View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20702_high_34 (Length: 202)
Name: NF20702_high_34
Description: NF20702
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20702_high_34 |
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Alignment Details
Target: chr4 (Bit Score: 163; Significance: 3e-87; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 16 - 186
Target Start/End: Complemental strand, 30551064 - 30550894
Alignment:
| Q |
16 |
aattctggaagtggagaagaggaagagattgttaatgtagcaagtgttgagcaagagatatcaaatgaatcaacttcagaaattaagaatgttgaggaaa |
115 |
Q |
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| T |
30551064 |
aattctggaagtggagaagaggaagagattgttaatgtagcgagtgttgagcaagagatatcaagtgaatcaacttcagaaattaagaatgttgaggaaa |
30550965 |
T |
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| Q |
116 |
ataatggtaagatcatcaccagaggaatctatgacggtgagatctcctttggagtttatgtgggtagtagt |
186 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30550964 |
ataatggtaagatcatcaccagaggaatctatgacggtgagatctcctttggagtttatgtgggtagtagt |
30550894 |
T |
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