View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20699_low_22 (Length: 232)
Name: NF20699_low_22
Description: NF20699
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20699_low_22 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 216; Significance: 1e-119; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 37217042 - 37216811
Alignment:
| Q |
1 |
taaatttgaagaattcatataaacgaaggagatctaatttcgattcctttagttatgatttgggggatacctatagagtgaatgacagcgacatcgtaat |
100 |
Q |
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| T |
37217042 |
taaatttgaagaattcatataaacgaaggagatctaatttcgattcctttagttatgatttgggggatacctatagagtgaatgacggcgacattgtaat |
37216943 |
T |
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| Q |
101 |
tgacacacttgtttatgatttaaatgatgtctagcttaattgtgaagataatgatcgagttaggagaaattcggattctacaacgttaaataaagtgttg |
200 |
Q |
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| T |
37216942 |
tgacacacttgtttatgatttaaatgatgtctagcttaattgtgaagataatgatcgagttaagagaaattcggattctacaacgttaaataaagtgttg |
37216843 |
T |
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| Q |
201 |
gagttatagggtgggtagctattaagccagct |
232 |
Q |
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||||||||||||| |||||||||||||||||| |
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| T |
37216842 |
gagttatagggtgagtagctattaagccagct |
37216811 |
T |
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