta 657  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  4603262 acatacatttgacaaaatggaaggttgcatgtgatgacaagtagcaagatgcatggtgta 4603321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 569 - 680
Target Start/End: Original strand, 17845440 - 17845551
Alignment:
Q  569 tgtggggtctagccattgccacatggccaacatacatttgacaagatgtaaggttgcatgtgatgacaagtagcaagatgcatggtgtacacatggtgta 668  Q
    ||||||||  |||||||| ||||| ||||||||| |||||| || ||  |||||||||||||| ||||||||  ||| ||||||||||||||||||| |     
T  17845440 tgtggggttcagccattgtcacatcgccaacatatatttgataaaatagaaggttgcatgtgaagacaagtaataaggtgcatggtgtacacatggtatg 17845539  T
Q  669 gtgtatgagtaa 680  Q
    ||||||||||||    
T  17845540 gtgtatgagtaa 17845551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 587 - 680
Target Start/End: Complemental strand, 38994705 - 38994611
Alignment:
Q  587 ccacatggccaacatacatttgacaaga-tgtaaggttgcatgtgatgacaagtagcaagatgcatggtgtacacatggtgtagtgtatgagtaa 680  Q
    ||||||| | |||||||||||||||| | || || ||||||||||||||||||||||||| ||||||  |||||||||  |||||||||||||||    
T  38994705 ccacatgacgaacatacatttgacaaaaatggaatgttgcatgtgatgacaagtagcaaggtgcatgaagtacacatgaagtagtgtatgagtaa 38994611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 480 - 549
Target Start/End: Original strand, 10647217 - 10647286
Alignment:
Q  480 ttgtgtacttgaacattggcagtctcttggttgtatccttgagcaaattctaatcagttgtgattatagt 549  Q
    |||||| |||||||||||| | |||||| ||||||| ||||||||| ||  |||||||||||||||||||    
T  10647217 ttgtgtgcttgaacattggaattctcttcgttgtattcttgagcaatttgaaatcagttgtgattatagt 10647286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 480 - 568
Target Start/End: Complemental strand, 1782632 - 1782544
Alignment:
Q  480 ttgtgtacttgaacattggcagtctcttggttgtatccttgagcaaattctaatcagttgtgattatagtgaaaatcaattggaagtgc 568  Q
    |||||||||| | |||||  ||||| |||||||| ||||||||||  || |||| |||||||||||||||||| |||  ||||||||||    
T  1782632 ttgtgtacttcagcattgcaagtctattggttgtgtccttgagcattttgtaattagttgtgattatagtgaatatctcttggaagtgc 1782544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 582 - 680
Target Start/End: Complemental strand, 13466246 - 13466151
Alignment:
Q  582 cattgccacatggccaacatacatttgacaagatgtaaggttgcatgtgatgacaagtagcaagatgcatggtgtacacatggtgtagtgtatgagtaa 680  Q
    ||||| ||||||| ||||||| ||||||||| ||  |||||||||||||||   || ||| ||| || |||||||||| |||||||| |||||||||||    
T  13466246 cattgtcacatggacaacatatatttgacaaaatagaaggttgcatgtgat---aactagtaaggtgtatggtgtacatatggtgtaatgtatgagtaa 13466151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 202
Target Start/End: Original strand, 10974281 - 10974323
Alignment:
Q  159 tgaacaccgtattgaagaataacggaaaaagcagtatacaaaag 202  Q
    |||||||||||||||||| |||||| ||||||||||||||||||    
T  10974281 tgaacaccgtattgaagagtaacgg-aaaagcagtatacaaaag 10974323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 366 - 400
Target Start/End: Original strand, 28109264 - 28109298
Alignment:
Q  366 aattctatcacatttcttatcatgtgtacaccaaa 400  Q
    ||||||||||||||||||||||||| |||||||||    
T  28109264 aattctatcacatttcttatcatgtatacaccaaa 28109298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 500 - 564
Target Start/End: Complemental strand, 9553261 - 9553198
Alignment:
Q  500 agtctcttggttgtatccttgagcaaattctaatcagttgtgattatagtgaaaatcaattggaa 564  Q
    |||||||||||||| | ||||||||| || | |||||||| |||||||||||| ||| |||||||    
T  9553261 agtctcttggttgtgttcttgagcaa-ttgtgatcagttgcgattatagtgaatatccattggaa 9553198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 100; Significance: 4e-49; HSPs: 11)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 569 - 680
Target Start/End: Original strand, 36167187 - 36167298
Alignment:
Q  569 tgtggggtctagccattgccacatggccaacatacatttgacaagatgtaaggttgcatgtgatgacaagtagcaagatgcatggtgtacacatggtgta 668  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36167187 tgtggggtccagccattgccacatgtccaacatacatttgacaagatggaaggttgcatgtgatgacaagtagcaagatgcatggtgtacacatggtgta 36167286  T
Q  669 gtgtatgagtaa 680  Q
    ||||||||||||    
T  36167287 gtgtatgagtaa 36167298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 569 - 680
Target Start/End: Original strand, 41481188 - 41481299
Alignment:
Q  569 tgtggggtctagccattgccacatggccaacatacatttgacaagatgtaaggttgcatgtgatgacaagtagcaagatgcatggtgtacacatggtgta 668  Q
    ||||||||| ||||||||| ||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41481188 tgtggggtccagccattgctacatgtccaacatacatttgacaagatggaaggttgcatgtgatgacaagtagcaagatgcatggtgtacacatggtgta 41481287  T
Q  669 gtgtatgagtaa 680  Q
    ||||||||||||    
T  41481288 gtgtatgagtaa 41481299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 573 - 678
Target Start/End: Complemental strand, 18951748 - 18951643
Alignment:
Q  573 gggtctagccattgccacatggccaacatacatttgacaagatgtaaggttgcatgtgatgacaagtagcaagatgcatggtgtacacatggtgtagtgt 672  Q
    ||||| ||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  18951748 gggtccagccattgccacatgaccaacatacatttgacaaaatggaaggttgcatgtgatgaaaagtagcaagatgcatggtgtacacatggtgtagtgt 18951649  T
Q  673 atgagt 678  Q
    ||||||    
T  18951648 atgagt 18951643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 573 - 678
Target Start/End: Original strand, 18965826 - 18965931
Alignment:
Q  573 gggtctagccattgccacatggccaacatacatttgacaagatgtaaggttgcatgtgatgacaagtagcaagatgcatggtgtacacatggtgtagtgt 672  Q
    ||||| |||||||| ||||||||||||||  ||||||||| ||| || || | |||||||||||||||||||||||||||||||||||||||||||||||    
T  18965826 gggtccagccattgtcacatggccaacatgtatttgacaaaatggaacgtagtatgtgatgacaagtagcaagatgcatggtgtacacatggtgtagtgt 18965925  T
Q  673 atgagt 678  Q
    ||||||    
T  18965926 atgagt 18965931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 500 - 568
Target Start/End: Original strand, 25393932 - 25394000
Alignment:
Q  500 agtctcttggttgtatccttgagcaaattctaatcagttgtgattatagtg-aaaatcaattggaagtgc 568  Q
    |||||||||||||| ||||||||||| ||| ||||||||||||||||| || ||||||| ||||||||||    
T  25393932 agtctcttggttgtgtccttgagcaatttc-aatcagttgtgattataatgtaaaatcatttggaagtgc 25394000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 500 - 568
Target Start/End: Original strand, 25727990 - 25728058
Alignment:
Q  500 agtctcttggttgtatccttgagcaaattctaatcagttgtgattatagt-gaaaatcaattggaagtgc 568  Q
    |||||||||||||| ||||||||||| ||| ||||||||||||||||| | |||||||| ||||||||||    
T  25727990 agtctcttggttgtgtccttgagcaatttc-aatcagttgtgattataatggaaaatcatttggaagtgc 25728058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 480 - 555
Target Start/End: Original strand, 18564450 - 18564524
Alignment:
Q  480 ttgtgtacttgaacattggcagtctcttggttgtatccttgagcaaattctaatcagttgtgattatagtgaaaat 555  Q
    |||||| ||||| |||||| ||| | |||||||| |||||||| ||||| |||| |||| ||||||||||||||||    
T  18564450 ttgtgtgcttgagcattggaagttttttggttgtgtccttgag-aaattgtaataagttatgattatagtgaaaat 18564524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 500 - 553
Target Start/End: Original strand, 211442 - 211495
Alignment:
Q  500 agtctcttggttgtatccttgagcaaattctaatcagttgtgattatagtgaaa 553  Q
    ||||||||||  || ||||||||||| || ||||||||| ||||||||||||||    
T  211442 agtctcttggaagtgtccttgagcaatttgtaatcagttttgattatagtgaaa 211495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 500 - 553
Target Start/End: Complemental strand, 240814 - 240761
Alignment:
Q  500 agtctcttggttgtatccttgagcaaattctaatcagttgtgattatagtgaaa 553  Q
    ||||||||||  || ||||||||||| || ||||||||| ||||||||||||||    
T  240814 agtctcttggaagtgtccttgagcaatttgtaatcagttttgattatagtgaaa 240761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 500 - 553
Target Start/End: Original strand, 725065 - 725118
Alignment:
Q  500 agtctcttggttgtatccttgagcaaattctaatcagttgtgattatagtgaaa 553  Q
    ||||||||||  || ||||||||||| || ||||||||| ||||||||||||||    
T  725065 agtctcttggaagtgtccttgagcaatttgtaatcagttttgattatagtgaaa 725118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 500 - 553
Target Start/End: Complemental strand, 794169 - 794116
Alignment:
Q  500 agtctcttggttgtatccttgagcaaattctaatcagttgtgattatagtgaaa 553  Q
    ||||||||||  || ||||||||||| || ||||||||| ||||||||||||||    
T  794169 agtctcttggaagtgtccttgagcaatttgtaatcagttttgattatagtgaaa 794116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0479 (Bit Score: 96; Significance: 1e-46; HSPs: 1)
Name: scaffold0479
Description:

Target: scaffold0479; HSP #1
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 569 - 680
Target Start/End: Original strand, 2307 - 2418
Alignment:
Q  569 tgtggggtctagccattgccacatggccaacatacatttgacaagatgtaaggttgcatgtgatgacaagtagcaagatgcatggtgtacacatggtgta 668  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  2307 tgtggggtccagccattgccacatgtccaacatacatttgacaagatggaaggtttcatgtgatgacaagtagcaagatgcatggtgtacacatggtgta 2406  T
Q  669 gtgtatgagtaa 680  Q
    ||||||||||||    
T  2407 gtgtatgagtaa 2418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 94; Significance: 2e-45; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 569 - 678
Target Start/End: Complemental strand, 342850 - 342741
Alignment:
Q  569 tgtggggtctagccattgccacatggccaacatacatttgacaagatgtaaggttgcatgtgatgacaagtagcaagatgcatggtgtacacatggtgta 668  Q
    ||||||||| ||||||||||||||| |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  342850 tgtggggtccagccattgccacatgtccaacatacatttgacaaaatggaaggttgcatgtgatgacaagtagcaagatgcatggtgtacacatggtgta 342751  T
Q  669 gtgtatgagt 678  Q
    ||||||||||    
T  342750 gtgtatgagt 342741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 92; Significance: 3e-44; HSPs: 7)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 569 - 680
Target Start/End: Complemental strand, 44783152 - 44783041
Alignment:
Q  569 tgtggggtctagccattgccacatggccaacatacatttgacaagatgtaaggttgcatgtgatgacaagtagcaagatgcatggtgtacacatggtgta 668  Q
    ||||||||| |||||||||||||||  ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  44783152 tgtggggtccagccattgccacatgttcaacatacatttgacaagatggaaggttgcatgtggtgacaagtagcaagatgcatggtgtacacatggtgta 44783053  T
Q  669 gtgtatgagtaa 680  Q
    ||||||||||||    
T  44783052 gtgtatgagtaa 44783041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 569 - 680
Target Start/End: Complemental strand, 54967840 - 54967729
Alignment:
Q  569 tgtggggtctagccattgccacatggccaacatacatttgacaagatgtaaggttgcatgtgatgacaagtagcaagatgcatggtgtacacatggtgta 668  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  54967840 tgtggggtccagccattgccacatgtccaacatacatttgacaagatggaaggttgcatgtgatgataagtagcaggatgcatggtgtacacatggtgta 54967741  T
Q  669 gtgtatgagtaa 680  Q
    ||||||||||||    
T  54967740 gtgtatgagtaa 54967729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 569 - 680
Target Start/End: Complemental strand, 54980472 - 54980361
Alignment:
Q  569 tgtggggtctagccattgccacatggccaacatacatttgacaagatgtaaggttgcatgtgatgacaagtagcaagatgcatggtgtacacatggtgta 668  Q
    ||||||||| |||||||||| |||| |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  54980472 tgtggggtccagccattgccgcatgtccaacatacatttgacaagatggaaggttgcatgtgatgacaagtagcaggatgcatggtgtacacatggtgta 54980373  T
Q  669 gtgtatgagtaa 680  Q
    ||||||||||||    
T  54980372 gtgtatgagtaa 54980361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 569 - 680
Target Start/End: Original strand, 39298364 - 39298475
Alignment:
Q  569 tgtggggtctagccattgccacatggccaacatacatttgacaagatgtaaggttgcatgtgatgacaagtagcaagatgcatggtgtacacatggtgta 668  Q
    ||||||||| ||| | | ||||||||||||||||  |||||||| ||| ||| ||||||||||||| |||||  ||| |||||||||||||||| |||||    
T  39298364 tgtggggtccagcaactcccacatggccaacataggtttgacaaaatggaagattgcatgtgatgataagtattaaggtgcatggtgtacacatagtgta 39298463  T
Q  669 gtgtatgagtaa 680  Q
    ||||| ||||||    
T  39298464 gtgtacgagtaa 39298475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 378 - 435
Target Start/End: Complemental strand, 48935813 - 48935756
Alignment:
Q  378 tttcttatcatgtgtacaccaaacacctgatagaataaaagtgtatcatgtcactatc 435  Q
    |||||||||||||||||||||||||| |||||| ||||  || |||||||||||||||    
T  48935813 tttcttatcatgtgtacaccaaacacatgataggataagtgtctatcatgtcactatc 48935756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 500 - 568
Target Start/End: Complemental strand, 14280475 - 14280407
Alignment:
Q  500 agtctcttggttgtatccttgagcaaattctaatcagttgtgattatagtgaaaatcaattggaagtgc 568  Q
    ||||| |||||||| || |||| ||| || ||||||||||||||||||||||||||| |||| ||||||    
T  14280475 agtcttttggttgtgtctttgaacaatttgtaatcagttgtgattatagtgaaaatccattgaaagtgc 14280407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 569 - 680
Target Start/End: Original strand, 17645366 - 17645477
Alignment:
Q  569 tgtggggtctagccattgccacatggccaacatacatttgacaagatgtaaggttgcatgtgatgacaagtagcaagatgcatggtgtacacatggtgta 668  Q
    ||||||||| | | |||||||| |||||||| |  |||||||||  |  ||||||||||||||| |||||||||| | || |||||||| |  | |||||    
T  17645366 tgtggggtccatcgattgccacgtggccaacttgtatttgacaaactcgaaggttgcatgtgatcacaagtagcagggtgtatggtgtatagtttgtgta 17645465  T
Q  669 gtgtatgagtaa 680  Q
    ||||||||||||    
T  17645466 gtgtatgagtaa 17645477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 68; Significance: 5e-30; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 570 - 657
Target Start/End: Original strand, 22764036 - 22764123
Alignment:
Q  570 gtggggtctagccattgccacatggccaacatacatttgacaagatgtaaggttgcatgtgatgacaagtagcaagatgcatggtgta 657  Q
    |||||||| | ||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  22764036 gtggggtccaaccattgccacatgtccaacatacatttgacaaaatggaaggttgcatgtgatgacaagtagcaagatgcatggtgta 22764123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 627 - 676
Target Start/End: Original strand, 16698118 - 16698166
Alignment:
Q  627 tgtgatgacaagtagcaagatgcatggtgtacacatggtgtagtgtatga 676  Q
    |||||||||| |||||||| |||||| |||||| ||||||||||||||||    
T  16698118 tgtgatgaca-gtagcaaggtgcatgatgtacatatggtgtagtgtatga 16698166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 300 - 336
Target Start/End: Complemental strand, 40252329 - 40252293
Alignment:
Q  300 gataattatgtcatttaaatatgatatatttcttatc 336  Q
    ||||||| |||||||||||||| ||||||||||||||    
T  40252329 gataattttgtcatttaaatataatatatttcttatc 40252293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 64; Significance: 1e-27; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 569 - 680
Target Start/End: Complemental strand, 27038 - 26927
Alignment:
Q  569 tgtggggtctagccattgccacatggccaacatacatttgacaagatgtaaggttgcatgtgatgacaagtagcaagatgcatggtgtacacatggtgta 668  Q
    ||||||||| | | ||||||||   ||||||||||||||||||| ||| |||||||||||||||||||||||||||| || |||||||||| || |||||    
T  27038 tgtggggtccaactattgccacgccgccaacatacatttgacaaaatgaaaggttgcatgtgatgacaagtagcaaggtgtatggtgtacaaatagtgta 26939  T
Q  669 gtgtatgagtaa 680  Q
    ||||||||||||    
T  26938 gtgtatgagtaa 26927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 62; Significance: 2e-26; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 600 - 677
Target Start/End: Original strand, 37037555 - 37037632
Alignment:
Q  600 atacatttgacaagatgtaaggttgcatgtgatgacaagtagcaagatgcatggtgtacacatggtgtagtgtatgag 677  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  37037555 atacatttgacaaaatgaaaggttgcatgtgatgacaagtagtaaggtgcatggtgtacacatggtgtagtgtatgag 37037632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 480 - 568
Target Start/End: Original strand, 16934067 - 16934154
Alignment:
Q  480 ttgtgtacttgaacattggcagtctcttggttgtatccttgagcaaattctaatcagttgtgattatagtgaaaatcaattggaagtgc 568  Q
    |||||| ||||| ||| || |||||||||||||| ||||||||| | || |||||| | ||||||||||||||||||| || |||||||    
T  16934067 ttgtgtgcttgagcataggaagtctcttggttgtgtccttgagc-atttgtaatcattagtgattatagtgaaaatcactttgaagtgc 16934154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 487 - 554
Target Start/End: Complemental strand, 19593988 - 19593922
Alignment:
Q  487 cttgaacattggcagtctcttggttgtatccttgagcaaattctaatcagttgtgattatagtgaaaa 554  Q
    ||||||||| |  |||||||||||||| ||||||||||  |  |||||||||||||||||||||||||    
T  19593988 cttgaacatagaaagtctcttggttgtttccttgagcat-tggtaatcagttgtgattatagtgaaaa 19593922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 480 - 568
Target Start/End: Complemental strand, 23959054 - 23958967
Alignment:
Q  480 ttgtgtacttgaacattggcagtctcttggttgtatccttgagcaaattctaatcagttgtgattatagtgaaaatcaattggaagtgc 568  Q
    |||| ||||||| |||| | ||||||||| |||| ||||| ||||  || |||| ||||||||||||| ||||||||  ||||||||||    
T  23959054 ttgtatacttgagcatttgaagtctcttgtttgtgtccttaagcat-ttgtaattagttgtgattataatgaaaatctcttggaagtgc 23958967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 57; Significance: 2e-23; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 572 - 680
Target Start/End: Complemental strand, 37287487 - 37287379
Alignment:
Q  572 ggggtctagccattgccacatggccaacatacatttgacaagatgtaaggttgcatgtgatgacaagtagcaagatgcatggtgtacacatggtgtagtg 671  Q
    |||||| |||||||||||||| |||||||||||||||| || ||  ||||||||||||||||| |  | | ||| ||||| |||||||||||||||||||    
T  37287487 ggggtccagccattgccacatagccaacatacatttgataaaatagaaggttgcatgtgatgagatatggtaaggtgcatagtgtacacatggtgtagtg 37287388  T
Q  672 tatgagtaa 680  Q
    |||||||||    
T  37287387 tatgagtaa 37287379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 596 - 678
Target Start/End: Original strand, 3346345 - 3346427
Alignment:
Q  596 caacatacatttgacaagatgtaaggttgcatgtgatgacaagtagcaagatgcatggtgtacacatggtgtagtgtatgagt 678  Q
    ||||||||||||||||| ||| |||||||| ||||||||||| ||||||| |||||| |||||| ||||||||||||||||||    
T  3346345 caacatacatttgacaaaatggaaggttgcttgtgatgacaaatagcaaggtgcatgatgtacatatggtgtagtgtatgagt 3346427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 569 - 680
Target Start/End: Complemental strand, 38394198 - 38394087
Alignment:
Q  569 tgtggggtctagccattgccacatggccaacatacatttgacaagatgtaaggttgcatgtgatgacaagtagcaagatgcatggtgtacacatggtgta 668  Q
    |||||||||||| ||||| ||| ||| |||||||||||||| || ||  || ||||||||||||||||||||||||  |||| | ||||||||| ||||     
T  38394198 tgtggggtctagtcattgtcacgtggtcaacatacatttgataaaatagaatgttgcatgtgatgacaagtagcaacgtgcacgatgtacacatagtgtg 38394099  T
Q  669 gtgtatgagtaa 680  Q
    ||||||||||||    
T  38394098 gtgtatgagtaa 38394087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 609 - 680
Target Start/End: Complemental strand, 42683427 - 42683356
Alignment:
Q  609 acaagatgtaaggttgcatgtgatgacaagtagcaagatgcatggtgtacacatggtgtagtgtatgagtaa 680  Q
    |||| ||| ||||||| ||||||||||||||| |||| ||||||||||||||||| |||||| |||||||||    
T  42683427 acaaaatgaaaggttgtatgtgatgacaagtaacaaggtgcatggtgtacacatgatgtagtatatgagtaa 42683356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 581 - 657
Target Start/End: Complemental strand, 9757810 - 9757735
Alignment:
Q  581 ccattgccacatggccaacatacatttgacaagatgtaaggttgcatgtgatgacaagtagcaagatgcatggtgta 657  Q
    |||||||||||||  || ||||| |||||||| ||| ||||| | |||||||||||||||| ||||| |||||||||    
T  9757810 ccattgccacatgtacagcatac-tttgacaaaatggaaggtagtatgtgatgacaagtagtaagatacatggtgta 9757735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 285 - 321
Target Start/End: Original strand, 35075020 - 35075056
Alignment:
Q  285 tatttgttttataaggataattatgtcatttaaatat 321  Q
    ||||||||||||||||||| || ||||||||||||||    
T  35075020 tatttgttttataaggatagttttgtcatttaaatat 35075056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 57; Significance: 2e-23; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 569 - 680
Target Start/End: Original strand, 27641314 - 27641426
Alignment:
Q  569 tgtggggtctagccattg-ccacatggccaacatacatttgacaagatgtaaggttgcatgtgatgacaagtagcaagatgcatggtgtacacatggtgt 667  Q
    ||||||||| || ||||| |||| ||||||||||||||||||||| ||| |||||||||||||||||||||||||||  |||||||| | || || ||||    
T  27641314 tgtggggtccagtcattggccacttggccaacatacatttgacaacatggaaggttgcatgtgatgacaagtagcaatgtgcatggtatgcagatagtgt 27641413  T
Q  668 agtgtatgagtaa 680  Q
     ||||||||||||    
T  27641414 tgtgtatgagtaa 27641426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 487 - 568
Target Start/End: Complemental strand, 23190845 - 23190765
Alignment:
Q  487 cttgaacattggcagtctcttggttgtatccttgagcaaattctaatcagttgtgattatagtgaaaatcaattggaagtgc 568  Q
    ||||| |||||| |||||||||||||| |||||||| || || |||| ||||||||||||||||||||||  ||||||||||    
T  23190845 cttgagcattggaagtctcttggttgtgtccttgagtaa-ttgtaattagttgtgattatagtgaaaatctcttggaagtgc 23190765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 435
Target Start/End: Complemental strand, 42471374 - 42471309
Alignment:
Q  370 ctatcacatttcttatcatgtgtacaccaaacacctgatagaataaaagtgtatcatgtcactatc 435  Q
    |||||| |||||||||||||||| |||||||||| |||||  ||||| || |||||| ||| ||||    
T  42471374 ctatcatatttcttatcatgtgtgcaccaaacacatgatatgataaatgtctatcatatcattatc 42471309  T

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Target: scaffold0103 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 480 - 568
Target Start/End: Complemental strand, 16209 - 16122
Alignment:
Q  480 ttgtgtacttgaacattggcagtctcttggttgtatccttgagcaaattctaatcagttgtgattatagtgaaaatcaattggaagtgc 568  Q
    |||||| ||||| ||| || |||||||||||||| ||||||||| | || |||||| | ||||||||||||||||||| || |||||||    
T  16209 ttgtgtgcttgagcataggaagtctcttggttgtgtccttgagc-atttgtaatcattagtgattatagtgaaaatcactttgaagtgc 16122  T

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Target: chr6 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 500 - 568
Target Start/End: Complemental strand, 21737173 - 21737106
Alignment:
Q  500 agtctcttggttgtatccttgagcaaattctaatcagttgtgattatagtgaaaatcaattggaagtgc 568  Q
    |||||||||| | | ||||||||||  || ||| ||||||||||||||||||||||| |||||||||||    
T  21737173 agtctcttggatatctccttgagcat-ttgtaaacagttgtgattatagtgaaaatccattggaagtgc 21737106  T

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Target: scaffold0514 (Bit Score: 29; Significance: 0.000001; HSPs: 1)
Name: scaffold0514
Description:

Target: scaffold0514; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 480 - 524
Target Start/End: Complemental strand, 6851 - 6807
Alignment:
Q  480 ttgtgtacttgaacattggcagtctcttggttgtatccttgagca 524  Q
    |||||| |||||||||||||||| ||||| |||| ||||||||||    
T  6851 ttgtgtgcttgaacattggcagtatcttgcttgtgtccttgagca 6807  T

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