View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20698_high_10 (Length: 280)
Name: NF20698_high_10
Description: NF20698
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20698_high_10 |
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Alignment Details
Target: chr1 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 19 - 271
Target Start/End: Complemental strand, 46926098 - 46925829
Alignment:
| Q |
19 |
aattttggcataaacttccacaatgtaggttcaaatcaaattaatgttgactattttgaagaaagaaaaacatatactacatatatgtgaatagactgag |
118 |
Q |
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| T |
46926098 |
aattttggcataaacttccacaatgtaggttcaaatcaaattaatgttgactattttgaagaaagaaaaacatatactacatatatgtgaatagactgag |
46925999 |
T |
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| Q |
119 |
tcttctagtaaattctttaag-----------------tcacttcagcaaataaagtccccgaatcatttacttgttttctttatatctttttcttttaa |
201 |
Q |
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| T |
46925998 |
tcttctagtaaattctttaagccaattcaaaacctaaatcacttcagcaaataaagtccccgaatcatttacttgttttctttctatctttttcttttaa |
46925899 |
T |
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| Q |
202 |
ataaatatcctcactgccatgattaaattttaggttcgaactcgcgtcctaacacatcaaatgtctctgc |
271 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
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| T |
46925898 |
ataaatatcctcactgccatgattaaattttaggttcgaactcacgtcctaacacatcaaatgtctctgc |
46925829 |
T |
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