View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20699_low_3 (Length: 611)

Name: NF20699_low_3
Description: NF20699
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20699_low_3
NF20699_low_3
[»] chr3 (84 HSPs)
chr3 (19-602)||(46816869-46817453)
chr3 (32-427)||(46818685-46819040)
chr3 (448-574)||(19222534-19222660)
chr3 (467-573)||(46844938-46845044)
chr3 (468-573)||(24303387-24303492)
chr3 (468-557)||(49443391-49443480)
chr3 (447-575)||(9684991-9685119)
chr3 (450-545)||(26880202-26880297)
chr3 (471-557)||(43280081-43280167)
chr3 (448-557)||(54408498-54408607)
chr3 (451-547)||(4227695-4227791)
chr3 (448-566)||(27837270-27837387)
chr3 (472-573)||(48515357-48515458)
chr3 (447-547)||(38949697-38949797)
chr3 (469-544)||(4396648-4396723)
chr3 (471-574)||(11995127-11995230)
chr3 (468-547)||(49577392-49577471)
chr3 (451-557)||(47098529-47098635)
chr3 (468-573)||(28951713-28951818)
chr3 (467-547)||(32401514-32401593)
chr3 (468-568)||(52992027-52992127)
chr3 (470-556)||(7253490-7253576)
chr3 (471-560)||(29559644-29559734)
chr3 (447-544)||(5173957-5174054)
chr3 (467-564)||(10952272-10952369)
chr3 (468-557)||(18764836-18764924)
chr3 (467-539)||(25883954-25884027)
chr3 (447-544)||(35849507-35849604)
chr3 (467-530)||(9114051-9114115)
chr3 (454-541)||(22857423-22857510)
chr3 (468-547)||(44764745-44764822)
chr3 (468-572)||(41936374-41936479)
chr3 (468-547)||(32776234-32776314)
chr3 (479-543)||(55383867-55383931)
chr3 (449-543)||(15005968-15006063)
chr3 (468-543)||(23653184-23653259)
chr3 (447-560)||(37740776-37740889)
chr3 (471-541)||(41411598-41411668)
chr3 (462-506)||(14795175-14795220)
chr3 (468-516)||(25279026-25279075)
chr3 (467-511)||(27329898-27329943)
chr3 (451-543)||(29531241-29531333)
chr3 (471-572)||(40192154-40192255)
chr3 (474-547)||(49983682-49983755)
chr3 (467-511)||(51879154-51879199)
chr3 (468-560)||(53432704-53432797)
chr3 (468-505)||(54769798-54769835)
chr3 (468-547)||(17602643-17602723)
chr3 (468-547)||(34102578-34102658)
chr3 (449-516)||(36666514-36666582)
chr3 (468-547)||(39719958-39720038)
chr3 (472-572)||(44651954-44652054)
chr3 (475-571)||(52309085-52309181)
chr3 (453-511)||(44625177-44625236)
chr3 (468-541)||(2007050-2007124)
chr3 (492-577)||(6951811-6951895)
chr3 (492-569)||(36331746-36331824)
chr3 (468-502)||(43645143-43645177)
chr3 (479-545)||(54897342-54897408)
chr3 (482-547)||(3614062-3614127)
chr3 (447-503)||(4860228-4860285)
chr3 (447-503)||(4880236-4880293)
chr3 (525-570)||(10350524-10350569)
chr3 (498-574)||(26583094-26583170)
chr3 (471-547)||(30779537-30779614)
chr3 (468-572)||(32256521-32256626)
chr3 (478-547)||(42108160-42108229)
chr3 (468-572)||(52974020-52974125)
chr3 (468-511)||(3894603-3894647)
chr3 (468-511)||(7270014-7270058)
chr3 (468-511)||(10482820-10482864)
chr3 (468-511)||(11250538-11250582)
chr3 (492-548)||(17003824-17003880)
chr3 (468-511)||(22472281-22472325)
chr3 (468-547)||(28689639-28689719)
chr3 (468-547)||(31586970-31587050)
chr3 (468-547)||(34898734-34898814)
chr3 (467-506)||(41710647-41710687)
chr3 (491-547)||(44798545-44798601)
chr3 (467-506)||(46767407-46767447)
chr3 (27-79)||(46827111-46827163)
chr3 (482-543)||(48443146-48443209)
chr3 (468-511)||(50675709-50675753)
chr3 (478-530)||(53753661-53753713)
[»] chr4 (88 HSPs)
chr4 (449-574)||(23132756-23132880)
chr4 (447-557)||(38848067-38848178)
chr4 (447-569)||(11294785-11294907)
chr4 (448-557)||(29406370-29406479)
chr4 (468-575)||(2629574-2629681)
chr4 (468-571)||(51890796-51890899)
chr4 (480-576)||(42044026-42044122)
chr4 (447-557)||(3784925-3785034)
chr4 (447-557)||(40486454-40486564)
chr4 (468-576)||(23924840-23924948)
chr4 (449-557)||(42663994-42664102)
chr4 (468-544)||(49264552-49264628)
chr4 (449-544)||(9764972-9765067)
chr4 (469-544)||(18048603-18048678)
chr4 (447-570)||(31852349-31852472)
chr4 (462-573)||(55055913-55056024)
chr4 (468-547)||(42002329-42002408)
chr4 (468-572)||(3036022-3036127)
chr4 (472-545)||(12625854-12625927)
chr4 (468-573)||(32293105-32293210)
chr4 (468-541)||(51777873-51777946)
chr4 (469-573)||(25224469-25224573)
chr4 (467-547)||(52556962-52557042)
chr4 (468-570)||(624480-624583)
chr4 (472-547)||(45139853-45139928)
chr4 (475-577)||(24704122-24704223)
chr4 (448-541)||(29256936-29257029)
chr4 (469-569)||(13578433-13578534)
chr4 (468-557)||(19654859-19654948)
chr4 (469-573)||(33933707-33933812)
chr4 (469-514)||(53921476-53921521)
chr4 (468-552)||(28465742-28465826)
chr4 (468-544)||(43627229-43627305)
chr4 (472-547)||(32287512-32287587)
chr4 (468-547)||(40809149-40809228)
chr4 (468-506)||(2688160-2688198)
chr4 (470-547)||(22788643-22788721)
chr4 (524-574)||(26250643-26250693)
chr4 (492-573)||(42411474-42411556)
chr4 (468-541)||(47929274-47929348)
chr4 (468-574)||(52015487-52015592)
chr4 (468-572)||(1457985-1458090)
chr4 (468-572)||(11375856-11375961)
chr4 (470-543)||(13088936-13089009)
chr4 (447-547)||(30057245-30057346)
chr4 (478-547)||(34353802-34353871)
chr4 (467-511)||(36099149-36099194)
chr4 (478-547)||(42134435-42134504)
chr4 (469-541)||(21863854-21863926)
chr4 (469-541)||(21919715-21919787)
chr4 (469-572)||(21935475-21935579)
chr4 (468-544)||(23555977-23556053)
chr4 (468-560)||(43905720-43905812)
chr4 (468-516)||(44040413-44040461)
chr4 (447-511)||(46791155-46791219)
chr4 (468-547)||(54534849-54534929)
chr4 (471-541)||(2275075-2275146)
chr4 (468-547)||(27308673-27308752)
chr4 (452-499)||(28815683-28815730)
chr4 (492-574)||(36045823-36045905)
chr4 (479-558)||(39311678-39311757)
chr4 (469-511)||(42395286-42395329)
chr4 (468-514)||(46903386-46903433)
chr4 (468-570)||(48615439-48615542)
chr4 (447-572)||(8965092-8965218)
chr4 (525-575)||(16975067-16975117)
chr4 (467-505)||(30263825-30263863)
chr4 (467-505)||(30288324-30288362)
chr4 (468-572)||(10402439-10402544)
chr4 (492-545)||(29584668-29584721)
chr4 (467-511)||(30305858-30305903)
chr4 (468-541)||(44568187-44568260)
chr4 (468-572)||(49901480-49901585)
chr4 (468-511)||(2222598-2222642)
chr4 (454-501)||(4513393-4513441)
chr4 (468-547)||(12504610-12504690)
chr4 (475-511)||(23695143-23695179)
chr4 (500-560)||(25780519-25780579)
chr4 (468-547)||(27103068-27103148)
chr4 (492-532)||(35747502-35747542)
chr4 (475-547)||(41897522-41897594)
chr4 (468-504)||(42081801-42081837)
chr4 (479-511)||(46562702-46562734)
chr4 (468-511)||(49056834-49056878)
chr4 (469-541)||(50512389-50512461)
chr4 (470-569)||(53572296-53572396)
chr4 (479-547)||(55260292-55260360)
chr4 (479-547)||(55521442-55521510)
[»] chr7 (72 HSPs)
chr7 (466-573)||(22774037-22774144)
chr7 (451-547)||(40518840-40518936)
chr7 (468-560)||(28059756-28059848)
chr7 (469-557)||(41331048-41331136)
chr7 (447-557)||(45284766-45284876)
chr7 (467-564)||(27788275-27788372)
chr7 (467-564)||(27791431-27791528)
chr7 (480-557)||(37411717-37411794)
chr7 (451-574)||(12007746-12007868)
chr7 (468-560)||(7836904-7836996)
chr7 (447-560)||(12615761-12615875)
chr7 (447-569)||(15021158-15021280)
chr7 (449-547)||(35499560-35499658)
chr7 (468-557)||(36931986-36932075)
chr7 (452-560)||(28799971-28800081)
chr7 (468-573)||(41853994-41854099)
chr7 (468-574)||(6252074-6252181)
chr7 (467-574)||(10363386-10363493)
chr7 (467-545)||(22548236-22548314)
chr7 (480-570)||(41465834-41465924)
chr7 (454-570)||(4232556-4232673)
chr7 (469-569)||(9712166-9712267)
chr7 (468-557)||(12935753-12935842)
chr7 (468-577)||(23274782-23274891)
chr7 (452-547)||(28424282-28424378)
chr7 (452-572)||(36114293-36114413)
chr7 (467-530)||(46758282-46758346)
chr7 (447-543)||(47437961-47438057)
chr7 (467-552)||(10901662-10901749)
chr7 (468-547)||(27425111-27425190)
chr7 (478-557)||(35612545-35612624)
chr7 (468-547)||(38151367-38151446)
chr7 (453-539)||(47440762-47440849)
chr7 (469-539)||(25155572-25155642)
chr7 (469-506)||(1398872-1398909)
chr7 (472-545)||(4886864-4886936)
chr7 (495-574)||(24304306-24304386)
chr7 (452-547)||(28805323-28805419)
chr7 (480-547)||(7876022-7876088)
chr7 (478-557)||(9497979-9498058)
chr7 (468-503)||(12364816-12364851)
chr7 (468-511)||(34259714-34259757)
chr7 (468-530)||(35683094-35683157)
chr7 (478-557)||(48413904-48413983)
chr7 (468-511)||(49089559-49089602)
chr7 (447-572)||(3766809-3766935)
chr7 (468-541)||(7525473-7525547)
chr7 (471-557)||(7778967-7779053)
chr7 (478-572)||(9877245-9877339)
chr7 (478-572)||(23102536-23102630)
chr7 (468-541)||(13730065-13730138)
chr7 (469-541)||(18503448-18503521)
chr7 (479-572)||(23754993-23755086)
chr7 (468-572)||(35950126-35950231)
chr7 (467-511)||(46645768-46645813)
chr7 (452-547)||(10574-10670)
chr7 (468-547)||(1563706-1563786)
chr7 (468-511)||(10244856-10244900)
chr7 (447-502)||(11692458-11692514)
chr7 (467-506)||(13702089-13702129)
chr7 (462-502)||(14819110-14819150)
chr7 (462-502)||(15266108-15266148)
chr7 (462-502)||(15272893-15272933)
chr7 (478-530)||(16961602-16961654)
chr7 (470-569)||(24188471-24188571)
chr7 (468-572)||(27424837-27424941)
chr7 (468-570)||(29281309-29281413)
chr7 (479-511)||(34891265-34891297)
chr7 (468-547)||(36391871-36391951)
chr7 (479-559)||(42268122-42268202)
chr7 (447-506)||(44616666-44616726)
chr7 (468-547)||(48119493-48119573)
[»] chr5 (66 HSPs)
chr5 (467-557)||(23155906-23155996)
chr5 (469-553)||(37684515-37684599)
chr5 (469-553)||(37553894-37553978)
chr5 (452-560)||(15210800-15210908)
chr5 (462-573)||(4067979-4068090)
chr5 (467-578)||(24456182-24456291)
chr5 (449-560)||(33018475-33018585)
chr5 (447-540)||(39234686-39234779)
chr5 (449-573)||(3198324-3198448)
chr5 (451-547)||(28822707-28822803)
chr5 (471-560)||(17064829-17064918)
chr5 (468-573)||(36270738-36270843)
chr5 (466-557)||(10364317-10364405)
chr5 (483-573)||(9196095-9196185)
chr5 (451-557)||(17693137-17693242)
chr5 (468-572)||(6558799-6558904)
chr5 (447-544)||(41083485-41083581)
chr5 (452-539)||(885109-885197)
chr5 (468-540)||(8571823-8571895)
chr5 (468-547)||(20145532-20145611)
chr5 (447-547)||(8241073-8241174)
chr5 (448-505)||(24477890-24477947)
chr5 (467-547)||(28758384-28758465)
chr5 (467-530)||(3740994-3741058)
chr5 (452-572)||(12891555-12891675)
chr5 (468-555)||(12053479-12053566)
chr5 (452-543)||(12474009-12474099)
chr5 (469-547)||(3166004-3166082)
chr5 (470-543)||(7545367-7545441)
chr5 (468-530)||(27241681-27241743)
chr5 (467-536)||(7171762-7171831)
chr5 (453-545)||(7443364-7443457)
chr5 (468-572)||(15241394-15241499)
chr5 (468-547)||(18928743-18928823)
chr5 (468-544)||(32550202-32550278)
chr5 (468-548)||(37636828-37636908)
chr5 (469-572)||(40091475-40091579)
chr5 (471-506)||(831653-831688)
chr5 (468-511)||(9125721-9125764)
chr5 (472-511)||(14804954-14804993)
chr5 (468-511)||(16971679-16971722)
chr5 (467-511)||(17891824-17891870)
chr5 (472-547)||(20430588-20430663)
chr5 (452-548)||(25460731-25460828)
chr5 (447-570)||(38696691-38696813)
chr5 (452-505)||(1269118-1269172)
chr5 (468-557)||(3515433-3515522)
chr5 (492-573)||(4674835-4674917)
chr5 (454-503)||(6734692-6734742)
chr5 (447-572)||(11897246-11897372)
chr5 (451-509)||(23427051-23427109)
chr5 (468-541)||(30783681-30783755)
chr5 (479-541)||(32623422-32623484)
chr5 (452-541)||(36124428-36124518)
chr5 (469-547)||(36716827-36716905)
chr5 (471-541)||(40276413-40276483)
chr5 (448-505)||(28906871-28906928)
chr5 (448-505)||(28943266-28943323)
chr5 (468-552)||(41156346-41156431)
chr5 (467-506)||(3821387-3821427)
chr5 (468-504)||(11541755-11541791)
chr5 (478-570)||(14641087-14641179)
chr5 (468-511)||(16789129-16789173)
chr5 (467-499)||(29646080-29646112)
chr5 (467-530)||(33909045-33909109)
chr5 (468-547)||(36888362-36888442)
[»] chr1 (90 HSPs)
chr1 (447-573)||(47469020-47469146)
chr1 (448-556)||(26909818-26909926)
chr1 (448-567)||(33843143-33843262)
chr1 (448-567)||(33950717-33950836)
chr1 (448-573)||(11860039-11860164)
chr1 (468-558)||(23991232-23991322)
chr1 (469-557)||(10632707-10632796)
chr1 (468-545)||(31124606-31124683)
chr1 (447-547)||(11333687-11333787)
chr1 (447-547)||(11491708-11491808)
chr1 (449-573)||(30245973-30246097)
chr1 (467-547)||(37280725-37280804)
chr1 (468-547)||(36666544-36666623)
chr1 (468-574)||(1247251-1247357)
chr1 (448-542)||(3742265-3742359)
chr1 (467-557)||(25036229-25036319)
chr1 (467-557)||(25041441-25041531)
chr1 (448-570)||(31401193-31401315)
chr1 (467-573)||(49503117-49503223)
chr1 (447-557)||(51137797-51137907)
chr1 (468-569)||(34750359-34750458)
chr1 (469-544)||(7000931-7001006)
chr1 (468-573)||(26824188-26824293)
chr1 (452-547)||(8741496-8741592)
chr1 (468-560)||(34562755-34562847)
chr1 (449-545)||(41927001-41927097)
chr1 (472-548)||(45416150-45416226)
chr1 (468-560)||(50118982-50119074)
chr1 (462-556)||(11249413-11249506)
chr1 (451-560)||(17058715-17058823)
chr1 (469-547)||(18607778-18607856)
chr1 (467-560)||(42735891-42735985)
chr1 (469-547)||(43021591-43021669)
chr1 (472-545)||(19564125-19564197)
chr1 (468-548)||(34557291-34557372)
chr1 (447-547)||(24874994-24875094)
chr1 (452-547)||(37662508-37662604)
chr1 (453-547)||(2997609-2997704)
chr1 (469-544)||(16997228-16997303)
chr1 (453-511)||(18512527-18512586)
chr1 (472-547)||(24910450-24910525)
chr1 (469-560)||(27972170-27972260)
chr1 (452-511)||(36313931-36313990)
chr1 (468-546)||(36860622-36860701)
chr1 (468-557)||(39670797-39670883)
chr1 (452-530)||(50746751-50746830)
chr1 (468-506)||(7491825-7491863)
chr1 (453-514)||(22592533-22592595)
chr1 (447-548)||(23233973-23234075)
chr1 (478-572)||(42490388-42490482)
chr1 (468-572)||(6130000-6130105)
chr1 (468-572)||(12502221-12502326)
chr1 (467-539)||(12613208-12613281)
chr1 (468-572)||(21265654-21265759)
chr1 (468-505)||(27178676-27178713)
chr1 (492-576)||(29491460-29491545)
chr1 (468-560)||(621587-621679)
chr1 (485-557)||(5190766-5190838)
chr1 (468-511)||(12650351-12650395)
chr1 (485-557)||(44546034-44546106)
chr1 (471-547)||(51033987-51034063)
chr1 (448-543)||(17111265-17111360)
chr1 (467-534)||(17487562-17487629)
chr1 (492-574)||(39238708-39238791)
chr1 (471-513)||(4281439-4281480)
chr1 (471-572)||(8865852-8865954)
chr1 (472-506)||(13152975-13153009)
chr1 (448-506)||(28503477-28503535)
chr1 (469-511)||(35068746-35068788)
chr1 (478-572)||(44732631-44732725)
chr1 (479-540)||(993532-993593)
chr1 (483-536)||(10052454-10052507)
chr1 (447-547)||(15595748-15595849)
chr1 (448-505)||(16661318-16661375)
chr1 (467-511)||(18911910-18911955)
chr1 (468-572)||(22563384-22563489)
chr1 (468-572)||(32594249-32594354)
chr1 (479-560)||(33229656-33229736)
chr1 (468-572)||(33254726-33254831)
chr1 (468-572)||(33274898-33275003)
chr1 (466-514)||(34459520-34459569)
chr1 (468-560)||(51942305-51942397)
chr1 (480-557)||(52426893-52426970)
chr1 (468-511)||(7180581-7180625)
chr1 (452-511)||(12404414-12404474)
chr1 (468-572)||(23933036-23933140)
chr1 (471-511)||(24499784-24499824)
chr1 (478-530)||(26820638-26820690)
chr1 (468-547)||(34058237-34058317)
chr1 (493-545)||(40051486-40051538)
[»] chr2 (55 HSPs)
chr2 (449-544)||(3596276-3596371)
chr2 (467-560)||(15939299-15939393)
chr2 (468-574)||(20919606-20919712)
chr2 (469-554)||(1964369-1964454)
chr2 (467-547)||(2145701-2145782)
chr2 (472-545)||(44558027-44558100)
chr2 (468-557)||(44666311-44666400)
chr2 (468-560)||(37352461-37352553)
chr2 (468-511)||(4659467-4659510)
chr2 (471-541)||(13242702-13242772)
chr2 (467-560)||(3439329-3439421)
chr2 (471-572)||(7379571-7379672)
chr2 (454-530)||(7717558-7717635)
chr2 (471-547)||(2132739-2132815)
chr2 (472-572)||(3446728-3446828)
chr2 (448-547)||(28819495-28819595)
chr2 (468-511)||(44898449-44898493)
chr2 (468-511)||(4878268-4878311)
chr2 (468-547)||(32189970-32190049)
chr2 (452-547)||(44920038-44920132)
chr2 (448-573)||(17524836-17524960)
chr2 (467-560)||(36748897-36748990)
chr2 (475-573)||(41246383-41246481)
chr2 (468-572)||(1844815-1844920)
chr2 (481-534)||(11949977-11950030)
chr2 (467-504)||(22333841-22333878)
chr2 (462-530)||(27359665-27359733)
chr2 (468-572)||(33228900-33229005)
chr2 (467-530)||(5947906-5947970)
chr2 (467-506)||(20497161-20497201)
chr2 (467-547)||(23919444-23919524)
chr2 (452-543)||(39635327-39635419)
chr2 (468-547)||(3287024-3287103)
chr2 (447-557)||(5612967-5613078)
chr2 (468-514)||(16040297-16040344)
chr2 (479-530)||(17777142-17777193)
chr2 (462-511)||(18254648-18254698)
chr2 (470-572)||(24581434-24581536)
chr2 (468-502)||(27444327-27444361)
chr2 (447-572)||(36005440-36005566)
chr2 (468-572)||(2643695-2643800)
chr2 (472-545)||(3154022-3154095)
chr2 (468-572)||(3438946-3439051)
chr2 (492-573)||(23405193-23405274)
chr2 (467-511)||(23984189-23984234)
chr2 (479-548)||(25515999-25516067)
chr2 (467-511)||(32854591-32854636)
chr2 (469-545)||(431409-431484)
chr2 (471-558)||(2305083-2305171)
chr2 (468-511)||(11050724-11050768)
chr2 (468-511)||(16385009-16385053)
chr2 (471-511)||(25932595-25932635)
chr2 (468-511)||(28153109-28153153)
chr2 (468-511)||(28194691-28194735)
chr2 (473-541)||(37512349-37512417)
[»] chr8 (71 HSPs)
chr8 (468-574)||(12770364-12770470)
chr8 (468-557)||(43846948-43847037)
chr8 (467-574)||(41272090-41272197)
chr8 (471-573)||(481008-481110)
chr8 (478-570)||(10587255-10587347)
chr8 (447-557)||(25812156-25812266)
chr8 (452-545)||(42023435-42023529)
chr8 (475-560)||(6851001-6851086)
chr8 (468-569)||(10083164-10083265)
chr8 (468-557)||(11231433-11231522)
chr8 (448-547)||(26192664-26192763)
chr8 (462-548)||(550323-550409)
chr8 (452-574)||(2114880-2115001)
chr8 (468-541)||(7763906-7763980)
chr8 (452-572)||(2792777-2792898)
chr8 (468-557)||(25824870-25824959)
chr8 (447-560)||(38283134-38283247)
chr8 (448-560)||(15856454-15856566)
chr8 (474-574)||(22717787-22717887)
chr8 (447-541)||(3912110-3912205)
chr8 (468-549)||(31406778-31406859)
chr8 (468-572)||(34894367-34894472)
chr8 (480-557)||(40393331-40393408)
chr8 (468-544)||(3187385-3187461)
chr8 (468-547)||(2908059-2908138)
chr8 (467-573)||(13059143-13059250)
chr8 (468-563)||(20894667-20894761)
chr8 (480-547)||(25890384-25890451)
chr8 (468-511)||(31712608-31712651)
chr8 (486-573)||(42877031-42877117)
chr8 (471-557)||(20872430-20872515)
chr8 (482-560)||(29547375-29547452)
chr8 (447-547)||(27077043-27077144)
chr8 (467-511)||(31024353-31024398)
chr8 (451-544)||(31260896-31260989)
chr8 (454-530)||(34873126-34873203)
chr8 (468-572)||(38219535-38219640)
chr8 (467-572)||(41616333-41616438)
chr8 (467-511)||(44053406-44053451)
chr8 (467-560)||(44156722-44156814)
chr8 (468-511)||(2626032-2626076)
chr8 (471-519)||(4444311-4444358)
chr8 (467-506)||(33810704-33810744)
chr8 (467-530)||(36035145-36035209)
chr8 (452-511)||(41086673-41086733)
chr8 (469-505)||(41458360-41458396)
chr8 (492-574)||(2696525-2696608)
chr8 (468-514)||(10568141-10568188)
chr8 (468-511)||(22274579-22274622)
chr8 (452-514)||(26217847-26217910)
chr8 (468-570)||(37290922-37291025)
chr8 (468-511)||(44088924-44088967)
chr8 (492-569)||(7314730-7314808)
chr8 (478-572)||(8034390-8034484)
chr8 (468-506)||(8698548-8698586)
chr8 (467-560)||(13105101-13105195)
chr8 (471-569)||(22202714-22202811)
chr8 (467-545)||(26823695-26823773)
chr8 (468-569)||(31450924-31451026)
chr8 (468-505)||(3949049-3949086)
chr8 (468-572)||(5328534-5328639)
chr8 (468-541)||(5683783-5683856)
chr8 (468-572)||(8265266-8265371)
chr8 (467-511)||(37708750-37708795)
chr8 (468-572)||(37717361-37717466)
chr8 (462-545)||(14181303-14181387)
chr8 (471-547)||(22437762-22437837)
chr8 (468-547)||(32258030-32258110)
chr8 (469-557)||(37981208-37981295)
chr8 (471-530)||(42511553-42511613)
chr8 (471-511)||(44444603-44444643)
[»] chr6 (47 HSPs)
chr6 (456-556)||(9689259-9689359)
chr6 (469-554)||(34574123-34574209)
chr6 (468-560)||(8443549-8443641)
chr6 (468-560)||(8452353-8452445)
chr6 (448-569)||(606988-607109)
chr6 (471-547)||(17534870-17534946)
chr6 (447-547)||(24319036-24319136)
chr6 (447-547)||(23610266-23610366)
chr6 (447-511)||(29646495-29646559)
chr6 (447-547)||(32788801-32788901)
chr6 (468-570)||(32166369-32166472)
chr6 (518-573)||(32388223-32388278)
chr6 (468-557)||(2816903-2816993)
chr6 (468-574)||(11420955-11421060)
chr6 (453-530)||(18904305-18904383)
chr6 (454-514)||(5694970-5695030)
chr6 (489-557)||(24756909-24756977)
chr6 (447-535)||(35038649-35038737)
chr6 (447-547)||(2251861-2251963)
chr6 (468-547)||(34268305-34268384)
chr6 (467-573)||(4577756-4577861)
chr6 (468-506)||(31104946-31104984)
chr6 (478-547)||(978112-978181)
chr6 (448-557)||(32283551-32283660)
chr6 (467-510)||(1368153-1368197)
chr6 (522-573)||(25088280-25088331)
chr6 (474-545)||(33882656-33882727)
chr6 (519-557)||(7771300-7771338)
chr6 (447-572)||(31802051-31802177)
chr6 (479-560)||(361173-361254)
chr6 (467-511)||(2711489-2711534)
chr6 (478-547)||(3294787-3294856)
chr6 (468-572)||(8297625-8297730)
chr6 (517-570)||(16179021-16179074)
chr6 (467-503)||(28021299-28021336)
chr6 (471-536)||(31952303-31952368)
chr6 (467-503)||(32621548-32621585)
chr6 (468-547)||(33646857-33646938)
chr6 (452-511)||(2426123-2426183)
chr6 (468-547)||(2500481-2500561)
chr6 (468-556)||(3298935-3299023)
chr6 (487-539)||(7897105-7897157)
chr6 (468-511)||(13158676-13158720)
chr6 (468-511)||(13163532-13163576)
chr6 (483-539)||(13656297-13656353)
chr6 (468-511)||(30705019-30705063)
chr6 (467-574)||(32670020-32670128)
[»] scaffold0246 (1 HSPs)
scaffold0246 (447-557)||(24393-24503)
[»] scaffold0154 (1 HSPs)
scaffold0154 (467-567)||(28788-28888)
[»] scaffold0009 (1 HSPs)
scaffold0009 (468-575)||(41621-41722)
[»] scaffold0519 (1 HSPs)
scaffold0519 (468-557)||(2930-3019)
[»] scaffold0250 (1 HSPs)
scaffold0250 (468-547)||(15028-15107)
[»] scaffold0264 (1 HSPs)
scaffold0264 (471-548)||(20299-20376)
[»] scaffold0010 (1 HSPs)
scaffold0010 (469-547)||(236326-236402)
[»] scaffold0088 (1 HSPs)
scaffold0088 (468-572)||(10793-10898)
[»] scaffold0014 (1 HSPs)
scaffold0014 (469-541)||(197059-197131)
[»] scaffold0999 (1 HSPs)
scaffold0999 (472-506)||(2239-2273)
[»] scaffold0031 (1 HSPs)
scaffold0031 (478-511)||(93960-93993)
[»] scaffold1005 (1 HSPs)
scaffold1005 (468-504)||(2898-2934)
[»] scaffold0157 (1 HSPs)
scaffold0157 (468-547)||(15787-15867)
[»] scaffold0117 (1 HSPs)
scaffold0117 (468-511)||(18446-18490)
[»] scaffold0078 (1 HSPs)
scaffold0078 (480-556)||(20424-20500)


Alignment Details
Target: chr3 (Bit Score: 478; Significance: 0; HSPs: 84)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 478; E-Value: 0
Query Start/End: Original strand, 19 - 602
Target Start/End: Original strand, 46816869 - 46817453
Alignment:
Q  19 tgagcagctttttaaaacattaccagcttactttaaccattgcaccagctgatatgggacttagacaaacatatgcacacaaataacctttttgtttctt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  46816869 tgagcagctttttaaaacattaccagcttactttaaccattgcaccagctgatgtgggacttagacaaacatatgcacacaaataacctttttgtttctt 46816968  T
Q  119 gtgttcgcatgttcttctacaaataatttattgtcgtcacaattcttcaagttcacaaatatgtttaacctttttcttcttcctttcatacatttcaaat 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46816969 gtgttcgcatgttcttctacaaataatttattgtcgtcacaattcttcaagttcacaaatatgtttaacctttttcttcttcctttcatacatttcaaat 46817068  T
Q  219 cattgaaattatcattacttaaagcatatcaaaaggattattttagtatagatttcatggatcatatacagaactttaaaaccaaccacgagccttgcct 318  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  46817069 cattgaaattatcattacctaaagcatatcaaaaggattattttagtatagatttcatggatcatatacagaactttaaaaccaaccactagccttgcct 46817168  T
Q  319 tctcattttgtggttgcttcaataccatatttagtggaaattatcaagcaaatgagagcactatttgtaattattactaaccagtaaaccggttaaatga 418  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46817169 tctcattttgtggttgcttcaataccatatttagtggaaattatcaagcaaatgagagcactatttgtaattattactaaccagtaaaccggttaaatga 46817268  T
Q  419 agtgaatccacctaa-nnnnnnnnnnnnnggtctagtagtctattggtcggagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatct 517  Q
    |||||||||||||||               |||||||||| || |||||| |||||||||||||||||||||||||||||||||| ||| ||||||| |     
T  46817269 agtgaatccacctaatttttttttttttttgtctagtagtttagtggtcgaagctcacacatttaaatgtggagaagtggggtgttcggggttcaaaccc 46817368  T
Q  518 cgacctctgcataaattatgcaatgtccctgtcaattgagttatgcttacggggacagaatccacctaatttctattagtattat 602  Q
    | |||||| |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  46817369 caacctctacataaattatgcaatgtctctgtcaattgagctatgcttacggggacagaatccacctaatttctattagtattat 46817453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 32 - 427
Target Start/End: Original strand, 46818685 - 46819040
Alignment:
Q  32 aaaacattaccagcttactttaaccattgcaccagctgatatgggacttagacaaaca---tatgcacacaaataacctttttgtttcttgtgttcgcat 128  Q
    |||||||||||| ||||||||||||||||||||||| ||| ||||||||||| |||||   ||||||||||||||||||||||||||||||||||| | |    
T  46818685 aaaacattaccaacttactttaaccattgcaccagccgatgtgggacttagataaacaacgtatgcacacaaataacctttttgtttcttgtgttc-cct 46818783  T
Q  129 gttcttctacaaataatttattgtcgtcacaattcttcaagttcacaaatatgtttaacctttttcttcttcctttcatacatttcaaatcattgaaatt 228  Q
    |||||||||||||||      |||  || |    ||     ||||||||||||||||| |||||||||||||||||||||||||||||||||||  ||||    
T  46818784 gttcttctacaaata------tgttctccc----ct----attcacaaatatgtttaatctttttcttcttcctttcatacatttcaaatcatt-taatt 46818868  T
Q  229 atcattacttaaagcatatcaaaaggattattttagtatagatttcatggatcatatacagaactttaaaaccaaccacgagccttgccttctcattttg 328  Q
    ||||||| |  ||| ||||||||| |||||  |||||| || ||       ||||||| ||||||||||||||| ||||              | || ||    
T  46818869 atcattaatcgaagtatatcaaaaagatta--ttagtagaggtt-------tcatatatagaactttaaaaccagccac--------------ctttctg 46818945  T
Q  329 tggttgcttcaataccatatttagtggaaattatcaagcaaatgagagcactatttgtaattattactaaccagtaaaccggttaaatgaagtgaatcc 427  Q
    ||||||||||||| ||||||||| ||||||||||||||| |||||||||||| ||||    |||||||||||| |||||||||||||||||| ||||||    
T  46818946 tggttgcttcaatgccatatttaatggaaattatcaagccaatgagagcactgtttg----tattactaaccaataaaccggttaaatgaagggaatcc 46819040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 448 - 574
Target Start/End: Original strand, 19222534 - 19222660
Alignment:
Q  448 gtctagtagtctattggtcggagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccct 547  Q
    ||||||||| ||| | | ||||||||||||| ||||||||||||||||||||||||||| |||| || | || || ||||||||||||||||||||||||    
T  19222534 gtctagtagcctaatagccggagctcacacaattaaatgtggagaagtggggtgtccggggttcgaaccccggcccctgcataaattatgcaatgtccct 19222633  T
Q  548 gtcaattgagttatgcttacggggaca 574  Q
    | ||| ||||||| ||| ||| |||||    
T  19222634 gccaactgagttaagctcacgcggaca 19222660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 467 - 573
Target Start/End: Original strand, 46844938 - 46845044
Alignment:
Q  467 ggagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagttatgctta 566  Q
    ||||||||||||||||||||||||||||| |||||||||| |||| ||   ||||| ||||||||||||||||||||||||| |||||||| || ||| |    
T  46844938 ggagctcacacatttaaatgtggagaagtagggtgtccggggttcgaactccgacccctgcataaattatgcaatgtccctgccaattgagctaagctca 46845037  T
Q  567 cggggac 573  Q
    |||||||    
T  46845038 cggggac 46845044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 468 - 573
Target Start/End: Complemental strand, 24303492 - 24303387
Alignment:
Q  468 gagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagttatgcttac 567  Q
    ||||||||||| ||||||||||||||||||||||||||| |||| || | || || ||||||||||||||||||||||||| ||| |||| || ||| ||    
T  24303492 gagctcacacaattaaatgtggagaagtggggtgtccggggttcgaaccccggcccctgcataaattatgcaatgtccctgccaactgagctaagctcac 24303393  T
Q  568 ggggac 573  Q
    ||||||    
T  24303392 ggggac 24303387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 468 - 557
Target Start/End: Original strand, 49443391 - 49443480
Alignment:
Q  468 gagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgag 557  Q
    ||||||||||||||||||||||||||||||||||||||| |||| ||   || || ||||||||||||||||||||||||| ||||||||    
T  49443391 gagctcacacatttaaatgtggagaagtggggtgtccggggttcgaactccggcccctgcataaattatgcaatgtccctgccaattgag 49443480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 447 - 575
Target Start/End: Complemental strand, 9685119 - 9684991
Alignment:
Q  447 ggtctagtagtctattggtcggagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccc 546  Q
    |||||||||| ||| |||  ||||||||||||||||||| ||||||||||| |||| |||  ||| || | |  || |||||||||||||||||||||||    
T  9685119 ggtctagtagcctagtggctggagctcacacatttaaatatggagaagtggagtgttcgggattcgaaccccagcccctgcataaattatgcaatgtccc 9685020  T
Q  547 tgtcaattgagttatgcttacggggacag 575  Q
    || |||||||| |||||| ||||||||||    
T  9685019 tgccaattgagctatgctcacggggacag 9684991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 450 - 545
Target Start/End: Complemental strand, 26880297 - 26880202
Alignment:
Q  450 ctagtagtctattggtcggagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtcc 545  Q
    ||||||| ||| ||||  |||||||||||||||||||||||||||||||||||| | ||||| || | ||||| ||||||||||||||||||||||    
T  26880297 ctagtagcctaatggttagagctcacacatttaaatgtggagaagtggggtgtctgaagttcgaaccccgacccctgcataaattatgcaatgtcc 26880202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 471 - 557
Target Start/End: Complemental strand, 43280167 - 43280081
Alignment:
Q  471 ctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgag 557  Q
    ||||||||||||||||||||||||||||||||||||  ||| || | || || ||||||||||||||||||||||||| ||||||||    
T  43280167 ctcacacatttaaatgtggagaagtggggtgtccgggattcgaaccccggcccctgcataaattatgcaatgtccctgccaattgag 43280081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 448 - 557
Target Start/End: Original strand, 54408498 - 54408607
Alignment:
Q  448 gtctagtagtctattggtcggagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccct 547  Q
    ||||||||| ||| ||||  ||||||||| | ||||||||||| || |||||||||||| |||| || | ||||||||||||||||||||||||||||||    
T  54408498 gtctagtagcctagtggttagagctcacataattaaatgtggaaaaatggggtgtccggggttcgaaccccgacctctgcataaattatgcaatgtccct 54408597  T
Q  548 gtcaattgag 557  Q
    | ||| ||||    
T  54408598 gccaaatgag 54408607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 451 - 547
Target Start/End: Original strand, 4227695 - 4227791
Alignment:
Q  451 tagtagtctattggtcggagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccct 547  Q
    |||||||||| |||   ||||||||||| |||| | ||||||||||||||||||||||||| || | ||||| ||||||||||||||||||||||||    
T  4227695 tagtagtctaatggctagagctcacacaattaattatggagaagtggggtgtccggagttcgaaccccgacccctgcataaattatgcaatgtccct 4227791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 448 - 566
Target Start/End: Complemental strand, 27837387 - 27837270
Alignment:
Q  448 gtctagtagtctattggtcggagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccct 547  Q
    ||||||||| ||| ||||  ||||||||||||||||||||  |||| |||| |||||||||||| || | | ||| ||||||||||||| ||||||| ||    
T  27837387 gtctagtagcctagtggttagagctcacacatttaaatgta-agaaatgggatgtccggagttcgaaccccaacccctgcataaattatacaatgtctct 27837289  T
Q  548 gtcaattgagttatgctta 566  Q
     ||||||||||||||||||    
T  27837288 atcaattgagttatgctta 27837270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 472 - 573
Target Start/End: Original strand, 48515357 - 48515458
Alignment:
Q  472 tcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagttatgcttacgggg 571  Q
    ||||||||||||||||||||||||| ||||||||| |||| || ||||||| |||||||||||||| ||| |||||  ||| ||||||| ||| || |||    
T  48515357 tcacacatttaaatgtggagaagtgtggtgtccggggttcgaacctcgacccctgcataaattatggaatatccctaccaactgagttaagctcacaggg 48515456  T
Q  572 ac 573  Q
    ||    
T  48515457 ac 48515458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 447 - 547
Target Start/End: Complemental strand, 38949797 - 38949697
Alignment:
Q  447 ggtctagtagtctattggtcggagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccc 546  Q
    |||||||||| ||| |||  |||||||||||  ||||||||||||||||||||||| ||| |||| || | || || |||||||||||||||||||||||    
T  38949797 ggtctagtagcctagtggctggagctcacactattaaatgtggagaagtggggtgttcggggttcgaaccccggcccctgcataaattatgcaatgtccc 38949698  T
Q  547 t 547  Q
    |    
T  38949697 t 38949697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 469 - 544
Target Start/End: Complemental strand, 4396723 - 4396648
Alignment:
Q  469 agctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtc 544  Q
    ||||||| ||||||||| ||||||||||| ||||||||||||| || |||| ||||||||||||||| ||||||||    
T  4396723 agctcacgcatttaaatatggagaagtggagtgtccggagttcgaacctcgccctctgcataaattaagcaatgtc 4396648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 471 - 574
Target Start/End: Complemental strand, 11995230 - 11995127
Alignment:
Q  471 ctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagttatgcttacggg 570  Q
    |||||||| |||||||||||||| || |||||||||||||  || |||| ||||| ||||||||||||||||||||| |||| |||  || ||| |||||    
T  11995230 ctcacacaattaaatgtggagaaatgaggtgtccggagtttgaacctcggcctctacataaattatgcaatgtccctatcaactgaactaagctcacggg 11995131  T
Q  571 gaca 574  Q
    ||||    
T  11995130 gaca 11995127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 468 - 547
Target Start/End: Complemental strand, 49577471 - 49577392
Alignment:
Q  468 gagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccct 547  Q
    ||||||||||| |||||| ||||||||||||||||| || ||| ||| | ||||| ||||||||||||||||||||||||    
T  49577471 gagctcacacaattaaatatggagaagtggggtgtctggggtttaaaccccgaccgctgcataaattatgcaatgtccct 49577392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 451 - 557
Target Start/End: Complemental strand, 47098635 - 47098529
Alignment:
Q  451 tagtagtctattggtcggagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtc 550  Q
    |||||||||| |||  |||||||||| | ||||||||||||||||| |||||| || |||| || |||| || ||||||||||||| |||||||||| ||    
T  47098635 tagtagtctagtggctggagctcacataattaaatgtggagaagtgaggtgtctggggttcgaacctcggcccctgcataaattatacaatgtccctatc 47098536  T
Q  551 aattgag 557  Q
    || ||||    
T  47098535 aactgag 47098529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 468 - 573
Target Start/End: Complemental strand, 28951818 - 28951713
Alignment:
Q  468 gagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagttatgcttac 567  Q
    ||||||||||||||||||||| ||| |||||||||| || |||| || | |  || |||||||||||||||||||||| || ||||||||||| ||| |     
T  28951818 gagctcacacatttaaatgtgaagatgtggggtgtctggggttcgaaccccagcccctgcataaattatgcaatgtccttgccaattgagttaagctcat 28951719  T
Q  568 ggggac 573  Q
    ||||||    
T  28951718 ggggac 28951713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 467 - 547
Target Start/End: Complemental strand, 32401593 - 32401514
Alignment:
Q  467 ggagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccct 547  Q
    |||||||||||| ||||||||||||| ||||||||||||| |||| || | ||||| ||||||||||||| ||||||||||    
T  32401593 ggagctcacacaattaaatgtggagatgtggggtgtccggggttcgaa-cccgacccctgcataaattatacaatgtccct 32401514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 468 - 568
Target Start/End: Original strand, 52992027 - 52992127
Alignment:
Q  468 gagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagttatgcttac 567  Q
    ||||||||||| |||||| |||||||||||||||||  | |||| |||| |||||  ||||||||||||||||| |||||  ||| ||||||| ||||||    
T  52992027 gagctcacacaattaaatatggagaagtggggtgtcgagggttcgaatcccgacccttgcataaattatgcaatatccctaccaactgagttaagcttac 52992126  T
Q  568 g 568  Q
    |    
T  52992127 g 52992127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 470 - 556
Target Start/End: Original strand, 7253490 - 7253576
Alignment:
Q  470 gctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattga 556  Q
    ||||||||| ||||||| ||||||||||||||||||| |||  || || || | ||||||||||||||||||||||||  |||||||    
T  7253490 gctcacacaattaaatgcggagaagtggggtgtccggggtttgaaccttgatccctgcataaattatgcaatgtccctaccaattga 7253576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 471 - 560
Target Start/End: Original strand, 29559644 - 29559734
Alignment:
Q  471 ctcacacattt-aaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagtta 560  Q
    ||||||||||| |||||||||||||||||||||||| |||||||| | |||||||| |||| | |||||||| |||||  ||| |||||||    
T  29559644 ctcacacattttaaatgtggagaagtggggtgtccgaagttcaaaccccgacctctacatataatatgcaatatccctaccaactgagtta 29559734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 447 - 544
Target Start/End: Original strand, 5173957 - 5174054
Alignment:
Q  447 ggtctagtagtctattggtcggagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtc 544  Q
    |||||||||| ||| |||   ||||||||||| ||||||||||||||||||||||| ||| |||| || | |  || |||||||||||||||||||||    
T  5173957 ggtctagtagcctagtggctagagctcacacaattaaatgtggagaagtggggtgttcggggttcgaacccctgcccctgcataaattatgcaatgtc 5174054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 467 - 564
Target Start/End: Original strand, 10952272 - 10952369
Alignment:
Q  467 ggagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagttatgct 564  Q
    |||||||||||||| ||| ||||| |||||||||||| || |||| || |  | || |||||||||||||| |||||||||| |||||||| ||||||    
T  10952272 ggagctcacacattaaaacgtggataagtggggtgtcgggggttcgaacccaggcccctgcataaattatgtaatgtccctgccaattgagctatgct 10952369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 468 - 557
Target Start/End: Original strand, 18764836 - 18764924
Alignment:
Q  468 gagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgag 557  Q
    |||||||||||||||||||| ||||||| |||||||| | |||| || |  |||| |||||||||||||||||||||| || ||||||||    
T  18764836 gagctcacacatttaaatgtagagaagt-gggtgtccagtgttcgaaccctgaccactgcataaattatgcaatgtccttgccaattgag 18764924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 467 - 539
Target Start/End: Original strand, 25883954 - 25884027
Alignment:
Q  467 ggagctcacacattt-aaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgca 539  Q
    ||||||||||||||| ||||||||||||||||||||||||| |||| || | ||||| ||||||| ||||||||    
T  25883954 ggagctcacacattttaaatgtggagaagtggggtgtccggggttcgaaccccgacccctgcatatattatgca 25884027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 447 - 544
Target Start/End: Complemental strand, 35849604 - 35849507
Alignment:
Q  447 ggtctagtagtctattggtcggagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtc 544  Q
    ||||||||||| || |||  |||||||||||| ||||||| |||||||||||||||  || |||| || | || || |||||||||||||||||||||    
T  35849604 ggtctagtagtttagtggctggagctcacacaattaaatggggagaagtggggtgtttggggttcgaaccccggcccctgcataaattatgcaatgtc 35849507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 467 - 530
Target Start/End: Complemental strand, 9114115 - 9114051
Alignment:
Q  467 ggagctcacacattt-aaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcata 530  Q
    ||||||||||||||| |||||||||||||||||||||| ||| ||| |||||||||| |||||||    
T  9114115 ggagctcacacattttaaatgtggagaagtggggtgtctggaattcgaatctcgacccctgcata 9114051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 454 - 541
Target Start/End: Complemental strand, 22857510 - 22857423
Alignment:
Q  454 tagtctattggtcggagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaat 541  Q
    ||||||||||||   |||||||||||||||||||||| ||||||||||| ||| | |||||  ||| |||||||||| | ||||||||    
T  22857510 tagtctattggttaaagctcacacatttaaatgtggaaaagtggggtgttcggggctcaaacatcggcctctgcatataatatgcaat 22857423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 468 - 547
Target Start/End: Complemental strand, 44764822 - 44764745
Alignment:
Q  468 gagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccct 547  Q
    ||||||||||| |||||||||||||||||| |||||||| |||| || | || || ||||||||||||||||||||||||    
T  44764822 gagctcacacaattaaatgtggagaagtggagtgtccggggttcgaa-cccg-cccctgcataaattatgcaatgtccct 44764745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 468 - 572
Target Start/End: Original strand, 41936374 - 41936479
Alignment:
Q  468 gagctcacaca-tttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagttatgctta 566  Q
    ||||||||||| ||||| |||||||||||||||||||||| |||| || | || || ||||||| | |||||||| |||||  ||| |||| || |||||    
T  41936374 gagctcacacaatttaattgtggagaagtggggtgtccggggttcgaaccccggcccctgcatataatatgcaatatccctaccaactgagctaagctta 41936473  T
Q  567 cgggga 572  Q
    ||||||    
T  41936474 cgggga 41936479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 468 - 547
Target Start/End: Complemental strand, 32776314 - 32776234
Alignment:
Q  468 gagctcacacatttaaat-gtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccct 547  Q
    ||||||||||| |||||| | ||||||||| ||||||||| |||| || | || || ||||||||||||||||||||||||    
T  32776314 gagctcacacaattaaattggggagaagtgaggtgtccggggttcgaaccccggcccctgcataaattatgcaatgtccct 32776234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 479 - 543
Target Start/End: Original strand, 55383867 - 55383931
Alignment:
Q  479 tttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgt 543  Q
    ||||||||||||||||||||||||| || |||| || | |  |||||||||||||||||||||||    
T  55383867 tttaaatgtggagaagtggggtgtcaggggttcgaacccctgcctctgcataaattatgcaatgt 55383931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 449 - 543
Target Start/End: Complemental strand, 15006063 - 15005968
Alignment:
Q  449 tctagtagtctattggtcggagctcacacatttaaatgtggagaagtg-gggtgtccggagttcaaatctcgacctctgcataaattatgcaatgt 543  Q
    ||||||||| || ||||  |||||||| || ||||||||||||||||| || |||||||||||| || | || |  ||||||||||||||||||||    
T  15006063 tctagtagtttagtggttagagctcactcaattaaatgtggagaagtgtggatgtccggagttcgaaccccggctcctgcataaattatgcaatgt 15005968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 468 - 543
Target Start/End: Original strand, 23653184 - 23653259
Alignment:
Q  468 gagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgt 543  Q
    |||||||||||||| |||||||| ||||| ||||| ||| |||| || | ||||| ||||||| ||||||||||||    
T  23653184 gagctcacacattttaatgtggataagtgaggtgttcggggttcgaaccccgacccctgcatatattatgcaatgt 23653259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 447 - 560
Target Start/End: Complemental strand, 37740889 - 37740776
Alignment:
Q  447 ggtctagtagtctattggtcggagctcacacatttaaatgtggagaagtggggtgtccggagttc-aaatctcgacctctgcataaattatgcaatgtcc 545  Q
    |||||||||||||| |||  |||| ||||||| ||||||||||| ||||| ||||||||  |||| || ||| |||  ||||| |||||||| |||||||    
T  37740889 ggtctagtagtctagtggctggagttcacacaattaaatgtggaaaagtgaggtgtccgaggttcgaactct-gactcctgcaaaaattatgtaatgtcc 37740791  T
Q  546 ctgtcaattgagtta 560  Q
    ||  |||||||||||    
T  37740790 ctaccaattgagtta 37740776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 471 - 541
Target Start/End: Original strand, 41411598 - 41411668
Alignment:
Q  471 ctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaat 541  Q
    |||||||| ||||||||||||||| ||||||||||| |||  || | ||| | ||||||||||||||||||    
T  41411598 ctcacacaattaaatgtggagaagcggggtgtccggggtttgaaccccgaaccctgcataaattatgcaat 41411668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 462 - 506
Target Start/End: Complemental strand, 14795220 - 14795175
Alignment:
Q  462 tggtcggagctcacacattt-aaatgtggagaagtggggtgtccgg 506  Q
    |||| ||||||||||||||| |||||||||||||||||||||||||    
T  14795220 tggttggagctcacacattttaaatgtggagaagtggggtgtccgg 14795175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 468 - 516
Target Start/End: Original strand, 25279026 - 25279075
Alignment:
Q  468 gagctcacaca-tttaaatgtggagaagtggggtgtccggagttcaaatc 516  Q
    ||||||||||| ||||| |||||||||||||||||||||| |||||||||    
T  25279026 gagctcacacaatttaattgtggagaagtggggtgtccggggttcaaatc 25279075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 467 - 511
Target Start/End: Original strand, 27329898 - 27329943
Alignment:
Q  467 ggagctcacacattt-aaatgtggagaagtggggtgtccggagttc 511  Q
    ||||||||||||||| ||||||||||||||||||||||||| ||||    
T  27329898 ggagctcacacattttaaatgtggagaagtggggtgtccggggttc 27329943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 451 - 543
Target Start/End: Complemental strand, 29531333 - 29531241
Alignment:
Q  451 tagtagtctattggtcggagctcacacatttaaatgtggagaagtg-gggtgtccggagttcaaatctcgacctctgcataaattatgcaatgt 543  Q
    |||||||||| ||||  ||||||||||| ||||||||||||||||| || ||||||| | || || | ||||| || |||||||||||||||||    
T  29531333 tagtagtctagtggttagagctcacacaattaaatgtggagaagtgaggttgtccgg-ggtcgaaccccgaccccttcataaattatgcaatgt 29531241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 471 - 572
Target Start/End: Complemental strand, 40192255 - 40192154
Alignment:
Q  471 ctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagttatgcttacggg 570  Q
    |||||||| |||||||||||||||||| ||||||||  ||| ||   ||||||||||||| | |||||||| |||||  ||| |||| || ||| |||||    
T  40192255 ctcacacaattaaatgtggagaagtggagtgtccgggattcgaacaccgacctctgcatataatatgcaatatccctaccaactgagctaagctcacggg 40192156  T
Q  571 ga 572  Q
    ||    
T  40192155 ga 40192154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 474 - 547
Target Start/End: Original strand, 49983682 - 49983755
Alignment:
Q  474 acacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccct 547  Q
    ||||| |||| ||||||||||| |||||||||| |||| || | | ||| ||||||||||||| ||||||||||    
T  49983682 acacaattaattgtggagaagtagggtgtccggggttcgaaccccaacccctgcataaattatacaatgtccct 49983755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 467 - 511
Target Start/End: Complemental strand, 51879199 - 51879154
Alignment:
Q  467 ggagctcacacattt-aaatgtggagaagtggggtgtccggagttc 511  Q
    ||||||||||||||| ||||||||||||||||||||||||| ||||    
T  51879199 ggagctcacacattttaaatgtggagaagtggggtgtccggggttc 51879154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 468 - 560
Target Start/End: Original strand, 53432704 - 53432797
Alignment:
Q  468 gagctcacaca-tttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagtta 560  Q
    ||||||||||| ||||| |||||||||||||||||||||| |||| || | || || ||||||| | |||||||| |||||  ||| |||||||    
T  53432704 gagctcacacaatttaattgtggagaagtggggtgtccggggttcgaaccccggcccctgcatataatatgcaatatccctaccaactgagtta 53432797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 468 - 505
Target Start/End: Original strand, 54769798 - 54769835
Alignment:
Q  468 gagctcacacatttaaatgtggagaagtggggtgtccg 505  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  54769798 gagctcacacaattaaatgtggagaagtggggtgtccg 54769835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 468 - 547
Target Start/End: Original strand, 17602643 - 17602723
Alignment:
Q  468 gagctcacaca-tttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccct 547  Q
    ||||||||||| ||||| |||||||||||||||||||||| |||| || |||| || || |||| | |||||||| |||||    
T  17602643 gagctcacacaatttaattgtggagaagtggggtgtccggggttcgaacctcggcccctacatataatatgcaatatccct 17602723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 468 - 547
Target Start/End: Original strand, 34102578 - 34102658
Alignment:
Q  468 gagctcacaca-tttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccct 547  Q
    ||||||||||| ||||| |||||||||||||||||||||| |||| || | || || ||||||| | |||||||| |||||    
T  34102578 gagctcacacagtttaattgtggagaagtggggtgtccggggttcgaaccccggcccctgcatataatatgcaatatccct 34102658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 449 - 516
Target Start/End: Complemental strand, 36666582 - 36666514
Alignment:
Q  449 tctagtagtctattggtcggagctcacacatt-taaatgtggagaagtggggtgtccggagttcaaatc 516  Q
    |||||||||||| ||||  ||||||| ||||| ||||||||||||||||||||||| || |||| ||||    
T  36666582 tctagtagtctagtggttagagctcatacattataaatgtggagaagtggggtgtctggggttcgaatc 36666514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 468 - 547
Target Start/End: Complemental strand, 39720038 - 39719958
Alignment:
Q  468 gagctcacaca-tttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccct 547  Q
    ||||||||||| ||||| |||||||||||||||||||||| |||| || | || || ||||||| | |||||||| |||||    
T  39720038 gagctcacacaatttaattgtggagaagtggggtgtccggggttcgaaccccggcccctgcatataatatgcaatatccct 39719958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 472 - 572
Target Start/End: Original strand, 44651954 - 44652054
Alignment:
Q  472 tcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagttatgcttacgggg 571  Q
    |||||||| |||||||||||||||||||| ||||| |||| || |||| |  ||||||| | |||||||| |||||  ||| |||| || ||| ||||||    
T  44651954 tcacacatataaatgtggagaagtggggtatccggggttcgaacctcggctcctgcatataatatgcaatatccctaccaactgagctaagctcacgggg 44652053  T
Q  572 a 572  Q
    |    
T  44652054 a 44652054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 475 - 571
Target Start/End: Original strand, 52309085 - 52309181
Alignment:
Q  475 cacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagttatgcttacgggg 571  Q
    |||| |||||||||||||||||||||||| || |||| || | ||||  ||||||| | |||||||| |||||  ||| ||||||| ||| ||||||    
T  52309085 cacaattaaatgtggagaagtggggtgtctggggttcgaaccccgactcctgcatatagtatgcaatatccctaccaactgagttaagctcacgggg 52309181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 453 - 511
Target Start/End: Original strand, 44625177 - 44625236
Alignment:
Q  453 gtagtctattggtcggagctcacacattt-aaatgtggagaagtggggtgtccggagttc 511  Q
    |||| ||| |||| ||||||| ||||||| ||||||||||||||||||||||||| ||||    
T  44625177 gtagcctagtggttggagctcccacattttaaatgtggagaagtggggtgtccggggttc 44625236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 468 - 541
Target Start/End: Original strand, 2007050 - 2007124
Alignment:
Q  468 gagctcacaca-tttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaat 541  Q
    ||||||||||| ||||| ||||||||||||| |||||||| ||||||| | ||||  ||||||| | ||||||||    
T  2007050 gagctcacacaatttaattgtggagaagtggagtgtccggggttcaaaccccgactcctgcatataatatgcaat 2007124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 492 - 577
Target Start/End: Original strand, 6951811 - 6951895
Alignment:
Q  492 aagtggggtgtccggagttcaaatctcgacctctgcata-aattatgcaatgtccctgtcaattgagttatgcttacggggacagaa 577  Q
    ||||| ||||||||  ||||||||| ||||| ||||||| ||| ||||| |||||||||||| ||||||||||| ||||||| ||||    
T  6951811 aagtgcggtgtccgaggttcaaatc-cgacccctgcatataataatgca-tgtccctgtcaactgagttatgctcacggggatagaa 6951895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 492 - 569
Target Start/End: Original strand, 36331746 - 36331824
Alignment:
Q  492 aagtggggtgtccggagttcaaatctcgacctctgcata-aattatgcaatgtccctgtcaattgagttatgcttacgg 569  Q
    ||||||||||||||| |||| || | ||||| ||||||| ||| ||||| |||||||| |||||||| |||||| ||||    
T  36331746 aagtggggtgtccggggttcgaaccccgacccctgcatataataatgcattgtccctgccaattgagctatgctcacgg 36331824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 468 - 502
Target Start/End: Complemental strand, 43645177 - 43645143
Alignment:
Q  468 gagctcacacatttaaatgtggagaagtggggtgt 502  Q
    |||||||||| ||||||||||||||||||||||||    
T  43645177 gagctcacacgtttaaatgtggagaagtggggtgt 43645143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 479 - 545
Target Start/End: Complemental strand, 54897408 - 54897342
Alignment:
Q  479 tttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtcc 545  Q
    |||||||||||| ||||| ||||||  |||||| |||| | |||||| ||| |||||||||||||||    
T  54897408 tttaaatgtggaaaagtgaggtgtcaagagttcgaatccctacctctacattaattatgcaatgtcc 54897342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 482 - 547
Target Start/End: Original strand, 3614062 - 3614127
Alignment:
Q  482 aaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccct 547  Q
    |||| ||||||||||||||||| || |||| || | |  || ||||||||||||||||||||||||    
T  3614062 aaatatggagaagtggggtgtcaggggttcgaacccctgcccctgcataaattatgcaatgtccct 3614127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 447 - 503
Target Start/End: Complemental strand, 4860285 - 4860228
Alignment:
Q  447 ggtctagtagtctattggtcggagctcacaca-tttaaatgtggagaagtggggtgtc 503  Q
    |||| ||||||||| ||||  ||||||||||| ||||| |||||||||||||||||||    
T  4860285 ggtcaagtagtctagtggttagagctcacacaatttaattgtggagaagtggggtgtc 4860228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 447 - 503
Target Start/End: Complemental strand, 4880293 - 4880236
Alignment:
Q  447 ggtctagtagtctattggtcggagctcacaca-tttaaatgtggagaagtggggtgtc 503  Q
    |||| ||||||||| ||||  ||||||||||| ||||| |||||||||||||||||||    
T  4880293 ggtcaagtagtctagtggttagagctcacacaatttaattgtggagaagtggggtgtc 4880236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 525 - 570
Target Start/End: Complemental strand, 10350569 - 10350524
Alignment:
Q  525 tgcataaattatgcaatgtccctgtcaattgagttatgcttacggg 570  Q
    ||||||||||||| |||||||||||||||| || || |||||||||    
T  10350569 tgcataaattatgtaatgtccctgtcaattaagctaagcttacggg 10350524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 498 - 574
Target Start/End: Complemental strand, 26583170 - 26583094
Alignment:
Q  498 ggtgtccggagttcaaatctcgacctctgcata-aattatgcaatgtccctgtcaattgagttatgcttacggggaca 574  Q
    |||||||| ||||| || | ||||| ||||||| ||| ||||| |||||||||||||||||||||| | |||||||||    
T  26583170 ggtgtccgtagttcgaaccccgacccctgcatataataatgca-tgtccctgtcaattgagttatgatcacggggaca 26583094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 471 - 547
Target Start/End: Original strand, 30779537 - 30779614
Alignment:
Q  471 ctcacacatttaaat-gtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccct 547  Q
    |||||||| |||||| ||||||||||||||||||| | |||| || | ||||| ||||||| | |||||||| |||||    
T  30779537 ctcacacaattaaattgtggagaagtggggtgtccagggttcgaaccccgacccctgcatataatatgcaatatccct 30779614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 468 - 572
Target Start/End: Original strand, 32256521 - 32256626
Alignment:
Q  468 gagctcacaca-tttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagttatgctta 566  Q
    ||||||||||| ||||| |||||||||||||||||||||| |||| || | || || ||||||| |  ||||||| |||||  ||| |||| || ||| |    
T  32256521 gagctcacacaatttaattgtggagaagtggggtgtccggggttcgaaccccggcccctgcatataacatgcaatatccctaccaactgagctaagctca 32256620  T
Q  567 cgggga 572  Q
    ||||||    
T  32256621 cgggga 32256626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 478 - 547
Target Start/End: Original strand, 42108160 - 42108229
Alignment:
Q  478 atttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccct 547  Q
    |||||| ||||||||||||||| |||||| |||| || | || |||||||||| | |||||||| |||||    
T  42108160 atttaattgtggagaagtggggcgtccggggttcgaaacccggcctctgcatataatatgcaatatccct 42108229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 468 - 572
Target Start/End: Original strand, 52974020 - 52974125
Alignment:
Q  468 gagctcacaca-tttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagttatgctta 566  Q
    ||||||||||| ||||| ||||||||||||| |||||||| |||| || | || |  ||||||| | |||||||| |||||  ||| ||||||| ||| |    
T  52974020 gagctcacacaatttaattgtggagaagtggagtgtccggggttcgaaccccggctcctgcatataatatgcaatatccctaccaactgagttaagctca 52974119  T
Q  567 cgggga 572  Q
    ||||||    
T  52974120 cgggga 52974125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 468 - 511
Target Start/End: Complemental strand, 3894647 - 3894603
Alignment:
Q  468 gagctcacaca-tttaaatgtggagaagtggggtgtccggagttc 511  Q
    ||||||||||| ||||| ||||||||||||| |||||||||||||    
T  3894647 gagctcacacaatttaattgtggagaagtggagtgtccggagttc 3894603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 468 - 511
Target Start/End: Complemental strand, 7270058 - 7270014
Alignment:
Q  468 gagctcacaca-tttaaatgtggagaagtggggtgtccggagttc 511  Q
    ||||||||||| ||||| ||||||||||||| |||||||||||||    
T  7270058 gagctcacacaatttaattgtggagaagtggagtgtccggagttc 7270014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 468 - 511
Target Start/End: Original strand, 10482820 - 10482864
Alignment:
Q  468 gagctcacaca-tttaaatgtggagaagtggggtgtccggagttc 511  Q
    ||||||||||| ||||| ||||||||||||| |||||||||||||    
T  10482820 gagctcacacaatttaattgtggagaagtggagtgtccggagttc 10482864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 468 - 511
Target Start/End: Original strand, 11250538 - 11250582
Alignment:
Q  468 gagctcacaca-tttaaatgtggagaagtggggtgtccggagttc 511  Q
    ||||||||||| ||||| |||||||||||||||| ||||||||||    
T  11250538 gagctcacacaatttaattgtggagaagtggggtatccggagttc 11250582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 492 - 548
Target Start/End: Complemental strand, 17003880 - 17003824
Alignment:
Q  492 aagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctg 548  Q
    ||||||||||||||| ||||||| ||||    ||||||| |||||||||||||||||    
T  17003880 aagtggggtgtccggtgttcaaacctcggatcctgcatatattatgcaatgtccctg 17003824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 468 - 511
Target Start/End: Original strand, 22472281 - 22472325
Alignment:
Q  468 gagctcacaca-tttaaatgtggagaagtggggtgtccggagttc 511  Q
    ||||||||||| ||||| |||||||||||||||||||||| ||||    
T  22472281 gagctcacacaatttaattgtggagaagtggggtgtccggggttc 22472325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 468 - 547
Target Start/End: Original strand, 28689639 - 28689719
Alignment:
Q  468 gagctcacacatttaaat-gtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccct 547  Q
    ||||||||||| |||||| |||||||||||| |||||||| |||| || | ||||  ||||||| | |||||||| |||||    
T  28689639 gagctcacacaattaaattgtggagaagtggagtgtccggggttcgaaccccgactcctgcatataatatgcaatatccct 28689719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 468 - 547
Target Start/End: Complemental strand, 31587050 - 31586970
Alignment:
Q  468 gagctcacaca-tttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccct 547  Q
    ||||||||||| ||||| ||||||||||||||||||||||  ||| ||   ||||| ||||||| | |||||||| |||||    
T  31587050 gagctcacacaatttaattgtggagaagtggggtgtccgggattcgaactccgacccctgcatataatatgcaatatccct 31586970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 468 - 547
Target Start/End: Original strand, 34898734 - 34898814
Alignment:
Q  468 gagctcacaca-tttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccct 547  Q
    ||||||||||| ||||| ||||||||||||||||||| || |||| || |||  || ||||||| | |||||||| |||||    
T  34898734 gagctcacacaatttaattgtggagaagtggggtgtctggggttcgaacctcagcccctgcatataatatgcaatatccct 34898814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 467 - 506
Target Start/End: Complemental strand, 41710687 - 41710647
Alignment:
Q  467 ggagctcacacattt-aaatgtggagaagtggggtgtccgg 506  Q
    ||||||||||||||| ||||||||||||||| |||||||||    
T  41710687 ggagctcacacattttaaatgtggagaagtgaggtgtccgg 41710647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 491 - 547
Target Start/End: Original strand, 44798545 - 44798601
Alignment:
Q  491 gaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccct 547  Q
    |||||||||||| ||| ||||||||| ||| | || ||||||||||||||| |||||    
T  44798545 gaagtggggtgttcggggttcaaatcccgatccctccataaattatgcaatttccct 44798601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 467 - 506
Target Start/End: Complemental strand, 46767447 - 46767407
Alignment:
Q  467 ggagctcacacattt-aaatgtggagaagtggggtgtccgg 506  Q
    ||||||||||||||| ||||||||||||||||| |||||||    
T  46767447 ggagctcacacattttaaatgtggagaagtgggatgtccgg 46767407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 27 - 79
Target Start/End: Original strand, 46827111 - 46827163
Alignment:
Q  27 tttttaaaacattaccagcttactttaaccattgcaccagctgatatgggact 79  Q
    |||||| ||||||||||| ||||||||||  |||||||||| ||| |||||||    
T  46827111 tttttataacattaccagtttactttaactgttgcaccagccgatgtgggact 46827163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 482 - 543
Target Start/End: Complemental strand, 48443209 - 48443146
Alignment:
Q  482 aaatgtggagaagtggggtgtccggagttcaa--atctcgacctctgcataaattatgcaatgt 543  Q
    ||||||||||||||||||||| |||| ||| |  | | ||||| ||||||||||||||||||||    
T  48443209 aaatgtggagaagtggggtgttcggaattcgagaaccccgacccctgcataaattatgcaatgt 48443146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 468 - 511
Target Start/End: Original strand, 50675709 - 50675753
Alignment:
Q  468 gagctcacaca-tttaaatgtggagaagtggggtgtccggagttc 511  Q
    ||||||||||| ||||| |||||||||||||||||||| ||||||    
T  50675709 gagctcacacaatttaattgtggagaagtggggtgtccagagttc 50675753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 478 - 530
Target Start/End: Complemental strand, 53753713 - 53753661
Alignment:
Q  478 atttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcata 530  Q
    ||||||||||||||||||| ||| ||||| |||||||   |||||||||||||    
T  53753713 atttaaatgtggagaagtgaggtttccggggttcaaactccgacctctgcata 53753661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 78; Significance: 5e-36; HSPs: 88)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 449 - 574
Target Start/End: Original strand, 23132756 - 23132880
Alignment:
Q  449 tctagtagtctattggtcggagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctg 548  Q
    ||||||||||| ||||  ||||||||||||||||||| |||||||||||| |||||||||||| || | ||| | |||||||||||||||||||||||||    
T  23132756 tctagtagtctgttggctggagctcacacatttaaatatggagaagtggg-tgtccggagttcgaaccccgatccctgcataaattatgcaatgtccctg 23132854  T
Q  549 tcaattgagttatgcttacggggaca 574  Q
    ||||||||| ||||||||||||||||    
T  23132855 tcaattgagctatgcttacggggaca 23132880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 447 - 557
Target Start/End: Original strand, 38848067 - 38848178
Alignment:
Q  447 ggtctagtagtctattggtcggagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaa-ttatgcaatgtcc 545  Q
    |||||||||||||| ||||  ||||||||||||||||||||||||||||||||||||||| |||| || | ||||| ||||||||| ||||||||| |||    
T  38848067 ggtctagtagtctagtggttagagctcacacatttaaatgtggagaagtggggtgtccggggttcgaaccccgacccctgcataaatttatgcaatatcc 38848166  T
Q  546 ctgtcaattgag 557  Q
    ||| ||||||||    
T  38848167 ctgccaattgag 38848178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 447 - 569
Target Start/End: Original strand, 11294785 - 11294907
Alignment:
Q  447 ggtctagtagtctattggtcggagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccc 546  Q
    |||||||||| ||| |||   ||||||| ||||||||||||||||||||||||||||||| |||| || | || || |||||||||||||||||||||||    
T  11294785 ggtctagtagcctagtggctagagctcaaacatttaaatgtggagaagtggggtgtccggggttcgaaccccggcccctgcataaattatgcaatgtccc 11294884  T
Q  547 tgtcaattgagttatgcttacgg 569  Q
    || ||||||||||| ||| ||||    
T  11294885 tgccaattgagttaagctcacgg 11294907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 448 - 557
Target Start/End: Complemental strand, 29406479 - 29406370
Alignment:
Q  448 gtctagtagtctattggtcggagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccct 547  Q
    ||||||| | ||| |||| |||||||||||| ||||||||||||||||||| |||||||||||| || | ||||| ||||||||||||||||||||||||    
T  29406479 gtctagttgcctagtggttggagctcacacaattaaatgtggagaagtgggttgtccggagttcgaaccccgacccctgcataaattatgcaatgtccct 29406380  T
Q  548 gtcaattgag 557  Q
      ||||||||    
T  29406379 accaattgag 29406370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 468 - 575
Target Start/End: Complemental strand, 2629681 - 2629574
Alignment:
Q  468 gagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagttatgcttac 567  Q
    ||||||||||| ||||||||||||||||||||||| ||| |||| || | ||||| ||||||||||||||||||||||||| |||||||| || |||| |    
T  2629681 gagctcacacaattaaatgtggagaagtggggtgttcggggttcgaaccccgacccctgcataaattatgcaatgtccctgccaattgagctaagctttc 2629582  T
Q  568 ggggacag 575  Q
    | ||||||    
T  2629581 gaggacag 2629574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 468 - 571
Target Start/End: Complemental strand, 51890899 - 51890796
Alignment:
Q  468 gagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagttatgcttac 567  Q
    ||||||||||| ||||||||||||||||||||||||||| |||| || | || || ||||||||||||||||||||||||| ||| |||| || ||| ||    
T  51890899 gagctcacacaattaaatgtggagaagtggggtgtccggggttcgaaccccggcccctgcataaattatgcaatgtccctgccaactgagctaagctcac 51890800  T
Q  568 gggg 571  Q
    ||||    
T  51890799 gggg 51890796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 480 - 576
Target Start/End: Original strand, 42044026 - 42044122
Alignment:
Q  480 ttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagttatgcttacggggacaga 576  Q
    ||||||||||||||||||||||||||| ||||||| |||| || ||||||||||||||||||||| ||| ||| |||| || ||| |||| ||||||    
T  42044026 ttaaatgtggagaagtggggtgtccggggttcaaacctcggcccctgcataaattatgcaatgtctctgccaactgagctaagctcacggagacaga 42044122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 447 - 557
Target Start/End: Complemental strand, 3785034 - 3784925
Alignment:
Q  447 ggtctagtagtctattggtcggagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccc 546  Q
    |||||||||||||| |||  |||||||||||||||||||||||||||||| ||||| ||| |||| || |  |||| |||||||||||||||||| ||||    
T  3785034 ggtctagtagtctagtggctggagctcacacatttaaatgtggagaagtgtggtgttcggggttcgaaccctgacc-ctgcataaattatgcaatatccc 3784936  T
Q  547 tgtcaattgag 557  Q
    |  ||||||||    
T  3784935 taccaattgag 3784925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 447 - 557
Target Start/End: Complemental strand, 40486564 - 40486454
Alignment:
Q  447 ggtctagtagtctattggtcggagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccc 546  Q
    |||||||||| ||| |||   ||||||||||||||||||||| |||||||| |||||||| |||| || | || || |||||||||||||||||| ||||    
T  40486564 ggtctagtagcctagtggctagagctcacacatttaaatgtgaagaagtggagtgtccggggttcgaaccccggcccctgcataaattatgcaatatccc 40486465  T
Q  547 tgtcaattgag 557  Q
    || ||||||||    
T  40486464 tgccaattgag 40486454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 468 - 576
Target Start/End: Original strand, 23924840 - 23924948
Alignment:
Q  468 gagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagttatgcttac 567  Q
    |||||||||||  ||||||||||||||||  |||||||| |||| || | || || ||||||||||||||||||||||||  ||||||||||| | | ||    
T  23924840 gagctcacacaaataaatgtggagaagtgaagtgtccggggttcgaaccccggcccctgcataaattatgcaatgtccctaccaattgagttaagttcac 23924939  T
Q  568 ggggacaga 576  Q
    |||||||||    
T  23924940 ggggacaga 23924948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 449 - 557
Target Start/End: Complemental strand, 42664102 - 42663994
Alignment:
Q  449 tctagtagtctattggtcggagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctg 548  Q
    |||||||||||| |||   ||||||||||| ||||||||||||||||||||||||| |  ||| || | | |||||||| ||||||||||||||||| |     
T  42664102 tctagtagtctagtggctagagctcacacaattaaatgtggagaagtggggtgtccaggattcgaaccccaacctctgcgtaaattatgcaatgtccata 42664003  T
Q  549 tcaattgag 557  Q
    |||||||||    
T  42664002 tcaattgag 42663994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 468 - 544
Target Start/End: Complemental strand, 49264628 - 49264552
Alignment:
Q  468 gagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtc 544  Q
    ||||||||||| ||||||||||||||||||||||||||| |||| || |||| || |||||||| ||||||||||||    
T  49264628 gagctcacacaattaaatgtggagaagtggggtgtccggggttcgaacctcggcccctgcataagttatgcaatgtc 49264552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 449 - 544
Target Start/End: Original strand, 9764972 - 9765067
Alignment:
Q  449 tctagtagtctattggtcggagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtc 544  Q
    ||||||||| || | || ||||||||||||||||||||||||||||| |||||||||| |||| ||||    || |||||||||||||||||||||    
T  9764972 tctagtagtatagtagttggagctcacacatttaaatgtggagaagtagggtgtccggggttcgaatcataccccctgcataaattatgcaatgtc 9765067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 469 - 544
Target Start/End: Original strand, 18048603 - 18048678
Alignment:
Q  469 agctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtc 544  Q
    ||||||| ||||||||| ||||||||||| ||||||||||||| || |||| ||||||||||||||| ||||||||    
T  18048603 agctcacgcatttaaatatggagaagtggagtgtccggagttcgaacctcgccctctgcataaattaagcaatgtc 18048678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 447 - 570
Target Start/End: Complemental strand, 31852472 - 31852349
Alignment:
Q  447 ggtctagtagtctattggtcggagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccc 546  Q
    |||||||||| ||| |||   ||||||||||| |||||| |||||||||||||||||||| |||| || |||| ||  |||||||||||| |||||||||    
T  31852472 ggtctagtagcctagtggctagagctcacacaattaaatatggagaagtggggtgtccggggttcgaacctcggcccttgcataaattatacaatgtccc 31852373  T
Q  547 tgtcaattgagttatgcttacggg 570  Q
    || ||| |||| || ||| |||||    
T  31852372 tgccaactgagctaagctcacggg 31852349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 462 - 573
Target Start/End: Complemental strand, 55056024 - 55055913
Alignment:
Q  462 tggtcggagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagttat 561  Q
    |||| |||||||||||| |||||||||||||||||| |||||||| |||| || |||| || ||||||||| |||||| |||||||  ||| |||| ||     
T  55056024 tggttggagctcacacaattaaatgtggagaagtggcgtgtccggggttcgaacctcggcccctgcataaaatatgcattgtccctaccaactgagctaa 55055925  T
Q  562 gcttacggggac 573  Q
    ||| ||||||||    
T  55055924 gctcacggggac 55055913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 468 - 547
Target Start/End: Complemental strand, 42002408 - 42002329
Alignment:
Q  468 gagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccct 547  Q
    ||||||||||| |||||||||||||||||||||||| |  ||||||| | || || || |||||||||||||||||||||    
T  42002408 gagctcacacaattaaatgtggagaagtggggtgtctgaggttcaaaccacggcccctacataaattatgcaatgtccct 42002329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 468 - 572
Target Start/End: Original strand, 3036022 - 3036127
Alignment:
Q  468 gagctcacaca-tttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagttatgctta 566  Q
    ||||||||||| ||||| |||||||||||||||||||||| |||| || |||| || ||||||| | |||||||| |||||  ||| ||||||| ||| |    
T  3036022 gagctcacacaatttaattgtggagaagtggggtgtccggggttcgaacctcggcccctgcatataatatgcaatatccctaccaactgagttaagctca 3036121  T
Q  567 cgggga 572  Q
    ||||||    
T  3036122 cgggga 3036127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 472 - 545
Target Start/End: Complemental strand, 12625927 - 12625854
Alignment:
Q  472 tcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtcc 545  Q
    ||||||| ||||||||||||||||||||||||||| |||| ||   ||||| ||||||||||||||||| ||||    
T  12625927 tcacacaattaaatgtggagaagtggggtgtccggtgttcgaactccgacccctgcataaattatgcaacgtcc 12625854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 468 - 573
Target Start/End: Complemental strand, 32293210 - 32293105
Alignment:
Q  468 gagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagttatgcttac 567  Q
    ||||||||| | ||||||||||||||||||  ||||| | |||| || | ||||| |||||||||||||||||||||| | |||| |||| || ||| ||    
T  32293210 gagctcacataattaaatgtggagaagtggaatgtccagggttctaaccccgacccctgcataaattatgcaatgtccttatcaactgagctaagctcac 32293111  T
Q  568 ggggac 573  Q
    ||||||    
T  32293110 ggggac 32293105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 468 - 541
Target Start/End: Complemental strand, 51777946 - 51777873
Alignment:
Q  468 gagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaat 541  Q
    ||||||||||||||||||||||||||||||| |||||||||||| || | ||| | ||||||| | ||||||||    
T  51777946 gagctcacacatttaaatgtggagaagtgggatgtccggagttcgaaccccgatccctgcatataatatgcaat 51777873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 469 - 573
Target Start/End: Complemental strand, 25224573 - 25224469
Alignment:
Q  469 agctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagttatgcttacg 568  Q
    ||||||||||| ||||| || ||||||||||||||||  |||| ||   ||||| ||||||||||||||||||||||||  || |||||||| |||  ||    
T  25224573 agctcacacatataaatatgaagaagtggggtgtccgaggttcgaactccgacccctgcataaattatgcaatgtccctaccagttgagttaagctctcg 25224474  T
Q  569 gggac 573  Q
    |||||    
T  25224473 gggac 25224469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 467 - 547
Target Start/End: Complemental strand, 52557042 - 52556962
Alignment:
Q  467 ggagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccct 547  Q
    |||||||||||||||||| ||| |||||||||||||  || |||| || | ||||||||| |||||||||| |||||||||    
T  52557042 ggagctcacacatttaaacgtgtagaagtggggtgttaggggttcgaaccccgacctctgtataaattatgtaatgtccct 52556962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 468 - 570
Target Start/End: Complemental strand, 624583 - 624480
Alignment:
Q  468 gagctcacacattt-aaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagttatgctta 566  Q
    |||||||||||||| |||||||||||||||||||||| || |||| || | |  || |||||||||||||||||||||| |  ||| ||||||| ||| |    
T  624583 gagctcacacattttaaatgtggagaagtggggtgtcaggggttcgaacccctgcccctgcataaattatgcaatgtccttaccaactgagttaagctca 624484  T
Q  567 cggg 570  Q
    ||||    
T  624483 cggg 624480  T

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Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 472 - 547
Target Start/End: Original strand, 45139853 - 45139928
Alignment:
Q  472 tcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccct 547  Q
    ||||||| ||||||||||||||||| ||||||||| |||| || | || || ||||||||||||| ||||||||||    
T  45139853 tcacacaattaaatgtggagaagtgaggtgtccggggttcgaaccccggcccctgcataaattatacaatgtccct 45139928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 475 - 577
Target Start/End: Complemental strand, 24704223 - 24704122
Alignment:
Q  475 cacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagttatgcttacggggaca 574  Q
    |||| ||||||||||||||||| | ||||| | |||| ||   ||||| |||||||||||||||||||| |||  ||||||||||| | |||||||||||    
T  24704223 cacaattaaatgtggagaagtgag-tgtccagggttcgaactccgacccctgcataaattatgcaatgttcctaccaattgagttaagtttacggggaca 24704125  T
Q  575 gaa 577  Q
    |||    
T  24704124 gaa 24704122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 448 - 541
Target Start/End: Original strand, 29256936 - 29257029
Alignment:
Q  448 gtctagtagtctattggtcggagctcacacatttaaatgtggagaagtggggtgtccggagttc-aaatctcgacctctgcataaattatgcaat 541  Q
    ||||||||||||| ||  ||||||||||||| ||||||||||||||| |||||||| || |||| || ||| | || ||||||||||||||||||    
T  29256936 gtctagtagtctagtgaccggagctcacacaattaaatgtggagaagcggggtgtctggggttcgaactct-ggccgctgcataaattatgcaat 29257029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 469 - 569
Target Start/End: Original strand, 13578433 - 13578534
Alignment:
Q  469 agctcacaca-tttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagttatgcttac 567  Q
    |||||||||| ||||| |||||||||||||||||||||| |||| || | ||||| ||||||| | |||||||| |||||  ||| ||||||| ||| ||    
T  13578433 agctcacacaatttaattgtggagaagtggggtgtccggggttcgaaccccgacccctgcatataatatgcaatatccctaccaactgagttaagctcac 13578532  T
Q  568 gg 569  Q
    ||    
T  13578533 gg 13578534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 468 - 557
Target Start/End: Complemental strand, 19654948 - 19654859
Alignment:
Q  468 gagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgag 557  Q
    ||||||||||| ||||||||| ||||||| ||||||   | ||| || |||  || ||||||||||||||||||||||||||||| ||||    
T  19654948 gagctcacacaattaaatgtgaagaagtgaggtgtcaaaaattctaacctcagcccctgcataaattatgcaatgtccctgtcaaatgag 19654859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 469 - 573
Target Start/End: Original strand, 33933707 - 33933812
Alignment:
Q  469 agctcacacat-ttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagttatgcttac 567  Q
    ||||||||||| ||||||||||||||||||||||||| | | || || | || || ||||||| ||||||||||||||||  ||| |||| || ||| ||    
T  33933707 agctcacacatattaaatgtggagaagtggggtgtccaggggtcgaaccccggcccctgcatatattatgcaatgtccctaccaactgagctaagctcac 33933806  T
Q  568 ggggac 573  Q
    ||||||    
T  33933807 ggggac 33933812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 469 - 514
Target Start/End: Original strand, 53921476 - 53921521
Alignment:
Q  469 agctcacacatttaaatgtggagaagtggggtgtccggagttcaaa 514  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||    
T  53921476 agctcacacagttaaatgtggagaagtggggtgtccggggttcaaa 53921521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 468 - 552
Target Start/End: Original strand, 28465742 - 28465826
Alignment:
Q  468 gagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaa 552  Q
    ||||||||||| |||| |||||||||||| |||||| ||||||| || | ||||| ||  || ||||||||||||||||| ||||    
T  28465742 gagctcacacaattaattgtggagaagtgaggtgtctggagttcgaaccccgacccctagattaattatgcaatgtccctatcaa 28465826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 468 - 544
Target Start/End: Original strand, 43627229 - 43627305
Alignment:
Q  468 gagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtc 544  Q
    ||||||||||| |||||| ||||||||||| |||||| | |||  || | ||||| |||||||||||||||||||||    
T  43627229 gagctcacacaattaaatatggagaagtggagtgtccagggtttgaaccccgacccctgcataaattatgcaatgtc 43627305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 472 - 547
Target Start/End: Original strand, 32287512 - 32287587
Alignment:
Q  472 tcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccct 547  Q
    ||||||| |||||| ||||||||||||||||  || |||||||   | ||| ||||||||||||||||||||||||    
T  32287512 tcacacaattaaatatggagaagtggggtgtttggggttcaaactccaacccctgcataaattatgcaatgtccct 32287587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 468 - 547
Target Start/End: Original strand, 40809149 - 40809228
Alignment:
Q  468 gagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccct 547  Q
    ||||||||| | |||| |||||||||||||| ||||||| |||||||   ||| ||||||||||||||| |||| |||||    
T  40809149 gagctcacataattaattgtggagaagtgggatgtccggggttcaaactccgatctctgcataaattatacaatatccct 40809228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 468 - 506
Target Start/End: Complemental strand, 2688198 - 2688160
Alignment:
Q  468 gagctcacacatttaaatgtggagaagtggggtgtccgg 506  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  2688198 gagctcacacatttaaatgtggagaaatggggtgtccgg 2688160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 470 - 547
Target Start/End: Original strand, 22788643 - 22788721
Alignment:
Q  470 gctcacacatttaaat-gtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccct 547  Q
    ||||||||| |||||| |||||||||||||||||||||  |||||| |||| || ||||||| | |||||||| |||||    
T  22788643 gctcacacaattaaattgtggagaagtggggtgtccgggattcaaacctcggcccctgcatataatatgcaatatccct 22788721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 524 - 574
Target Start/End: Complemental strand, 26250693 - 26250643
Alignment:
Q  524 ctgcataaattatgcaatgtccctgtcaattgagttatgcttacggggaca 574  Q
    ||||||||||||||||||||||||  ||| ||||||||||| |||||||||    
T  26250693 ctgcataaattatgcaatgtccctaccaactgagttatgctcacggggaca 26250643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 492 - 573
Target Start/End: Original strand, 42411474 - 42411556
Alignment:
Q  492 aagtggggtgtccggagttcaaatctcgacctctgcata-aattatgcaatgtccctgtcaattgagttatgcttacggggac 573  Q
    ||||||||||||||| |||| || | ||||| ||||||| ||||||||| |||||||| ||| |||| |||||| ||||||||    
T  42411474 aagtggggtgtccggggttcgaaccccgacccctgcatataattatgcattgtccctgccaactgagctatgctcacggggac 42411556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 468 - 541
Target Start/End: Complemental strand, 47929348 - 47929274
Alignment:
Q  468 gagctcacacattt-aaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaat 541  Q
    |||||||||||||| ||||||||||||||||||| ||||  |||| || ||||||| ||||||| | ||||||||    
T  47929348 gagctcacacattttaaatgtggagaagtggggtttccgaggttcgaacctcgacccctgcatataatatgcaat 47929274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 468 - 574
Target Start/End: Complemental strand, 52015592 - 52015487
Alignment:
Q  468 gagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagttatgcttac 567  Q
    |||||| |||| ||||| |||||| ||||| ||||||||| ||| || |||  ||  |||||||||||||||||||||||| ||| |||| || ||| ||    
T  52015592 gagctcgcacaattaaacgtggaggagtggagtgtccgga-ttcgaacctcagcccttgcataaattatgcaatgtccctgccaactgagctaagctcac 52015494  T
Q  568 ggggaca 574  Q
    |||||||    
T  52015493 ggggaca 52015487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 468 - 572
Target Start/End: Original strand, 1457985 - 1458090
Alignment:
Q  468 gagctcacaca-tttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagttatgctta 566  Q
    ||||||||||| ||||| ||||||||||||| |||||||| |||| || | || |  ||||||| | |||||||| ||||| |||| |||| || |||||    
T  1457985 gagctcacacaatttaattgtggagaagtggagtgtccggggttcgaaccccggctcctgcatataatatgcaatatccctatcaactgagctaagctta 1458084  T
Q  567 cgggga 572  Q
    ||||||    
T  1458085 cgggga 1458090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 468 - 572
Target Start/End: Original strand, 11375856 - 11375961
Alignment:
Q  468 gagctcacacatttaaat-gtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagttatgctta 566  Q
    |||||||||||||| ||| ||||||||||| ||||||||| |||| || | || || ||||||| | |||||||| ||||| |||| |||| || ||| |    
T  11375856 gagctcacacattttaattgtggagaagtgaggtgtccggggttcgaaccccggcccctgcatataatatgcaatatccctatcaactgagctaagctca 11375955  T
Q  567 cgggga 572  Q
    ||||||    
T  11375956 cgggga 11375961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 470 - 543
Target Start/End: Complemental strand, 13089009 - 13088936
Alignment:
Q  470 gctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgt 543  Q
    ||||||||| || |||||||| ||||||||||||||   ||| || | ||||| ||||||||||||||||||||    
T  13089009 gctcacacaatttaatgtggaaaagtggggtgtccgagattcgaaccccgacccctgcataaattatgcaatgt 13088936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 447 - 547
Target Start/End: Complemental strand, 30057346 - 30057245
Alignment:
Q  447 ggtctagtagtctattggtcggagctcacaca-tttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtcc 545  Q
    |||| ||||| ||| ||||  ||||||||||| ||||| |||||||||||||||||||||| |||  || | ||||| ||||||| | |||||||| |||    
T  30057346 ggtcaagtagcctagtggttagagctcacacaatttaattgtggagaagtggggtgtccggggtttgaaccccgacccctgcatataatatgcaatatcc 30057247  T
Q  546 ct 547  Q
    ||    
T  30057246 ct 30057245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 478 - 547
Target Start/End: Complemental strand, 34353871 - 34353802
Alignment:
Q  478 atttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccct 547  Q
    |||||| |||||||||||||||||||||| |||| || |  |||||||||||| | |||||||| |||||    
T  34353871 atttaattgtggagaagtggggtgtccggggttcgaaccctgacctctgcatataatatgcaatatccct 34353802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 467 - 511
Target Start/End: Original strand, 36099149 - 36099194
Alignment:
Q  467 ggagctcacacattt-aaatgtggagaagtggggtgtccggagttc 511  Q
    ||||||||||||||| ||||||||||||||||||||||||| ||||    
T  36099149 ggagctcacacattttaaatgtggagaagtggggtgtccggggttc 36099194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 478 - 547
Target Start/End: Original strand, 42134435 - 42134504
Alignment:
Q  478 atttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccct 547  Q
    |||||| ||||||||||||||||||||||||||| || | |||||  |||||| | |||||||| |||||    
T  42134435 atttaattgtggagaagtggggtgtccggagttcgaaccccgacccttgcatataatatgcaatatccct 42134504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 469 - 541
Target Start/End: Original strand, 21863854 - 21863926
Alignment:
Q  469 agctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaat 541  Q
    |||||||||| ||||| ||||||||||||||||||||  |||| || | || | | |||||||||||||||||    
T  21863854 agctcacacaattaaaagtggagaagtggggtgtccgatgttcgaaccacggcttttgcataaattatgcaat 21863926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 469 - 541
Target Start/End: Original strand, 21919715 - 21919787
Alignment:
Q  469 agctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaat 541  Q
    |||||||||| ||||| ||||||||||||||||||||  |||| || | || | | |||||||||||||||||    
T  21919715 agctcacacaattaaaagtggagaagtggggtgtccgatgttcgaaccacggcttttgcataaattatgcaat 21919787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 469 - 572
Target Start/End: Complemental strand, 21935579 - 21935475
Alignment:
Q  469 agctcacaca-tttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagttatgcttac 567  Q
    |||||||||| ||||| |||||||||||||||||||||| |||| || | || || ||||||| | |||||||| |||||  ||| |||| || |||| |    
T  21935579 agctcacacaatttaattgtggagaagtggggtgtccggggttcgaaccccggcccctgcatataatatgcaatatccctaccaactgagctaagcttgc 21935480  T
Q  568 gggga 572  Q
    |||||    
T  21935479 gggga 21935475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 468 - 544
Target Start/End: Original strand, 23555977 - 23556053
Alignment:
Q  468 gagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtc 544  Q
    ||||||||| | ||||||||||||||||||||| | ||  |||| ||||||   | |||||||||||||||||||||    
T  23555977 gagctcacataattaaatgtggagaagtggggtattcgaggttcgaatctcagtccctgcataaattatgcaatgtc 23556053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 468 - 560
Target Start/End: Complemental strand, 43905812 - 43905720
Alignment:
Q  468 gagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagtta 560  Q
    ||||||||||| ||||| ||||||||||||||||||||| |||| || | ||| | ||||||| |  ||||||| |||||  ||| |||||||    
T  43905812 gagctcacacaattaaacgtggagaagtggggtgtccggggttcgaaccccgatccctgcatataacatgcaatatccctaccaactgagtta 43905720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 468 - 516
Target Start/End: Complemental strand, 44040461 - 44040413
Alignment:
Q  468 gagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatc 516  Q
    ||||||||||| ||| || |||||||||||||||||||| |||||||||    
T  44040461 gagctcacacaattatatatggagaagtggggtgtccggggttcaaatc 44040413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 447 - 511
Target Start/End: Original strand, 46791155 - 46791219
Alignment:
Q  447 ggtctagtagtctattggtcggagctcacacatttaaatgtggagaagtggggtgtccggagttc 511  Q
    |||||||||| ||| |||  | |||||||| | ||||||||| ||||||||||||||||||||||    
T  46791155 ggtctagtagcctagtggctgaagctcacagaattaaatgtgaagaagtggggtgtccggagttc 46791219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 468 - 547
Target Start/End: Complemental strand, 54534929 - 54534849
Alignment:
Q  468 gagctcacacat-ttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccct 547  Q
    |||||||||||| ||||||||||||||||||||||||||  |||| || | ||| || |||||| | |||||||| |||||    
T  54534929 gagctcacacatattaaatgtggagaagtggggtgtccgtggttcgaaccccgaactttgcatataatatgcaatatccct 54534849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 471 - 541
Target Start/End: Complemental strand, 2275146 - 2275075
Alignment:
Q  471 ctcacacatttaa-atgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaat 541  Q
    ||||||||| ||| ||||||||||||||||||||||| |||||||  |||| | ||||||| | ||||||||    
T  2275146 ctcacacatataatatgtggagaagtggggtgtccggggttcaaacatcgatccctgcatataatatgcaat 2275075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 468 - 547
Target Start/End: Original strand, 27308673 - 27308752
Alignment:
Q  468 gagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccct 547  Q
    |||||||||||||||||| |||| ||| | |||||||| ||||| || | ||||| ||||||| |||||||  |||||||    
T  27308673 gagctcacacatttaaatatggataagggaggtgtccgaagttcgaaccccgacccctgcatatattatgcgttgtccct 27308752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 452 - 499
Target Start/End: Complemental strand, 28815730 - 28815683
Alignment:
Q  452 agtagtctattggtcggagctcacacatttaaatgtggagaagtgggg 499  Q
    ||||||||| ||||  |||||||||||||| |||||||||||||||||    
T  28815730 agtagtctagtggttagagctcacacattttaatgtggagaagtgggg 28815683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 492 - 574
Target Start/End: Complemental strand, 36045905 - 36045823
Alignment:
Q  492 aagtggggtgtccggagttcaaatctcgacctctgcata-aattatgcaatgtccctgtcaattgagttatgcttacggggaca 574  Q
    ||||| |||||||||||||| |||||| ||| ||||||| ||  ||||| ||||||||||||||||| |||||| || ||||||    
T  36045905 aagtgaggtgtccggagttcgaatctcaacccctgcatataacaatgca-tgtccctgtcaattgagctatgctcactgggaca 36045823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 479 - 558
Target Start/End: Complemental strand, 39311757 - 39311678
Alignment:
Q  479 tttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagt 558  Q
    |||||||||| ||||||||   || ||||||| ||| ||| ||| ||||||| |||||||||||||| | ||||||||||    
T  39311757 tttaaatgtgtagaagtggaaagttcggagtttaaacctcaacccctgcatatattatgcaatgtccttatcaattgagt 39311678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 469 - 511
Target Start/End: Complemental strand, 42395329 - 42395286
Alignment:
Q  469 agctcacaca-tttaaatgtggagaagtggggtgtccggagttc 511  Q
    |||||||||| ||||| |||||||||||||||||||||||||||    
T  42395329 agctcacacaatttaattgtggagaagtggggtgtccggagttc 42395286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 468 - 514
Target Start/End: Complemental strand, 46903433 - 46903386
Alignment:
Q  468 gagctcacacatt-taaatgtggagaagtggggtgtccggagttcaaa 514  Q
    ||||||||||||| |||||| ||||||||||||||||||| |||||||    
T  46903433 gagctcacacattataaatgcggagaagtggggtgtccggggttcaaa 46903386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 468 - 570
Target Start/End: Original strand, 48615439 - 48615542
Alignment:
Q  468 gagctcacaca-tttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagttatgctta 566  Q
    ||||||||||| ||||| ||||||||||||| || ||||| |||| || | || | |||||||| | |||||||| |||||  ||| ||||||||||| |    
T  48615439 gagctcacacaatttaattgtggagaagtggagtatccggggttcgaaccccggcttctgcatataatatgcaatatccctaccaactgagttatgctca 48615538  T
Q  567 cggg 570  Q
    ||||    
T  48615539 cggg 48615542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 447 - 572
Target Start/End: Complemental strand, 8965218 - 8965092
Alignment:
Q  447 ggtctagtagtctattggtcggagctcacaca-tttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtcc 545  Q
    |||| ||||| ||| ||||  ||||||||||| ||||| ||| |||||||||||||||||| |||| || | || || ||||||| | |||||||| |||    
T  8965218 ggtcaagtagcctagtggttagagctcacacaatttaattgtagagaagtggggtgtccggggttcgaaccccggcccctgcatataatatgcaatatcc 8965119  T
Q  546 ctgtcaattgagttatgcttacgggga 572  Q
    ||  ||| |||| || ||| |||||||    
T  8965118 ctaccaactgagctaagctcacgggga 8965092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 525 - 575
Target Start/End: Complemental strand, 16975117 - 16975067
Alignment:
Q  525 tgcataaattatgcaatgtccctgtcaattgagttatgcttacggggacag 575  Q
    |||||||||||||||||||||||  |||||||| || ||||||| ||||||    
T  16975117 tgcataaattatgcaatgtccctaccaattgagctaagcttacgaggacag 16975067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 467 - 505
Target Start/End: Complemental strand, 30263863 - 30263825
Alignment:
Q  467 ggagctcacacatttaaatgtggagaagtggggtgtccg 505  Q
    |||| |||||||||||||||||||||||| |||||||||    
T  30263863 ggaggtcacacatttaaatgtggagaagttgggtgtccg 30263825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 467 - 505
Target Start/End: Original strand, 30288324 - 30288362
Alignment:
Q  467 ggagctcacacatttaaatgtggagaagtggggtgtccg 505  Q
    |||| |||||||||||||||||||||||| |||||||||    
T  30288324 ggaggtcacacatttaaatgtggagaagttgggtgtccg 30288362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 468 - 572
Target Start/End: Complemental strand, 10402544 - 10402439
Alignment:
Q  468 gagctcacaca-tttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagttatgctta 566  Q
    ||||||||||| ||||| |||||||||||| ||||||||| |||| ||   ||||| ||||||| | |||||||| || ||  ||| ||||||| ||| |    
T  10402544 gagctcacacaatttaattgtggagaagtgaggtgtccggggttcgaactccgacccctgcatataatatgcaatatctctaccaactgagttaagctca 10402445  T
Q  567 cgggga 572  Q
    ||||||    
T  10402444 cgggga 10402439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 492 - 545
Target Start/End: Complemental strand, 29584721 - 29584668
Alignment:
Q  492 aagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtcc 545  Q
    ||||| ||||||||| |||| || |||| || ||||||||||||||||||||||    
T  29584721 aagtgaggtgtccggggttcgaacctcggcccctgcataaattatgcaatgtcc 29584668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 467 - 511
Target Start/End: Complemental strand, 30305903 - 30305858
Alignment:
Q  467 ggagctcacacattt-aaatgtggagaagtggggtgtccggagttc 511  Q
    ||||||||||||||| ||||||||||||||| ||||||||| ||||    
T  30305903 ggagctcacacattttaaatgtggagaagtgaggtgtccggggttc 30305858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 468 - 541
Target Start/End: Original strand, 44568187 - 44568260
Alignment:
Q  468 gagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaat 541  Q
    ||||||||||| |||||| |||||||||| ||||||  |||||| || | ||||| ||||||| | ||||||||    
T  44568187 gagctcacacaattaaatatggagaagtgaggtgtctcgagttcgaaccccgacccctgcatataatatgcaat 44568260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 468 - 572
Target Start/End: Complemental strand, 49901585 - 49901480
Alignment:
Q  468 gagctcacaca-tttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagttatgctta 566  Q
    ||||||||||| ||||| |||||||||| ||||||||||| |||| || | || || ||||||| | |||||||| |||||  ||| |||| || ||| |    
T  49901585 gagctcacacaatttaattgtggagaagcggggtgtccggggttcgaaccccggcccctgcatataatatgcaatatccctaccaactgagctaagctca 49901486  T
Q  567 cgggga 572  Q
    ||||||    
T  49901485 cgggga 49901480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 468 - 511
Target Start/End: Complemental strand, 2222642 - 2222598
Alignment:
Q  468 gagctcacaca-tttaaatgtggagaagtggggtgtccggagttc 511  Q
    ||||||||||| ||||| |||||||||||||||||||||| ||||    
T  2222642 gagctcacacaatttaattgtggagaagtggggtgtccggggttc 2222598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 454 - 501
Target Start/End: Original strand, 4513393 - 4513441
Alignment:
Q  454 tagtctattggtcggagctcacaca-tttaaatgtggagaagtggggtg 501  Q
    ||||||| ||||| ||||||||||| |||||||||||||||||| ||||    
T  4513393 tagtctagtggtcagagctcacacattttaaatgtggagaagtgaggtg 4513441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 468 - 547
Target Start/End: Original strand, 12504610 - 12504690
Alignment:
Q  468 gagctcacaca-tttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccct 547  Q
    ||||||||||| ||||| ||||||||||||| || ||||| |||| || ||||||  ||||||| | |||||||| |||||    
T  12504610 gagctcacacaatttaattgtggagaagtggagtatccggggttcgaacctcgactcctgcatataatatgcaatatccct 12504690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 475 - 511
Target Start/End: Complemental strand, 23695179 - 23695143
Alignment:
Q  475 cacatttaaatgtggagaagtggggtgtccggagttc 511  Q
    |||| ||||||||||||||||||||||||||| ||||    
T  23695179 cacaattaaatgtggagaagtggggtgtccggggttc 23695143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 500 - 560
Target Start/End: Complemental strand, 25780579 - 25780519
Alignment:
Q  500 tgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagtta 560  Q
    ||||||| |||| || | ||||| ||||||| |||||||||||||| || |||||||||||    
T  25780579 tgtccggcgttcgaaccacgacccctgcatatattatgcaatgtccttgccaattgagtta 25780519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 468 - 547
Target Start/End: Original strand, 27103068 - 27103148
Alignment:
Q  468 gagctcacaca-tttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccct 547  Q
    ||||||||||| ||||| ||||||||||||| ||||||||| ||| ||   |||||||| |||| | |||||||| |||||    
T  27103068 gagctcacacaatttaattgtggagaagtggagtgtccggaattcgaactccgacctctacatataatatgcaatatccct 27103148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 492 - 532
Target Start/End: Original strand, 35747502 - 35747542
Alignment:
Q  492 aagtggggtgtccggagttcaaatctcgacctctgcataaa 532  Q
    |||||||||||||||||||| || ||||||| |||||||||    
T  35747502 aagtggggtgtccggagttcgaacctcgacccctgcataaa 35747542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 475 - 547
Target Start/End: Original strand, 41897522 - 41897594
Alignment:
Q  475 cacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccct 547  Q
    |||| ||||||||||||||||||||||| | | |||| || |||| ||  |||||| |||||||||| |||||    
T  41897522 cacaattaaatgtggagaagtggggtgtacagggttcgaacctcggcccgtgcatatattatgcaatatccct 41897594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 468 - 504
Target Start/End: Complemental strand, 42081837 - 42081801
Alignment:
Q  468 gagctcacacatttaaatgtggagaagtggggtgtcc 504  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  42081837 gagctcacacaattaaatgtggagaagtggagtgtcc 42081801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 479 - 511
Target Start/End: Complemental strand, 46562734 - 46562702
Alignment:
Q  479 tttaaatgtggagaagtggggtgtccggagttc 511  Q
    ||||||| |||||||||||||||||||||||||    
T  46562734 tttaaatatggagaagtggggtgtccggagttc 46562702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 468 - 511
Target Start/End: Complemental strand, 49056878 - 49056834
Alignment:
Q  468 gagctcacaca-tttaaatgtggagaagtggggtgtccggagttc 511  Q
    ||||||||||| ||||| |||||||||||||||||||||| ||||    
T  49056878 gagctcacacaatttaattgtggagaagtggggtgtccggggttc 49056834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 469 - 541
Target Start/End: Complemental strand, 50512461 - 50512389
Alignment:
Q  469 agctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaat 541  Q
    |||||||||||||||||||||||||||  |||||| |  |||| || ||| ||| ||||||| | ||||||||    
T  50512461 agctcacacatttaaatgtggagaagtaaggtgtcagaggttcgaacctcaacccctgcatataatatgcaat 50512389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 470 - 569
Target Start/End: Original strand, 53572296 - 53572396
Alignment:
Q  470 gctcacacatttaaat-gtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagttatgcttacg 568  Q
    ||||||||| |||||| |||||||||||| |||||||| |||  |||| || |  ||||||| | |||||||| ||||| |||| ||||||| ||| |||    
T  53572296 gctcacacaattaaattgtggagaagtggagtgtccggggtttgaatcccggctcctgcatataatatgcaatatccctatcaactgagttaagctcacg 53572395  T
Q  569 g 569  Q
    |    
T  53572396 g 53572396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 479 - 547
Target Start/End: Original strand, 55260292 - 55260360
Alignment:
Q  479 tttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccct 547  Q
    ||||||||||||||||||| ||||| |  |||| || |||  || || |||||||||||||||||||||    
T  55260292 tttaaatgtggagaagtggagtgtcagaggttcgaacctctgcccctacataaattatgcaatgtccct 55260360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 479 - 547
Target Start/End: Original strand, 55521442 - 55521510
Alignment:
Q  479 tttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccct 547  Q
    |||||||||| |||||||| ||||  || |||| |||| ||||||||||||| | ||| ||||||||||    
T  55521442 tttaaatgtgaagaagtggagtgtttggggttcgaatcccgacctctgcatataatatacaatgtccct 55521510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 64; Significance: 1e-27; HSPs: 72)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 466 - 573
Target Start/End: Complemental strand, 22774144 - 22774037
Alignment:
Q  466 cggagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagttatgctt 565  Q
    ||||||||||||||||||||||||||||||||||||||||| |||  || | |  || |||||||||||||||||||||||||||||||||| || |||     
T  22774144 cggagctcacacatttaaatgtggagaagtggggtgtccggggtttgaacccctgcccctgcataaattatgcaatgtccctgtcaattgagctaagctc 22774045  T
Q  566 acggggac 573  Q
    ||||||||    
T  22774044 acggggac 22774037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 451 - 547
Target Start/End: Original strand, 40518840 - 40518936
Alignment:
Q  451 tagtagtctattggtcggagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccct 547  Q
    |||||||||| |||| |||||||||||| |||||||||||||||||||||||||||||||| |||| | ||| || |||| ||||||||||||||||    
T  40518840 tagtagtctaatggttggagctcacacaattaaatgtggagaagtggggtgtccggagttcgaatcccaacccctacatatattatgcaatgtccct 40518936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 468 - 560
Target Start/End: Complemental strand, 28059848 - 28059756
Alignment:
Q  468 gagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagtta 560  Q
    |||||||||||||||||||||||||| |||||||| | |||||| || | || || |||||||||||||||||||||||||| ||||||||||    
T  28059848 gagctcacacatttaaatgtggagaattggggtgttcagagttcgaaccccggcccctgcataaattatgcaatgtccctgttaattgagtta 28059756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 469 - 557
Target Start/End: Original strand, 41331048 - 41331136
Alignment:
Q  469 agctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgag 557  Q
    |||||||||| |||||||||||||||||||||||||||| ||| || | ||||| ||||||||||||||||||||||||| ||| ||||    
T  41331048 agctcacacaattaaatgtggagaagtggggtgtccggaattcgaaccccgacccctgcataaattatgcaatgtccctgccaactgag 41331136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 447 - 557
Target Start/End: Original strand, 45284766 - 45284876
Alignment:
Q  447 ggtctagtagtctattggtcggagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccc 546  Q
    |||||| ||||||| ||||  ||||||||||| |||||||| |||||||||||||||||| |||| || | ||||| ||||||||||||| |||||||||    
T  45284766 ggtctaatagtctagtggttagagctcacacaattaaatgttgagaagtggggtgtccggggttcgaaccccgacccctgcataaattattcaatgtccc 45284865  T
Q  547 tgtcaattgag 557  Q
    | |||| ||||    
T  45284866 tatcaactgag 45284876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 467 - 564
Target Start/End: Complemental strand, 27788372 - 27788275
Alignment:
Q  467 ggagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagttatgct 564  Q
    |||||||| |||||||||||||||||||||||||||| || |||| || | || || |||||||||||||||||| |||||| |||||||| ||||||    
T  27788372 ggagctcatacatttaaatgtggagaagtggggtgtctggggttcgaaccccggcccctgcataaattatgcaatatccctgccaattgagctatgct 27788275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 467 - 564
Target Start/End: Complemental strand, 27791528 - 27791431
Alignment:
Q  467 ggagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagttatgct 564  Q
    |||||||| |||||||||||||||||||||||||||| || |||| || | || || |||||||||||||||||| |||||| |||||||| ||||||    
T  27791528 ggagctcatacatttaaatgtggagaagtggggtgtctggggttcgaaccccggcccctgcataaattatgcaatatccctgccaattgagctatgct 27791431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 480 - 557
Target Start/End: Original strand, 37411717 - 37411794
Alignment:
Q  480 ttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgag 557  Q
    |||||||||||||||||||||||||||||||||||   ||||| ||||||||||||||||||||||||  ||||||||    
T  37411717 ttaaatgtggagaagtggggtgtccggagttcaaactccgacccctgcataaattatgcaatgtccctaccaattgag 37411794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 451 - 574
Target Start/End: Original strand, 12007746 - 12007868
Alignment:
Q  451 tagtagtctattggtcggagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtc 550  Q
    |||||||||| |||| |||||||||||| |||| |||||||||||| | ||||||| |||| || | |  || ||||||||||||| |||||||||| ||    
T  12007746 tagtagtctagtggttggagctcacacaattaattgtggagaagtgag-tgtccggggttcgaaccccagcccctgcataaattatacaatgtccctatc 12007844  T
Q  551 aattgagttatgcttacggggaca 574  Q
    ||||| | ||||||||||||||||    
T  12007845 aattgcgctatgcttacggggaca 12007868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 468 - 560
Target Start/End: Original strand, 7836904 - 7836996
Alignment:
Q  468 gagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagtta 560  Q
    ||||||||||| |||||||||||||||||| |||| |||||||| || | ||| | ||||||||||||| |||||||||| |||| |||||||    
T  7836904 gagctcacacaattaaatgtggagaagtggtgtgttcggagttcgaaccccgatccctgcataaattatacaatgtccctatcaactgagtta 7836996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 447 - 560
Target Start/End: Complemental strand, 12615875 - 12615761
Alignment:
Q  447 ggtctagtagtctattggtcggagctcacaca-tttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtcc 545  Q
    |||| ||||||||| ||||  ||||||||||| ||||| |||||||||| |||||||||||||||| |||| | ||| ||||||| | |||||||| |||    
T  12615875 ggtcaagtagtctagtggttagagctcacacaatttaattgtggagaagcggggtgtccggagttcgaatcccaacccctgcatataatatgcaatatcc 12615776  T
Q  546 ctgtcaattgagtta 560  Q
    || |||| |||||||    
T  12615775 ctatcaactgagtta 12615761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 447 - 569
Target Start/End: Original strand, 15021158 - 15021280
Alignment:
Q  447 ggtctagtagtctattggtcggagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccc 546  Q
    |||||||||||||| |||   ||||||||||||||||||||||| || || ||||||||| |||| || | ||||  ||| |||||||||||||| ||||    
T  15021158 ggtctagtagtctagtggctagagctcacacatttaaatgtggaaaaatgaggtgtccggggttcgaaccccgactcctgtataaattatgcaatctccc 15021257  T
Q  547 tgtcaattgagttatgcttacgg 569  Q
    |  ||||||||||| ||| ||||    
T  15021258 taccaattgagttaagctcacgg 15021280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 449 - 547
Target Start/End: Complemental strand, 35499658 - 35499560
Alignment:
Q  449 tctagtagtctattggtcggagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccct 547  Q
    |||||||||||| ||||  ||||||||||| ||||||||  ||||||||||| |||||||||||||   | ||| ||||||||| ||||||||||||||    
T  35499658 tctagtagtctagtggttagagctcacacaattaaatgtaaagaagtggggtatccggagttcaaactccaaccactgcataaactatgcaatgtccct 35499560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 468 - 557
Target Start/End: Complemental strand, 36932075 - 36931986
Alignment:
Q  468 gagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgag 557  Q
    ||||||||||| |||||||| |||||||||||||||||| |||| || | ||  | ||||||||||||||||||||||||| ||| ||||    
T  36932075 gagctcacacaattaaatgtagagaagtggggtgtccggggttcgaaccccggaccctgcataaattatgcaatgtccctgccaactgag 36931986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 452 - 560
Target Start/End: Original strand, 28799971 - 28800081
Alignment:
Q  452 agtagtctattggtcggagctcacacattt--aaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgt 549  Q
    ||||||||| |||| |||||||||||||||  |||||| ||||||||||||||| || ||||||| | |  || |||||||||||||||| |||||||      
T  28799971 agtagtctagtggttggagctcacacatttttaaatgtagagaagtggggtgtcaggggttcaaacccctgcccctgcataaattatgcattgtccctac 28800070  T
Q  550 caattgagtta 560  Q
    ||| |||||||    
T  28800071 caactgagtta 28800081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 468 - 573
Target Start/End: Complemental strand, 41854099 - 41853994
Alignment:
Q  468 gagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagttatgcttac 567  Q
    ||||||||| | ||||||||||||||| ||||||||||| |||  ||   || || ||||||||||||||||||||||||| ||| |||| || ||| ||    
T  41854099 gagctcacataattaaatgtggagaagcggggtgtccggggtttgaactccgtcccctgcataaattatgcaatgtccctgccaactgagctaagctcac 41854000  T
Q  568 ggggac 573  Q
    ||||||    
T  41853999 ggggac 41853994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 468 - 574
Target Start/End: Complemental strand, 6252181 - 6252074
Alignment:
Q  468 gagctcacacatttaaatgtggagaagtggggtgtccggagttc-aaatctcgacctctgcataaattatgcaatgtccctgtcaattgagttatgctta 566  Q
    |||||||||||||||||||||||||||||| |||||    |||| ||| ||| ||| || |||||||||| ||||||||||  |||||||| |||||| |    
T  6252181 gagctcacacatttaaatgtggagaagtggagtgtctaaggttcgaaacctcaacccctacataaattatacaatgtccctaccaattgagatatgctca 6252082  T
Q  567 cggggaca 574  Q
    || |||||    
T  6252081 cgaggaca 6252074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 467 - 574
Target Start/End: Original strand, 10363386 - 10363493
Alignment:
Q  467 ggagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagttatgctta 566  Q
    |||||||||||||||||||||||||||||| ||||| | || ||| ||   ||||| ||||||||||||| |||| || ||| | |||||| |||||| |    
T  10363386 ggagctcacacatttaaatgtggagaagtgaggtgttcagacttcgaactccgacccctgcataaattatacaatatctctgcctattgagctatgctca 10363485  T
Q  567 cggggaca 574  Q
     |||||||    
T  10363486 tggggaca 10363493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 467 - 545
Target Start/End: Complemental strand, 22548314 - 22548236
Alignment:
Q  467 ggagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtcc 545  Q
    ||||||||| || ||||||||||||||||||||||| ||| |||| || |  |||| ||| ||||||||||||||||||    
T  22548314 ggagctcacgcaattaaatgtggagaagtggggtgttcggggttcgaaccctgacccctgtataaattatgcaatgtcc 22548236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 480 - 570
Target Start/End: Complemental strand, 41465924 - 41465834
Alignment:
Q  480 ttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagttatgcttacggg 570  Q
    |||||||||||||||||||||||||||||||| || |  |||| ||||||| | |||||||| |||||  ||| |||| || |||||||||    
T  41465924 ttaaatgtggagaagtggggtgtccggagttcgaaccctgacccctgcatataatatgcaatatccctaccaactgagctaagcttacggg 41465834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 454 - 570
Target Start/End: Original strand, 4232556 - 4232673
Alignment:
Q  454 tagtctattggtcggagctcacacattt-aaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaa 552  Q
    ||||||| |||| |||||||| |||||| ||||||||||||| |||||||| |  |||| || |||  || || |||||||||||||||||| ||| |||    
T  4232556 tagtctagtggttggagctcatacattttaaatgtggagaagcggggtgtcagaggttcgaacctctgcccctacataaattatgcaatgtcactgccaa 4232655  T
Q  553 ttgagttatgcttacggg 570  Q
     ||||||| ||| |||||    
T  4232656 atgagttaagctcacggg 4232673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 469 - 569
Target Start/End: Original strand, 9712166 - 9712267
Alignment:
Q  469 agctcacaca-tttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagttatgcttac 567  Q
    |||||||||| ||||| |||||||||||||||||||||| |||| || | ||||| ||||||| | |||||||| |||||  ||| ||||||| ||| ||    
T  9712166 agctcacacaatttaattgtggagaagtggggtgtccggggttcgaaccccgacccctgcatataatatgcaatatccctaccaactgagttaagctcac 9712265  T
Q  568 gg 569  Q
    ||    
T  9712266 gg 9712267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 468 - 557
Target Start/End: Complemental strand, 12935842 - 12935753
Alignment:
Q  468 gagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgag 557  Q
    ||||||||||| |||||||||||||||||||| ||| || |||| || | |  || || |||||||||||||||||||||| ||| ||||    
T  12935842 gagctcacacaattaaatgtggagaagtggggcgtctggggttcgaaccccatcccctacataaattatgcaatgtccctgccaactgag 12935753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 468 - 577
Target Start/End: Original strand, 23274782 - 23274891
Alignment:
Q  468 gagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagttatgcttac 567  Q
    ||||||||||| |||| |||||| || |||||||||||| |||| ||   || || ||||||||||||||||||||||||  ||| | || || ||| ||    
T  23274782 gagctcacacaattaattgtggaaaaatggggtgtccggggttcgaactccggcccctgcataaattatgcaatgtccctaccaacttagctaagctcac 23274881  T
Q  568 ggggacagaa 577  Q
    ||||||||||    
T  23274882 ggggacagaa 23274891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 452 - 547
Target Start/End: Original strand, 28424282 - 28424378
Alignment:
Q  452 agtagtctattggtcggagctcacaca-tttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccct 547  Q
    ||||||||| ||||  ||||||||||| ||||| |||| ||||||||||| ||||| |||| || |||| |||||||||| | |||||||| |||||    
T  28424282 agtagtctagtggttagagctcacacaatttaattgtgaagaagtggggtttccggggttcgaacctcgtcctctgcatataatatgcaatttccct 28424378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 452 - 572
Target Start/End: Original strand, 36114293 - 36114413
Alignment:
Q  452 agtagtctattggtcggagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtca 551  Q
    ||||||||| ||||  ||||||||||||||||||||||||||||| | | |  || |||| || | ||||| ||||||| | ||||||||  |||| | |    
T  36114293 agtagtctaatggttagagctcacacatttaaatgtggagaagtgagatatttggggttcgaaccccgaccgctgcatataatatgcaatacccctatta 36114392  T
Q  552 attgagttatgcttacgggga 572  Q
    | ||||||| |||||||||||    
T  36114393 actgagttaagcttacgggga 36114413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 467 - 530
Target Start/End: Complemental strand, 46758346 - 46758282
Alignment:
Q  467 ggagctcacacattt-aaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcata 530  Q
    ||||||||||||||| |||||||||| ||||||||||||||||||| || | ||||| |||||||    
T  46758346 ggagctcacacattttaaatgtggaggagtggggtgtccggagttcgaaccccgacccctgcata 46758282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 447 - 543
Target Start/End: Complemental strand, 47438057 - 47437961
Alignment:
Q  447 ggtctagtagtctattggtcggagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgt 543  Q
    |||||||||| ||| |||   ||||||||||| |||||||||||||||||| |||||||| |||  || | |  || ||||||||||||||||||||    
T  47438057 ggtctagtagcctaatggctagagctcacacagttaaatgtggagaagtggagtgtccggggtttgaacccctgcccctgcataaattatgcaatgt 47437961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 467 - 552
Target Start/End: Complemental strand, 10901749 - 10901662
Alignment:
Q  467 ggagctcacacatt-taaatgtggagaagtggggtgtccggagttcaaatctcga-cctctgcataaattatgcaatgtccctgtcaa 552  Q
    |||||||||||||| ||||||||||||||||||||||  || |||| || | | | || |||||||||||||||||||||| ||||||    
T  10901749 ggagctcacacattataaatgtggagaagtggggtgttaggggttcgaaccgctatcccctgcataaattatgcaatgtccatgtcaa 10901662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 468 - 547
Target Start/End: Complemental strand, 27425190 - 27425111
Alignment:
Q  468 gagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccct 547  Q
    ||||||||||  ||||||||| |||||| |||||||||| |||| || | |  || ||||||||||||||||||||||||    
T  27425190 gagctcacacgattaaatgtgaagaagtcgggtgtccggggttcgaaccactgcccctgcataaattatgcaatgtccct 27425111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 478 - 557
Target Start/End: Original strand, 35612545 - 35612624
Alignment:
Q  478 atttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgag 557  Q
    |||||| ||||||||||||| |||||||| ||||||| | | ||||||||||| | |||||||| |||||  ||||||||    
T  35612545 atttaattgtggagaagtggagtgtccggggttcaaaccccaacctctgcatataatatgcaatctccctaccaattgag 35612624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 468 - 547
Target Start/End: Complemental strand, 38151446 - 38151367
Alignment:
Q  468 gagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccct 547  Q
    ||||||||||| ||||||||||||||||||||||| |   |||| || | ||||| |||||||||| ||||||| |||||    
T  38151446 gagctcacacaattaaatgtggagaagtggggtgttcatggttcgaaccccgacccctgcataaataatgcaatatccct 38151367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 453 - 539
Target Start/End: Original strand, 47440762 - 47440849
Alignment:
Q  453 gtagtctattggtcggagctcacacat-ttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgca 539  Q
    |||||||| |||  ||||||||||||| || |||||||||||||||||||||| | |||| || | ||||| ||||||| ||||||||    
T  47440762 gtagtctagtggctggagctcacacatatttaatgtggagaagtggggtgtccagggttcgaaccccgacccctgcatatattatgca 47440849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 469 - 539
Target Start/End: Complemental strand, 25155642 - 25155572
Alignment:
Q  469 agctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgca 539  Q
    |||||||||| ||||||||||||||||||||||||| | |||| || | ||| | ||||||||| ||||||    
T  25155642 agctcacacaattaaatgtggagaagtggggtgtccagggttcgaaccccgaaccctgcataaaatatgca 25155572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 469 - 506
Target Start/End: Original strand, 1398872 - 1398909
Alignment:
Q  469 agctcacacatttaaatgtggagaagtggggtgtccgg 506  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  1398872 agctcacacatataaatgtggagaagtggggtgtccgg 1398909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 472 - 545
Target Start/End: Complemental strand, 4886936 - 4886864
Alignment:
Q  472 tcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtcc 545  Q
    ||||||| ||| |||||||||||||||||||||||| ||| || | |||||  |||||||||||||| ||||||    
T  4886936 tcacacaattatatgtggagaagtggggtgtccgga-ttcgaaccccgacccttgcataaattatgccatgtcc 4886864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 495 - 574
Target Start/End: Original strand, 24304306 - 24304386
Alignment:
Q  495 tggggtgtccggagttcaaatctcgacctctgcata-aattatgcaatgtccctgtcaattgagttatgcttacggggaca 574  Q
    |||||||| |||||||| || | ||||| ||||||| ||| ||||| ||| |||||||||| || ||||||||||||||||    
T  24304306 tggggtgttcggagttcgaaccccgacccctgcatataataatgcattgttcctgtcaattaagctatgcttacggggaca 24304386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 452 - 547
Target Start/End: Complemental strand, 28805419 - 28805323
Alignment:
Q  452 agtagtctattggtcggagctcacaca-tttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccct 547  Q
    ||||||||| ||||  |||||||| || ||||| |||||||||||||||||||||| |||| || | ||||| |||||||   |||||||| |||||    
T  28805419 agtagtctagtggttagagctcactcaatttaattgtggagaagtggggtgtccggggttctaaccccgacccctgcatatgatatgcaatatccct 28805323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 480 - 547
Target Start/End: Complemental strand, 7876088 - 7876022
Alignment:
Q  480 ttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccct 547  Q
    |||| ||||||||||||||||||| ||||||  || | ||| | ||||||||||||||||||||||||    
T  7876088 ttaattgtggagaagtggggtgtctggagtttgaacc-cgatccctgcataaattatgcaatgtccct 7876022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 478 - 557
Target Start/End: Complemental strand, 9498058 - 9497979
Alignment:
Q  478 atttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgag 557  Q
    |||||| |||||||||||||||||||||| |||| || | ||||| || |||| | |||||||| |||||  ||||||||    
T  9498058 atttaattgtggagaagtggggtgtccggggttcgaaccccgacccctacatataatatgcaatatccctaccaattgag 9497979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 468 - 503
Target Start/End: Complemental strand, 12364851 - 12364816
Alignment:
Q  468 gagctcacacatttaaatgtggagaagtggggtgtc 503  Q
    |||||||||||| |||||||||||||||||||||||    
T  12364851 gagctcacacatataaatgtggagaagtggggtgtc 12364816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 468 - 511
Target Start/End: Complemental strand, 34259757 - 34259714
Alignment:
Q  468 gagctcacacatttaaatgtggagaagtggggtgtccggagttc 511  Q
    |||||||||| |||||||||||| ||||||||||| ||||||||    
T  34259757 gagctcacacgtttaaatgtggataagtggggtgttcggagttc 34259714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 468 - 530
Target Start/End: Original strand, 35683094 - 35683157
Alignment:
Q  468 gagctcacaca-tttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcata 530  Q
    ||||||||||| ||||| ||||||||||||| ||||||||||||| || | ||||| |||||||    
T  35683094 gagctcacacaatttaattgtggagaagtggagtgtccggagttcgaaccccgacccctgcata 35683157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 478 - 557
Target Start/End: Original strand, 48413904 - 48413983
Alignment:
Q  478 atttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgag 557  Q
    |||||| ||||||||||||| ||||||||||||| ||||||  |  ||||||| | |||||||| || ||| ||||||||    
T  48413904 atttaattgtggagaagtggagtgtccggagttcgaatctcagctcctgcatataatatgcaatatctctgccaattgag 48413983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 468 - 511
Target Start/End: Complemental strand, 49089602 - 49089559
Alignment:
Q  468 gagctcacacatttaaatgtggagaagtggggtgtccggagttc 511  Q
    ||||||||||| ||| ||||||||||||||||||||||| ||||    
T  49089602 gagctcacacaattatatgtggagaagtggggtgtccggggttc 49089559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 447 - 572
Target Start/End: Complemental strand, 3766935 - 3766809
Alignment:
Q  447 ggtctagtagtctattggtcggagctcacaca-tttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtcc 545  Q
    |||| ||||| ||| ||||  ||||||||||| ||||| ||||||||||||| |||||||| |||| || | || |  ||||||| | |||||||| |||    
T  3766935 ggtcaagtagcctagtggttagagctcacacaatttaattgtggagaagtggagtgtccggggttcgaaccccggctcctgcatataatatgcaatatcc 3766836  T
Q  546 ctgtcaattgagttatgcttacgggga 572  Q
    ||  ||| ||||||| ||| |||||||    
T  3766835 ctaccaactgagttaagctcacgggga 3766809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 468 - 541
Target Start/End: Complemental strand, 7525547 - 7525473
Alignment:
Q  468 gagctcacaca-tttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaat 541  Q
    ||||||||||| ||||| ||||||||||| | ||||||||| ||| || ||||||| ||||||| | ||||||||    
T  7525547 gagctcacacaatttaattgtggagaagtagagtgtccggaattcgaacctcgacccctgcatataatatgcaat 7525473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 471 - 557
Target Start/End: Original strand, 7778967 - 7779053
Alignment:
Q  471 ctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgag 557  Q
    |||||||| |||||||||||||||||| |||||||| |||| ||   || |   |||||||||||| |||||||||| |||| ||||    
T  7778967 ctcacacaattaaatgtggagaagtggagtgtccggggttcgaactccggcacttgcataaattatacaatgtccctatcaactgag 7779053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 478 - 572
Target Start/End: Original strand, 9877245 - 9877339
Alignment:
Q  478 atttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagttatgcttacgggga 572  Q
    |||||| |||||||||||||||||||||| |||| || | || || ||||||| | |||||||| |||||  ||| |||| || ||| |||||||    
T  9877245 atttaattgtggagaagtggggtgtccggggttcgaaccccggcccctgcatataatatgcaatatccctaccaactgagctaagctcacgggga 9877339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 478 - 572
Target Start/End: Original strand, 23102536 - 23102630
Alignment:
Q  478 atttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagttatgcttacgggga 572  Q
    |||||| |||||||||||||||||||||| |||| || | || || ||||||| | |||||||| |||||  ||| |||| || ||| |||||||    
T  23102536 atttaattgtggagaagtggggtgtccggggttcgaaccccggcccctgcatataatatgcaatatccctaccaactgagctaagctcacgggga 23102630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 468 - 541
Target Start/End: Original strand, 13730065 - 13730138
Alignment:
Q  468 gagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaat 541  Q
    ||||||||||| |||||| ||||||| ||| |||||||| ||||||| | || || ||||||| | ||||||||    
T  13730065 gagctcacacaattaaatatggagaaatggagtgtccggggttcaaaccccggcccctgcatataatatgcaat 13730138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 469 - 541
Target Start/End: Original strand, 18503448 - 18503521
Alignment:
Q  469 agctcacacattt-aaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaat 541  Q
    ||||||||||||| |||||||||||||||||||||| || |||| || |||  || ||||||| | ||||||||    
T  18503448 agctcacacattttaaatgtggagaagtggggtgtctggggttcgaacctcagcccctgcatataatatgcaat 18503521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 479 - 572
Target Start/End: Original strand, 23754993 - 23755086
Alignment:
Q  479 tttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagttatgcttacgggga 572  Q
    ||||||| ||||||||||||||||| |  |||| ||||||  || ||||||||| |||||||| |||||  | |||||| || ||| |||||||    
T  23754993 tttaaatatggagaagtggggtgtctgaggttcgaatctcagcccctgcataaaatatgcaatatccctaccgattgagctaagctcacgggga 23755086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 468 - 572
Target Start/End: Complemental strand, 35950231 - 35950126
Alignment:
Q  468 gagctcacaca-tttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagttatgctta 566  Q
    ||||||||||| ||||| ||||||||||||| |||||||| |||| || | ||||  ||||||| | |||||||| |||||  ||| |||| || ||| |    
T  35950231 gagctcacacaatttaattgtggagaagtggagtgtccggggttcgaaccccgactcctgcatataatatgcaatatccctaccaactgagctaagctca 35950132  T
Q  567 cgggga 572  Q
    ||||||    
T  35950131 cgggga 35950126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 467 - 511
Target Start/End: Complemental strand, 46645813 - 46645768
Alignment:
Q  467 ggagctcacacattt-aaatgtggagaagtggggtgtccggagttc 511  Q
    ||||||||||||||| |||||||||| |||||||||||||| ||||    
T  46645813 ggagctcacacattttaaatgtggaggagtggggtgtccggggttc 46645768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 452 - 547
Target Start/End: Original strand, 10574 - 10670
Alignment:
Q  452 agtagtctattggtcggagctcacacatttaaat-gtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccct 547  Q
    ||||||||| ||||  || |||||||| |||||| |||||||||||| |||| |||||||| |||| |  || ||||||| | |||||||| |||||    
T  10574 agtagtctaatggttagaactcacacaattaaattgtggagaagtggagtgttcggagttcgaatcacatcccctgcatataatatgcaatatccct 10670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 468 - 547
Target Start/End: Original strand, 1563706 - 1563786
Alignment:
Q  468 gagctcacaca-tttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccct 547  Q
    ||||||||||| ||||| ||| |||||||||||||||||| |||| || | || || ||||||| | |||||||| |||||    
T  1563706 gagctcacacaatttaattgtagagaagtggggtgtccggggttcgaaccccggcccctgcatataatatgcaatatccct 1563786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 468 - 511
Target Start/End: Original strand, 10244856 - 10244900
Alignment:
Q  468 gagctcacaca-tttaaatgtggagaagtggggtgtccggagttc 511  Q
    ||||||||||| ||||| |||||||||||||||||||||| ||||    
T  10244856 gagctcacacaatttaattgtggagaagtggggtgtccggggttc 10244900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 447 - 502
Target Start/End: Complemental strand, 11692514 - 11692458
Alignment:
Q  447 ggtctagtagtctattggtcggagctcacacattt-aaatgtggagaagtggggtgt 502  Q
    |||| ||||||||| ||||| |||||| ||||||| |||||| ||||||||||||||    
T  11692514 ggtcaagtagtctagtggtcagagctcgcacattttaaatgtagagaagtggggtgt 11692458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 467 - 506
Target Start/End: Complemental strand, 13702129 - 13702089
Alignment:
Q  467 ggagctcacacattt-aaatgtggagaagtggggtgtccgg 506  Q
    ||||||||||||||| |||||||||| ||||||||||||||    
T  13702129 ggagctcacacattttaaatgtggaggagtggggtgtccgg 13702089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 462 - 502
Target Start/End: Original strand, 14819110 - 14819150
Alignment:
Q  462 tggtcggagctcacacatttaaatgtggagaagtggggtgt 502  Q
    |||||| | |||||||| |||||||||||||||||||||||    
T  14819110 tggtcgaaactcacacaattaaatgtggagaagtggggtgt 14819150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 462 - 502
Target Start/End: Original strand, 15266108 - 15266148
Alignment:
Q  462 tggtcggagctcacacatttaaatgtggagaagtggggtgt 502  Q
    |||||| | |||||||| |||||||||||||||||||||||    
T  15266108 tggtcgaaactcacacaattaaatgtggagaagtggggtgt 15266148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 462 - 502
Target Start/End: Original strand, 15272893 - 15272933
Alignment:
Q  462 tggtcggagctcacacatttaaatgtggagaagtggggtgt 502  Q
    |||||| | |||||||| |||||||||||||||||||||||    
T  15272893 tggtcgaaactcacacaattaaatgtggagaagtggggtgt 15272933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 478 - 530
Target Start/End: Original strand, 16961602 - 16961654
Alignment:
Q  478 atttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcata 530  Q
    |||||| | ||||||||||| |||||||  ||||||||| |||||||||||||    
T  16961602 atttaattatggagaagtggagtgtccgtggttcaaatcccgacctctgcata 16961654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 470 - 569
Target Start/End: Complemental strand, 24188571 - 24188471
Alignment:
Q  470 gctcacaca-tttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagttatgcttacg 568  Q
    ||||||||| ||||| ||||||||||||||||||| || |||| || | ||||| ||||||| | |||||| | |||||  ||| |||| |||||| |||    
T  24188571 gctcacacaatttaattgtggagaagtggggtgtctggggttcgaaccccgacccctgcatataatatgcagtatccctaccaactgagctatgctcacg 24188472  T
Q  569 g 569  Q
    |    
T  24188471 g 24188471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 468 - 572
Target Start/End: Complemental strand, 27424941 - 27424837
Alignment:
Q  468 gagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagttatgcttac 567  Q
    ||||||||||| |||||||||||||||||| || ||||  |||| || | || || ||||||| | |||||||| |||||  ||| |||| || ||| ||    
T  27424941 gagctcacacaattaaatgtggagaagtggagtatccgaggttcgaaccccggcccctgcatataatatgcaatatcccttccaactgagctaagctcac 27424842  T
Q  568 gggga 572  Q
    |||||    
T  27424841 gggga 27424837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 468 - 570
Target Start/End: Original strand, 29281309 - 29281413
Alignment:
Q  468 gagctcacaca-tttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcata-aattatgcaatgtccctgtcaattgagttatgctt 565  Q
    ||||||||||| ||||| ||||||||||||| | |||||| |||| || | ||||| ||| ||| || |||||||| ||||| |||| ||||||| |||     
T  29281309 gagctcacacaatttaattgtggagaagtggagcgtccggtgttcgaaccccgacccctggatataaatatgcaatatccctatcaactgagttaagctc 29281408  T
Q  566 acggg 570  Q
    |||||    
T  29281409 acggg 29281413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 479 - 511
Target Start/End: Complemental strand, 34891297 - 34891265
Alignment:
Q  479 tttaaatgtggagaagtggggtgtccggagttc 511  Q
    ||||||| |||||||||||||||||||||||||    
T  34891297 tttaaatatggagaagtggggtgtccggagttc 34891265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 468 - 547
Target Start/End: Original strand, 36391871 - 36391951
Alignment:
Q  468 gagctcacaca-tttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccct 547  Q
    ||||||||||| ||||| ||||||||||||| |||||||| |||| || | ||||  ||||||| | |||||||| |||||    
T  36391871 gagctcacacaatttaattgtggagaagtggagtgtccggggttcgaaccccgactcctgcatataatatgcaatatccct 36391951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 479 - 559
Target Start/End: Complemental strand, 42268202 - 42268122
Alignment:
Q  479 tttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagtt 559  Q
    ||||||||||| ||| ||||||||  | ||||| || ||||| | ||| |||||||||||||||| ||  |||||||||||    
T  42268202 tttaaatgtggggaactggggtgtttgaagttcgaacctcgatccctgtataaattatgcaatgttccgatcaattgagtt 42268122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 447 - 506
Target Start/End: Complemental strand, 44616726 - 44616666
Alignment:
Q  447 ggtctagtagtctattggtcggagctcacaca-tttaaatgtggagaagtggggtgtccgg 506  Q
    |||| ||||||||| ||||  ||||||||||| ||||| ||||||||||||| ||||||||    
T  44616726 ggtcaagtagtctagtggttagagctcacacaatttaattgtggagaagtggagtgtccgg 44616666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 468 - 547
Target Start/End: Complemental strand, 48119573 - 48119493
Alignment:
Q  468 gagctcacacatttaaat-gtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccct 547  Q
    ||||||||||| |||||| |||||||||||| |||||||| |||| || |||| || ||||||| |  ||||||| |||||    
T  48119573 gagctcacacaattaaattgtggagaagtggagtgtccggggttcgaacctcggcccctgcatataaaatgcaatatccct 48119493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 63; Significance: 4e-27; HSPs: 66)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 467 - 557
Target Start/End: Complemental strand, 23155996 - 23155906
Alignment:
Q  467 ggagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgag 557  Q
    |||||||||||||| |||||||||||||| |||||| |||||||| || |||| |||||||||||||||||||||||||||| ||||||||    
T  23155996 ggagctcacacattaaaatgtggagaagttgggtgttcggagttcgaacctcggcctctgcataaattatgcaatgtccctgccaattgag 23155906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 469 - 553
Target Start/End: Original strand, 37684515 - 37684599
Alignment:
Q  469 agctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaat 553  Q
    |||||||||| ||||||||||| |||||||||||| ||||||| || ||||||||||||||||||||||||||||||||| ||||    
T  37684515 agctcacacaattaaatgtggataagtggggtgtctggagttcgaacctcgacctctgcataaattatgcaatgtccctgccaat 37684599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 469 - 553
Target Start/End: Original strand, 37553894 - 37553978
Alignment:
Q  469 agctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaat 553  Q
    |||||||||| ||||||||||| |||||||||||| ||||||| || |||| |||||||||||||||||||||||||||| ||||    
T  37553894 agctcacacaattaaatgtggataagtggggtgtctggagttcgaacctcggcctctgcataaattatgcaatgtccctgccaat 37553978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 452 - 560
Target Start/End: Complemental strand, 15210908 - 15210800
Alignment:
Q  452 agtagtctattggtcggagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtca 551  Q
    ||||||||| ||||| ||| ||||||||||||||||||||||||||||||||| ||||||||| | ||| | ||||||| | ||||||| || ||| |||    
T  15210908 agtagtctagtggtcagagttcacacatttaaatgtggagaagtggggtgtccagagttcaaaccccgatccctgcatagaatatgcaacgttcctatca 15210809  T
Q  552 attgagtta 560  Q
    | |||||||    
T  15210808 actgagtta 15210800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 462 - 573
Target Start/End: Complemental strand, 4068090 - 4067979
Alignment:
Q  462 tggtcggagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagttat 561  Q
    |||| |||||||||||| ||||||||||||||||||||||||||| |||| || |||| || ||||||||| |||||| |||||||  ||| |||| ||     
T  4068090 tggttggagctcacacaattaaatgtggagaagtggggtgtccggggttcgaacctcgccccctgcataaaatatgcattgtccctaccaactgagctaa 4067991  T
Q  562 gcttacggggac 573  Q
    ||| ||||||||    
T  4067990 gctcacggggac 4067979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 467 - 578
Target Start/End: Complemental strand, 24456291 - 24456182
Alignment:
Q  467 ggagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagttatgctta 566  Q
    ||||||||||||||||| ||||||||||| |||||||||| |||| ||   ||||| |||||||||||||||||||| |||| |||||||| |||||| |    
T  24456291 ggagctcacacatttaactgtggagaagt-gggtgtccggggttcgaactccgacccctgcataaattatgcaatgt-cctgccaattgagctatgctca 24456194  T
Q  567 cggggacagaat 578  Q
    |||| |||||||    
T  24456193 cgggaacagaat 24456182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 449 - 560
Target Start/End: Original strand, 33018475 - 33018585
Alignment:
Q  449 tctagtagtctattggtcggagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctg 548  Q
    |||| ||||||| |||  ||||||||||||| ||||||||||||||||||||||||| ||||| || | ||||| |||||||||||||||||| |||||     
T  33018475 tctattagtctagtggctggagctcacacatataaatgtggagaagtggggtgtccgaagttcgaaccccgacc-ctgcataaattatgcaatatcccta 33018573  T
Q  549 tcaattgagtta 560  Q
     || ||||||||    
T  33018574 ccagttgagtta 33018585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 447 - 540
Target Start/End: Original strand, 39234686 - 39234779
Alignment:
Q  447 ggtctagtagtctattggtcggagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaa 540  Q
    |||||||||| ||| || | | |||||||||||||||| ||||||||||||||||||||| |||| |||| ||||| ||||||||| |||||||    
T  39234686 ggtctagtagcctaatgattgaagctcacacatttaaacgtggagaagtggggtgtccggggttcgaatcccgacccctgcataaaatatgcaa 39234779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 449 - 573
Target Start/End: Complemental strand, 3198448 - 3198324
Alignment:
Q  449 tctagtagtctattggtcggagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctg 548  Q
    |||||||||||| |||  ||| |||||| | |||||||||||||||| |||||||||| |||| || ||| ||| ||||||| ||||||||||||||||     
T  3198448 tctagtagtctagtggcgggacctcacataattaaatgtggagaagtagggtgtccggggttcgaacctcaacccctgcatatattatgcaatgtcccta 3198349  T
Q  549 tcaattgagttatgcttacggggac 573  Q
     ||| |||| || ||| ||||||||    
T  3198348 ccaactgagctaagctcacggggac 3198324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 451 - 547
Target Start/End: Original strand, 28822707 - 28822803
Alignment:
Q  451 tagtagtctattggtcggagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccct 547  Q
    |||||||||| |||| ||||||||||   |||||| |||||||||||||||| ||| |||| |||| ||| ||||||||||||||| ||||||||||    
T  28822707 tagtagtctagtggttggagctcacattattaaatatggagaagtggggtgttcggggttcgaatcccgatctctgcataaattatacaatgtccct 28822803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 471 - 560
Target Start/End: Original strand, 17064829 - 17064918
Alignment:
Q  471 ctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagtta 560  Q
    |||||||| ||||||||||||||||||||||||||| |||||||  ||| || ||||||| | |||||||| |||||  |||||||||||    
T  17064829 ctcacacaattaaatgtggagaagtggggtgtccggggttcaaacgtcggcccctgcatataatatgcaatatccctaccaattgagtta 17064918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 468 - 573
Target Start/End: Complemental strand, 36270843 - 36270738
Alignment:
Q  468 gagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagttatgcttac 567  Q
    ||||||||||| ||||||||||||||||||| ||| ||| |||| || |||||||  |||||||| ||||||||||  || |||| ||||||| ||| ||    
T  36270843 gagctcacacacttaaatgtggagaagtgggatgttcggggttcgaacctcgacccttgcataaaatatgcaatgtttctatcaactgagttaagctcac 36270744  T
Q  568 ggggac 573  Q
    ||||||    
T  36270743 ggggac 36270738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 466 - 557
Target Start/End: Complemental strand, 10364405 - 10364317
Alignment:
Q  466 cggagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgag 557  Q
    |||||||||||||||||||||||||||||||| |||||||| |||| || | ||||| ||  |||||||||||||||| |||| ||||||||    
T  10364405 cggagctcacacatttaaatgtggagaagtggagtgtccggggttccaaccccgacc-ct--ataaattatgcaatgttcctgccaattgag 10364317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 483 - 573
Target Start/End: Original strand, 9196095 - 9196185
Alignment:
Q  483 aatgtggagaagtggggtgtccggagttcaaatctcga-cctctgcataaattatgcaatgtccctgtcaattgagttatgcttacggggac 573  Q
    |||||||||||||||| |||||||||||| || ||| | || ||||||||||||||||||||||||| |||||||  |||||| ||||||||    
T  9196095 aatgtggagaagtgggttgtccggagttcgaa-ctccatcccctgcataaattatgcaatgtccctgccaattgaactatgctcacggggac 9196185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 451 - 557
Target Start/End: Original strand, 17693137 - 17693242
Alignment:
Q  451 tagtagtctattggtcggagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtc 550  Q
    |||||| ||| | ||||||||||||||||||| |||| |||||||| |||||| || |||| ||   ||||| |||||||||||||||| |||||||| |    
T  17693137 tagtagcctagtagtcggagctcacacatttagatgtagagaagtgcggtgtctggggttcgaactccgacc-ctgcataaattatgcagtgtccctgcc 17693235  T
Q  551 aattgag 557  Q
    |||||||    
T  17693236 aattgag 17693242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 468 - 572
Target Start/End: Complemental strand, 6558904 - 6558799
Alignment:
Q  468 gagctcacaca-tttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagttatgctta 566  Q
    ||||||||||| ||||| ||||||||||| ||||||||||||||| || | ||||| ||||||| | |||||||| |||||  |||||||| || ||| |    
T  6558904 gagctcacacaatttaattgtggagaagtagggtgtccggagttcgaaccccgacccctgcatataatatgcaatatccctaccaattgagctaagctca 6558805  T
Q  567 cgggga 572  Q
    ||||||    
T  6558804 cgggga 6558799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 447 - 544
Target Start/End: Original strand, 41083485 - 41083581
Alignment:
Q  447 ggtctagtagtctattggtcggagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtc 544  Q
    |||||||||||||| |||   |||||| || | ||||| |||||||||||||||||||||| ||| || | ||||| |||||||||||||||||||||    
T  41083485 ggtctagtagtctagtggctagagctcccaaaattaaacgtggagaagtggggtgtccgga-ttcgaaccccgacccctgcataaattatgcaatgtc 41083581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 452 - 539
Target Start/End: Original strand, 885109 - 885197
Alignment:
Q  452 agtagtctattggtcggagctcacaca-tttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgca 539  Q
    ||||||||| |||| |||||||||||| ||||||| |||||||||| ||||| |||||||| ||  ||||| |||||||| ||||||||    
T  885109 agtagtctagtggttggagctcacacattttaaatatggagaagtgaggtgttcggagttcgaacatcgacttctgcatagattatgca 885197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 468 - 540
Target Start/End: Complemental strand, 8571895 - 8571823
Alignment:
Q  468 gagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaa 540  Q
    ||||||||||| |||||||||||||||| |||||| ||| |||| || | ||||| |||||||||||||||||    
T  8571895 gagctcacacaattaaatgtggagaagtagggtgttcggggttcgaaccccgacccctgcataaattatgcaa 8571823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 468 - 547
Target Start/End: Original strand, 20145532 - 20145611
Alignment:
Q  468 gagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccct 547  Q
    ||||||||||| ||||||||||||||||||||||||||  |||| || | || ||  ||||||||||||||||| |||||    
T  20145532 gagctcacacaattaaatgtggagaagtggggtgtccgaggttcgaaccccggcccttgcataaattatgcaatatccct 20145611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 447 - 547
Target Start/End: Complemental strand, 8241174 - 8241073
Alignment:
Q  447 ggtctagtagtctattggtcggagctcacacattt-aaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtcc 545  Q
    ||||| |||| ||| ||||  |||||||||||||| ||||||||||||||||||||||||| |||| || | |||||  |||||| | |||||||| |||    
T  8241174 ggtctggtagcctagtggttagagctcacacattttaaatgtggagaagtggggtgtccggggttcgaaccccgacccttgcatataatatgcaatatcc 8241075  T
Q  546 ct 547  Q
    ||    
T  8241074 ct 8241073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 448 - 505
Target Start/End: Complemental strand, 24477947 - 24477890
Alignment:
Q  448 gtctagtagtctattggtcggagctcacacatttaaatgtggagaagtggggtgtccg 505  Q
    ||||||||| ||| |||  |||||||||||| ||||||||||||||||||||||||||    
T  24477947 gtctagtagactagtggctggagctcacacaattaaatgtggagaagtggggtgtccg 24477890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 467 - 547
Target Start/End: Original strand, 28758384 - 28758465
Alignment:
Q  467 ggagctcacacatttaaatgtggagaagtggggtgtccggag-ttcaaatctcgacctctgcataaattatgcaatgtccct 547  Q
    |||||||| ||| ||||||||||||||||| ||||||||||| ||  || | ||||  ||||||||||||||||||||||||    
T  28758384 ggagctcatacaattaaatgtggagaagtgaggtgtccggaggtttgaaccccgactcctgcataaattatgcaatgtccct 28758465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 467 - 530
Target Start/End: Complemental strand, 3741058 - 3740994
Alignment:
Q  467 ggagctcacacattt-aaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcata 530  Q
    ||||||||||||||| ||||||||||||||||||||||||| |||| || | ||||| |||||||    
T  3741058 ggagctcacacattttaaatgtggagaagtggggtgtccggggttcgaaccccgacccctgcata 3740994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 452 - 572
Target Start/End: Complemental strand, 12891675 - 12891555
Alignment:
Q  452 agtagtctattggtcggagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtca 551  Q
    ||||||||| ||||   ||||||||||| |||||||||||||||||||||||||| |||| || | || || || |||| | |||||||| |||||  ||    
T  12891675 agtagtctagtggttatagctcacacatataaatgtggagaagtggggtgtccggggttcgaaccccggcccctacatataatatgcaatatccctacca 12891576  T
Q  552 attgagttatgcttacgggga 572  Q
    | |||| || ||| |||||||    
T  12891575 actgagctaagctcacgggga 12891555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 468 - 555
Target Start/End: Original strand, 12053479 - 12053566
Alignment:
Q  468 gagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattg 555  Q
    ||||||||||| ||||  |||||||||||||||||| || |||| || | |  || || |||||| ||||||||||||||||||||||    
T  12053479 gagctcacacaattaatcgtggagaagtggggtgtctggggttcgaacccctgcccctacataaaatatgcaatgtccctgtcaattg 12053566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 452 - 543
Target Start/End: Complemental strand, 12474099 - 12474009
Alignment:
Q  452 agtagtctattggtcggagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgt 543  Q
    ||||||||| ||||  ||||||||||| |||| |||||||||||||||||| |||||||| ||  ||  || ||||||||||||| ||||||    
T  12474099 agtagtctagtggttagagctcacacaattaa-tgtggagaagtggggtgttcggagttcgaacttcagcccctgcataaattatacaatgt 12474009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 469 - 547
Target Start/End: Complemental strand, 3166082 - 3166004
Alignment:
Q  469 agctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccct 547  Q
    |||||||||| ||||||||||| |||||||| |||||  |||| || | | ||| || |||||||||||||||||||||    
T  3166082 agctcacacagttaaatgtggaaaagtggggcgtccgaggttcgaaccccaacccctacataaattatgcaatgtccct 3166004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 470 - 543
Target Start/End: Original strand, 7545367 - 7545441
Alignment:
Q  470 gctcacacattt-aaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgt 543  Q
    |||||||||||| |||||||||||||||||||||||||  ||| ||||  |||| ||||||| | ||||||||||    
T  7545367 gctcacacattttaaatgtggagaagtggggtgtccgggattcgaatcctgacccctgcatataatatgcaatgt 7545441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 468 - 530
Target Start/End: Complemental strand, 27241743 - 27241681
Alignment:
Q  468 gagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcata 530  Q
    |||||| ||||||| |||||||||||||||||| ||||||||| ||| | ||||| |||||||    
T  27241743 gagctcgcacattttaatgtggagaagtggggtatccggagtttaaaccccgacccctgcata 27241681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 467 - 536
Target Start/End: Complemental strand, 7171831 - 7171762
Alignment:
Q  467 ggagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattat 536  Q
    |||||||||||| |||| ||||||||||||||||||| || |||| || | || || |||||||||||||    
T  7171831 ggagctcacacaattaattgtggagaagtggggtgtctggggttcgaaccccggcccctgcataaattat 7171762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 453 - 545
Target Start/End: Complemental strand, 7443457 - 7443364
Alignment:
Q  453 gtagtctattggtcggagctcacacatt-taaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtcc 545  Q
    |||| ||| |||| |||||||||||||| |||||||||||||||||||||||  | |||| || | |  || ||||||||||||| ||||||||    
T  7443457 gtagcctagtggttggagctcacacattataaatgtggagaagtggggtgtcaagggttcgaacccctgcccctgcataaattatacaatgtcc 7443364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 468 - 572
Target Start/End: Complemental strand, 15241499 - 15241394
Alignment:
Q  468 gagctcacaca-tttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagttatgctta 566  Q
    ||||||||||| ||||| |||||||||||||||||||||  |||| || | ||||| ||||||| | |||||||| | ||| |||| |||| || ||| |    
T  15241499 gagctcacacaatttaattgtggagaagtggggtgtccgaggttcgaaccccgacccctgcatataatatgcaatattcctatcaactgagctaagctca 15241400  T
Q  567 cgggga 572  Q
    ||||||    
T  15241399 cgggga 15241394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 468 - 547
Target Start/End: Complemental strand, 18928823 - 18928743
Alignment:
Q  468 gagctcacaca-tttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccct 547  Q
    ||||||||||| |||||||||||| ||||| ||||||||  |||| ||   ||||| |||||||||||||||||| |||||    
T  18928823 gagctcacacaatttaaatgtggaaaagtgaggtgtccgtggttcgaacaccgacccctgcataaattatgcaatatccct 18928743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 468 - 544
Target Start/End: Complemental strand, 32550278 - 32550202
Alignment:
Q  468 gagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtc 544  Q
    ||||||||||| |||||||||||| |||||||||| ||| |||| || | |  ||  ||||||||||||||||||||    
T  32550278 gagctcacacaattaaatgtggagtagtggggtgtacggggttcgaacccctgcccatgcataaattatgcaatgtc 32550202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 468 - 548
Target Start/End: Original strand, 37636828 - 37636908
Alignment:
Q  468 gagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctg 548  Q
    ||||| ||||| ||||||||||||||||| ||| | ||| |||  || |||  || |||||||||||||||||||||||||    
T  37636828 gagcttacacaattaaatgtggagaagtgaggtatacggggtttgaacctcagcccctgcataaattatgcaatgtccctg 37636908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 469 - 572
Target Start/End: Complemental strand, 40091579 - 40091475
Alignment:
Q  469 agctcacaca-tttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagttatgcttac 567  Q
    |||||||||| ||||| ||||||||||||| ||||||||||||| || |||| |   |||||| | |||||||| |||||  ||| ||||||| ||| ||    
T  40091579 agctcacacaatttaattgtggagaagtggagtgtccggagttcgaacctcggctcttgcatataatatgcaatatccctaccaactgagttaagctcac 40091480  T
Q  568 gggga 572  Q
    |||||    
T  40091479 gggga 40091475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 471 - 506
Target Start/End: Complemental strand, 831688 - 831653
Alignment:
Q  471 ctcacacatttaaatgtggagaagtggggtgtccgg 506  Q
    |||||||| |||||||||||||||||||||||||||    
T  831688 ctcacacaattaaatgtggagaagtggggtgtccgg 831653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 468 - 511
Target Start/End: Complemental strand, 9125764 - 9125721
Alignment:
Q  468 gagctcacacatttaaatgtggagaagtggggtgtccggagttc 511  Q
    |||||||||||| |||||||||||||||| ||||||||| ||||    
T  9125764 gagctcacacatataaatgtggagaagtgaggtgtccggggttc 9125721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 472 - 511
Target Start/End: Original strand, 14804954 - 14804993
Alignment:
Q  472 tcacacatttaaatgtggagaagtggggtgtccggagttc 511  Q
    ||||||| ||||||||||||||||||||||||||| ||||    
T  14804954 tcacacaattaaatgtggagaagtggggtgtccggggttc 14804993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 468 - 511
Target Start/End: Complemental strand, 16971722 - 16971679
Alignment:
Q  468 gagctcacacatttaaatgtggagaagtggggtgtccggagttc 511  Q
    |||||||| || || |||||||||||||||||||||||||||||    
T  16971722 gagctcacgcaattgaatgtggagaagtggggtgtccggagttc 16971679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 467 - 511
Target Start/End: Original strand, 17891824 - 17891870
Alignment:
Q  467 ggagctcacacattt--aaatgtggagaagtggggtgtccggagttc 511  Q
    |||||||||||||||  ||||||||||||||||||||||||| ||||    
T  17891824 ggagctcacacattttaaaatgtggagaagtggggtgtccggggttc 17891870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 472 - 547
Target Start/End: Complemental strand, 20430663 - 20430588
Alignment:
Q  472 tcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccct 547  Q
    ||||||| ||||| |||||||| ||||||||||||| ||| || | |  ||||||||||||||||  |||||||||    
T  20430663 tcacacaattaaaggtggagaaatggggtgtccggatttcgaaccccagcctctgcataaattatataatgtccct 20430588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 452 - 548
Target Start/End: Original strand, 25460731 - 25460828
Alignment:
Q  452 agtagtctattggtcggagctcacacattt--aaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctg 548  Q
    ||||||||| ||||  ||||||||||||||  ||||||||||||||||||||| ||| |||| || | |  || ||||||||||||| |||||| ||||    
T  25460731 agtagtctagtggttagagctcacacatttttaaatgtggagaagtggggtgttcggggttcgaa-ccctgcccctgcataaattatacaatgttcctg 25460828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 447 - 570
Target Start/End: Complemental strand, 38696813 - 38696691
Alignment:
Q  447 ggtctagtagtctattggtcggagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccc 546  Q
    |||| ||||||||| |||   ||||||||||||||||||||| |||||||| |||||| | |||| || | || ||  |||||| | |||| ||| ||||    
T  38696813 ggtcaagtagtctagtggatagagctcacacatttaaatgtgaagaagtggagtgtccagggttcgaaccccg-ccattgcatataatatgtaatatccc 38696715  T
Q  547 tgtcaattgagttatgcttacggg 570  Q
    | |||| ||||||| |||||||||    
T  38696714 tatcaactgagttaagcttacggg 38696691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 452 - 505
Target Start/End: Original strand, 1269118 - 1269172
Alignment:
Q  452 agtagtctattggtcggagctcacaca-tttaaatgtggagaagtggggtgtccg 505  Q
    ||||| ||||||||| ||| ||||||| ||||| |||||||||||||||||||||    
T  1269118 agtagcctattggtcagagttcacacaatttaattgtggagaagtggggtgtccg 1269172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 468 - 557
Target Start/End: Original strand, 3515433 - 3515522
Alignment:
Q  468 gagctcacaca-tttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgag 557  Q
    ||||||||||| ||||| ||||||||||||| ||||||||| ||| || || |||| ||||||| | || ||||| |||||||||| ||||    
T  3515433 gagctcacacaatttaattgtggagaagtggagtgtccggaattcgaacct-gacccctgcatataatacgcaatatccctgtcaactgag 3515522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 492 - 573
Target Start/End: Original strand, 4674835 - 4674917
Alignment:
Q  492 aagtggggtgtccggagttcaaatctcgacctctgcata-aattatgcaatgtccctgtcaattgagttatgcttacggggac 573  Q
    ||||||||||||||| |||| || | ||||| ||||||| ||| ||||| |||||||||||| |||| |||||| ||| ||||    
T  4674835 aagtggggtgtccggggttcgaaccccgacccctgcatataataatgcattgtccctgtcaactgagctatgctcacgaggac 4674917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 454 - 503
Target Start/End: Original strand, 6734692 - 6734742
Alignment:
Q  454 tagtctattggtcggagctcacacattt-aaatgtggagaagtggggtgtc 503  Q
    ||||||| |||  ||||||||||||||| ||||||||||||||||||||||    
T  6734692 tagtctagtggctggagctcacacattttaaatgtggagaagtggggtgtc 6734742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 447 - 572
Target Start/End: Complemental strand, 11897372 - 11897246
Alignment:
Q  447 ggtctagtagtctattggtcggagctcacaca-tttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtcc 545  Q
    |||| ||||||||| |||   ||||||||||| ||||| ||||||||||||| |||||||| |||| || | ||||  ||||||| | |||||||| |||    
T  11897372 ggtcaagtagtctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggggttcgaaccccgactcctgcatataatatgcaatatcc 11897273  T
Q  546 ctgtcaattgagttatgcttacgggga 572  Q
    ||  ||| |||| || ||| |||||||    
T  11897272 ctaccaactgagctaagctcacgggga 11897246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 451 - 509
Target Start/End: Complemental strand, 23427109 - 23427051
Alignment:
Q  451 tagtagtctattggtcggagctcacacatttaaatgtggagaagtggggtgtccggagt 509  Q
    ||||| |||| |||| |||||||||| | |||||||||||||||||| |||| ||||||    
T  23427109 tagtaatctaatggttggagctcacagaattaaatgtggagaagtggagtgttcggagt 23427051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 468 - 541
Target Start/End: Original strand, 30783681 - 30783755
Alignment:
Q  468 gagctcacacatttaaatg-tggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaat 541  Q
    ||||||||||| ||||||  ||||||||||  ||||||||||||| || | ||||||||||||| | ||||||||    
T  30783681 gagctcacacaattaaatcatggagaagtgaagtgtccggagttcgaaccccgacctctgcatataatatgcaat 30783755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 479 - 541
Target Start/End: Complemental strand, 32623484 - 32623422
Alignment:
Q  479 tttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaat 541  Q
    |||||| |||||||| ||||||||||||||||| || ||||||| ||| ||| | ||||||||    
T  32623484 tttaaacgtggagaaatggggtgtccggagttcgaacctcgacccctgtatataatatgcaat 32623422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 452 - 541
Target Start/End: Complemental strand, 36124518 - 36124428
Alignment:
Q  452 agtagtctattggtcggagctcacacatttaaat-gtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaat 541  Q
    ||||||||| ||||  ||||||||||| |||||| |||||||||||| ||||||||  ||| || | ||||| ||||||| | ||||||||    
T  36124518 agtagtctagtggttagagctcacacagttaaattgtggagaagtggagtgtccgggattcgaaccccgacccctgcatataatatgcaat 36124428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 469 - 547
Target Start/End: Original strand, 36716827 - 36716905
Alignment:
Q  469 agctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccct 547  Q
    ||||||||||| ||||||||||||||| | |||||||| ||||||| | ||  | ||||||| | |||||||| |||||    
T  36716827 agctcacacatataaatgtggagaagttgagtgtccggggttcaaaccccggtccctgcatataatatgcaatatccct 36716905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 471 - 541
Target Start/End: Original strand, 40276413 - 40276483
Alignment:
Q  471 ctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaat 541  Q
    |||||||| |||| ||||||||||||||| |||||| |||| ||||||  || ||||||| | ||||||||    
T  40276413 ctcacacaattaattgtggagaagtggggcgtccggggttcgaatctcagcccctgcatataatatgcaat 40276483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 448 - 505
Target Start/End: Complemental strand, 28906928 - 28906871
Alignment:
Q  448 gtctagtagtctattggtcggagctcacacatttaaatgtggagaagtggggtgtccg 505  Q
    ||||||||| ||||||||  ||||  ||||| |||||||||||||||||| |||||||    
T  28906928 gtctagtagcctattggttagagcatacacaattaaatgtggagaagtggagtgtccg 28906871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 448 - 505
Target Start/End: Complemental strand, 28943323 - 28943266
Alignment:
Q  448 gtctagtagtctattggtcggagctcacacatttaaatgtggagaagtggggtgtccg 505  Q
    ||||||||| ||||||||  ||||  ||||| |||||||||||||||||| |||||||    
T  28943323 gtctagtagcctattggttagagcatacacaattaaatgtggagaagtggagtgtccg 28943266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 468 - 552
Target Start/End: Complemental strand, 41156431 - 41156346
Alignment:
Q  468 gagctcacac-atttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaa 552  Q
    |||||||||| |||||| ||||||||||||| ||||||||||||| || | || |  ||||||| | |||||||| ||||| ||||    
T  41156431 gagctcacacgatttaattgtggagaagtggagtgtccggagttcgaaccccggctcctgcatataatatgcaatatccctatcaa 41156346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 467 - 506
Target Start/End: Original strand, 3821387 - 3821427
Alignment:
Q  467 ggagctcacacattt-aaatgtggagaagtggggtgtccgg 506  Q
    ||||||||||||||| ||||||||||||||||||| |||||    
T  3821387 ggagctcacacattttaaatgtggagaagtggggtttccgg 3821427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 468 - 504
Target Start/End: Complemental strand, 11541791 - 11541755
Alignment:
Q  468 gagctcacacatttaaatgtggagaagtggggtgtcc 504  Q
    ||||||||||| ||||||||||||||||| |||||||    
T  11541791 gagctcacacaattaaatgtggagaagtgaggtgtcc 11541755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 478 - 570
Target Start/End: Original strand, 14641087 - 14641179
Alignment:
Q  478 atttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagttatgcttacggg 570  Q
    |||||| ||||||||||||| |||||||| |||| || | || |  ||||||| | |||||||| |||||  ||||||||||| ||| |||||    
T  14641087 atttaattgtggagaagtggagtgtccggggttcgaaccccggctcctgcatataatatgcaatatccctaccaattgagttaagctcacggg 14641179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 468 - 511
Target Start/End: Complemental strand, 16789173 - 16789129
Alignment:
Q  468 gagctcacaca-tttaaatgtggagaagtggggtgtccggagttc 511  Q
    ||||||||||| ||||| |||||||||||||||||||||| ||||    
T  16789173 gagctcacacaatttaattgtggagaagtggggtgtccggggttc 16789129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 467 - 499
Target Start/End: Original strand, 29646080 - 29646112
Alignment:
Q  467 ggagctcacacatttaaatgtggagaagtgggg 499  Q
    |||||||||||| ||||||||||||||||||||    
T  29646080 ggagctcacacaattaaatgtggagaagtgggg 29646112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 467 - 530
Target Start/End: Complemental strand, 33909109 - 33909045
Alignment:
Q  467 ggagctcacacattt-aaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcata 530  Q
    |||||||| |||||| |||||||||||||| |||||||||| |||| || | |||||||| ||||    
T  33909109 ggagctcatacattttaaatgtggagaagttgggtgtccggggttcgaaccccgacctctacata 33909045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 468 - 547
Target Start/End: Original strand, 36888362 - 36888442
Alignment:
Q  468 gagctcacaca-tttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccct 547  Q
    ||||||||||| ||||| ||||||||||||| |||||||| |||| || | ||||  ||||||| | |||||||| |||||    
T  36888362 gagctcacacaatttaattgtggagaagtggagtgtccggggttcgaaccccgactcctgcatataatatgcaatatccct 36888442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 59; Significance: 1e-24; HSPs: 90)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 447 - 573
Target Start/End: Original strand, 47469020 - 47469146
Alignment:
Q  447 ggtctagtagtctattggtcggagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccc 546  Q
    ||||| |||| ||| ||||  ||||||||||| ||||||||||||||||||||||||||| |||| || |||  || |||||||||||||||||||||||    
T  47469020 ggtcttgtagcctagtggttagagctcacacaattaaatgtggagaagtggggtgtccggggttcgaacctcagcccctgcataaattatgcaatgtccc 47469119  T
Q  547 tgtcaattgagttatgcttacggggac 573  Q
    || ||| |||| || ||| ||||||||    
T  47469120 tgccaactgagctaagctcacggggac 47469146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 448 - 556
Target Start/End: Original strand, 26909818 - 26909926
Alignment:
Q  448 gtctagtagtctattggtcggagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccct 547  Q
    ||||||||| ||| |||  | |||||||||||||||||||||||||||||||||||| | |||| || | |  |||||||||||||||||||||||||||    
T  26909818 gtctagtagcctagtggctgaagctcacacatttaaatgtggagaagtggggtgtccagggttcgaacccccgcctctgcataaattatgcaatgtccct 26909917  T
Q  548 gtcaattga 556  Q
    | |||||||    
T  26909918 gccaattga 26909926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 448 - 567
Target Start/End: Original strand, 33843143 - 33843262
Alignment:
Q  448 gtctagtagtctattggtcggagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccct 547  Q
    |||||||||||||||||  |||||||||||| ||||| ||| ||||||||||||| ||| |||| || | |||||||||||||||||||||||| || ||    
T  33843143 gtctagtagtctattggctggagctcacacaattaaacgtgaagaagtggggtgttcggggttcgaaccccgacctctgcataaattatgcaatatctct 33843242  T
Q  548 gtcaattgagttatgcttac 567  Q
     |||| |||| || ||||||    
T  33843243 atcaactgagctaagcttac 33843262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 448 - 567
Target Start/End: Complemental strand, 33950836 - 33950717
Alignment:
Q  448 gtctagtagtctattggtcggagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccct 547  Q
    |||||||||||||||||  |||||||||||| ||||| ||| ||||||||||||| ||| |||| || | |||||||||||||||||||||||| || ||    
T  33950836 gtctagtagtctattggctggagctcacacaattaaacgtgaagaagtggggtgttcggggttcgaaccccgacctctgcataaattatgcaatatctct 33950737  T
Q  548 gtcaattgagttatgcttac 567  Q
     |||| |||| || ||||||    
T  33950736 atcaactgagctaagcttac 33950717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 448 - 573
Target Start/End: Complemental strand, 11860164 - 11860039
Alignment:
Q  448 gtctagtagtctattggtcggagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccct 547  Q
    ||||||||||||| ||| |||| |||||||| ||||||||||||||||||||||||||| |||| || | ||||| ||  ||||||||||||||||  ||    
T  11860164 gtctagtagtctagtggccggacctcacacaattaaatgtggagaagtggggtgtccggggttcgaaccccgacccctatataaattatgcaatgtttct 11860065  T
Q  548 gtcaattgagttatgcttacggggac 573  Q
    | ||| |||| || ||| ||||||||    
T  11860064 gccaactgagctaagctcacggggac 11860039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 468 - 558
Target Start/End: Original strand, 23991232 - 23991322
Alignment:
Q  468 gagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagt 558  Q
    ||||||||||| ||||||||||||||||||||||||| | |||| || | || || ||||||||||||||||||||||||| ||| |||||    
T  23991232 gagctcacacaattaaatgtggagaagtggggtgtccagggttcgaaccccggcccctgcataaattatgcaatgtccctgccaactgagt 23991322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 469 - 557
Target Start/End: Complemental strand, 10632796 - 10632707
Alignment:
Q  469 agctcacacatttaaatgtggagaagt-ggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgag 557  Q
    ||||||||||||||||||||||||||| ||||||||||| |||| || | ||||| ||||||||||||||||||||| | | ||||||||    
T  10632796 agctcacacatttaaatgtggagaagtgggggtgtccggggttcgaaccccgacccctgcataaattatgcaatgtctccgccaattgag 10632707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 468 - 545
Target Start/End: Original strand, 31124606 - 31124683
Alignment:
Q  468 gagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtcc 545  Q
    ||||||||||| ||||||||||||||||||||| |||||||||| || | || || ||||||||||||||||||||||    
T  31124606 gagctcacacaattaaatgtggagaagtggggtatccggagttcgaaccccggcccctgcataaattatgcaatgtcc 31124683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 447 - 547
Target Start/End: Complemental strand, 11333787 - 11333687
Alignment:
Q  447 ggtctagtagtctattggtcggagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccc 546  Q
    |||||||||||||| ||    ||||||||||| ||||||||||||||||||||||||||| |||| ||   || || |||||||||||||||||||||||    
T  11333787 ggtctagtagtctagtgactagagctcacacaattaaatgtggagaagtggggtgtccggggttcgaactccggcccctgcataaattatgcaatgtccc 11333688  T
Q  547 t 547  Q
    |    
T  11333687 t 11333687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 447 - 547
Target Start/End: Complemental strand, 11491808 - 11491708
Alignment:
Q  447 ggtctagtagtctattggtcggagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccc 546  Q
    |||||||||||||| ||    ||||||||||| ||||||||||||||||||||||||||| |||| ||   || || |||||||||||||||||||||||    
T  11491808 ggtctagtagtctagtgactagagctcacacaattaaatgtggagaagtggggtgtccggggttcgaactccggcccctgcataaattatgcaatgtccc 11491709  T
Q  547 t 547  Q
    |    
T  11491708 t 11491708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 449 - 573
Target Start/End: Original strand, 30245973 - 30246097
Alignment:
Q  449 tctagtagtctattggtcggagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctg 548  Q
    |||||||||||| |||   ||||||| ||| ||||||||||||||||||||| | ||| |||| |||| ||||| |||||| |||||||||||||||||     
T  30245973 tctagtagtctagtggctagagctcatacaattaaatgtggagaagtggggtattcggggttcgaatcccgacccctgcatcaattatgcaatgtcccta 30246072  T
Q  549 tcaattgagttatgcttacggggac 573  Q
     ||| |||| || ||| ||||||||    
T  30246073 ccaaatgagctaagctcacggggac 30246097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 467 - 547
Target Start/End: Complemental strand, 37280804 - 37280725
Alignment:
Q  467 ggagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccct 547  Q
    |||||||||||| |||||||||||||||||||||| ||||||||| |||| ||||| ||  ||||||||||||||||||||    
T  37280804 ggagctcacacaattaaatgtggagaagtggggtg-ccggagttcgaatcccgacccctatataaattatgcaatgtccct 37280725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 468 - 547
Target Start/End: Original strand, 36666544 - 36666623
Alignment:
Q  468 gagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccct 547  Q
    ||||||||||| |||| |||||||||||||||||||||| |||| || | || || ||||||||||||||||||||||||    
T  36666544 gagctcacacaattaattgtggagaagtggggtgtccggggttcgaaccccggcccctgcataaattatgcaatgtccct 36666623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 468 - 574
Target Start/End: Complemental strand, 1247357 - 1247251
Alignment:
Q  468 gagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagttatgcttac 567  Q
    ||||||| ||| ||||||||||||||||| |||||| || |||| || ||||||| |||||||||||||||||| ||| | |||| ||||||| ||| ||    
T  1247357 gagctcaaacaattaaatgtggagaagtgaggtgtctggggttcgaacctcgacccctgcataaattatgcaatatccttatcaactgagttaagctcac 1247258  T
Q  568 ggggaca 574  Q
     ||||||    
T  1247257 agggaca 1247251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 448 - 542
Target Start/End: Original strand, 3742265 - 3742359
Alignment:
Q  448 gtctagtagtctattggtcggagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatg 542  Q
    ||||||||| ||| |||| ||| ||||||||| |||||||||||||||||||||||||| |||| || | ||||| ||| |||||| ||||||||    
T  3742265 gtctagtagcctagtggttggaactcacacatgtaaatgtggagaagtggggtgtccggggttcgaaccccgacccctgtataaatcatgcaatg 3742359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 467 - 557
Target Start/End: Original strand, 25036229 - 25036319
Alignment:
Q  467 ggagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgag 557  Q
    |||||||||||| |||||||||||||| |||||||| ||| |||| |||| || || |||||||||||||||||||| |||| ||| ||||    
T  25036229 ggagctcacacaattaaatgtggagaaatggggtgttcggggttcgaatcccggcccctgcataaattatgcaatgttcctgccaactgag 25036319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 467 - 557
Target Start/End: Original strand, 25041441 - 25041531
Alignment:
Q  467 ggagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgag 557  Q
    |||||||||||| |||||||||||||| |||||||| ||| |||| |||| || || |||||||||||||||||||| |||| ||| ||||    
T  25041441 ggagctcacacaattaaatgtggagaaatggggtgttcggggttcgaatcccggcccctgcataaattatgcaatgttcctgccaactgag 25041531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 448 - 570
Target Start/End: Original strand, 31401193 - 31401315
Alignment:
Q  448 gtctagtagtctattggtcggagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccct 547  Q
    ||||||||| ||| ||||  ||||||||||| |||| |||||||| ||||||||||||| |||  || |||| |  ||||||||||||||||||||||||    
T  31401193 gtctagtagcctagtggttagagctcacacagttaattgtggagacgtggggtgtccggggtttgaacctcggctcctgcataaattatgcaatgtccct 31401292  T
Q  548 gtcaattgagttatgcttacggg 570  Q
     |||| |||| || ||| |||||    
T  31401293 atcaactgagctaagctcacggg 31401315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 467 - 573
Target Start/End: Original strand, 49503117 - 49503223
Alignment:
Q  467 ggagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagttatgctta 566  Q
    |||| ||||||||||||||||| |||| |||||||||||| |||| ||   || || |||||||||||||| |||||||||| |||||||| |||||| |    
T  49503117 ggagttcacacatttaaatgtgaagaactggggtgtccggcgttcgaactccggcccctgcataaattatgtaatgtccctgccaattgagctatgctca 49503216  T
Q  567 cggggac 573  Q
    | |||||    
T  49503217 cagggac 49503223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 447 - 557
Target Start/End: Complemental strand, 51137907 - 51137797
Alignment:
Q  447 ggtctagtagtctattggtcggagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccc 546  Q
    ||||||||||  || |||| ||||||| |||||||||||||||||||||||| ||||| |||||| ||   || || ||||||||||||| |||||||||    
T  51137907 ggtctagtagcttagtggttggagctcgcacatttaaatgtggagaagtgggatgtccagagttcgaactccggcccctgcataaattatacaatgtccc 51137808  T
Q  547 tgtcaattgag 557  Q
    |  ||||||||    
T  51137807 taccaattgag 51137797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 468 - 569
Target Start/End: Original strand, 34750359 - 34750458
Alignment:
Q  468 gagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagttatgcttac 567  Q
    ||||||||| ||||||||||| ||||||||||||||| | |||||||  ||| || |||||||||||||||||| |||||  ||||||||||||||| ||    
T  34750359 gagctcacatatttaaatgtg-agaagtggggtgtccagggttcaaacatcggcc-ctgcataaattatgcaatatccctaccaattgagttatgctcac 34750456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 469 - 544
Target Start/End: Original strand, 7000931 - 7001006
Alignment:
Q  469 agctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtc 544  Q
    |||||||||| |||||||||||||||||||||||||||||||| || | || |||||  |||||||||| ||||||    
T  7000931 agctcacacaattaaatgtggagaagtggggtgtccggagttcgaaccccggcctctaaataaattatgtaatgtc 7001006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 468 - 573
Target Start/End: Complemental strand, 26824293 - 26824188
Alignment:
Q  468 gagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagttatgcttac 567  Q
    ||||||||||| ||||||||||||||||  |||| ||||||||| || |||| || |||||||| ||||||||||| |||| ||| |||  || | ||||    
T  26824293 gagctcacacaattaaatgtggagaagtatggtgcccggagttcgaacctcggcccctgcataagttatgcaatgttcctgccaactgacctaagtttac 26824194  T
Q  568 ggggac 573  Q
    ||||||    
T  26824193 ggggac 26824188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 452 - 547
Target Start/End: Complemental strand, 8741592 - 8741496
Alignment:
Q  452 agtagtctattggtcggagctcacacatt-taaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccct 547  Q
    ||||| ||| |||| |||||||||||||| ||||||||||||||||||||||| || |||| || | |  || |||||||||||||| |||||||||    
T  8741592 agtagcctagtggttggagctcacacattataaatgtggagaagtggggtgtcaggggttcgaacccctgcccctgcataaattatgtaatgtccct 8741496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 468 - 560
Target Start/End: Original strand, 34562755 - 34562847
Alignment:
Q  468 gagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagtta 560  Q
    ||||||||||| |||||| |||||||||||||||||||| |||| || |||| || ||| |||||||||| ||| |||||  ||| |||||||    
T  34562755 gagctcacacaattaaatatggagaagtggggtgtccggggttcgaacctcggcccctgtataaattatgtaatatccctaccaactgagtta 34562847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 449 - 545
Target Start/End: Complemental strand, 41927097 - 41927001
Alignment:
Q  449 tctagtagtctattggtcggagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtcc 545  Q
    |||||||| ||| ||||  ||||||||||| ||||||||||||||||  |||||||||  ||| ||||||  || | ||||||||||||||||||||    
T  41927097 tctagtagcctagtggttagagctcacacaattaaatgtggagaagtaaggtgtccgggattcgaatctcagccccagcataaattatgcaatgtcc 41927001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 472 - 548
Target Start/End: Original strand, 45416150 - 45416226
Alignment:
Q  472 tcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctg 548  Q
    ||||||| |||||||||||||||||||||||||||  ||| || | || || |||||||||||||||||||| ||||    
T  45416150 tcacacaattaaatgtggagaagtggggtgtccgggattcgaaccccggcccctgcataaattatgcaatgttcctg 45416226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 468 - 560
Target Start/End: Complemental strand, 50119074 - 50118982
Alignment:
Q  468 gagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagtta 560  Q
    ||||||||||| ||||||||||||||||||||||||||| |||| ||   ||||| ||||||||| |||| | |||||||  ||| |||||||    
T  50119074 gagctcacacaattaaatgtggagaagtggggtgtccggggttcgaactccgacccctgcataaaatatggattgtccctaccaagtgagtta 50118982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 462 - 556
Target Start/End: Original strand, 11249413 - 11249506
Alignment:
Q  462 tggtcggagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattga 556  Q
    |||||||| ||||||||| ||||||   ||||||| ||||| ||| ||| ||| | ||||| |||||||||||||||||||||||| ||||||||    
T  11249413 tggtcggaactcacacatataaatgaa-agaagtgtggtgttcggggtttaaaccccgacccctgcataaattatgcaatgtccctatcaattga 11249506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 451 - 560
Target Start/End: Complemental strand, 17058823 - 17058715
Alignment:
Q  451 tagtagtctattggtcggagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctc-gacctctgcataaattatgcaatgtccctgt 549  Q
    |||||| ||| ||||  ||||||||||| |||| ||||||||||||||||||||||  |||||| ||| |||| || | ||||||||||||||||||| |    
T  17058823 tagtagcctagtggttagagctcacacaattaattgtggagaagtggggtgtccgggattcaaa-ctcagacccct-cttaaattatgcaatgtccctat 17058726  T
Q  550 caattgagtta 560  Q
    ||| |||||||    
T  17058725 caactgagtta 17058715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 469 - 547
Target Start/End: Original strand, 18607778 - 18607856
Alignment:
Q  469 agctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccct 547  Q
    |||||||||| |||||||| |||||||||||||| ||| |||| || | |  || ||||||||||||||||||||||||    
T  18607778 agctcacacaattaaatgtagagaagtggggtgttcggggttcgaaccccagcccctgcataaattatgcaatgtccct 18607856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 467 - 560
Target Start/End: Complemental strand, 42735985 - 42735891
Alignment:
Q  467 ggagctcacacattt-aaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagtta 560  Q
    ||||||||||||||| |||||| ||||||||||||||||||| |||||| |  |||| ||||||| |||||||| | |||||  ||| |||||||    
T  42735985 ggagctcacacattttaaatgtagagaagtggggtgtccggaattcaaacccagacccctgcatatattatgcattttccctaccaaatgagtta 42735891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 469 - 547
Target Start/End: Original strand, 43021591 - 43021669
Alignment:
Q  469 agctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccct 547  Q
    |||||||||  ||||||||||||||||||||||||||  |||| || | ||||| ||||||||| |||||| |||||||    
T  43021591 agctcacacgattaaatgtggagaagtggggtgtccgaggttcgaaccccgacccctgcataaaatatgcattgtccct 43021669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 472 - 545
Target Start/End: Original strand, 19564125 - 19564197
Alignment:
Q  472 tcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtcc 545  Q
    ||||||| ||||||||||||||||||||||||||  |||| || | || || ||||||||||||||||||||||    
T  19564125 tcacacaattaaatgtggagaagtggggtgtccgaggttcgaaccccggcc-ctgcataaattatgcaatgtcc 19564197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 468 - 548
Target Start/End: Original strand, 34557291 - 34557372
Alignment:
Q  468 gagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaa-ttatgcaatgtccctg 548  Q
    |||||||||||||||||||||||||||| ||||||||    ||| || | ||||| ||||||||| ||||||||||||||||    
T  34557291 gagctcacacatttaaatgtggagaagtagggtgtccaagattcgaaccccgacccctgcataaatttatgcaatgtccctg 34557372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 447 - 547
Target Start/End: Complemental strand, 24875094 - 24874994
Alignment:
Q  447 ggtctagtagtctattggtcggagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccc 546  Q
    |||||||||| ||| |||  |||||||||||| |||||| |||||||||||||||||||  |||| || | |  ||  ||||||||||||||||| ||||    
T  24875094 ggtctagtagcctagtggctggagctcacacaattaaatatggagaagtggggtgtccgaggttcgaacccctgcccatgcataaattatgcaatatccc 24874995  T
Q  547 t 547  Q
    |    
T  24874994 t 24874994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 452 - 547
Target Start/End: Original strand, 37662508 - 37662604
Alignment:
Q  452 agtagtctattggtcggagctcacaca-tttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccct 547  Q
    ||||||||| |||| |||||||||||| ||||| ||| |||||||||||||||||| ||||  | | ||||| ||||||| | |||||||| |||||    
T  37662508 agtagtctagtggttggagctcacacaatttaactgtagagaagtggggtgtccggggttcgtaccccgacccctgcatataatatgcaatatccct 37662604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 453 - 547
Target Start/End: Original strand, 2997609 - 2997704
Alignment:
Q  453 gtagtctattggtcggagctcacacattt-aaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccct 547  Q
    ||||||||  |||||||||||||| |||| |||| |||||| |||||||||| || |||| || | |  || ||||||||||||||||||||||||    
T  2997609 gtagtctaggggtcggagctcacatattttaaatatggagatgtggggtgtcaggggttcgaacccctgcccctgcataaattatgcaatgtccct 2997704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 469 - 544
Target Start/End: Original strand, 16997228 - 16997303
Alignment:
Q  469 agctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtc 544  Q
    |||||||||| || |||||||||||||| ||||||||| |||| || |||| || ||||||||| |||||| ||||    
T  16997228 agctcacacaattgaatgtggagaagtgaggtgtccggggttcgaacctcggcccctgcataaaatatgcattgtc 16997303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 453 - 511
Target Start/End: Original strand, 18512527 - 18512586
Alignment:
Q  453 gtagtctattggtcggagctcacacattt-aaatgtggagaagtggggtgtccggagttc 511  Q
    |||||||| |||  ||||||||||||||| ||||||||||||||||||||||||| ||||    
T  18512527 gtagtctagtggctggagctcacacattttaaatgtggagaagtggggtgtccggggttc 18512586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 472 - 547
Target Start/End: Original strand, 24910450 - 24910525
Alignment:
Q  472 tcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccct 547  Q
    ||||||| |||||| ||||||||||| |||||||| |||| || |  |||| |||||||||||||||||| |||||    
T  24910450 tcacacaattaaatatggagaagtggagtgtccggggttcgaaccctgacccctgcataaattatgcaatatccct 24910525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 469 - 560
Target Start/End: Original strand, 27972170 - 27972260
Alignment:
Q  469 agctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagtta 560  Q
    |||||||||| |||||||| || ||||||||| |||||||||| || | || || || ||||||| |||||||||||||  |||||||||||    
T  27972170 agctcacacaattaaatgtagataagtggggtttccggagttcgaagcccggccgctacataaat-atgcaatgtccctaccaattgagtta 27972260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 452 - 511
Target Start/End: Original strand, 36313931 - 36313990
Alignment:
Q  452 agtagtctattggtcggagctcacacatttaaatgtggagaagtggggtgtccggagttc 511  Q
    ||||||||| |||| ||||||||||||||  |||||||||||||||||||| ||| ||||    
T  36313931 agtagtctagtggttggagctcacacattataatgtggagaagtggggtgttcggggttc 36313990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 468 - 546
Target Start/End: Complemental strand, 36860701 - 36860622
Alignment:
Q  468 gagctcacacattt-aaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccc 546  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||  | | || |||||||||| | |||||||| ||||    
T  36860701 gagctcacacattttaaatgtggagaagtggggtgtccggggttcggaccccggcctctgcatataatatgcaatatccc 36860622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 468 - 557
Target Start/End: Original strand, 39670797 - 39670883
Alignment:
Q  468 gagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgag 557  Q
    ||||||||||| ||||||||||||||||||| |||| ||||||| || | | ||| ||||||||   ||||||||| |||||||| ||||    
T  39670797 gagctcacacaattaaatgtggagaagtgggatgtctggagttcgaaccccaacccctgcataa---atgcaatgttcctgtcaactgag 39670883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 452 - 530
Target Start/End: Complemental strand, 50746830 - 50746751
Alignment:
Q  452 agtagtctattggtcggagctcacaca-tttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcata 530  Q
    ||||||||| ||||  |||||| |||| ||||| |||||||||||||||||||||| |||| |||| |||||||| ||||    
T  50746830 agtagtctagtggttagagctcgcacaatttaattgtggagaagtggggtgtccggggttcgaatcccgacctctacata 50746751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 468 - 506
Target Start/End: Complemental strand, 7491863 - 7491825
Alignment:
Q  468 gagctcacacatttaaatgtggagaagtggggtgtccgg 506  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  7491863 gagctcacacaattaaatgtggagaagtggggtgtccgg 7491825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 453 - 514
Target Start/End: Original strand, 22592533 - 22592595
Alignment:
Q  453 gtagtctattggtcggagctcacacat-ttaaatgtggagaagtggggtgtccggagttcaaa 514  Q
    |||||||| ||||  || ||||||||| |||||| ||||||||||||||||||||||||||||    
T  22592533 gtagtctagtggttagaactcacacatattaaatatggagaagtggggtgtccggagttcaaa 22592595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 447 - 548
Target Start/End: Complemental strand, 23234075 - 23233973
Alignment:
Q  447 ggtctagtagtctattggtcggagctcacacatt-taaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtcc 545  Q
    ||||||||||||||  ||   ||||||||||||| ||||||||||||||| ||||||| || |||| || | ||||| ||||||| | |||||||| |||    
T  23234075 ggtctagtagtctagcggctagagctcacacattataaatgtggagaagtagggtgtctggggttcgaaccccgacccctgcatataatatgcaatatcc 23233976  T
Q  546 ctg 548  Q
    |||    
T  23233975 ctg 23233973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 478 - 572
Target Start/End: Original strand, 42490388 - 42490482
Alignment:
Q  478 atttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagttatgcttacgggga 572  Q
    |||||| |||||||||||||||||||||| |||| || | ||||| ||||||| | |||||||| |||||  ||| |||| || ||| |||||||    
T  42490388 atttaattgtggagaagtggggtgtccggggttcgaaccccgacccctgcatataatatgcaatatccctaccaactgagctaagctcacgggga 42490482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 468 - 572
Target Start/End: Original strand, 6130000 - 6130105
Alignment:
Q  468 gagctcacaca-tttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagttatgctta 566  Q
    ||||||||||| ||||| ||||||||||||| ||||||||||||| || | ||||  ||||||| | |||||||| |||||  ||| |||| || ||| |    
T  6130000 gagctcacacaatttaattgtggagaagtggagtgtccggagttcgaaccccgactcctgcatataatatgcaatatccctaccaactgagctacgctca 6130099  T
Q  567 cgggga 572  Q
    ||||||    
T  6130100 cgggga 6130105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 468 - 572
Target Start/End: Original strand, 12502221 - 12502326
Alignment:
Q  468 gagctcacaca-tttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagttatgctta 566  Q
    ||||||||||| ||||| ||||||||||||| ||||||||  ||| || | ||||  ||||||| | |||||||| |||||  ||| |||| ||||||||    
T  12502221 gagctcacacaatttaattgtggagaagtggagtgtccgggtttcgaaccccgactcctgcatataatatgcaatatccctaccaactgagctatgctta 12502320  T
Q  567 cgggga 572  Q
    ||||||    
T  12502321 cgggga 12502326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 467 - 539
Target Start/End: Complemental strand, 12613281 - 12613208
Alignment:
Q  467 ggagctcacacattt-aaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgca 539  Q
    ||||||||||||||| |||||| |||||||||||||||||| |||| | ||||| || ||| ||| ||||||||    
T  12613281 ggagctcacacattttaaatgtagagaagtggggtgtccggggttcgattctcggcccctgtatatattatgca 12613208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 468 - 572
Target Start/End: Complemental strand, 21265759 - 21265654
Alignment:
Q  468 gagctcacaca-tttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagttatgctta 566  Q
    ||||||||||| ||||| |||||||||||||||||||||| |||| || | || || ||||||| | |||||||| |||||  ||| |||| || ||| |    
T  21265759 gagctcacacaatttaattgtggagaagtggggtgtccggggttcgaaccccggcccctgcatataatatgcaatatccctaccaactgagctaagctca 21265660  T
Q  567 cgggga 572  Q
    ||||||    
T  21265659 cgggga 21265654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 468 - 505
Target Start/End: Original strand, 27178676 - 27178713
Alignment:
Q  468 gagctcacacatttaaatgtggagaagtggggtgtccg 505  Q
    |||||||||||||| |||||||||||||||||||||||    
T  27178676 gagctcacacattttaatgtggagaagtggggtgtccg 27178713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 492 - 576
Target Start/End: Complemental strand, 29491545 - 29491460
Alignment:
Q  492 aagtggggtgtccggagttcaaatctcgacctctgcata-aattatgcaatgtccctgtcaattgagttatgcttacggggacaga 576  Q
    ||||||||||||||| |||| || | ||||| ||||||| ||| ||||| |||||||| ||| |||| |||||| |||||||||||    
T  29491545 aagtggggtgtccggggttcgaaccccgacccctgcatataataatgcattgtccctgccaactgagctatgctcacggggacaga 29491460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 468 - 560
Target Start/End: Complemental strand, 621679 - 621587
Alignment:
Q  468 gagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagtta 560  Q
    |||||||||||||||||| ||||||| || | |||  || |||| || | ||||| ||||||||| |||||||| ||||| |||| |||||||    
T  621679 gagctcacacatttaaatatggagaaatgtgatgtttggggttcgaaccccgacccctgcataaaatatgcaatatccctatcaactgagtta 621587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 485 - 557
Target Start/End: Original strand, 5190766 - 5190838
Alignment:
Q  485 tgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgag 557  Q
    |||||||||||||||||||||| |||| || ||||||| ||||||| | ||||| || |||||  ||||||||    
T  5190766 tgtggagaagtggggtgtccggggttcgaacctcgacccctgcatataatatgcgatatccctaccaattgag 5190838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 468 - 511
Target Start/End: Original strand, 12650351 - 12650395
Alignment:
Q  468 gagctcacaca-tttaaatgtggagaagtggggtgtccggagttc 511  Q
    ||||||||||| ||||| |||||||||||||||||||||||||||    
T  12650351 gagctcacacaatttaattgtggagaagtggggtgtccggagttc 12650395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 485 - 557
Target Start/End: Complemental strand, 44546106 - 44546034
Alignment:
Q  485 tgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgag 557  Q
    |||||||||||||||||||| |||||| || |  || | ||||||||||||| ||||||||||  ||||||||    
T  44546106 tgtggagaagtggggtgtccagagttcgaaccgtgatccctgcataaattatacaatgtccctaccaattgag 44546034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 471 - 547
Target Start/End: Complemental strand, 51034063 - 51033987
Alignment:
Q  471 ctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccct 547  Q
    |||||||| ||||||||||||||||| | |||||| | ||| ||  |||||  |||||||||||||| |||||||||    
T  51034063 ctcacacaattaaatgtggagaagtgagatgtccgaatttcgaacttcgactcctgcataaattatgtaatgtccct 51033987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 448 - 543
Target Start/End: Complemental strand, 17111360 - 17111265
Alignment:
Q  448 gtctagtagtctattggtcggagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgt 543  Q
    |||||||| |||| |||  |||||| ||||| ||||| || |||||||||||| | ||| |||| ||  |||||| ||| ||||||||||||||||    
T  17111360 gtctagtaatctaatggctggagcttacacaattaaacgtagagaagtggggtcttcggggttccaacttcgacccctgtataaattatgcaatgt 17111265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 467 - 534
Target Start/End: Complemental strand, 17487629 - 17487562
Alignment:
Q  467 ggagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaatt 534  Q
    ||||||||||||| ||||  |||||||||||||||||||| |||  || | ||||| |||||||||||    
T  17487629 ggagctcacacatataaaaatggagaagtggggtgtccggggtttgaagcccgacccctgcataaatt 17487562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 492 - 574
Target Start/End: Complemental strand, 39238791 - 39238708
Alignment:
Q  492 aagtggggtgtccggagttcaaatctcgacctctgcata-aattatgcaatgtccctgtcaattgagttatgcttacggggaca 574  Q
    ||||||||||||||| |||| || |||| || ||||||| ||| ||||| |||||||| ||| |||| |||||| |||||||||    
T  39238791 aagtggggtgtccggggttcgaacctcggcccctgcatataataatgcattgtccctgccaactgagctatgctcacggggaca 39238708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 471 - 513
Target Start/End: Complemental strand, 4281480 - 4281439
Alignment:
Q  471 ctcacacatttaaatgtggagaagtggggtgtccggagttcaa 513  Q
    ||||||||||||||||||||||||| |||||||||| ||||||    
T  4281480 ctcacacatttaaatgtggagaagt-gggtgtccggggttcaa 4281439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 471 - 572
Target Start/End: Complemental strand, 8865954 - 8865852
Alignment:
Q  471 ctcacacatttaaat-gtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagttatgcttacgg 569  Q
    |||||||| |||||| |||||||||||| |||||| | |||| |||| ||||| ||||||| | |||||||| |||||  ||| |||| || ||| ||||    
T  8865954 ctcacacaattaaattgtggagaagtggagtgtccagggttcgaatcccgacccctgcatataatatgcaatatccctaccaactgagctaagctcacgg 8865855  T
Q  570 gga 572  Q
    |||    
T  8865854 gga 8865852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 472 - 506
Target Start/End: Complemental strand, 13153009 - 13152975
Alignment:
Q  472 tcacacatttaaatgtggagaagtggggtgtccgg 506  Q
    ||||||||||||||||||||||||| |||||||||    
T  13153009 tcacacatttaaatgtggagaagtgaggtgtccgg 13152975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 448 - 506
Target Start/End: Original strand, 28503477 - 28503535
Alignment:
Q  448 gtctagtagtctattggtcggagctcacacatttaaatgtggagaagtggggtgtccgg 506  Q
    ||||||||||||| ||||   ||||||||||||| |||||| |||||| ||||||||||    
T  28503477 gtctagtagtctagtggttaaagctcacacattttaatgtgaagaagtagggtgtccgg 28503535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 469 - 511
Target Start/End: Complemental strand, 35068788 - 35068746
Alignment:
Q  469 agctcacacatttaaatgtggagaagtggggtgtccggagttc 511  Q
    ||||||||||||  |||||||||||||||||||||||| ||||    
T  35068788 agctcacacattctaatgtggagaagtggggtgtccggggttc 35068746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 478 - 572
Target Start/End: Complemental strand, 44732725 - 44732631
Alignment:
Q  478 atttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagttatgcttacgggga 572  Q
    |||||| |||||||||||||||||||||| |||| || | || ||  |||||| | |||||||| |||||  ||| ||||||| ||| |||||||    
T  44732725 atttaattgtggagaagtggggtgtccggggttcgaaccccggcccttgcatataatatgcaatatccctaccaactgagttaagctcacgggga 44732631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 479 - 540
Target Start/End: Original strand, 993532 - 993593
Alignment:
Q  479 tttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaa 540  Q
    ||||||| | ||||||||| |||||||||||||||| |||  |||| ||||| |||||||||    
T  993532 tttaaatatagagaagtggagtgtccggagttcaaacctcagcctccgcatatattatgcaa 993593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 483 - 536
Target Start/End: Original strand, 10052454 - 10052507
Alignment:
Q  483 aatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattat 536  Q
    |||||||||||||||||||||||| |||| || |||| || ||||||| |||||    
T  10052454 aatgtggagaagtggggtgtccggggttcgaacctcggcccctgcatatattat 10052507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 447 - 547
Target Start/End: Complemental strand, 15595849 - 15595748
Alignment:
Q  447 ggtctagtagtctattggtcggagctcacacattt-aaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtcc 545  Q
    |||||||||| ||| ||  ||||| | |||||||| |||||||||||||| || ||| ||| || ||||||  ||||  |||||| ||||||||||||||    
T  15595849 ggtctagtagcctagtgaccggagattacacattttaaatgtggagaagttggttgttcggggtccaaatcctgacccttgcatatattatgcaatgtcc 15595750  T
Q  546 ct 547  Q
    ||    
T  15595749 ct 15595748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 448 - 505
Target Start/End: Complemental strand, 16661375 - 16661318
Alignment:
Q  448 gtctagtagtctattggtcggagctcacacatttaaatgtggagaagtggggtgtccg 505  Q
    ||||||||| ||||||||  ||||  ||||| |||||||||||||||||| |||||||    
T  16661375 gtctagtagcctattggttagagcatacacaattaaatgtggagaagtggagtgtccg 16661318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 467 - 511
Target Start/End: Complemental strand, 18911955 - 18911910
Alignment:
Q  467 ggagctcacacattt-aaatgtggagaagtggggtgtccggagttc 511  Q
    ||||||||||||||| |||||||||| |||||||||||||| ||||    
T  18911955 ggagctcacacattttaaatgtggaggagtggggtgtccggggttc 18911910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 468 - 572
Target Start/End: Complemental strand, 22563489 - 22563384
Alignment:
Q  468 gagctcacacatttaaat-gtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagttatgctta 566  Q
    ||||||||||| |||||| |||||||||||| |||||||| |||| || | || || ||||||| | |||||||| |||||  ||| |||| || ||| |    
T  22563489 gagctcacacaattaaattgtggagaagtggagtgtccggggttcgaaccccggcccctgcatataatatgcaatatccctaccaactgagctaagctca 22563390  T
Q  567 cgggga 572  Q
    ||||||    
T  22563389 cgggga 22563384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 468 - 572
Target Start/End: Complemental strand, 32594354 - 32594249
Alignment:
Q  468 gagctcacaca-tttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagttatgctta 566  Q
    ||||||||||| ||||| ||||||||||||| |||||||| |||| || | ||||  ||||||| | |||||||| |||||  ||| |||| || ||| |    
T  32594354 gagctcacacaatttaattgtggagaagtggagtgtccggggttcgaaccccgactcctgcatataatatgcaatatccctaccaactgagctaagctca 32594255  T
Q  567 cgggga 572  Q
    ||||||    
T  32594254 cgggga 32594249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 479 - 560
Target Start/End: Original strand, 33229656 - 33229736
Alignment:
Q  479 tttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagtta 560  Q
    |||||||||||||||||||||||| |||||||  ||| | | |||||||||| |||||||| ||| |||  ||| |||||||    
T  33229656 tttaaatgtggagaagtggggtgttcggagtttgaatat-ggcctctgcatatattatgcattgttcctaccaactgagtta 33229736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 468 - 572
Target Start/End: Complemental strand, 33254831 - 33254726
Alignment:
Q  468 gagctcacaca-tttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagttatgctta 566  Q
    ||||||||||| ||||| ||||||||||||| |||||||| |||| || | ||||  ||||||| | |||||||| |||||  ||| |||| || ||| |    
T  33254831 gagctcacacaatttaattgtggagaagtggagtgtccggggttccaaccccgactcctgcatataatatgcaatatccctaccaactgagctaagctca 33254732  T
Q  567 cgggga 572  Q
    ||||||    
T  33254731 cgggga 33254726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 468 - 572
Target Start/End: Complemental strand, 33275003 - 33274898
Alignment:
Q  468 gagctcacaca-tttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagttatgctta 566  Q
    ||||||||||| ||||| ||||||||||||| |||||||| |||| || | ||||  ||||||| | |||||||| |||||  ||| |||| || ||| |    
T  33275003 gagctcacacaatttaattgtggagaagtggagtgtccggggttccaaccccgactcctgcatataatatgcaatatccctaccaactgagctaagctca 33274904  T
Q  567 cgggga 572  Q
    ||||||    
T  33274903 cgggga 33274898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 466 - 514
Target Start/End: Original strand, 34459520 - 34459569
Alignment:
Q  466 cggagctcacacattt-aaatgtggagaagtggggtgtccggagttcaaa 514  Q
    |||||||||||||||| ||||||| | |||||| ||||||||||||||||    
T  34459520 cggagctcacacattttaaatgtgaaaaagtggagtgtccggagttcaaa 34459569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 468 - 560
Target Start/End: Complemental strand, 51942397 - 51942305
Alignment:
Q  468 gagctcacacatttaaat-gtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagtta 560  Q
    ||||||||||| |||||| ||||||||||||||||||||| |||| || | ||||| ||| ||| | |||||||| |||||  ||| |||||||    
T  51942397 gagctcacacaattaaattgtggagaagtggggtgtccggggttcgaaccccgacc-ctgtatataatatgcaatatccctaccaactgagtta 51942305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 480 - 557
Target Start/End: Original strand, 52426893 - 52426970
Alignment:
Q  480 ttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgag 557  Q
    |||||||||||||| ||||||||| ||||||| || | || || ||||||| | |||||||| ||||| |||| ||||    
T  52426893 ttaaatgtggagaaatggggtgtctggagttcgaaccacggcccctgcatataatatgcaatatccctatcaactgag 52426970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 468 - 511
Target Start/End: Original strand, 7180581 - 7180625
Alignment:
Q  468 gagctcacaca-tttaaatgtggagaagtggggtgtccggagttc 511  Q
    ||||||||||| ||||| |||||||||||||||||||||| ||||    
T  7180581 gagctcacacaatttaattgtggagaagtggggtgtccggggttc 7180625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 452 - 511
Target Start/End: Complemental strand, 12404474 - 12404414
Alignment:
Q  452 agtagtctattggtcggagctcacaca-tttaaatgtggagaagtggggtgtccggagttc 511  Q
    ||||||||| ||||| ||||||| ||| ||||| |||||||||||||||||| ||| ||||    
T  12404474 agtagtctaatggtcagagctcatacaatttaattgtggagaagtggggtgttcggggttc 12404414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 468 - 572
Target Start/End: Original strand, 23933036 - 23933140
Alignment:
Q  468 gagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagttatgcttac 567  Q
    ||||||||| | |||| ||| |||||||||||||| || ||||| || | ||||| ||  ||||||||| ||||||||||  ||| |||| || ||| ||    
T  23933036 gagctcacataattaattgtagagaagtggggtgttcgaagttcgaaccccgacccctagataaattatacaatgtccctaccaactgagctaagctcac 23933135  T
Q  568 gggga 572  Q
    |||||    
T  23933136 gggga 23933140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 471 - 511
Target Start/End: Complemental strand, 24499824 - 24499784
Alignment:
Q  471 ctcacacatttaaatgtggagaagtggggtgtccggagttc 511  Q
    |||||||| |||||||||||||||| |||||||||| ||||    
T  24499824 ctcacacaattaaatgtggagaagtagggtgtccggggttc 24499784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 478 - 530
Target Start/End: Original strand, 26820638 - 26820690
Alignment:
Q  478 atttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcata 530  Q
    |||||| ||||||||| |||||||||||| ||| ||||| ||||| |||||||    
T  26820638 atttaattgtggagaaatggggtgtccggggtttaaatcccgacccctgcata 26820690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 468 - 547
Target Start/End: Complemental strand, 34058317 - 34058237
Alignment:
Q  468 gagctcacaca-tttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccct 547  Q
    ||||||||||| ||||| ||||||||||||| |||||||| |||| || |||| |  ||||||| | |||||||| |||||    
T  34058317 gagctcacacaatttaattgtggagaagtggagtgtccggggttcgaacctcggctcctgcatataatatgcaatatccct 34058237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 493 - 545
Target Start/End: Complemental strand, 40051538 - 40051486
Alignment:
Q  493 agtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtcc 545  Q
    |||||| ||||||| |||| |||| |||||  |||||||||||||||||||||    
T  40051538 agtgggatgtccggggttcgaatcccgacccttgcataaattatgcaatgtcc 40051486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 56; Significance: 7e-23; HSPs: 55)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 449 - 544
Target Start/End: Complemental strand, 3596371 - 3596276
Alignment:
Q  449 tctagtagtctattggtcggagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtc 544  Q
    ||||||||| || |||  |||||||||||| ||||||||||||||||||||||||||| |||| || | ||||| |||||||||||||||||||||    
T  3596371 tctagtagtgtagtggctggagctcacacaattaaatgtggagaagtggggtgtccggggttcgaaccccgacccctgcataaattatgcaatgtc 3596276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 467 - 560
Target Start/End: Complemental strand, 15939393 - 15939299
Alignment:
Q  467 ggagctcacacattt-aaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagtta 560  Q
    ||||||||||||||| ||||||||||||||||||||| ||| |||| || |   ||||||||||| ||||||||||||| ||| |||||||||||    
T  15939393 ggagctcacacattttaaatgtggagaagtggggtgttcggggttcgaaccctaacctctgcatatattatgcaatgtctctgccaattgagtta 15939299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 468 - 574
Target Start/End: Complemental strand, 20919712 - 20919606
Alignment:
Q  468 gagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagttatgcttac 567  Q
    ||||||||| | ||||||||||||||||||||||||||| |||| || | || || | ||||||||||||||||||||||  ||| |||| || ||| ||    
T  20919712 gagctcacataattaaatgtggagaagtggggtgtccggggttcgaaccccggccccagcataaattatgcaatgtccctaccaactgagctaagctcac 20919613  T
Q  568 ggggaca 574  Q
    |||||||    
T  20919612 ggggaca 20919606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 469 - 554
Target Start/End: Complemental strand, 1964454 - 1964369
Alignment:
Q  469 agctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaatt 554  Q
    |||||||||| |||||| |||||||||||||||||||| |||  || | || || ||||||||||||||||||||||||| |||||    
T  1964454 agctcacacaattaaatatggagaagtggggtgtccggggtttgaaccccggcccctgcataaattatgcaatgtccctgccaatt 1964369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 467 - 547
Target Start/End: Original strand, 2145701 - 2145782
Alignment:
Q  467 ggagctcacacatt-taaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccct 547  Q
    ||||||||||| || ||||||||||||||||||||||| ||  |||||| |||  || ||||||||||||||||||||||||    
T  2145701 ggagctcacacgttataaatgtggagaagtggggtgtcagggattcaaacctctgcccctgcataaattatgcaatgtccct 2145782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 472 - 545
Target Start/End: Complemental strand, 44558100 - 44558027
Alignment:
Q  472 tcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtcc 545  Q
    ||||||| ||||||||||||||||||||||||||| |||| || | |  || ||||||||||||||||||||||    
T  44558100 tcacacaattaaatgtggagaagtggggtgtccggggttcgaaccccagcccctgcataaattatgcaatgtcc 44558027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 468 - 557
Target Start/End: Original strand, 44666311 - 44666400
Alignment:
Q  468 gagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgag 557  Q
    ||||||||||| |||| |||||||||||||  ||||||| |||| || | ||| | ||||||| |||||||||| |||||||||||||||    
T  44666311 gagctcacacaattaattgtggagaagtggaatgtccggggttcgaaccccgatccctgcatatattatgcaatatccctgtcaattgag 44666400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 468 - 560
Target Start/End: Original strand, 37352461 - 37352553
Alignment:
Q  468 gagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagtta 560  Q
    |||||||||||| ||||||||||||| |||||||| |||||||||||  ||| || ||||||| | |||||||| |||||  ||| |||||||    
T  37352461 gagctcacacatataaatgtggagaaatggggtgttcggagttcaaacttcggcccctgcatataatatgcaatatccctaccaactgagtta 37352553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 468 - 511
Target Start/End: Complemental strand, 4659510 - 4659467
Alignment:
Q  468 gagctcacacatttaaatgtggagaagtggggtgtccggagttc 511  Q
    |||||||||||| |||||||||||||||||||||||||||||||    
T  4659510 gagctcacacatataaatgtggagaagtggggtgtccggagttc 4659467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 471 - 541
Target Start/End: Original strand, 13242702 - 13242772
Alignment:
Q  471 ctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaat 541  Q
    |||||||| ||||||||||||||||| ||||||||  |||| || | ||||| ||||||||||||||||||    
T  13242702 ctcacacaattaaatgtggagaagtgaggtgtccgaggttcgaaccccgacccctgcataaattatgcaat 13242772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 467 - 560
Target Start/End: Original strand, 3439329 - 3439421
Alignment:
Q  467 ggagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagtta 560  Q
    |||||||| | | ||||||||||||||| ||||||||||||||||||| || |||| ||||||||| ||||||  ||  || ||||||||||||    
T  3439329 ggagctcatataattaaatgtggagaagcggggtgtccggagttcaaacct-gacccctgcataaaatatgcatcgtttctatcaattgagtta 3439421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 471 - 572
Target Start/End: Original strand, 7379571 - 7379672
Alignment:
Q  471 ctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagttatgcttacggg 570  Q
    ||||||||| ||||||||||||| |||||||| |||| ||| || | ||||||||||||| | |||||||| ||| |  ||| ||||||| ||| |||||    
T  7379571 ctcacacatataaatgtggagaaatggggtgttcggaattcgaaccccgacctctgcatataatatgcaatatccttaccaactgagttaagctcacggg 7379670  T
Q  571 ga 572  Q
    ||    
T  7379671 ga 7379672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 454 - 530
Target Start/End: Original strand, 7717558 - 7717635
Alignment:
Q  454 tagtctattggtcggagctcacacattt-aaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcata 530  Q
    ||||||| ||| |||||||||||||||| |||||||||||||||| ||||||| ||||| || | ||||| |||||||    
T  7717558 tagtctagtggccggagctcacacattttaaatgtggagaagtggagtgtccgaagttcgaaccccgacccctgcata 7717635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 471 - 547
Target Start/End: Complemental strand, 2132815 - 2132739
Alignment:
Q  471 ctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccct 547  Q
    ||||||||| |||||||||||||| ||||||| |||| ||| ||  ||| |  ||||||||||||||||||||||||    
T  2132815 ctcacacatataaatgtggagaagcggggtgttcggaattcgaacttcggctcctgcataaattatgcaatgtccct 2132739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 472 - 572
Target Start/End: Complemental strand, 3446828 - 3446728
Alignment:
Q  472 tcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagttatgcttacgggg 571  Q
    |||||||| |||||||||||||||||||||||||| |||| || |||| |  ||||||| | |||||||| |||||  ||| |||| || ||| ||||||    
T  3446828 tcacacatataaatgtggagaagtggggtgtccggggttcgaacctcggctcctgcatataatatgcaatatccctaccaactgagctaagctcacgggg 3446729  T
Q  572 a 572  Q
    |    
T  3446728 a 3446728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 448 - 547
Target Start/End: Complemental strand, 28819595 - 28819495
Alignment:
Q  448 gtctagtagtctattggtcggagctcacacatttaaatgtggagaagt-ggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccc 546  Q
    ||||||||| ||| |||| | |||| ||||| |||||||||||||||| |||||||||   |||| || ||| ||| |||||||||||||||||| ||||    
T  28819595 gtctagtagcctagtggttgtagcttacacaattaaatgtggagaagtgggggtgtccatggttcgaacctcaacccctgcataaattatgcaatatccc 28819496  T
Q  547 t 547  Q
    |    
T  28819495 t 28819495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 468 - 511
Target Start/End: Original strand, 44898449 - 44898493
Alignment:
Q  468 gagctcacacattt-aaatgtggagaagtggggtgtccggagttc 511  Q
    |||||||||||||| ||||||||||||||||||||||||||||||    
T  44898449 gagctcacacattttaaatgtggagaagtggggtgtccggagttc 44898493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 468 - 511
Target Start/End: Complemental strand, 4878311 - 4878268
Alignment:
Q  468 gagctcacacatttaaatgtggagaagtggggtgtccggagttc 511  Q
    |||||||||||| |||||||||||||||||||||||||| ||||    
T  4878311 gagctcacacatataaatgtggagaagtggggtgtccggggttc 4878268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 468 - 547
Target Start/End: Original strand, 32189970 - 32190049
Alignment:
Q  468 gagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccct 547  Q
    ||||||||||| |||| ||| || ||||| ||||||||| |||| || | || || ||||||||||||||||||||||||    
T  32189970 gagctcacacaattaattgtagaaaagtgaggtgtccggggttcgaaccccggcccctgcataaattatgcaatgtccct 32190049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 452 - 547
Target Start/End: Complemental strand, 44920132 - 44920038
Alignment:
Q  452 agtagtctattggtcggagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccct 547  Q
    ||||||||| ||||  ||||| ||| | |||||| || ||||||||||||||||  |||| || ||| ||| ||||||||||||||||||||||||    
T  44920132 agtagtctagtggttagagctaacataattaaatatgtagaagtggggtgtccgatgttcgaacctcaacc-ctgcataaattatgcaatgtccct 44920038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 448 - 573
Target Start/End: Complemental strand, 17524960 - 17524836
Alignment:
Q  448 gtctagtagtctattggtcggagctcacacatttaaatgtggagaagtggggtgtccggagttc-aaatctcgacctctgcataaattatgcaatgtccc 546  Q
    ||||||||| ||| |||  |||||||||||||||||||||||||||||  || ||| |  |||| || ||| | |||||| |||||||||||||||||||    
T  17524960 gtctagtagcctagtggctggagctcacacatttaaatgtggagaagt-aggcgtctgaggttcgaactct-ggcctctgtataaattatgcaatgtccc 17524863  T
Q  547 tgtcaattgagttatgcttacggggac 573  Q
    |  |||||||| |||||| | ||||||    
T  17524862 tcccaattgagctatgctcatggggac 17524836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 467 - 560
Target Start/End: Complemental strand, 36748990 - 36748897
Alignment:
Q  467 ggagctcacacattt-aaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagtta 560  Q
    ||||||||||||||| |||||||||||||||| |||| || ||||| || | ||||| |||||| || ||||||||||||||  ||| |||||||    
T  36748990 ggagctcacacattttaaatgtggagaagtggagtgttcgaagttcgaaccccgacccctgcattaa-tatgcaatgtccctaccaactgagtta 36748897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 475 - 573
Target Start/End: Complemental strand, 41246481 - 41246383
Alignment:
Q  475 cacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagttatgcttacggggac 573  Q
    |||| |||||||| |||||||||||||||||| |||| || | || ||  | |||||| ||| ||||||||||||||| |||| || ||| ||||||||    
T  41246481 cacaattaaatgtagagaagtggggtgtccggggttcgaaccccggcccttacataaactatacaatgtccctgtcaactgagctaagctcacggggac 41246383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 468 - 572
Target Start/End: Complemental strand, 1844920 - 1844815
Alignment:
Q  468 gagctcacaca-tttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagttatgctta 566  Q
    ||||||||||| ||||| |||||||||||||||||||||  |||| || | || || ||||||| | |||||||| |||||  ||| |||| || |||||    
T  1844920 gagctcacacaatttaattgtggagaagtggggtgtccgaggttcgaaccccggcccctgcatataatatgcaatatccctaccaactgagctaagctta 1844821  T
Q  567 cgggga 572  Q
    ||||||    
T  1844820 cgggga 1844815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 481 - 534
Target Start/End: Original strand, 11949977 - 11950030
Alignment:
Q  481 taaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaatt 534  Q
    |||||||||||||||||||||||||| |||| || |||| || |||||||||||    
T  11949977 taaatgtggagaagtggggtgtccggggttcgaacctcgtcccctgcataaatt 11950030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 467 - 504
Target Start/End: Complemental strand, 22333878 - 22333841
Alignment:
Q  467 ggagctcacacatttaaatgtggagaagtggggtgtcc 504  Q
    |||||||||||| |||||||||||||||||||||||||    
T  22333878 ggagctcacacaattaaatgtggagaagtggggtgtcc 22333841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 462 - 530
Target Start/End: Complemental strand, 27359733 - 27359665
Alignment:
Q  462 tggtcggagctcacaca-tttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcata 530  Q
    |||| |||||||||||| ||||| |||||| |||||| ||||||| |||||||||||| |||||||||||    
T  27359733 tggttggagctcacacaatttaattgtggataagtggagtgtccg-agttcaaatctcaacctctgcata 27359665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 468 - 572
Target Start/End: Original strand, 33228900 - 33229005
Alignment:
Q  468 gagctcacaca-tttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagttatgctta 566  Q
    ||||||||||| ||||| |||||||||||||||||||||| |||| || | || || ||||||| | |||||||| |||||  ||| |||| || ||| |    
T  33228900 gagctcacacaatttaattgtggagaagtggggtgtccggggttcgaaccccggcccctgcatataatatgcaatatccctaccaactgagctaagctca 33228999  T
Q  567 cgggga 572  Q
    ||||||    
T  33229000 cgggga 33229005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 467 - 530
Target Start/End: Complemental strand, 5947970 - 5947906
Alignment:
Q  467 ggagctcacacattt-aaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcata 530  Q
    ||||||||||||||| |||||||||| |||||||||||||| |||| || | ||||| |||||||    
T  5947970 ggagctcacacattttaaatgtggaggagtggggtgtccggggttcgaaccccgacccctgcata 5947906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 467 - 506
Target Start/End: Original strand, 20497161 - 20497201
Alignment:
Q  467 ggagctcacacattt-aaatgtggagaagtggggtgtccgg 506  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  20497161 ggagctcacacattttaaatgtggagaagtggggtgtccgg 20497201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 467 - 547
Target Start/End: Original strand, 23919444 - 23919524
Alignment:
Q  467 ggagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccct 547  Q
    |||| ||||||| |||||||||||||| ||||||||| ||  ||| || | ||||| || |||| ||||||||||||||||    
T  23919444 ggagttcacacaattaaatgtggagaaatggggtgtctgggattcgaaccccgacccctccatatattatgcaatgtccct 23919524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 452 - 543
Target Start/End: Complemental strand, 39635419 - 39635327
Alignment:
Q  452 agtagtctattggtcggagctcacacattt-aaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgt 543  Q
    ||||||||| |||  |||| |||||||||| |||||||||||||||| ||||| ||||||| || | ||||| |  |||| ||||||||||||    
T  39635419 agtagtctagtggctggagatcacacattttaaatgtggagaagtggagtgtctggagttcgaaccccgaccccaacatatattatgcaatgt 39635327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 468 - 547
Target Start/End: Original strand, 3287024 - 3287103
Alignment:
Q  468 gagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccct 547  Q
    ||||||||||| |||||||||||||||||| || ||||| |||| || | || || ||||||| | |||||||| |||||    
T  3287024 gagctcacacaattaaatgtggagaagtggagtatccggggttcgaaccccggcccctgcatataatatgcaatatccct 3287103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 447 - 557
Target Start/End: Complemental strand, 5613078 - 5612967
Alignment:
Q  447 ggtctagtagtctattggtcggagctcacacatttaaat-gtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtcc 545  Q
    |||| ||||| ||| ||||  ||||||||||| |||||| ||||||||||||||||||||| |||| || | || ||  |||||| | |||||||| |||    
T  5613078 ggtcaagtagcctagtggttagagctcacacaattaaattgtggagaagtggggtgtccggggttcgaaccccggcccttgcatataatatgcaatatcc 5612979  T
Q  546 ctgtcaattgag 557  Q
    ||| ||| ||||    
T  5612978 ctgccaactgag 5612967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 468 - 514
Target Start/End: Complemental strand, 16040344 - 16040297
Alignment:
Q  468 gagctcacaca-tttaaatgtggagaagtggggtgtccggagttcaaa 514  Q
    ||||||||||| ||||| |||||||||||||| |||||||||||||||    
T  16040344 gagctcacacaatttaattgtggagaagtgggatgtccggagttcaaa 16040297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 479 - 530
Target Start/End: Original strand, 17777142 - 17777193
Alignment:
Q  479 tttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcata 530  Q
    |||||||||||||||||||||||||||| |||| || | ||||| |||||||    
T  17777142 tttaaatgtggagaagtggggtgtccggggttcgaaccccgacccctgcata 17777193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 462 - 511
Target Start/End: Complemental strand, 18254698 - 18254648
Alignment:
Q  462 tggtcggagctcacacattt-aaatgtggagaagtggggtgtccggagttc 511  Q
    |||| ||||||||||||||| ||||||| |||||||||||||| |||||||    
T  18254698 tggttggagctcacacattttaaatgtgaagaagtggggtgtctggagttc 18254648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 470 - 572
Target Start/End: Original strand, 24581434 - 24581536
Alignment:
Q  470 gctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagttatgcttacgg 569  Q
    ||||||||| |||| |||||||||||| ||||| |||  | | || | |  || ||||||| |||||||||| |||||| ||| ||||||| ||||||||    
T  24581434 gctcacacaattaattgtggagaagtgaggtgttcgggatacgaaccccagcccctgcatatattatgcaatatccctgccaactgagttaagcttacgg 24581533  T
Q  570 gga 572  Q
    |||    
T  24581534 gga 24581536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 468 - 502
Target Start/End: Complemental strand, 27444361 - 27444327
Alignment:
Q  468 gagctcacacatttaaatgtggagaagtggggtgt 502  Q
    ||||||||||||||||||||| |||||||||||||    
T  27444361 gagctcacacatttaaatgtgaagaagtggggtgt 27444327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 447 - 572
Target Start/End: Complemental strand, 36005566 - 36005440
Alignment:
Q  447 ggtctagtagtctattggtcggagctcacaca-tttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtcc 545  Q
    |||| ||||| |||||||   ||||||||||| ||||| ||||||||||||| ||||| || |||| || | || |  ||||||| | |||||||| |||    
T  36005566 ggtcaagtagcctattggctagagctcacacaatttaattgtggagaagtggagtgtctggggttcgaaccccggctcctgcatataatatgcaatatcc 36005467  T
Q  546 ctgtcaattgagttatgcttacgggga 572  Q
    ||  ||||||||||| ||| |||||||    
T  36005466 ctaccaattgagttacgctcacgggga 36005440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 468 - 572
Target Start/End: Complemental strand, 2643800 - 2643695
Alignment:
Q  468 gagctcacaca-tttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagttatgctta 566  Q
    ||||||||||| ||||| ||||||||||||| |||||||| |||| || | || |  ||||||| | |||||||| |||||  ||| |||| |||||| |    
T  2643800 gagctcacacaatttaattgtggagaagtggagtgtccggggttcgaaccccggctcctgcatataatatgcaatatccctaccaactgagctatgctca 2643701  T
Q  567 cgggga 572  Q
    ||||||    
T  2643700 cgggga 2643695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 472 - 545
Target Start/End: Complemental strand, 3154095 - 3154022
Alignment:
Q  472 tcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtcc 545  Q
    ||||||| ||||||| |||||||||| |||||| | |||| || | ||  | ||||||||||||||||||||||    
T  3154095 tcacacaattaaatgaggagaagtggagtgtccagggttcgaaccccggtccctgcataaattatgcaatgtcc 3154022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 468 - 572
Target Start/End: Complemental strand, 3439051 - 3438946
Alignment:
Q  468 gagctcacaca-tttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagttatgctta 566  Q
    ||||||||||| ||||| ||||||||||||| |||||||| |||| || | ||||  ||||||| | |||||||| |||||  ||| |||| || ||| |    
T  3439051 gagctcacacaatttaattgtggagaagtggagtgtccggggttcgaaccccgactcctgcatataatatgcaatatccctaccaactgagctacgctca 3438952  T
Q  567 cgggga 572  Q
    ||||||    
T  3438951 cgggga 3438946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 492 - 573
Target Start/End: Complemental strand, 23405274 - 23405193
Alignment:
Q  492 aagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagttatgcttacggggac 573  Q
    ||||||||||||| | |||| || | ||||| ||||||| ||||||||||||||||  ||| |||| || ||| ||||||||    
T  23405274 aagtggggtgtccagggttcgaaccccgacccctgcatatattatgcaatgtccctaccaactgagctaagctcacggggac 23405193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 467 - 511
Target Start/End: Original strand, 23984189 - 23984234
Alignment:
Q  467 ggagctcacacattt-aaatgtggagaagtggggtgtccggagttc 511  Q
    |||| |||||||||| ||||||||||||||||||||||||| ||||    
T  23984189 ggagttcacacattttaaatgtggagaagtggggtgtccggggttc 23984234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 479 - 548
Target Start/End: Original strand, 25515999 - 25516067
Alignment:
Q  479 tttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctg 548  Q
    ||||||||||||||||||||||||||| ||||| ||   ||| | ||| ||||| |||||||||||||||    
T  25515999 tttaaatgtggagaagtggggtgtccgaagttcgaactgcgatc-ctgtataaaatatgcaatgtccctg 25516067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 467 - 511
Target Start/End: Complemental strand, 32854636 - 32854591
Alignment:
Q  467 ggagctcacacattt-aaatgtggagaagtggggtgtccggagttc 511  Q
    ||||||||||||||| |||||||||||||| |||||||||| ||||    
T  32854636 ggagctcacacattttaaatgtggagaagtagggtgtccggggttc 32854591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 469 - 545
Target Start/End: Complemental strand, 431484 - 431409
Alignment:
Q  469 agctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtcc 545  Q
    ||||||||||||||||  || | ||||| ||||||| || |||||| | || ||||| |||||||||||||||||||    
T  431484 agctcacacatttaaacatgaaaaagtgaggtgtccagatttcaaaccccg-cctctacataaattatgcaatgtcc 431409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 471 - 558
Target Start/End: Complemental strand, 2305171 - 2305083
Alignment:
Q  471 ctcacacatttaaat-gtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagt 558  Q
    |||||||| |||||| |||||||||||| |||||| |||||  || | || || ||||||| | |||||||| |||||||||| |||||    
T  2305171 ctcacacaattaaattgtggagaagtggagtgtccagagtttgaaccccggcccctgcatataatatgcaatatccctgtcaaatgagt 2305083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 468 - 511
Target Start/End: Original strand, 11050724 - 11050768
Alignment:
Q  468 gagctcacaca-tttaaatgtggagaagtggggtgtccggagttc 511  Q
    ||||||||||| ||||| | |||||||||||||||||||||||||    
T  11050724 gagctcacacaatttaattatggagaagtggggtgtccggagttc 11050768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 468 - 511
Target Start/End: Original strand, 16385009 - 16385053
Alignment:
Q  468 gagctcacaca-tttaaatgtggagaagtggggtgtccggagttc 511  Q
    ||||||||||| ||||| ||||||||||||| |||||||||||||    
T  16385009 gagctcacacaatttaattgtggagaagtggagtgtccggagttc 16385053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 471 - 511
Target Start/End: Complemental strand, 25932635 - 25932595
Alignment:
Q  471 ctcacacatttaaatgtggagaagtggggtgtccggagttc 511  Q
    ||||||||||| ||||||||| ||||||||||| |||||||    
T  25932635 ctcacacattttaatgtggagtagtggggtgtctggagttc 25932595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 468 - 511
Target Start/End: Original strand, 28153109 - 28153153
Alignment:
Q  468 gagctcacaca-tttaaatgtggagaagtggggtgtccggagttc 511  Q
    ||||||||||| ||||| |||||||||||||||||||||| ||||    
T  28153109 gagctcacacaatttaattgtggagaagtggggtgtccggggttc 28153153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 468 - 511
Target Start/End: Complemental strand, 28194735 - 28194691
Alignment:
Q  468 gagctcacaca-tttaaatgtggagaagtggggtgtccggagttc 511  Q
    ||||||||||| ||||| |||||||||||||||||||||| ||||    
T  28194735 gagctcacacaatttaattgtggagaagtggggtgtccggggttc 28194691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 473 - 541
Target Start/End: Original strand, 37512349 - 37512417
Alignment:
Q  473 cacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaat 541  Q
    |||||| ||||| ||| ||||||||||||||||  |||| || | || ||||| |||||||||||||||    
T  37512349 cacacaattaaacgtgaagaagtggggtgtccgaggttcgaaccccggcctctacataaattatgcaat 37512417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 55; Significance: 3e-22; HSPs: 71)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 468 - 574
Target Start/End: Complemental strand, 12770470 - 12770364
Alignment:
Q  468 gagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagttatgcttac 567  Q
    ||||||||||| ||||||||||||||||||||||||||| |||| || | || || |||||||||||||||||||||||| |||| |||| || ||| |     
T  12770470 gagctcacacaattaaatgtggagaagtggggtgtccggggttcgaaccccggcccctgcataaattatgcaatgtccctatcaactgagctaagctcat 12770371  T
Q  568 ggggaca 574  Q
    |||||||    
T  12770370 ggggaca 12770364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 468 - 557
Target Start/End: Complemental strand, 43847037 - 43846948
Alignment:
Q  468 gagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgag 557  Q
    ||||||||||| ||||||||||||||||||||||||| | |||| ||  |||||| |||||||||||||||||||| |||||||| ||||    
T  43847037 gagctcacacaattaaatgtggagaagtggggtgtccagggttcgaacatcgacccctgcataaattatgcaatgttcctgtcaactgag 43846948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 467 - 574
Target Start/End: Complemental strand, 41272197 - 41272090
Alignment:
Q  467 ggagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagttatgctta 566  Q
    ||||||||||||||||||||||||||||||| |||||| |||||| || | |  || ||||||||||||||||||||||||   ||||||| ||| || |    
T  41272197 ggagctcacacatttaaatgtggagaagtggtgtgtccagagttcgaaccccagcccctgcataaattatgcaatgtccctactaattgagctatactca 41272098  T
Q  567 cggggaca 574  Q
    ||||||||    
T  41272097 cggggaca 41272090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 471 - 573
Target Start/End: Complemental strand, 481110 - 481008
Alignment:
Q  471 ctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagttatgcttacggg 570  Q
    |||||||| ||||||||||||||||||||||||||| |||| || | || || ||||||||||||||||||||||||  ||| |||| || ||| |||||    
T  481110 ctcacacaattaaatgtggagaagtggggtgtccggggttcgaaccgcggcccctgcataaattatgcaatgtccctaccaactgagctaagctcacggg 481011  T
Q  571 gac 573  Q
    |||    
T  481010 gac 481008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 478 - 570
Target Start/End: Original strand, 10587255 - 10587347
Alignment:
Q  478 atttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagttatgcttacggg 570  Q
    |||||| ||||||||||||||||||||||||||| ||||||||||| |||||| | |||||||| |||||  ||| |||| || |||||||||    
T  10587255 atttaattgtggagaagtggggtgtccggagttcgaatctcgacctttgcatataatatgcaatatccctaccaactgagctaagcttacggg 10587347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 447 - 557
Target Start/End: Original strand, 25812156 - 25812266
Alignment:
Q  447 ggtctagtagtctattggtcggagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccc 546  Q
    |||||||||| ||| ||||  ||||||||||| |||||||| ||||||||||||||| || |||| || | ||  | || ||||||||||||||||||||    
T  25812156 ggtctagtagcctagtggttagagctcacacaattaaatgttgagaagtggggtgtctggggttcgaaccccggaccctccataaattatgcaatgtccc 25812255  T
Q  547 tgtcaattgag 557  Q
    || ||||||||    
T  25812256 tgccaattgag 25812266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 452 - 545
Target Start/End: Complemental strand, 42023529 - 42023435
Alignment:
Q  452 agtagtctattggtcggagctcacacattt-aaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtcc 545  Q
    ||||| ||| |||| |||||||||| |||| ||||||||||||||||| |||| || ||||||| ||| ||| ||||||||||||||||||||||    
T  42023529 agtagcctaatggttggagctcacatattttaaatgtggagaagtgggatgtcaggggttcaaacctctacccctgcataaattatgcaatgtcc 42023435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 475 - 560
Target Start/End: Original strand, 6851001 - 6851086
Alignment:
Q  475 cacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagtta 560  Q
    |||||||||||||||||||||  ||||||||| |||| |||| | ||| ||||||||||||||||||||| ||  |||||||||||    
T  6851001 cacatttaaatgtggagaagtaaggtgtccggggttcgaatccctacccctgcataaattatgcaatgtctctaccaattgagtta 6851086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 468 - 569
Target Start/End: Complemental strand, 10083265 - 10083164
Alignment:
Q  468 gagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagttatgcttac 567  Q
    |||||||||||| ||||| |||||||||||||||||||| |||| || ||||||| ||||||| | |||||||| |||||  ||| ||||||| ||| ||    
T  10083265 gagctcacacatataaatatggagaagtggggtgtccggggttcgaacctcgacccctgcatataatatgcaatatccctaccaactgagttaagctcac 10083166  T
Q  568 gg 569  Q
    ||    
T  10083165 gg 10083164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 468 - 557
Target Start/End: Complemental strand, 11231522 - 11231433
Alignment:
Q  468 gagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgag 557  Q
    ||||||||||| |||| ||| |||||||||||||||||| |||| || | || || |||||||||||||||||||||||| |||| ||||    
T  11231522 gagctcacacaattaattgtcgagaagtggggtgtccggggttcgaaccccggcccctgcataaattatgcaatgtccctttcaactgag 11231433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 448 - 547
Target Start/End: Original strand, 26192664 - 26192763
Alignment:
Q  448 gtctagtagtctattggtcggagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccct 547  Q
    ||||||||||||| |||   ||| |||||||||| ||| |||||||||||||||||||| |||| || | ||||||||||||| | |||||||| |||||    
T  26192664 gtctagtagtctagtggctagagttcacacattttaatatggagaagtggggtgtccggggttcgaaccccgacctctgcatataatatgcaatatccct 26192763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 462 - 548
Target Start/End: Complemental strand, 550409 - 550323
Alignment:
Q  462 tggtcggagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctg 548  Q
    |||| |||||||||||||||||||||| |||||||| |||| ||   ||| || | ||||| |||||||||||||||||||||||||    
T  550409 tggttggagctcacacatttaaatgtgaagaagtggagtgttcgagattcgaaccccgacccctgcataaattatgcaatgtccctg 550323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 452 - 574
Target Start/End: Complemental strand, 2115001 - 2114880
Alignment:
Q  452 agtagtctattggtcggagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtca 551  Q
    ||||||||| |||  ||||| |||||| |||||||||||||||||||||||||||||||| || || | ||| |||||||| |||| | |||| ||  ||    
T  2115001 agtagtctagtggctggagcccacacaattaaatgtggagaagtggggtgtccggagttcgaacctggccct-tgcataaaatatgtattgtctctacca 2114903  T
Q  552 attgagttatgcttacggggaca 574  Q
    | ||||||| ||| |||||||||    
T  2114902 actgagttaagctcacggggaca 2114880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 468 - 541
Target Start/End: Original strand, 7763906 - 7763980
Alignment:
Q  468 gagctcacaca-tttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaat 541  Q
    ||||||||||| ||||| |||||||||||||||||||||||||||||||| || || ||||||| | ||||||||    
T  7763906 gagctcacacaatttaattgtggagaagtggggtgtccggagttcaaatcccggcccctgcatataatatgcaat 7763980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 452 - 572
Target Start/End: Complemental strand, 2792898 - 2792777
Alignment:
Q  452 agtagtctattggtcggagctcacacatttaaat-gtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtc 550  Q
    ||||||||| |||| |||||||||||| |||||| |||||||||||| |||||||| |||| || | || || ||||||| | |||||||| ||||| ||    
T  2792898 agtagtctagtggttggagctcacacaattaaattgtggagaagtggagtgtccggggttcgaaccccggcccctgcatataatatgcaatatccctatc 2792799  T
Q  551 aattgagttatgcttacgggga 572  Q
    || |||| || ||| |||||||    
T  2792798 aactgagctaagctcacgggga 2792777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 468 - 557
Target Start/End: Original strand, 25824870 - 25824959
Alignment:
Q  468 gagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgag 557  Q
    ||||||||||| ||| |||| ||||||||||||||| || |||| || | |||||  |||||||||||||||||||||||  ||||||||    
T  25824870 gagctcacacaattatatgttgagaagtggggtgtctggggttcgaaccccgacccttgcataaattatgcaatgtccctaccaattgag 25824959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 447 - 560
Target Start/End: Complemental strand, 38283247 - 38283134
Alignment:
Q  447 ggtctagtagtctattggtcggagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccc 546  Q
    |||||||||| ||| |||   ||| ||||||| |||||||||||||||||||||||| || |||| || | || || |||||||||||||  ||||||||    
T  38283247 ggtctagtagcctagtggctagagttcacacaattaaatgtggagaagtggggtgtctggggttcgaaccccggcccctgcataaattatataatgtccc 38283148  T
Q  547 tgtcaattgagtta 560  Q
    || ||| |||||||    
T  38283147 tgccaactgagtta 38283134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 448 - 560
Target Start/End: Original strand, 15856454 - 15856566
Alignment:
Q  448 gtctagtagtctattggtcggagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccct 547  Q
    ||||||||| ||| ||||  ||||||||||| ||||||||||||||||||||||||||  |||  || | ||  | ||| ||||||||||||||||||||    
T  15856454 gtctagtagcctagtggttagagctcacacaattaaatgtggagaagtggggtgtccgaggtttgaaccccggtccctgtataaattatgcaatgtccct 15856553  T
Q  548 gtcaattgagtta 560  Q
      ||| |||||||    
T  15856554 accaactgagtta 15856566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 474 - 574
Target Start/End: Complemental strand, 22717887 - 22717787
Alignment:
Q  474 acacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagttatgcttacggggac 573  Q
    ||||| |||| ||| |||||||||||||||||| |||| || |||| || |||||||||||||||||||| ||| |||| |||| || ||| | ||||||    
T  22717887 acacaattaattgtcgagaagtggggtgtccggggttcgaacctcggcccctgcataaattatgcaatgttcctttcaactgagctaagctcatggggac 22717788  T
Q  574 a 574  Q
    |    
T  22717787 a 22717787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 447 - 541
Target Start/End: Original strand, 3912110 - 3912205
Alignment:
Q  447 ggtctagtagtctattggtcggagctcacacatt-taaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaat 541  Q
    |||||||||| ||| |||   ||||||||||||| |||||||||||||||||||||||| |  |||||| |||| |||||||||| | ||||||||    
T  3912110 ggtctagtagcctagtggctagagctcacacattataaatgtggagaagtggggtgtccaggattcaaacctcggcctctgcatataatatgcaat 3912205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 468 - 549
Target Start/End: Complemental strand, 31406859 - 31406778
Alignment:
Q  468 gagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgt 549  Q
    ||||||||||| ||||||||||||||||| ||| ||||  |||| || | || || ||||||||||||||||| ||||||||    
T  31406859 gagctcacacaattaaatgtggagaagtgtggtatccgaggttcgaaccccggcccctgcataaattatgcaacgtccctgt 31406778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 468 - 572
Target Start/End: Complemental strand, 34894472 - 34894367
Alignment:
Q  468 gagctcacaca-tttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagttatgctta 566  Q
    ||||||||||| ||||| |||||||||||||||||||||| |||| || | || || ||||||| | |||||||| |||||  ||| |||| || |||||    
T  34894472 gagctcacacaatttaactgtggagaagtggggtgtccggggttcgaaccccggcccctgcatataatatgcaatatccctaccaactgagctaagctta 34894373  T
Q  567 cgggga 572  Q
    ||||||    
T  34894372 cgggga 34894367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 480 - 557
Target Start/End: Complemental strand, 40393408 - 40393331
Alignment:
Q  480 ttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgag 557  Q
    ||||||||||||||| ||||||| ||| |||| || | ||||| |||||||||||||||||| | |||| ||||||||    
T  40393408 ttaaatgtggagaagaggggtgttcggggttcgaaccccgacccctgcataaattatgcaatattcctgccaattgag 40393331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 468 - 544
Target Start/End: Original strand, 3187385 - 3187461
Alignment:
Q  468 gagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtc 544  Q
    ||||||||||| |||||||||||| ||||| ||||||| ||||| ||   | | |||||||||||||||||||||||    
T  3187385 gagctcacacaattaaatgtggaggagtggagtgtccgaagttcgaactccaatctctgcataaattatgcaatgtc 3187461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 468 - 547
Target Start/End: Original strand, 2908059 - 2908138
Alignment:
Q  468 gagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccct 547  Q
    |||||||||||||| |||| ||||||||||||||||| | |||| || | || || ||||||| |||||||| |||||||    
T  2908059 gagctcacacattttaatgcggagaagtggggtgtccagggttcgaaccccggcccctgcatatattatgcattgtccct 2908138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 467 - 573
Target Start/End: Original strand, 13059143 - 13059250
Alignment:
Q  467 ggagctcacacattt-aaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagttatgctt 565  Q
    ||||| ||||||||| |||||||||||||||||||||| || |||| || | |  || |||||||||||||||| |||||||  ||| |||| || |||     
T  13059143 ggagcacacacattttaaatgtggagaagtggggtgtcaggggttcgaacccctgcccctgcataaattatgcattgtccctaccaactgagctaagctc 13059242  T
Q  566 acggggac 573  Q
    ||||||||    
T  13059243 acggggac 13059250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 468 - 563
Target Start/End: Original strand, 20894667 - 20894761
Alignment:
Q  468 gagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagttatgc 563  Q
    ||||||||||| |||| |||||||||||| | |||| | ||||| || | || ||  |||||||||||||||||||||||| ||| ||||||||||    
T  20894667 gagctcacacaattaattgtggagaagtgagatgtctg-agttcgaaccccggcccttgcataaattatgcaatgtccctgccaactgagttatgc 20894761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 480 - 547
Target Start/End: Original strand, 25890384 - 25890451
Alignment:
Q  480 ttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccct 547  Q
    |||| |||||||||||||||||||||| |||| || | || ||  |||||||||||||||||||||||    
T  25890384 ttaattgtggagaagtggggtgtccggggttcgaaccccggcccttgcataaattatgcaatgtccct 25890451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 468 - 511
Target Start/End: Complemental strand, 31712651 - 31712608
Alignment:
Q  468 gagctcacacatttaaatgtggagaagtggggtgtccggagttc 511  Q
    |||||||||||| |||||||||||||||||||||||||| ||||    
T  31712651 gagctcacacatataaatgtggagaagtggggtgtccggggttc 31712608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 486 - 573
Target Start/End: Complemental strand, 42877117 - 42877031
Alignment:
Q  486 gtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagttatgcttacggggac 573  Q
    ||||||||||||||||| ||| |||| || | || || ||||||||||||||||||||||||  |||||||| || ||| ||||||||    
T  42877117 gtggagaagtggggtgttcgg-gttcgaaccacggcccctgcataaattatgcaatgtccctaccaattgagctaagctcacggggac 42877031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 471 - 557
Target Start/End: Original strand, 20872430 - 20872515
Alignment:
Q  471 ctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgag 557  Q
    |||||||| |||||||||| |||||||||||| |||  ||| ||   ||||| |||||||||||||||||||||||| |||| ||||    
T  20872430 ctcacacaattaaatgtgg-gaagtggggtgttcgggattcgaactccgacccctgcataaattatgcaatgtccctatcaactgag 20872515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 482 - 560
Target Start/End: Complemental strand, 29547452 - 29547375
Alignment:
Q  482 aaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagtta 560  Q
    |||| ||||||||||||||||||||  || |||| ||  | |||||||| ||||||| |||||||||||||||||||||    
T  29547452 aaatatggagaagtggggtgtccgggatttaaat-tcagcttctgcatatattatgcgatgtccctgtcaattgagtta 29547375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 447 - 547
Target Start/End: Original strand, 27077043 - 27077144
Alignment:
Q  447 ggtctagtagtctattggtcggagctcacaca-tttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtcc 545  Q
    |||| ||||| ||| ||||  ||||||||||| ||||| ||||||||||||||||||||||  ||| || | ||||| ||||||| | |||||||| |||    
T  27077043 ggtcaagtagcctaatggttcgagctcacacaatttaattgtggagaagtggggtgtccgggattcgaaccccgacccctgcatataatatgcaatatcc 27077142  T
Q  546 ct 547  Q
    ||    
T  27077143 ct 27077144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 467 - 511
Target Start/End: Complemental strand, 31024398 - 31024353
Alignment:
Q  467 ggagctcacacattt-aaatgtggagaagtggggtgtccggagttc 511  Q
    ||||||||||||||| ||||||||||||||||||||||||| ||||    
T  31024398 ggagctcacacattttaaatgtggagaagtggggtgtccggggttc 31024353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 451 - 544
Target Start/End: Original strand, 31260896 - 31260989
Alignment:
Q  451 tagtagtctattggtcggagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtc 544  Q
    ||||||||||||||   ||||||||| | ||||| ||||||||||| ||| | ||| |||  |||| || || |||||||||||||||||||||    
T  31260896 tagtagtctattggctagagctcacataattaaacgtggagaagtgaggtattcggggtttgaatcccggcccctgcataaattatgcaatgtc 31260989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 454 - 530
Target Start/End: Complemental strand, 34873203 - 34873126
Alignment:
Q  454 tagtctattggtcggagctcacacattt-aaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcata 530  Q
    ||||||| |||  ||||||||||||||| ||||||||||||||||||||||||  |||| || | ||||| |||||||    
T  34873203 tagtctagtggctggagctcacacattttaaatgtggagaagtggggtgtccgaggttcgaaccccgacccctgcata 34873126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 468 - 572
Target Start/End: Original strand, 38219535 - 38219640
Alignment:
Q  468 gagctcacaca-tttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagttatgctta 566  Q
    ||||||||||| ||||| ||||||||||||| |||||||| |||| || | ||||  ||||||| | |||||||| |||||  ||| |||| |||||| |    
T  38219535 gagctcacacaatttaattgtggagaagtggagtgtccggggttcgaaccccgactcctgcatataatatgcaatatccctaccaactgagctatgctca 38219634  T
Q  567 cgggga 572  Q
    ||||||    
T  38219635 cgggga 38219640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 467 - 572
Target Start/End: Original strand, 41616333 - 41616438
Alignment:
Q  467 ggagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagttatgctta 566  Q
    ||||||||||||||  ||||||||||||||| || ||||| |||| || | || || ||||||| | ||| |||| |||||  ||| ||||||||||| |    
T  41616333 ggagctcacacattataatgtggagaagtggagtatccggggttcgaaccccggcccctgcatataatatacaatatccctaccaactgagttatgctca 41616432  T
Q  567 cgggga 572  Q
    ||||||    
T  41616433 cgggga 41616438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 467 - 511
Target Start/End: Original strand, 44053406 - 44053451
Alignment:
Q  467 ggagctcacacattt-aaatgtggagaagtggggtgtccggagttc 511  Q
    ||||||||||||||| ||||||||||||||||||||||||| ||||    
T  44053406 ggagctcacacattttaaatgtggagaagtggggtgtccggggttc 44053451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 467 - 560
Target Start/End: Complemental strand, 44156814 - 44156722
Alignment:
Q  467 ggagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagtta 560  Q
    |||||||||||| ||||||||| ||||| ||||||||| | |||| ||   || || ||||||||||||||||||||| ||  |||||||||||    
T  44156814 ggagctcacacaattaaatgtgaagaag-ggggtgtccagggttcgaactccgtcccctgcataaattatgcaatgtctctaccaattgagtta 44156722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 468 - 511
Target Start/End: Original strand, 2626032 - 2626076
Alignment:
Q  468 gagctcacaca-tttaaatgtggagaagtggggtgtccggagttc 511  Q
    ||||||||||| ||||| |||||||||||||||||||||||||||    
T  2626032 gagctcacacaatttaattgtggagaagtggggtgtccggagttc 2626076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 471 - 519
Target Start/End: Complemental strand, 4444358 - 4444311
Alignment:
Q  471 ctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcg 519  Q
    ||||||||||| ||||||||||||| ||||||||||||||| |||||||    
T  4444358 ctcacacattttaatgtggagaagt-gggtgtccggagttcgaatctcg 4444311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 467 - 506
Target Start/End: Complemental strand, 33810744 - 33810704
Alignment:
Q  467 ggagctcacacattt-aaatgtggagaagtggggtgtccgg 506  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  33810744 ggagctcacacattttaaatgtggagaagtggggtgtccgg 33810704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 467 - 530
Target Start/End: Original strand, 36035145 - 36035209
Alignment:
Q  467 ggagctcacacattt-aaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcata 530  Q
    ||||||||||||||| ||||||||||||||||||||||||  |||| || | ||||| |||||||    
T  36035145 ggagctcacacattttaaatgtggagaagtggggtgtccgaggttcgaaccccgacccctgcata 36035209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 452 - 511
Target Start/End: Complemental strand, 41086733 - 41086673
Alignment:
Q  452 agtagtctattggtcggagctcacaca-tttaaatgtggagaagtggggtgtccggagttc 511  Q
    ||||| ||| ||||| ||||||||||| ||||| |||||||||||||||||| ||||||||    
T  41086733 agtagcctagtggtcagagctcacacaatttaattgtggagaagtggggtgttcggagttc 41086673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 469 - 505
Target Start/End: Complemental strand, 41458396 - 41458360
Alignment:
Q  469 agctcacacatttaaatgtggagaagtggggtgtccg 505  Q
    ||||||||||||||||||||||||||||| |||||||    
T  41458396 agctcacacatttaaatgtggagaagtggagtgtccg 41458360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 492 - 574
Target Start/End: Complemental strand, 2696608 - 2696525
Alignment:
Q  492 aagtggggtgtccggagttcaaatctcgacctctgcata-aattatgcaatgtccctgtcaattgagttatgcttacggggaca 574  Q
    ||||||||||||||| |||| || | || || ||||||| ||| ||||| |||||||| ||| ||||||||||| |||||||||    
T  2696608 aagtggggtgtccggggttcgaaccccggcccctgcatataataatgcattgtccctgccaactgagttatgctcacggggaca 2696525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 468 - 514
Target Start/End: Complemental strand, 10568188 - 10568141
Alignment:
Q  468 gagctcacaca-tttaaatgtggagaagtggggtgtccggagttcaaa 514  Q
    ||||||||||| ||||| |||||||||||||||||||||| |||||||    
T  10568188 gagctcacacaatttaattgtggagaagtggggtgtccggggttcaaa 10568141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 468 - 511
Target Start/End: Original strand, 22274579 - 22274622
Alignment:
Q  468 gagctcacacatttaaatgtggagaagtggggtgtccggagttc 511  Q
    ||||||||||| |||| |||||||||||||||||||||| ||||    
T  22274579 gagctcacacaattaattgtggagaagtggggtgtccggggttc 22274622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 452 - 514
Target Start/End: Complemental strand, 26217910 - 26217847
Alignment:
Q  452 agtagtctattggtcggagctcacacattt-aaatgtggagaagtggggtgtccggagttcaaa 514  Q
    |||||| || |||| |||| |||||||||| ||||||||||||||| |||||||||||| ||||    
T  26217910 agtagtttagtggttggagatcacacattttaaatgtggagaagtgaggtgtccggagtacaaa 26217847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 468 - 570
Target Start/End: Complemental strand, 37291025 - 37290922
Alignment:
Q  468 gagctcacaca-tttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagttatgctta 566  Q
    ||||||||||| ||||| |||||||||||||||||||||| |||| ||   || || ||||||| | |||||||| ||||| |||| | ||||| ||| |    
T  37291025 gagctcacacaatttaattgtggagaagtggggtgtccggggttcgaacgccggcccctgcatataatatgcaatatccctatcaactaagttaagctca 37290926  T
Q  567 cggg 570  Q
    ||||    
T  37290925 cggg 37290922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 468 - 511
Target Start/End: Original strand, 44088924 - 44088967
Alignment:
Q  468 gagctcacacatttaaatgtggagaagtggggtgtccggagttc 511  Q
    ||||||||||| |||||| ||||||||||||||||||| |||||    
T  44088924 gagctcacacaattaaatatggagaagtggggtgtccgaagttc 44088967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 492 - 569
Target Start/End: Complemental strand, 7314808 - 7314730
Alignment:
Q  492 aagtggggtgtccggagttcaaatctcgacctctgcata-aattatgcaatgtccctgtcaattgagttatgcttacgg 569  Q
    ||||||||||||||| |||| || |||| || ||||||| ||| ||| | |||||||| ||||||||||||||| ||||    
T  7314808 aagtggggtgtccggggttcgaacctcggcccctgcatataataatgtattgtccctgccaattgagttatgctcacgg 7314730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 478 - 572
Target Start/End: Original strand, 8034390 - 8034484
Alignment:
Q  478 atttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagttatgcttacgggga 572  Q
    |||||| ||||||||||||||||||| || |||| || | || || ||||||| | |||||||| |||||  ||| ||||||| ||| |||||||    
T  8034390 atttaattgtggagaagtggggtgtctggtgttcgaaccccggcccctgcatataatatgcaatatccctaccaactgagttaagctcacgggga 8034484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 468 - 506
Target Start/End: Original strand, 8698548 - 8698586
Alignment:
Q  468 gagctcacacatttaaatgtggagaagtggggtgtccgg 506  Q
    ||||||||| ||||||||||| |||||||||||||||||    
T  8698548 gagctcacatatttaaatgtgaagaagtggggtgtccgg 8698586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 467 - 560
Target Start/End: Complemental strand, 13105195 - 13105101
Alignment:
Q  467 ggagctcacacattt-aaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagtta 560  Q
    ||||||||||||||| |||||||||||||||||||||| |  |||| || | || ||  |||||| |||||||| |||||||  ||| |||||||    
T  13105195 ggagctcacacattttaaatgtggagaagtggggtgtctgaggttcgaaccccggcccttgcatatattatgcattgtccctaccaactgagtta 13105101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 471 - 569
Target Start/End: Complemental strand, 22202811 - 22202714
Alignment:
Q  471 ctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagttatgcttacgg 569  Q
    |||| ||| ||||||||||| |||||||||||  || ||| ||||| | ||  ||||||||||||||||||||||||  ||| ||||||| ||| ||||    
T  22202811 ctcatacaattaaatgtggaaaagtggggtgtttgg-gtttaaatcccaactcctgcataaattatgcaatgtccctaccaactgagttaagctcacgg 22202714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 467 - 545
Target Start/End: Complemental strand, 26823773 - 26823695
Alignment:
Q  467 ggagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtcc 545  Q
    ||||||||||||| |||||||||||||| | ||||||||| |||| ||   |||||  | ||||||||||| |||||||    
T  26823773 ggagctcacacatataaatgtggagaagggtggtgtccggggttcgaactccgacccatacataaattatgtaatgtcc 26823695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 468 - 569
Target Start/End: Original strand, 31450924 - 31451026
Alignment:
Q  468 gagctcacaca-tttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagttatgctta 566  Q
    ||||||||||| ||||| ||||||||||||| ||||||||||||| || | || |  ||||||| | |||||||| |||||  ||| ||||||| ||| |    
T  31450924 gagctcacacaatttaattgtggagaagtggagtgtccggagttcgaaccccggctcctgcatataatatgcaatatccctaccaactgagttaagctca 31451023  T
Q  567 cgg 569  Q
    |||    
T  31451024 cgg 31451026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 468 - 505
Target Start/End: Original strand, 3949049 - 3949086
Alignment:
Q  468 gagctcacacatttaaatgtggagaagtggggtgtccg 505  Q
    ||||||||||| |||| |||||||||||||||||||||    
T  3949049 gagctcacacaattaattgtggagaagtggggtgtccg 3949086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 468 - 572
Target Start/End: Original strand, 5328534 - 5328639
Alignment:
Q  468 gagctcacacatttaaat-gtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagttatgctta 566  Q
    |||||||||||||| ||| ||||||||||| ||||||||| |||| || | || || ||||||| | |||||||| |||||  ||| |||| || |||||    
T  5328534 gagctcacacattttaattgtggagaagtgaggtgtccggggttcgaaccccggcccctgcatataatatgcaatatccctaccaactgagctaagctta 5328633  T
Q  567 cgggga 572  Q
    | ||||    
T  5328634 caggga 5328639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 468 - 541
Target Start/End: Complemental strand, 5683856 - 5683783
Alignment:
Q  468 gagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaat 541  Q
    |||||||||||| ||||||||||||||| ||||||| || |||| || | | ||| ||||||| | ||||||||    
T  5683856 gagctcacacatataaatgtggagaagtagggtgtctggggttcgaaccccaacccctgcatataatatgcaat 5683783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 468 - 572
Target Start/End: Complemental strand, 8265371 - 8265266
Alignment:
Q  468 gagctcacacatttaaat-gtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagttatgctta 566  Q
    ||||||||||| |||||| |||||||||||| |||||||| |||| || |  |||| ||||||| | |||||||| |||||  ||| |||| || ||| |    
T  8265371 gagctcacacaattaaattgtggagaagtggagtgtccggggttcgaaccctgacccctgcatataatatgcaatatccctaccaactgagctaagctca 8265272  T
Q  567 cgggga 572  Q
    ||||||    
T  8265271 cgggga 8265266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 467 - 511
Target Start/End: Complemental strand, 37708795 - 37708750
Alignment:
Q  467 ggagctcacacattt-aaatgtggagaagtggggtgtccggagttc 511  Q
    ||||||||||||||| ||||||||||||||||| ||||||| ||||    
T  37708795 ggagctcacacattttaaatgtggagaagtgggatgtccggggttc 37708750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 468 - 572
Target Start/End: Complemental strand, 37717466 - 37717361
Alignment:
Q  468 gagctcacaca-tttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagttatgctta 566  Q
    ||||||||||| ||||| ||||||||||||| |||||||| |||| || | || |  ||||||| | |||||||| |||||  ||| ||||||| ||| |    
T  37717466 gagctcacacaatttaattgtggagaagtggagtgtccggggttcgaaccccggctcctgcatataatatgcaatatccctaccaactgagttaagctca 37717367  T
Q  567 cgggga 572  Q
    ||||||    
T  37717366 cgggga 37717361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 462 - 545
Target Start/End: Original strand, 14181303 - 14181387
Alignment:
Q  462 tggtcggagctcacacattt-aaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtcc 545  Q
    |||| |||||||| |||||| ||||| ||||||||| | |||| |  |||| |||| | ||||||||||| ||||||||||||||    
T  14181303 tggttggagctcatacattttaaatgcggagaagtgagatgtcggaggttcgaatcccaacctctgcatatattatgcaatgtcc 14181387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 471 - 547
Target Start/End: Original strand, 22437762 - 22437837
Alignment:
Q  471 ctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccct 547  Q
    |||||||  |||||||||||||| || |||||| || |||| || ||| ||| |||||||||||||||||| |||||    
T  22437762 ctcacacgattaaatgtggagaactgaggtgtctggggttcgaa-ctcaacccctgcataaattatgcaatatccct 22437837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 468 - 547
Target Start/End: Complemental strand, 32258110 - 32258030
Alignment:
Q  468 gagctcacaca-tttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccct 547  Q
    ||||||||||| ||||| |||||||||||||||||||| |  ||| || ||||||| | ||||| | |||||||| |||||    
T  32258110 gagctcacacaatttaattgtggagaagtggggtgtccaggattcgaacctcgacccccgcatagaatatgcaatatccct 32258030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 469 - 557
Target Start/End: Original strand, 37981208 - 37981295
Alignment:
Q  469 agctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgag 557  Q
    |||||||||| ||||||||| |||||||| ||||| | ||||| |||| | |  ||| |||||||||||| |||||| |||||| ||||    
T  37981208 agctcacacaattaaatgtgaagaagtggcgtgtctgaagttcgaatc-caatttctacataaattatgcgatgtccttgtcaactgag 37981295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 471 - 530
Target Start/End: Original strand, 42511553 - 42511613
Alignment:
Q  471 ctcacacatt-taaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcata 530  Q
    |||||||||| ||||||||||||| |||||||| ||| ||||||| | ||||| |||||||    
T  42511553 ctcacacattataaatgtggagaaatggggtgttcggggttcaaaccccgacccctgcata 42511613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 471 - 511
Target Start/End: Complemental strand, 44444643 - 44444603
Alignment:
Q  471 ctcacacatttaaatgtggagaagtggggtgtccggagttc 511  Q
    |||||||| |||| |||||||||||||||||||||| ||||    
T  44444643 ctcacacaattaattgtggagaagtggggtgtccggggttc 44444603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 53; Significance: 4e-21; HSPs: 47)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 456 - 556
Target Start/End: Original strand, 9689259 - 9689359
Alignment:
Q  456 gtctattggtcggagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattg 555  Q
    ||||| |||| | ||||||||||||||||| ||||| |||||||||||| | |||| || | |||||||| |||||||||||||||||| ||||||||||    
T  9689259 gtctaatggttgaagctcacacatttaaatatggaggagtggggtgtccagggttcgaaccccgacctctacataaattatgcaatgtcactgtcaattg 9689358  T
Q  556 a 556  Q
    |    
T  9689359 a 9689359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 469 - 554
Target Start/End: Original strand, 34574123 - 34574209
Alignment:
Q  469 agctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaa-ttatgcaatgtccctgtcaatt 554  Q
    |||||||||||||||||||||||||||||||||| ||| |||  || | ||||||||||||||| |||||||||||||||| |||||    
T  34574123 agctcacacatttaaatgtggagaagtggggtgttcggggtttgaaccccgacctctgcataaatttatgcaatgtccctgccaatt 34574209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 468 - 560
Target Start/End: Complemental strand, 8443641 - 8443549
Alignment:
Q  468 gagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagtta 560  Q
    ||||||||| | ||||||||||||||||||||||||||| |||| || |  |||| |||||||||||||| ||||| |||||||| |||||||    
T  8443641 gagctcacagaattaaatgtggagaagtggggtgtccggggttctaaccatgacccctgcataaattatgtaatgttcctgtcaactgagtta 8443549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 468 - 560
Target Start/End: Complemental strand, 8452445 - 8452353
Alignment:
Q  468 gagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagtta 560  Q
    ||||||||| | ||||||||||||||||||||||||||| |||| || |  |||| |||||||||||||| ||||| |||||||| |||||||    
T  8452445 gagctcacagaattaaatgtggagaagtggggtgtccggggttctaaccatgacccctgcataaattatgtaatgttcctgtcaactgagtta 8452353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 448 - 569
Target Start/End: Complemental strand, 607109 - 606988
Alignment:
Q  448 gtctagtagtctattggtcggagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccct 547  Q
    ||||||||| ||| |||| |  ||||||||| |||| |||||||||||||||||| |||||||| || ||||  | |||||||||||||||||| |||||    
T  607109 gtctagtagcctagtggttgtggctcacacaattaattgtggagaagtggggtgttcggagttcgaacctcggtccctgcataaattatgcaatatccct 607010  T
Q  548 gtcaattgagttatgcttacgg 569  Q
       ||||||| |||||| ||||    
T  607009 actaattgagctatgctcacgg 606988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 471 - 547
Target Start/End: Complemental strand, 17534946 - 17534870
Alignment:
Q  471 ctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccct 547  Q
    |||||||| ||||||||||||||||  |||||||||||||| || | || || ||||||||||||||||||||||||    
T  17534946 ctcacacaattaaatgtggagaagtcaggtgtccggagttcgaaccccggcccctgcataaattatgcaatgtccct 17534870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 447 - 547
Target Start/End: Complemental strand, 24319136 - 24319036
Alignment:
Q  447 ggtctagtagtctattggtcggagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccc 546  Q
    |||||||||| ||| |||   ||||||||||| |||| ||||||||||||| |||||||| |||| || | || || |||||||||||||||||||||||    
T  24319136 ggtctagtagcctaatggctagagctcacacaattaattgtggagaagtggagtgtccggggttcgaaccccggcccctgcataaattatgcaatgtccc 24319037  T
Q  547 t 547  Q
    |    
T  24319036 t 24319036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 447 - 547
Target Start/End: Original strand, 23610266 - 23610366
Alignment:
Q  447 ggtctagtagtctattggtcggagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccc 546  Q
    |||||||||| ||| |||  ||||||| |||| |||| |||| ||||||||||||||| | |||  || | ||||| |||||||||||||||||||||||    
T  23610266 ggtctagtagcctagtggctggagctcgcacaattaattgtgaagaagtggggtgtccagcgtttgaaccccgacccctgcataaattatgcaatgtccc 23610365  T
Q  547 t 547  Q
    |    
T  23610366 t 23610366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 447 - 511
Target Start/End: Original strand, 29646495 - 29646559
Alignment:
Q  447 ggtctagtagtctattggtcggagctcacacatttaaatgtggagaagtggggtgtccggagttc 511  Q
    |||||||||| ||| |||  |||||||||||| ||||||||||||||||||||||||||| ||||    
T  29646495 ggtctagtagcctagtggctggagctcacacaattaaatgtggagaagtggggtgtccggggttc 29646559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 447 - 547
Target Start/End: Original strand, 32788801 - 32788901
Alignment:
Q  447 ggtctagtagtctattggtcggagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccc 546  Q
    |||||||||| ||| |||   ||||||| ||| ||||||||| |||||||||||||||||||||| || | | ||| ||||||||||||| ||||| |||    
T  32788801 ggtctagtagcctagtggctagagctcatacaattaaatgtgtagaagtggggtgtccggagttcgaaccccaacccctgcataaattatacaatgaccc 32788900  T
Q  547 t 547  Q
    |    
T  32788901 t 32788901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 468 - 570
Target Start/End: Complemental strand, 32166472 - 32166369
Alignment:
Q  468 gagctcacacatttaaat-gtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagttatgctta 566  Q
    ||||||||||| |||||| |||||||||||| |||||||| ||||||||| || || ||||||| | |||||||| |||||  |||||||| || ||| |    
T  32166472 gagctcacacaattaaattgtggagaagtggagtgtccggggttcaaatcccggcccctgcatataatatgcaatatccctaccaattgagctaagctca 32166373  T
Q  567 cggg 570  Q
    ||||    
T  32166372 cggg 32166369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 518 - 573
Target Start/End: Complemental strand, 32388278 - 32388223
Alignment:
Q  518 cgacctctgcataaattatgcaatgtccctgtcaattgagttatgcttacggggac 573  Q
    ||||| |||||||||||||||||||||||| |||| ||||||| ||||||||||||    
T  32388278 cgacccctgcataaattatgcaatgtccctatcaactgagttaagcttacggggac 32388223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 468 - 557
Target Start/End: Complemental strand, 2816993 - 2816903
Alignment:
Q  468 gagctcacaca-tttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgag 557  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||| ||||||  || ||||||| |  ||||||| |||||  ||||||||    
T  2816993 gagctcacacaatttaattgtggagaagtggggtgtccggagttcgaatctcagcccctgcatataacatgcaatatccctaccaattgag 2816903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 468 - 574
Target Start/End: Original strand, 11420955 - 11421060
Alignment:
Q  468 gagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagttatgcttac 567  Q
    ||||||||||||||||| ||||||||| ||| |||||||  ||| || | || || ||||||||||||||||||||||||| || ||||| || ||| ||    
T  11420955 gagctcacacatttaaacgtggagaagcgggatgtccgggtttcgaaccccggcc-ctgcataaattatgcaatgtccctgccagttgagctaagctcac 11421053  T
Q  568 ggggaca 574  Q
     ||||||    
T  11421054 agggaca 11421060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 453 - 530
Target Start/End: Complemental strand, 18904383 - 18904305
Alignment:
Q  453 gtagtctattggtcggagctcacacattt-aaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcata 530  Q
    |||||||| |||  ||||||||||||||| ||||||||||||||||||||||||| |||| || | ||||| |||||||    
T  18904383 gtagtctagtggctggagctcacacattttaaatgtggagaagtggggtgtccggggttcgaaccccgacccctgcata 18904305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 454 - 514
Target Start/End: Complemental strand, 5695030 - 5694970
Alignment:
Q  454 tagtctattggtcggagctcacacatttaaatgtggagaagtggggtgtccggagttcaaa 514  Q
    ||||||| |||  ||||||||||||||| |||||||||||||||||||||||  |||||||    
T  5695030 tagtctaatggctggagctcacacattttaatgtggagaagtggggtgtccgaggttcaaa 5694970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 489 - 557
Target Start/End: Complemental strand, 24756977 - 24756909
Alignment:
Q  489 gagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgag 557  Q
    |||||||||||| |  || |||| ||||||  ||||||||||||||||||||||||||| |||||||||    
T  24756977 gagaagtggggtatatggggttcgaatctcagcctctgcataaattatgcaatgtccctatcaattgag 24756909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 447 - 535
Target Start/End: Original strand, 35038649 - 35038737
Alignment:
Q  447 ggtctagtagtctattggtcggagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaatta 535  Q
    ||||||||||| || |||| ||||||| |||| |||||||| ||||| |||||||||||| |||| || | || || ||||||||||||    
T  35038649 ggtctagtagtgtagtggttggagctcgcacaattaaatgtagagaaatggggtgtccggggttcgaaccccggcccctgcataaatta 35038737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 447 - 547
Target Start/End: Complemental strand, 2251963 - 2251861
Alignment:
Q  447 ggtctagtagtctattggtcggagctcacacattt--aaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtc 544  Q
    |||| ||||| ||| ||| | ||||||||||||||  ||||||||||||||||||||||||| |||| || | || || ||||||| | |||||||| ||    
T  2251963 ggtcaagtagcctagtggccagagctcacacatttttaaatgtggagaagtggggtgtccggggttcgaaccccggcccctgcatatagtatgcaatatc 2251864  T
Q  545 cct 547  Q
    |||    
T  2251863 cct 2251861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 468 - 547
Target Start/End: Complemental strand, 34268384 - 34268305
Alignment:
Q  468 gagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccct 547  Q
    ||||||||||| |||| |||| |||||| |||||| ||| |||| || |  |||| ||||||||||||||||||||||||    
T  34268384 gagctcacacaattaattgtgaagaagtagggtgttcggggttcgaaccctgacccctgcataaattatgcaatgtccct 34268305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 467 - 573
Target Start/End: Original strand, 4577756 - 4577861
Alignment:
Q  467 ggagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagttatgctta 566  Q
    |||||||||||| |||||| || ||||||||||| || || ||||||| | ||||| ||| ||||||| |||||||| | | ||||||||| || ||| |    
T  4577756 ggagctcacacaattaaatttgaagaagtggggtatctggggttcaaaccccgacc-ctgtataaattgtgcaatgttcttatcaattgagctaagctca 4577854  T
Q  567 cggggac 573  Q
    |||||||    
T  4577855 cggggac 4577861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 468 - 506
Target Start/End: Complemental strand, 31104984 - 31104946
Alignment:
Q  468 gagctcacacatttaaatgtggagaagtggggtgtccgg 506  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  31104984 gagctcacacattttaatgtggagaagtggggtgtccgg 31104946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 478 - 547
Target Start/End: Original strand, 978112 - 978181
Alignment:
Q  478 atttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccct 547  Q
    |||||| |||||||||||||||||||||| |||| || | ||||| ||||||| | |||||||| |||||    
T  978112 atttaattgtggagaagtggggtgtccggtgttcgaaccccgacccctgcatataatatgcaatatccct 978181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 448 - 557
Target Start/End: Complemental strand, 32283660 - 32283551
Alignment:
Q  448 gtctagtagtctattggtcggagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccct 547  Q
    ||||||||||||| ||||   | |||||| | ||||||||||| |||||  ||||| || |||| || | |||||  |||||||||||||||||||||||    
T  32283660 gtctagtagtctagtggttataactcacataattaaatgtggaaaagtgaagtgtctggggttcgaaccccgacccttgcataaattatgcaatgtccct 32283561  T
Q  548 gtcaattgag 557  Q
      ||||||||    
T  32283560 accaattgag 32283551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 467 - 510
Target Start/End: Original strand, 1368153 - 1368197
Alignment:
Q  467 ggagctcacacattt-aaatgtggagaagtggggtgtccggagtt 510  Q
    ||||||||||||||| |||||||||||||||||||||| ||||||    
T  1368153 ggagctcacacattttaaatgtggagaagtggggtgtctggagtt 1368197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 522 - 573
Target Start/End: Original strand, 25088280 - 25088331
Alignment:
Q  522 ctctgcataaattatgcaatgtccctgtcaattgagttatgcttacggggac 573  Q
    ||||||||||||||||||||||||||  ||| | ||||| ||||||||||||    
T  25088280 ctctgcataaattatgcaatgtccctaccaactaagttaagcttacggggac 25088331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 474 - 545
Target Start/End: Complemental strand, 33882727 - 33882656
Alignment:
Q  474 acacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtcc 545  Q
    |||||||||||   |||| |||||||||| ||| ||||| |||||  ||||||||||||||| |||||||||    
T  33882727 acacatttaaacagggaggagtggggtgttcggggttcagatctcagcctctgcataaattacgcaatgtcc 33882656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 519 - 557
Target Start/End: Complemental strand, 7771338 - 7771300
Alignment:
Q  519 gacctctgcataaattatgcaatgtccctgtcaattgag 557  Q
    |||| ||||||||||||||||||||||||||||| ||||    
T  7771338 gacccctgcataaattatgcaatgtccctgtcaactgag 7771300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 447 - 572
Target Start/End: Complemental strand, 31802177 - 31802051
Alignment:
Q  447 ggtctagtagtctattggtcggagctcacaca-tttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtcc 545  Q
    |||| ||||||||| |||   ||||||||||| ||||| ||||||||||||| |||||||| |||| || | || |  ||||||| | |||||||| |||    
T  31802177 ggtcaagtagtctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggggttcgaaccccggctcctgcatataatatgcaatatcc 31802078  T
Q  546 ctgtcaattgagttatgcttacgggga 572  Q
    ||  ||| ||||||| ||| |||||||    
T  31802077 ctaccaactgagttaagctcacgggga 31802051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 479 - 560
Target Start/End: Complemental strand, 361254 - 361173
Alignment:
Q  479 tttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagtta 560  Q
    ||||||| ||||||||||||||||| ||||||| || |||| |  ||||||| | |||||||| |||||  ||| |||||||    
T  361254 tttaaatatggagaagtggggtgtctggagttcgaacctcggctcctgcatataatatgcaatatccctaccaactgagtta 361173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 467 - 511
Target Start/End: Complemental strand, 2711534 - 2711489
Alignment:
Q  467 ggagctcaca-catttaaatgtggagaagtggggtgtccggagttc 511  Q
    |||||||||| | |||||||| ||||||||||||||||||||||||    
T  2711534 ggagctcacaacttttaaatgcggagaagtggggtgtccggagttc 2711489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 478 - 547
Target Start/End: Complemental strand, 3294856 - 3294787
Alignment:
Q  478 atttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccct 547  Q
    |||||| |||| ||||||||||||||||| |||| || | ||||| ||||||| | |||||||| |||||    
T  3294856 atttaattgtgaagaagtggggtgtccggggttcgaaccccgacccctgcatataatatgcaatatccct 3294787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 468 - 572
Target Start/End: Complemental strand, 8297730 - 8297625
Alignment:
Q  468 gagctcacaca-tttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagttatgctta 566  Q
    ||||||||||| ||||| |||||||||||||||||||||| |||| || | || || ||||||| |  ||||||  |||||  |||||||| || ||| |    
T  8297730 gagctcacacaatttaattgtggagaagtggggtgtccggggttcgaaccccggcccctgcatataacatgcaacatccctaccaattgagctaagctca 8297631  T
Q  567 cgggga 572  Q
    ||||||    
T  8297630 cgggga 8297625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 517 - 570
Target Start/End: Complemental strand, 16179074 - 16179021
Alignment:
Q  517 tcgacctctgcataaattatgcaatgtccctgtcaattgagttatgcttacggg 570  Q
    |||| |||||||||||||||||||||||| |  ||||||||||| ||| |||||    
T  16179074 tcgagctctgcataaattatgcaatgtccataccaattgagttaagctcacggg 16179021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 467 - 503
Target Start/End: Complemental strand, 28021336 - 28021299
Alignment:
Q  467 ggagctcacacatt-taaatgtggagaagtggggtgtc 503  Q
    |||||||||||||| |||||||||||||||||||||||    
T  28021336 ggagctcacacattataaatgtggagaagtggggtgtc 28021299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 471 - 536
Target Start/End: Complemental strand, 31952368 - 31952303
Alignment:
Q  471 ctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattat 536  Q
    |||| ||| |||| |||||||||||||||||||||| |||| || | | ||| |||||||||||||    
T  31952368 ctcatacaattaattgtggagaagtggggtgtccggggttcgaaccccaacccctgcataaattat 31952303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 467 - 503
Target Start/End: Original strand, 32621548 - 32621585
Alignment:
Q  467 ggagctcacacattt-aaatgtggagaagtggggtgtc 503  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  32621548 ggagctcacacattttaaatgtggagaagtggggtgtc 32621585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 468 - 547
Target Start/End: Complemental strand, 33646938 - 33646857
Alignment:
Q  468 gagctcacaca-tttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcata-aattatgcaatgtccct 547  Q
    ||||||||||| ||||| |||||||||||||||||||||  |||| || | ||||| ||||||| || |||||||| |||||    
T  33646938 gagctcacacaatttaattgtggagaagtggggtgtccgaggttcgaaccccgacccctgcatataaatatgcaatatccct 33646857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 452 - 511
Target Start/End: Complemental strand, 2426183 - 2426123
Alignment:
Q  452 agtagtctattggtcggagctcacacatttaaat-gtggagaagtggggtgtccggagttc 511  Q
    |||||||||||||   ||||||||||| |||||| |||||||||||| |||||||| ||||    
T  2426183 agtagtctattggctagagctcacacaattaaattgtggagaagtggagtgtccggggttc 2426123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 468 - 547
Target Start/End: Original strand, 2500481 - 2500561
Alignment:
Q  468 gagctcacaca-tttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccct 547  Q
    ||||||||||| ||||| ||||||||||||| ||||||||| ||| ||   |||||||| |||| | |||||||| |||||    
T  2500481 gagctcacacaatttaattgtggagaagtggagtgtccggaattcgaactccgacctctacatataatatgcaatatccct 2500561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 468 - 556
Target Start/End: Original strand, 3298935 - 3299023
Alignment:
Q  468 gagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattga 556  Q
    |||||||||||||||||| |||||||||||| ||| ||  |||| |||  ||||| |||||||   |||||||| |||||  |||||||    
T  3298935 gagctcacacatttaaatatggagaagtgggatgttcgaggttcgaattccgacccctgcatattatatgcaatatccctaccaattga 3299023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 487 - 539
Target Start/End: Original strand, 7897105 - 7897157
Alignment:
Q  487 tggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgca 539  Q
    |||||||||||||||||||| |||| || | ||||| ||||||| ||||||||    
T  7897105 tggagaagtggggtgtccggggttcgaaccccgacccctgcatatattatgca 7897157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 468 - 511
Target Start/End: Original strand, 13158676 - 13158720
Alignment:
Q  468 gagctcacaca-tttaaatgtggagaagtggggtgtccggagttc 511  Q
    ||||||||||| ||||| |||||||||||||||||||||| ||||    
T  13158676 gagctcacacaatttaattgtggagaagtggggtgtccggggttc 13158720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 468 - 511
Target Start/End: Original strand, 13163532 - 13163576
Alignment:
Q  468 gagctcacaca-tttaaatgtggagaagtggggtgtccggagttc 511  Q
    ||||||||||| ||||| |||||||||||||||||||||| ||||    
T  13163532 gagctcacacaatttaattgtggagaagtggggtgtccggggttc 13163576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 483 - 539
Target Start/End: Complemental strand, 13656353 - 13656297
Alignment:
Q  483 aatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgca 539  Q
    |||||| |||||||||||||| || |||||||  |||||| ||||||| ||||||||    
T  13656353 aatgtgaagaagtggggtgtctggggttcaaacatcgacccctgcatatattatgca 13656297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 468 - 511
Target Start/End: Complemental strand, 30705063 - 30705019
Alignment:
Q  468 gagctcacaca-tttaaatgtggagaagtggggtgtccggagttc 511  Q
    ||||||||||| ||||| |||||||||||||||||||||| ||||    
T  30705063 gagctcacacaatttaattgtggagaagtggggtgtccggggttc 30705019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 467 - 574
Target Start/End: Original strand, 32670020 - 32670128
Alignment:
Q  467 ggagctcacacatt-taaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagttatgctt 565  Q
    |||||||||||||| ||||| ||||||||| ||||||| || |||| || | |  || |||||||||||||||||| | |||  |||||||| || |||     
T  32670020 ggagctcacacattataaatatggagaagtagggtgtcaggggttcgaacccctgcccctgcataaattatgcaatattcctaccaattgagctaagctc 32670119  T
Q  566 acggggaca 574  Q
    | |||||||    
T  32670120 aaggggaca 32670128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 51; Significance: 6e-20; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 447 - 557
Target Start/End: Complemental strand, 24503 - 24393
Alignment:
Q  447 ggtctagtagtctattggtcggagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccc 546  Q
    |||||||||| ||| |||   ||||||||||||||||||||| |||||||| |||||||| |||| || | || || |||||||||||||||||| ||||    
T  24503 ggtctagtagcctagtggctagagctcacacatttaaatgtgaagaagtggagtgtccggggttcgaaccccggcccctgcataaattatgcaatatccc 24404  T
Q  547 tgtcaattgag 557  Q
    || ||||||||    
T  24403 tgccaattgag 24393  T

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Target: scaffold0154 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 467 - 567
Target Start/End: Original strand, 28788 - 28888
Alignment:
Q  467 ggagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagttatgctta 566  Q
    |||||||||||| ||||||||||||||||||||||||||| |||| || | || || ||||||||| |||| ||||||||| |||| |||| || |||||    
T  28788 ggagctcacacaattaaatgtggagaagtggggtgtccggggttcgaaccccggcccctgcataaagtatgtaatgtccctatcaactgagctaagctta 28887  T
Q  567 c 567  Q
    |    
T  28888 c 28888  T

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Target: scaffold0009 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 468 - 575
Target Start/End: Original strand, 41621 - 41722
Alignment:
Q  468 gagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagttatgcttac 567  Q
    ||||||||||||||||| ||||||||||||||||||||| |||| |      ||| ||||||||||||||||||||||||| |||||||| || ||| ||    
T  41621 gagctcacacatttaaacgtggagaagtggggtgtccggggttcga------acccctgcataaattatgcaatgtccctgccaattgagctaagctcac 41714  T
Q  568 ggggacag 575  Q
    ||| ||||    
T  41715 gggaacag 41722  T

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Target: scaffold0519 (Bit Score: 46; Significance: 6e-17; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 468 - 557
Target Start/End: Original strand, 2930 - 3019
Alignment:
Q  468 gagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgag 557  Q
    ||||||||||| |||| ||| |||||||||||||||||| |||| || | || || |||||||||||||||||||||||| |||| ||||    
T  2930 gagctcacacaattaattgtcgagaagtggggtgtccggggttcgaaccccggcccctgcataaattatgcaatgtccctttcaactgag 3019  T

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Target: scaffold0250 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 468 - 547
Target Start/End: Complemental strand, 15107 - 15028
Alignment:
Q  468 gagctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccct 547  Q
    ||||||||| | |||||||||||||||||||||||  || |||| || |  |||| ||||||||||||||||||||||||    
T  15107 gagctcacataattaaatgtggagaagtggggtgtttggggttcgaaccatgacccctgcataaattatgcaatgtccct 15028  T

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Target: scaffold0264 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 471 - 548
Target Start/End: Complemental strand, 20376 - 20299
Alignment:
Q  471 ctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctg 548  Q
    ||||| || ||||||||||| ||||||||| ||||| |||| || ||||| |  ||||||||||||||||||||||||    
T  20376 ctcacgcaattaaatgtggataagtggggtatccggggttcgaacctcgatccatgcataaattatgcaatgtccctg 20299  T

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Target: scaffold0010 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 469 - 547
Target Start/End: Original strand, 236326 - 236402
Alignment:
Q  469 agctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccct 547  Q
    ||||||||||||| |||||||| ||||||||||||||| |||| || | ||||| ||||||||  |||||||| |||||    
T  236326 agctcacacattttaatgtggataagtggggtgtccggggttcgaaccccgacccctgcataa--tatgcaatatccct 236402  T

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Target: scaffold0088 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 468 - 572
Target Start/End: Original strand, 10793 - 10898
Alignment:
Q  468 gagctcacaca-tttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattgagttatgctta 566  Q
    ||||||||||| ||||| |||||||||||||||||||||| |||| || | || || ||||||| | |||||||| |||||  ||| |||| || ||| |    
T  10793 gagctcacacaatttaattgtggagaagtggggtgtccggggttcgaaccccggcccctgcatataatatgcaatatccctaccaactgagctaagctca 10892  T
Q  567 cgggga 572  Q
    ||||||    
T  10893 cgggga 10898  T

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Target: scaffold0014 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 469 - 541
Target Start/End: Original strand, 197059 - 197131
Alignment:
Q  469 agctcacacatttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaat 541  Q
    |||||||||  |||| |||||| |||| ||||||| ||||||| |||  ||||| ||||||||||||||||||    
T  197059 agctcacacgattaattgtggataagtagggtgtctggagttcgaattccgaccactgcataaattatgcaat 197131  T

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Target: scaffold0999 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0999
Description:

Target: scaffold0999; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 472 - 506
Target Start/End: Complemental strand, 2273 - 2239
Alignment:
Q  472 tcacacatttaaatgtggagaagtggggtgtccgg 506  Q
    ||||||||||||||||||||||||| |||||||||    
T  2273 tcacacatttaaatgtggagaagtgaggtgtccgg 2239  T

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Target: scaffold0031 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 478 - 511
Target Start/End: Original strand, 93960 - 93993
Alignment:
Q  478 atttaaatgtggagaagtggggtgtccggagttc 511  Q
    |||||| |||||||||||||||||||||||||||    
T  93960 atttaattgtggagaagtggggtgtccggagttc 93993  T

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Target: scaffold1005 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold1005
Description:

Target: scaffold1005; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 468 - 504
Target Start/End: Complemental strand, 2934 - 2898
Alignment:
Q  468 gagctcacacatttaaatgtggagaagtggggtgtcc 504  Q
    ||||||||||| ||||||||||||||||| |||||||    
T  2934 gagctcacacaattaaatgtggagaagtgaggtgtcc 2898  T

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Target: scaffold0157 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 468 - 547
Target Start/End: Complemental strand, 15867 - 15787
Alignment:
Q  468 gagctcacaca-tttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccct 547  Q
    ||||||||||| ||||| ||||||||||||| || ||||| |||| || ||||||  ||||||| | |||||||| |||||    
T  15867 gagctcacacaatttaattgtggagaagtggagtatccggggttcgaacctcgactcctgcatataatatgcaatatccct 15787  T

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Target: scaffold0117 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 468 - 511
Target Start/End: Original strand, 18446 - 18490
Alignment:
Q  468 gagctcacaca-tttaaatgtggagaagtggggtgtccggagttc 511  Q
    ||||||||||| ||||| |||||||||||||||||||||| ||||    
T  18446 gagctcacacaatttaattgtggagaagtggggtgtccggggttc 18490  T

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Target: scaffold0078 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 480 - 556
Target Start/End: Original strand, 20424 - 20500
Alignment:
Q  480 ttaaatgtggagaagtggggtgtccggagttcaaatctcgacctctgcataaattatgcaatgtccctgtcaattga 556  Q
    |||||||||||||||| |  |||| || |||| || |  | ||||||||||||||||||||||| ||||| ||||||    
T  20424 ttaaatgtggagaagtagcatgtctggggttcgaaccgtggcctctgcataaattatgcaatgttcctgtaaattga 20500  T

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