View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20699_low_26 (Length: 207)
Name: NF20699_low_26
Description: NF20699
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20699_low_26 |
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Alignment Details
Target: chr1 (Bit Score: 159; Significance: 7e-85; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 159; E-Value: 7e-85
Query Start/End: Original strand, 11 - 188
Target Start/End: Original strand, 14153481 - 14153661
Alignment:
| Q |
11 |
aagaatatacacatgtttgtttcataaaaaagtgaaccagccgttaattctgcacttggtggaatacaaagaggggtagtgattgtaattaagcattaat |
110 |
Q |
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| T |
14153481 |
aagaatatacacatgatcgtttcataaaaaagtgaaccagccgttaattctgcacttggtggaatacaaagaggggtagtgattgtaattaagcattaat |
14153580 |
T |
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| Q |
111 |
aaactgttcgtggaattcgtggaatacatttcgtaggaaccagcatttccat---aaaaaagtaaacaaaatggttcacat |
188 |
Q |
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| T |
14153581 |
aaactgttcgtggaattcgtggaatacatttcgtaggaaccagcatttccataaaaaaaaagtaaacaaaatggttcacat |
14153661 |
T |
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