View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20701_high_14 (Length: 241)
Name: NF20701_high_14
Description: NF20701
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20701_high_14 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 17 - 241
Target Start/End: Original strand, 30020375 - 30020599
Alignment:
| Q |
17 |
atgttcagcgccattcactattgctatgttatcatcaggagcaaagagcaacactttcttcttggaaatcaatttcaagattatgtgtggaatattcttt |
116 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30020375 |
atgttcagcgccattcactattgctatgttatcatcaggagcaaagagcaacactttcttcttggaaatcaatttcaagattatgtgtggaatattcttt |
30020474 |
T |
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| Q |
117 |
attgacttctgaggaagcttcaggttggaatttcttagaaaaatccgtatcgttttcctcatccatctctaccactacgaaactaatgctctttgcatga |
216 |
Q |
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|||||| |||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30020475 |
attgacctctgaggaagcttcgggttggaatttcttagaaaaatgcgtatcgttttcctcatccatctctaccactacgaaactaatgctctttgcatga |
30020574 |
T |
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| Q |
217 |
tctagaataaaaggctcatcacata |
241 |
Q |
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||||||||||||||||||||||||| |
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| T |
30020575 |
tctagaataaaaggctcatcacata |
30020599 |
T |
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