View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20702_low_8 (Length: 426)

Name: NF20702_low_8
Description: NF20702
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20702_low_8
NF20702_low_8
[»] chr5 (39 HSPs)
chr5 (53-375)||(38834824-38835146)
chr5 (1-84)||(31588357-31588437)
chr5 (1-83)||(87272-87350)
chr5 (1-83)||(8750371-8750449)
chr5 (358-410)||(38835160-38835212)
chr5 (1-84)||(31176507-31176586)
chr5 (1-84)||(18999651-18999730)
chr5 (1-84)||(18999366-18999445)
chr5 (1-84)||(87019-87098)
chr5 (3-91)||(15978382-15978467)
chr5 (1-84)||(18340661-18340740)
chr5 (1-84)||(22231171-22231250)
chr5 (1-84)||(30415495-30415573)
chr5 (1-84)||(119184-119263)
chr5 (1-46)||(3935705-3935750)
chr5 (1-83)||(16284275-16284353)
chr5 (1-84)||(39402212-39402290)
chr5 (1-91)||(3191791-3191876)
chr5 (1-45)||(18339108-18339152)
chr5 (1-86)||(21949398-21949478)
chr5 (1-84)||(8750010-8750089)
chr5 (1-39)||(21949842-21949880)
chr5 (1-38)||(5747203-5747240)
chr5 (1-38)||(6543456-6543493)
chr5 (1-84)||(19353080-19353159)
chr5 (2-83)||(20892557-20892633)
chr5 (1-38)||(28641603-28641640)
chr5 (1-84)||(31093438-31093516)
chr5 (1-38)||(31162462-31162499)
chr5 (2-43)||(37813412-37813453)
chr5 (2-35)||(38834790-38834823)
chr5 (2-46)||(30351716-30351760)
chr5 (1-44)||(119795-119838)
chr5 (5-44)||(4186790-4186829)
chr5 (1-36)||(14626100-14626135)
chr5 (1-44)||(19352507-19352550)
chr5 (1-38)||(3192242-3192279)
chr5 (1-38)||(6543857-6543894)
chr5 (1-38)||(28641202-28641239)
[»] chr2 (34 HSPs)
chr2 (1-84)||(21267379-21267458)
chr2 (1-84)||(21217332-21217411)
chr2 (1-84)||(21264991-21265070)
chr2 (1-84)||(2191217-2191296)
chr2 (1-84)||(2517413-2517492)
chr2 (1-84)||(24093156-24093235)
chr2 (2-84)||(21182307-21182385)
chr2 (1-84)||(3691400-3691479)
chr2 (1-84)||(21216923-21217002)
chr2 (1-84)||(21265400-21265479)
chr2 (1-81)||(7083525-7083601)
chr2 (1-84)||(32114166-32114244)
chr2 (2-44)||(3624925-3624967)
chr2 (1-43)||(3691120-3691162)
chr2 (1-84)||(10709475-10709554)
chr2 (1-38)||(1804273-1804310)
chr2 (1-38)||(1804674-1804711)
chr2 (1-84)||(3854509-3854587)
chr2 (1-38)||(6476128-6476165)
chr2 (1-38)||(6476529-6476566)
chr2 (1-38)||(11451198-11451235)
chr2 (1-38)||(27377690-27377727)
chr2 (1-84)||(39947097-39947176)
chr2 (5-44)||(23221870-23221909)
chr2 (1-44)||(39945878-39945921)
chr2 (1-39)||(2036614-2036652)
chr2 (49-83)||(2606695-2606729)
chr2 (1-43)||(24093567-24093609)
chr2 (1-84)||(32860814-32860893)
chr2 (1-38)||(12090137-12090174)
chr2 (2-43)||(18105753-18105794)
chr2 (2-39)||(32114483-32114520)
chr2 (1-38)||(34037850-34037887)
chr2 (1-38)||(39096565-39096602)
[»] chr4 (50 HSPs)
chr4 (1-84)||(51906830-51906909)
chr4 (1-84)||(3296955-3297034)
chr4 (1-83)||(3296544-3296622)
chr4 (2-84)||(7118176-7118254)
chr4 (1-84)||(29691525-29691604)
chr4 (1-84)||(48553896-48553975)
chr4 (1-84)||(54142325-54142404)
chr4 (1-85)||(10580039-10580119)
chr4 (1-84)||(17288384-17288463)
chr4 (1-43)||(34129311-34129353)
chr4 (5-84)||(51906420-51906495)
chr4 (1-44)||(1791184-1791227)
chr4 (4-85)||(1791389-1791466)
chr4 (1-44)||(30608644-30608687)
chr4 (1-40)||(30953012-30953051)
chr4 (1-44)||(38759740-38759783)
chr4 (1-44)||(54143512-54143555)
chr4 (1-43)||(30608282-30608324)
chr4 (1-43)||(34294488-34294529)
chr4 (1-39)||(40841502-40841540)
chr4 (1-39)||(40841904-40841942)
chr4 (1-84)||(41510068-41510147)
chr4 (1-39)||(55347980-55348018)
chr4 (1-38)||(2669048-2669085)
chr4 (1-38)||(2669449-2669486)
chr4 (1-38)||(12108300-12108337)
chr4 (1-38)||(12922683-12922720)
chr4 (2-43)||(25917050-25917091)
chr4 (1-38)||(28957753-28957790)
chr4 (1-38)||(38026118-38026155)
chr4 (1-84)||(43980000-43980078)
chr4 (1-84)||(54167494-54167573)
chr4 (1-45)||(56106472-56106516)
chr4 (1-36)||(21235472-21235507)
chr4 (1-44)||(26984180-26984223)
chr4 (2-45)||(34129029-34129072)
chr4 (1-43)||(48760126-48760168)
chr4 (51-84)||(1791321-1791354)
chr4 (2-43)||(5544821-5544862)
chr4 (1-38)||(28505250-28505287)
chr4 (1-38)||(28957352-28957389)
chr4 (1-38)||(31227920-31227957)
chr4 (1-38)||(31228321-31228358)
chr4 (1-38)||(55347602-55347639)
chr4 (2-84)||(1317504-1317581)
chr4 (4-44)||(3296753-3296793)
chr4 (52-84)||(19310787-19310819)
chr4 (1-45)||(30048027-30048071)
chr4 (1-45)||(30062368-30062412)
chr4 (4-44)||(35166708-35166748)
[»] chr3 (40 HSPs)
chr3 (1-84)||(9218524-9218603)
chr3 (1-84)||(132070-132149)
chr3 (1-44)||(9217856-9217899)
chr3 (1-44)||(51755925-51755968)
chr3 (1-84)||(13637791-13637870)
chr3 (1-84)||(22814296-22814375)
chr3 (1-84)||(25770321-25770400)
chr3 (1-84)||(43933440-43933519)
chr3 (1-84)||(44504397-44504476)
chr3 (1-84)||(51471335-51471414)
chr3 (8-84)||(45728335-45728407)
chr3 (1-85)||(25770493-25770573)
chr3 (1-43)||(44504129-44504171)
chr3 (1-84)||(48868598-48868677)
chr3 (1-84)||(4199897-4199975)
chr3 (2-82)||(25770728-25770804)
chr3 (1-81)||(37172084-37172160)
chr3 (1-39)||(45539249-45539287)
chr3 (1-39)||(45539651-45539689)
chr3 (1-80)||(50732229-50732304)
chr3 (1-80)||(50780551-50780626)
chr3 (2-44)||(54588493-54588535)
chr3 (1-84)||(27475390-27475468)
chr3 (1-84)||(34949756-34949834)
chr3 (1-38)||(36899295-36899332)
chr3 (1-38)||(36899696-36899733)
chr3 (1-38)||(42606321-42606358)
chr3 (1-38)||(46689723-46689760)
chr3 (5-83)||(27013583-27013657)
chr3 (1-44)||(38485733-38485776)
chr3 (17-84)||(26741327-26741390)
chr3 (1-84)||(34743481-34743560)
chr3 (1-84)||(37172487-37172566)
chr3 (1-38)||(2388673-2388710)
chr3 (1-38)||(2389074-2389111)
chr3 (1-46)||(33225522-33225567)
chr3 (1-83)||(33226933-33227011)
chr3 (1-38)||(42606722-42606759)
chr3 (1-38)||(46690124-46690161)
chr3 (1-41)||(27013448-27013488)
[»] chr7 (32 HSPs)
chr7 (1-91)||(32092221-32092307)
chr7 (1-84)||(17075628-17075707)
chr7 (1-76)||(22948889-22948960)
chr7 (1-84)||(17075219-17075298)
chr7 (2-83)||(44803644-44803721)
chr7 (1-84)||(18443620-18443698)
chr7 (1-82)||(11974666-11974743)
chr7 (1-45)||(20543946-20543990)
chr7 (1-45)||(42750129-42750173)
chr7 (4-83)||(5029767-5029842)
chr7 (1-43)||(20544321-20544363)
chr7 (2-44)||(27311060-27311102)
chr7 (8-45)||(6621133-6621170)
chr7 (1-84)||(30939575-30939654)
chr7 (1-40)||(27310087-27310126)
chr7 (1-83)||(28838356-28838431)
chr7 (1-84)||(18152756-18152835)
chr7 (1-84)||(28852693-28852772)
chr7 (1-84)||(1244454-1244532)
chr7 (1-84)||(10466790-10466869)
chr7 (1-84)||(28898029-28898107)
chr7 (2-39)||(33848309-33848346)
chr7 (1-84)||(41298687-41298765)
chr7 (1-87)||(18443173-18443254)
chr7 (2-84)||(29783935-29784012)
chr7 (1-44)||(16755644-16755687)
chr7 (1-32)||(32092540-32092571)
chr7 (1-44)||(49053892-49053935)
chr7 (1-84)||(12933072-12933151)
chr7 (1-39)||(28854718-28854756)
chr7 (1-38)||(22954087-22954124)
chr7 (1-38)||(33847907-33847944)
[»] chr8 (28 HSPs)
chr8 (1-84)||(13315202-13315281)
chr8 (2-81)||(16662483-16662558)
chr8 (1-83)||(6297463-6297541)
chr8 (1-84)||(6298046-6298125)
chr8 (2-84)||(16662168-16662246)
chr8 (1-82)||(26720323-26720400)
chr8 (1-81)||(26243406-26243482)
chr8 (1-84)||(17914197-17914276)
chr8 (1-44)||(6297873-6297916)
chr8 (1-43)||(12489265-12489307)
chr8 (1-84)||(26997880-26997959)
chr8 (2-84)||(10047479-10047556)
chr8 (1-84)||(12489538-12489616)
chr8 (1-84)||(29917105-29917183)
chr8 (1-45)||(9800354-9800398)
chr8 (1-45)||(21006133-21006177)
chr8 (1-85)||(21005960-21006040)
chr8 (1-84)||(9800039-9800118)
chr8 (1-84)||(4624533-4624612)
chr8 (1-83)||(44148578-44148656)
chr8 (1-85)||(7344867-7344947)
chr8 (1-44)||(20682744-20682787)
chr8 (1-44)||(36155307-36155350)
chr8 (1-43)||(44024262-44024304)
chr8 (1-38)||(29917549-29917586)
chr8 (2-84)||(44803575-44803653)
chr8 (2-38)||(22601540-22601576)
chr8 (2-38)||(24846004-24846040)
[»] chr6 (22 HSPs)
chr6 (1-84)||(211441-211520)
chr6 (1-84)||(5974011-5974090)
chr6 (1-84)||(4510188-4510267)
chr6 (1-84)||(8710351-8710430)
chr6 (13-84)||(17157856-17157923)
chr6 (2-83)||(7645994-7646071)
chr6 (1-43)||(20522167-20522209)
chr6 (1-84)||(34984555-34984633)
chr6 (2-42)||(21113067-21113107)
chr6 (7-84)||(211738-211811)
chr6 (1-85)||(14712829-14712909)
chr6 (8-83)||(14713024-14713095)
chr6 (1-38)||(14257188-14257225)
chr6 (1-38)||(14257589-14257626)
chr6 (1-42)||(17157584-17157625)
chr6 (1-38)||(20824205-20824242)
chr6 (1-84)||(33107372-33107450)
chr6 (1-83)||(6162699-6162776)
chr6 (16-84)||(25932083-25932147)
chr6 (1-39)||(19595660-19595698)
chr6 (1-38)||(15147759-15147796)
chr6 (1-38)||(20824606-20824643)
[»] chr1 (36 HSPs)
chr1 (1-84)||(1500992-1501071)
chr1 (1-84)||(5172745-5172824)
chr1 (1-84)||(9880484-9880563)
chr1 (1-85)||(5683160-5683240)
chr1 (1-84)||(3591348-3591427)
chr1 (3-84)||(19895400-19895477)
chr1 (1-45)||(47541553-47541597)
chr1 (1-43)||(5683572-5683614)
chr1 (1-46)||(12869665-12869710)
chr1 (1-84)||(36793585-36793664)
chr1 (1-83)||(48155290-48155368)
chr1 (1-44)||(18180289-18180332)
chr1 (1-40)||(50359165-50359204)
chr1 (1-39)||(1500100-1500138)
chr1 (1-85)||(3591175-3591255)
chr1 (1-84)||(45664687-45664766)
chr1 (1-84)||(6751364-6751444)
chr1 (1-38)||(8997382-8997419)
chr1 (1-84)||(17968037-17968115)
chr1 (2-43)||(19895812-19895853)
chr1 (2-84)||(31436395-31436473)
chr1 (1-38)||(32266524-32266561)
chr1 (1-38)||(40124117-40124154)
chr1 (1-84)||(45230572-45230650)
chr1 (1-38)||(47410464-47410501)
chr1 (1-38)||(47410865-47410902)
chr1 (1-84)||(18179879-18179958)
chr1 (1-39)||(48155014-48155052)
chr1 (1-43)||(50359450-50359492)
chr1 (1-38)||(9122726-9122763)
chr1 (1-38)||(9123127-9123164)
chr1 (2-84)||(9880802-9880880)
chr1 (1-46)||(12868467-12868512)
chr1 (1-38)||(32266925-32266962)
chr1 (1-38)||(40124518-40124555)
chr1 (1-38)||(46802363-46802400)
[»] scaffold0063 (1 HSPs)
scaffold0063 (1-83)||(35203-35281)
[»] scaffold0009 (3 HSPs)
scaffold0009 (1-84)||(107722-107801)
scaffold0009 (1-82)||(108133-108210)
scaffold0009 (1-85)||(107894-107974)
[»] scaffold0085 (2 HSPs)
scaffold0085 (1-38)||(39863-39900)
scaffold0085 (1-38)||(39462-39499)


Alignment Details
Target: chr5 (Bit Score: 311; Significance: 1e-175; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 311; E-Value: 1e-175
Query Start/End: Original strand, 53 - 375
Target Start/End: Original strand, 38834824 - 38835146
Alignment:
Q  53 gcaaaacgtaaggactaaaaacatatttaacctataaaattatcatagtggctcccttcaagaataatcaacacctgctttaacaatatatgcaggcaag 152  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  38834824 gcaaaacgtaaggactaaaaatatatttaacctataaaattatcatagtggctcccttcaagaataatcaacacctgctttaacaatatatgcaggcagg 38834923  T
Q  153 ctgaggcactatttttagtcccattcgataaatatggttaaaacatgctttcctataaaagaacatcctttagaaacatgagcttttcgggaggatggtg 252  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38834924 ctgaggcactatttttagtcccattcgataaatatggttaaaacatgctttcctataaaagaacatcctttagaaacatgagcttttcgggaggatggtg 38835023  T
Q  253 acatggtcgatagatttatcagagaaagaaagggaagacactataaaaatagtataagagaaaaatttcactccaaaatcattcaaatccagttttttat 352  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38835024 acatggtcgatagatttatcagagaaagaaagggaaggcactataaaaatagtataagagaaaaatttcactccaaaatcattcaaatccagttttttat 38835123  T
Q  353 atgctaagcttgctttgacaact 375  Q
    |||||||||||||||||||||||    
T  38835124 atgctaagcttgctttgacaact 38835146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 31588357 - 31588437
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 84  Q
    ||||||||||| |||||||||||||||||||||||||||||||||   | |||||||| |||||||||||||||||||||||||    
T  31588357 gattttaaaaatatttaatgaaatgtagggactattcttcaaagg---ggacgcaaaatgtaaggactaaaaacatatttaacc 31588437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 87272 - 87350
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaac 83  Q
    ||||||||||||||||||||||||||||||||||||||||||||    | || |||||  |||||||||||||||||||||||    
T  87272 gattttaaaaacatttaatgaaatgtagggactattcttcaaag----ggacacaaaatataaggactaaaaacatatttaac 87350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 8750371 - 8750449
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaac 83  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||     ||||||||| ||||||||||||||||||||||||    
T  8750371 gattttaaacacatttaataaaatgtagggactattcttcaaag----aaacgcaaaatgtaaggactaaaaacatatttaac 8750449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 358 - 410
Target Start/End: Original strand, 38835160 - 38835212
Alignment:
Q  358 aagcttgctttgacaactaatgtaattatataaaccaatagtaacgtgcatgc 410  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  38835160 aagcttgctttgacaactaatgtaattatgtaaaccaatagtaacgtgcatgc 38835212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 31176586 - 31176507
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 84  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||     ||||||||  ||||||||||||||||||||||||    
T  31176586 gattttaaaaacatttaatgaaatgtatggactgttcttcaaaggg----acgcaaaatataaggactaaaaacatatttaacc 31176507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 18999651 - 18999730
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 84  Q
    ||||||||||| ||||||||||||||| |||||||||||||||  || ||| |||||| |||||||||||||||||||||||||    
T  18999651 gattttaaaaatatttaatgaaatgtatggactattcttcaaa--at-gaa-gcaaaatgtaaggactaaaaacatatttaacc 18999730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 18999445 - 18999366
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 84  Q
    ||||||||||| ||||||||||||||| |||||||||||||||     ||  |||||| |||||||||||||||||||||||||    
T  18999445 gattttaaaaatatttaatgaaatgtatggactattcttcaaa----agagtgcaaaatgtaaggactaaaaacatatttaacc 18999366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 87098 - 87019
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 84  Q
    ||||||||||||||||||||||||||||||  |||||||||   ||| ||||||||||  ||| ||||||||||||||||||||    
T  87098 gattttaaaaacatttaatgaaatgtaggggttattcttca---gat-gaacgcaaaatataaagactaaaaacatatttaacc 87019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 3 - 91
Target Start/End: Complemental strand, 15978467 - 15978382
Alignment:
Q  3 ttttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacctataaaa 91  Q
    |||||||||||||||||||||| ||| ||||||||||| ||  |   ||| |||||  |||||||||||||||||||||||||| ||||    
T  15978467 ttttaaaaacatttaatgaaatatagagactattcttccaaaaa---aacacaaaatataaggactaaaaacatatttaacctaaaaaa 15978382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 18340661 - 18340740
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 84  Q
    ||||||||||||||||||||||||||| ||||||||||| ||||    |  ||||| | ||||||||||||| |||||||||||    
T  18340661 gattttaaaaacatttaatgaaatgtaaggactattcttaaaag----gggcgcaacatgtaaggactaaaatcatatttaacc 18340740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 22231171 - 22231250
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 84  Q
    ||||| |||||||||||||||||| |||||||||||||| ||||    |  |||||||  ||||||||||||||||||||||||    
T  22231171 gatttcaaaaacatttaatgaaatatagggactattctttaaag----gggcgcaaaatataaggactaaaaacatatttaacc 22231250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 30415495 - 30415573
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 84  Q
    ||||||||||||||| |||||||||||||||||||||||| ||||| || |    ||| ||||||||||||| |||||||||||    
T  30415495 gattttaaaaacatt-aatgaaatgtagggactattcttcgaaggagcgta----aaatgtaaggactaaaaccatatttaacc 30415573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 119263 - 119184
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 84  Q
    ||||||||||||||||| ||||||||| ||||||||||| ||||  ||  ||||||||  ||||||| ||||||||||||||||    
T  119263 gattttaaaaacatttattgaaatgtaaggactattctttaaag--tc--acgcaaaatctaaggaccaaaaacatatttaacc 119184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 3935705 - 3935750
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaagga 46  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||    
T  3935705 gattttaaaaacaattaatgaaatgtagggattattcttcaaagga 3935750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 16284353 - 16284275
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaac 83  Q
    ||||||||||||||||||| |||| ||  ||||||||||||||  |    |||||||| ||||||||||||||||||||||||    
T  16284353 gattttaaaaacatttaataaaatataaagactattcttcaaaaaa----acgcaaaatgtaaggactaaaaacatatttaac 16284275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 39402290 - 39402212
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 84  Q
    ||||||||||||||||| ||||||||||||||||||| |||||  ||||  ||||||| ||| |||| ||||||||||||||||    
T  39402290 gattttaaaaacatttattgaaatgtagggactattc-tcaaa--atcg--cgcaaaatgtagggaccaaaaacatatttaacc 39402212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 3191876 - 3191791
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacctataaaa 91  Q
    ||||||||||||||||| ||||||||| ||||||||| |||||  ||||   |||||| ||| ||||||||||||||||||||| ||||||    
T  3191876 gattttaaaaacatttattgaaatgtaaggactattc-tcaaa--atcg--tgcaaaatgtagggactaaaaacatatttaacccataaaa 3191791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 18339152 - 18339108
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaagg 45  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||    
T  18339152 gattttaaaaacatttaatgaaatatagagactattcttcaaagg 18339108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 21949478 - 21949398
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaaccta 86  Q
    ||||||||||||||||| ||||||||||||||||||| |||||  ||||  || |||| ||| |||| ||||||||||||||||||    
T  21949478 gattttaaaaacatttattgaaatgtagggactattc-tcaaa--atcg--cgtaaaatgtagggaccaaaaacatatttaaccta 21949398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 8750089 - 8750010
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 84  Q
    ||||||||||| ||||||||||||||||||| |||| |||||||    |  ||||||| ||||| | |||||||||||||||||    
T  8750089 gattttaaaaatatttaatgaaatgtagggattattattcaaag----gggcgcaaaatgtaagaattaaaaacatatttaacc 8750010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 21949842 - 21949880
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattctt 39  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  21949842 gattttaaaaacatttattgaaatgtagggactattctt 21949880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 5747203 - 5747240
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattct 38  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  5747203 gattttaaaaacatttattgaaatgtagggactattct 5747240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 6543493 - 6543456
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattct 38  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  6543493 gattttaaaaacatttattgaaatgtagggactattct 6543456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 19353080 - 19353159
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 84  Q
    ||||||||||||||||| ||||||||  ||||||||||||||||  ||  || |||||  ||||||| ||||||||||||||||    
T  19353080 gattttaaaaacatttattgaaatgtgaggactattcttcaaag--tc--acacaaaatctaaggaccaaaaacatatttaacc 19353159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 2 - 83
Target Start/End: Original strand, 20892557 - 20892633
Alignment:
Q  2 attttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaac 83  Q
    |||||||||||||||||| ||| |||| |||||||||||||| |     ||||||||  |||||| ||||||||||||||||    
T  20892557 attttaaaaacatttaattaaacgtagagactattcttcaaatg-----acgcaaaatttaaggattaaaaacatatttaac 20892633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 28641603 - 28641640
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattct 38  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  28641603 gattttaaaaacatttattgaaatgtagggactattct 28641640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 31093438 - 31093516
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 84  Q
    ||||||||||||||| | |||||||||||||||||| ||||||  ||||  ||||||| ||| |||| ||||||||||||||||    
T  31093438 gattttaaaaacattcattgaaatgtagggactatt-ttcaaa--atcg--cgcaaaatgtagggaccaaaaacatatttaacc 31093516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 31162499 - 31162462
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattct 38  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  31162499 gattttaaaaacatttattgaaatgtagggactattct 31162462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 37813453 - 37813412
Alignment:
Q  2 attttaaaaacatttaatgaaatgtagggactattcttcaaa 43  Q
    |||||||||||| ||||||||||||| |||||||||||||||    
T  37813453 attttaaaaacacttaatgaaatgtatggactattcttcaaa 37813412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 2 - 35
Target Start/End: Original strand, 38834790 - 38834823
Alignment:
Q  2 attttaaaaacatttaatgaaatgtagggactat 35  Q
    ||||||||||||||||||||||||||||||||||    
T  38834790 attttaaaaacatttaatgaaatgtagggactat 38834823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 30351716 - 30351760
Alignment:
Q  2 attttaaaaacatttaatgaaatgtagggactattcttcaaagga 46  Q
    |||||||||| ||||| ||||||||||||||||||||| ||||||    
T  30351716 attttaaaaatatttattgaaatgtagggactattctttaaagga 30351760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 119795 - 119838
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaag 44  Q
    ||||||||||||||||| ||||||| | ||||||||||||||||    
T  119795 gattttaaaaacatttattgaaatgcaaggactattcttcaaag 119838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 4186829 - 4186790
Alignment:
Q  5 ttaaaaacatttaatgaaatgtagggactattcttcaaag 44  Q
    ||||||||||||| ||||||||||| ||||||||||||||    
T  4186829 ttaaaaacatttattgaaatgtaggtactattcttcaaag 4186790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 14626100 - 14626135
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactatt 36  Q
    ||||||||||||||||| ||||||||||||||||||    
T  14626100 gattttaaaaacatttattgaaatgtagggactatt 14626135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 19352550 - 19352507
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaag 44  Q
    ||||||||||||||||| ||||||| | ||||||||||||||||    
T  19352550 gattttaaaaacatttattgaaatgcaaggactattcttcaaag 19352507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 3192242 - 3192279
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattct 38  Q
    ||||||||||||||||| ||||||||| ||||||||||    
T  3192242 gattttaaaaacatttattgaaatgtaaggactattct 3192279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 6543857 - 6543894
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattct 38  Q
    ||||||||||||||||| ||||||||||||| ||||||    
T  6543857 gattttaaaaacatttattgaaatgtagggattattct 6543894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 28641239 - 28641202
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattct 38  Q
    ||||||||||||||||| ||||||||||||| ||||||    
T  28641239 gattttaaaaacatttattgaaatgtagggattattct 28641202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 59; Significance: 7e-25; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 21267379 - 21267458
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 84  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||    |||| |||||||||||||||||||||||||    
T  21267379 gatttttaaaacatttaatgaaatgtagggactattcttcaaaggatcga----aaaatgtaaggactaaaaacatatttaacc 21267458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 21217332 - 21217411
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 84  Q
    ||||||||||||||||||||||||||||||||||||||||||||   ||  ||||||| |||||||||||||||||||||||||    
T  21217332 gattttaaaaacatttaatgaaatgtagggactattcttcaaag---cg-gcgcaaaatgtaaggactaaaaacatatttaacc 21217411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 21265070 - 21264991
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 84  Q
    ||||||||||||||||||||||||||||||||||||||||||||   ||  ||||||| |||||||||||||||||||||||||    
T  21265070 gattttaaaaacatttaatgaaatgtagggactattcttcaaag---cg-gcgcaaaatgtaaggactaaaaacatatttaacc 21264991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 2191296 - 2191217
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 84  Q
    ||||||||||||||||||||||||||| ||||||||||||||||    |  ||||||| |||||||||||||||||||||||||    
T  2191296 gattttaaaaacatttaatgaaatgtaaggactattcttcaaag----gggcgcaaaatgtaaggactaaaaacatatttaacc 2191217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 2517492 - 2517413
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 84  Q
    ||||||||||||||||||||||||||||||||||||||||||||      |||||||| |||||||||||||| ||||||||||    
T  2517492 gattttaaaaacatttaatgaaatgtagggactattcttcaaag----agacgcaaaatgtaaggactaaaaatatatttaacc 2517413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 24093235 - 24093156
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 84  Q
    ||||||||||||||||||||||||||||||||||||||||||||    |  ||||||  |||||||||||||||||||||||||    
T  24093235 gattttaaaaacatttaatgaaatgtagggactattcttcaaag----gggcgcaaagtgtaaggactaaaaacatatttaacc 24093156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 2 - 84
Target Start/End: Complemental strand, 21182385 - 21182307
Alignment:
Q  2 attttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 84  Q
    |||||||||||||||||||||||||| ||||||||||||||||    |  ||||||| |||||||||||||||||||||||||    
T  21182385 attttaaaaacatttaatgaaatgtaaggactattcttcaaag----gggcgcaaaatgtaaggactaaaaacatatttaacc 21182307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 3691400 - 3691479
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 84  Q
    ||||||||||||||||||||||||||||||||||||||||||||    |  |||||||   |||||||||||||||||||||||    
T  3691400 gattttaaaaacatttaatgaaatgtagggactattcttcaaag----gggcgcaaaatacaaggactaaaaacatatttaacc 3691479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 21217002 - 21216923
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 84  Q
    ||||||||||||||||||||||||||||||||||||||||||||       ||||||| |||||||||||||| ||||||||||    
T  21217002 gattttaaaaacatttaatgaaatgtagggactattcttcaaag----aggcgcaaaatgtaaggactaaaaagatatttaacc 21216923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 21265400 - 21265479
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 84  Q
    ||||||||||||||||||||||||||||||||||||||||||||       ||||||| |||||||||||||| ||||||||||    
T  21265400 gattttaaaaacatttaatgaaatgtagggactattcttcaaag----aggcgcaaaatgtaaggactaaaaagatatttaacc 21265479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 7083601 - 7083525
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatattta 81  Q
    ||||||||||| |||||||||||||||||||||||||||||||     | ||| |||| ||||||| ||||||||||||||    
T  7083601 gattttaaaaaaatttaatgaaatgtagggactattcttcaaa----tggacgtaaaatgtaaggattaaaaacatattta 7083525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 32114244 - 32114166
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 84  Q
    |||||||||||||||||||  | ||||||||||||||||||||||      || |||| |||||||||||||||||||||||||    
T  32114244 gattttaaaaacatttaatagattgtagggactattcttcaaagg-----gcgtaaaatgtaaggactaaaaacatatttaacc 32114166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 3624925 - 3624967
Alignment:
Q  2 attttaaaaacatttaatgaaatgtagggactattcttcaaag 44  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  3624925 attttaaaaacatttattgaaatgtagggactattcttcaaag 3624967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 3691162 - 3691120
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaa 43  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  3691162 gattttaaaaacatttaatgaaatgtaggaactattcttcaaa 3691120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 10709554 - 10709475
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 84  Q
    ||||||||||||||||| ||||||||| |||||||||||||||  |||  ||||||||  ||| ||| ||||||||||||||||    
T  10709554 gattttaaaaacatttattgaaatgtaaggactattcttcaaa--atc--acgcaaaatctaaagaccaaaaacatatttaacc 10709475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 1804310 - 1804273
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattct 38  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  1804310 gattttaaaaacatttattgaaatgtagggactattct 1804273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 1804674 - 1804711
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattct 38  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  1804674 gattttaaaaacatttattgaaatgtagggactattct 1804711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 3854509 - 3854587
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 84  Q
    ||||||||||||||| | ||||||||||||||||||| |||||  ||||  ||||||| ||| |||| ||||||||||||||||    
T  3854509 gattttaaaaacattcattgaaatgtagggactattc-tcaaa--atcg--cgcaaaatgtagggaccaaaaacatatttaacc 3854587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 6476165 - 6476128
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattct 38  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  6476165 gattttaaaaacatttattgaaatgtagggactattct 6476128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 6476529 - 6476566
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattct 38  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  6476529 gattttaaaaacatttattgaaatgtagggactattct 6476566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 11451198 - 11451235
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattct 38  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  11451198 gattttaaaaacatttattgaaatgtagggactattct 11451235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 27377727 - 27377690
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattct 38  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  27377727 gattttaaaaacatttattgaaatgtagggactattct 27377690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 39947097 - 39947176
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 84  Q
    ||||||||||||||||| ||||||||| |||||||| |||||||  ||  || ||||| ||| |||| ||||||||||||||||    
T  39947097 gattttaaaaacatttattgaaatgtaaggactattgttcaaag--tc--actcaaaatgtagggaccaaaaacatatttaacc 39947176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 23221909 - 23221870
Alignment:
Q  5 ttaaaaacatttaatgaaatgtagggactattcttcaaag 44  Q
    ||||||||||||| ||||||||||| ||||||||||||||    
T  23221909 ttaaaaacatttattgaaatgtaggtactattcttcaaag 23221870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 39945921 - 39945878
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaag 44  Q
    ||||||||||||||||| ||||||||| |||||||| |||||||    
T  39945921 gattttaaaaacatttattgaaatgtaaggactattgttcaaag 39945878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 2036614 - 2036652
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattctt 39  Q
    ||||||||||||||| | |||||||||||||||||||||    
T  2036614 gattttaaaaacattaattgaaatgtagggactattctt 2036652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 49 - 83
Target Start/End: Original strand, 2606695 - 2606729
Alignment:
Q  49 gaacgcaaaacgtaaggactaaaaacatatttaac 83  Q
    |||||||||| ||||||||||||||||||||||||    
T  2606695 gaacgcaaaatgtaaggactaaaaacatatttaac 2606729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 24093567 - 24093609
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaa 43  Q
    ||||||||||||||||||| |||| |||| |||||||||||||    
T  24093567 gattttaaaaacatttaataaaatataggcactattcttcaaa 24093609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 32860893 - 32860814
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 84  Q
    |||||||||||||||||||||||| ||  ||||||| ||||||||     ||||||||  ||| | ||||||||||||||||||    
T  32860893 gattttaaaaacatttaatgaaatataacgactatttttcaaaggg----acgcaaaatataaaggctaaaaacatatttaacc 32860814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 12090137 - 12090174
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattct 38  Q
    ||||||||||||||| | ||||||||||||||||||||    
T  12090137 gattttaaaaacattcattgaaatgtagggactattct 12090174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 18105794 - 18105753
Alignment:
Q  2 attttaaaaacatttaatgaaatgtagggactattcttcaaa 43  Q
    ||||||||||| |||| ||||||||||||| |||||||||||    
T  18105794 attttaaaaacctttattgaaatgtagggaatattcttcaaa 18105753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 32114483 - 32114520
Alignment:
Q  2 attttaaaaacatttaatgaaatgtagggactattctt 39  Q
    |||||||||| ||||||||||||||| |||||||||||    
T  32114483 attttaaaaatatttaatgaaatgtaaggactattctt 32114520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 34037887 - 34037850
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattct 38  Q
    ||||||||||||||| | ||||||||||||||||||||    
T  34037887 gattttaaaaacattcattgaaatgtagggactattct 34037850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 39096602 - 39096565
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattct 38  Q
    ||||||||||||||||| ||||||||| ||||||||||    
T  39096602 gattttaaaaacatttattgaaatgtaaggactattct 39096565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 55; Significance: 2e-22; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 51906830 - 51906909
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 84  Q
    ||||||||||||||||||||| ||||||||||||||||||||||    || ||||||| |||||||||||||||||||||||||    
T  51906830 gattttaaaaacatttaatgagatgtagggactattcttcaaag----gagcgcaaaatgtaaggactaaaaacatatttaacc 51906909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 3296955 - 3297034
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 84  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| |    ||||||| |||||||||||||| ||||||||||    
T  3296955 gattttaaaaacatttaatgaaacgtagggactattcttcaaagggt----cgcaaaatgtaaggactaaaaatatatttaacc 3297034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 3296622 - 3296544
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaac 83  Q
    ||||||||||||||||||||||||||||||| ||||||||||||    |  ||||||| ||||||||||||||||||||||||    
T  3296622 gattttaaaaacatttaatgaaatgtagggaatattcttcaaag----gggcgcaaaatgtaaggactaaaaacatatttaac 3296544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 2 - 84
Target Start/End: Original strand, 7118176 - 7118254
Alignment:
Q  2 attttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 84  Q
    |||||||||||||||||||||||||| ||||||||||||||||    |  ||||||| |||||||||||||||||||||||||    
T  7118176 attttaaaaacatttaatgaaatgtatggactattcttcaaag----gggcgcaaaatgtaaggactaaaaacatatttaacc 7118254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 29691604 - 29691525
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaa-ggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 84  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||     ||||||  ||||||||||||||||||||||||    
T  29691604 gattttaaaaacatttaatgaaatgtagggactattcttcaaatggat-----gcaaaatataaggactaaaaacatatttaacc 29691525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 48553975 - 48553896
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 84  Q
    |||||||||||  |||||||||||||| |||||||||||||||||     |||||||| ||||||||||||||| |||||||||    
T  48553975 gattttaaaaaggtttaatgaaatgtatggactattcttcaaaggg----acgcaaaatgtaaggactaaaaacgtatttaacc 48553896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 54142404 - 54142325
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 84  Q
    ||||||||||||||||| ||||||||| ||||||||||||||||  |||  ||||||| ||| ||||||| |||||||||||||    
T  54142404 gattttaaaaacatttattgaaatgtatggactattcttcaaag--tcg--cgcaaaatgtagggactaataacatatttaacc 54142325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 10580119 - 10580039
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacct 85  Q
    ||||||||||||||||| ||||||||| |||||||| |||||||  ||  |||||||| ||| |||| |||||||||||||||||    
T  10580119 gattttaaaaacatttattgaaatgtaaggactatttttcaaag--tc--acgcaaaatgtatggaccaaaaacatatttaacct 10580039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 17288384 - 17288463
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 84  Q
    ||||||||||||||||| |||||||||||||||||| |||||||     | ||||||| ||| ||||||| |||||||||||||    
T  17288384 gattttaaaaacatttattgaaatgtagggactattattcaaag----tagcgcaaaatgtagggactaataacatatttaacc 17288463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 34129311 - 34129353
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaa 43  Q
    ||||||||||| |||||||||||||||||||||||||||||||    
T  34129311 gattttaaaaatatttaatgaaatgtagggactattcttcaaa 34129353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 51906495 - 51906420
Alignment:
Q  5 ttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 84  Q
    ||||||||||||||||||| ||||||||||||||||||||       ||||||| |||| ||||||||||||||||||||    
T  51906495 ttaaaaacatttaatgaaacgtagggactattcttcaaag----aggcgcaaaatgtaaagactaaaaacatatttaacc 51906420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 1791227 - 1791184
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaag 44  Q
    |||||| |||||||||||||||||||| ||||||||||||||||    
T  1791227 gatttttaaaacatttaatgaaatgtatggactattcttcaaag 1791184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 4 - 85
Target Start/End: Original strand, 1791389 - 1791466
Alignment:
Q  4 tttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacct 85  Q
    |||||||||||||| ||||||||| |||||||| |||||||  ||  |||||||||||| || | |||||||||||||||||    
T  1791389 tttaaaaacatttattgaaatgtaaggactatttttcaaag--tc--acgcaaaacgtaggggccaaaaacatatttaacct 1791466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 30608644 - 30608687
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaag 44  Q
    |||||||||||||||||||||||| ||| |||||||||||||||    
T  30608644 gattttaaaaacatttaatgaaatatagagactattcttcaaag 30608687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 30953012 - 30953051
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttc 40  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  30953012 gattttaaaaacatttaatgaaatgtagggaccattcttc 30953051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 38759783 - 38759740
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaag 44  Q
    |||||||||||||||||||||||||||  |||||||||||||||    
T  38759783 gattttaaaaacatttaatgaaatgtatagactattcttcaaag 38759740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 54143512 - 54143555
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaag 44  Q
    ||||||||||||||||| | ||||||||||||||||||||||||    
T  54143512 gattttaaaaacatttattaaaatgtagggactattcttcaaag 54143555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 30608324 - 30608282
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaa 43  Q
    ||||||||||| || ||||||||||||||||||||||||||||    
T  30608324 gattttaaaaatatataatgaaatgtagggactattcttcaaa 30608282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 34294529 - 34294488
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaa 43  Q
    ||||||||||||||||||||||||||| |||||||||||||||    
T  34294529 gattttaaaaacatttaatgaaatgta-ggactattcttcaaa 34294488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 40841540 - 40841502
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattctt 39  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  40841540 gattttaaaaacatttattgaaatgtagggactattctt 40841502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 40841904 - 40841942
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattctt 39  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  40841904 gattttaaaaacatttattgaaatgtagggactattctt 40841942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 41510147 - 41510068
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 84  Q
    ||||||| ||| ||||||| ||||||||||||||||||||||||    |  ||||||| ||||||| |||||| ||||||||||    
T  41510147 gattttagaaatatttaataaaatgtagggactattcttcaaag----gggcgcaaaatgtaaggattaaaaatatatttaacc 41510068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 55347980 - 55348018
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattctt 39  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  55347980 gattttaaaaacatttattgaaatgtagggactattctt 55348018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 2669085 - 2669048
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattct 38  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  2669085 gattttaaaaacatttattgaaatgtagggactattct 2669048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 2669449 - 2669486
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattct 38  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  2669449 gattttaaaaacatttattgaaatgtagggactattct 2669486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 12108300 - 12108337
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattct 38  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  12108300 gattttaaaaacatttattgaaatgtagggactattct 12108337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 12922720 - 12922683
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattct 38  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  12922720 gattttaaaaacatttattgaaatgtagggactattct 12922683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 25917050 - 25917091
Alignment:
Q  2 attttaaaaacatttaatgaaatgtagggactattcttcaaa 43  Q
    |||||||||||||||||||||||||| ||| |||||||||||    
T  25917050 attttaaaaacatttaatgaaatgtatggattattcttcaaa 25917091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 28957753 - 28957790
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattct 38  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  28957753 gattttaaaaacatttattgaaatgtagggactattct 28957790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 38026118 - 38026155
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattct 38  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  38026118 gattttaaaaacatttattgaaatgtagggactattct 38026155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 43980000 - 43980078
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 84  Q
    ||||||||||||||| | ||||||||||||||||||| |||||  ||||  ||||||| ||| |||| ||||||||||||||||    
T  43980000 gattttaaaaacattcattgaaatgtagggactattc-tcaaa--atcg--cgcaaaatgtagggaccaaaaacatatttaacc 43980078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 54167573 - 54167494
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 84  Q
    ||||||||||||||||| |||||| || ||||||||||| |||  |||  |||||||| ||| ||||| |||||||||||||||    
T  54167573 gattttaaaaacatttattgaaatataaggactattcttgaaa--atc--acgcaaaatgtagggacttaaaacatatttaacc 54167494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 56106472 - 56106516
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaagg 45  Q
    ||||||||||||||||||| |||| |||| |||||||||||||||    
T  56106472 gattttaaaaacatttaataaaatataggaactattcttcaaagg 56106516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 21235472 - 21235507
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactatt 36  Q
    ||||||||||||||||| ||||||||||||||||||    
T  21235472 gattttaaaaacatttattgaaatgtagggactatt 21235507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 26984223 - 26984180
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaag 44  Q
    ||||||||||||||||||| || | |||||||||||||||||||    
T  26984223 gattttaaaaacatttaataaagtctagggactattcttcaaag 26984180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 45
Target Start/End: Complemental strand, 34129072 - 34129029
Alignment:
Q  2 attttaaaaacatttaatgaaatgtagggactattcttcaaagg 45  Q
    ||||||||||| |||||| |||| ||||||||||||||||||||    
T  34129072 attttaaaaacgtttaataaaatatagggactattcttcaaagg 34129029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 48760126 - 48760168
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaa 43  Q
    |||||||||||||||||||||| |||| | |||||||||||||    
T  48760126 gattttaaaaacatttaatgaattgtacgaactattcttcaaa 48760168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 84
Target Start/End: Complemental strand, 1791354 - 1791321
Alignment:
Q  51 acgcaaaacgtaaggactaaaaacatatttaacc 84  Q
    |||||||| |||||||||||||||||||||||||    
T  1791354 acgcaaaatgtaaggactaaaaacatatttaacc 1791321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 5544862 - 5544821
Alignment:
Q  2 attttaaaaacatttaatgaaatgtagggactattcttcaaa 43  Q
    |||||||||| |||||||||||| |||| |||||||||||||    
T  5544862 attttaaaaatatttaatgaaatataggaactattcttcaaa 5544821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 28505287 - 28505250
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattct 38  Q
    ||||||||||||||||| ||||||||| ||||||||||    
T  28505287 gattttaaaaacatttattgaaatgtaaggactattct 28505250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 28957389 - 28957352
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattct 38  Q
    ||||||||||||||||| ||||||||||||| ||||||    
T  28957389 gattttaaaaacatttattgaaatgtagggattattct 28957352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 31227957 - 31227920
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattct 38  Q
    ||||||||||||||||| ||||||||||||| ||||||    
T  31227957 gattttaaaaacatttattgaaatgtagggattattct 31227920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 31228321 - 31228358
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattct 38  Q
    ||||||||||||||||| ||||||||||| ||||||||    
T  31228321 gattttaaaaacatttattgaaatgtaggaactattct 31228358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 55347639 - 55347602
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattct 38  Q
    ||||||||||||||||| | ||||||||||||||||||    
T  55347639 gattttaaaaacatttattaaaatgtagggactattct 55347602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 2 - 84
Target Start/End: Original strand, 1317504 - 1317581
Alignment:
Q  2 attttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 84  Q
    |||||||||||||| | |||||||||||||||||| ||||||  ||||  ||||||| ||| | || ||||||||||||||||    
T  1317504 attttaaaaacattcattgaaatgtagggactatt-ttcaaa--atcg--cgcaaaatgtaggaaccaaaaacatatttaacc 1317581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 3296793 - 3296753
Alignment:
Q  4 tttaaaaacatttaatgaaatgtagggactattcttcaaag 44  Q
    |||||||||||||| | ||||||| ||||||||||||||||    
T  3296793 tttaaaaacatttattaaaatgtaaggactattcttcaaag 3296753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 52 - 84
Target Start/End: Complemental strand, 19310819 - 19310787
Alignment:
Q  52 cgcaaaacgtaaggactaaaaacatatttaacc 84  Q
    ||||||| |||||||||||||||||||||||||    
T  19310819 cgcaaaatgtaaggactaaaaacatatttaacc 19310787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 30048027 - 30048071
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaagg 45  Q
    ||||||||||| ||||||||||||||| | ||| |||||||||||    
T  30048027 gattttaaaaatatttaatgaaatgtaagaactgttcttcaaagg 30048071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 30062368 - 30062412
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaagg 45  Q
    ||||||||||| ||||||||||||||| | ||| |||||||||||    
T  30062368 gattttaaaaatatttaatgaaatgtaagaactgttcttcaaagg 30062412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 35166708 - 35166748
Alignment:
Q  4 tttaaaaacatttaatgaaatgtagggactattcttcaaag 44  Q
    |||||||||||||| | ||||||| ||||||||||||||||    
T  35166708 tttaaaaacatttattaaaatgtaaggactattcttcaaag 35166748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 51; Significance: 4e-20; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 9218524 - 9218603
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 84  Q
    |||||||||||||||||||||||| |||||||||||||||||||    || ||||||| |||| ||||||||||||||||||||    
T  9218524 gattttaaaaacatttaatgaaatatagggactattcttcaaag----gagcgcaaaatgtaatgactaaaaacatatttaacc 9218603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 132070 - 132149
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 84  Q
    ||||||||||||||||||||||||||| ||||||||||||||||    ||  |||||| |||||||||||| ||||||||||||    
T  132070 gattttaaaaacatttaatgaaatgtaaggactattcttcaaag----gagtgcaaaatgtaaggactaaatacatatttaacc 132149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 9217899 - 9217856
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaag 44  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  9217899 gattttaaaaacatttaatgaaatgtagggactattcttcaaag 9217856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 51755925 - 51755968
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaag 44  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  51755925 gattttaaaaacatttaatgaaatgtagggactattcttcaaag 51755968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 13637791 - 13637870
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 84  Q
    ||||||||||| |||||||||||||||| |||||||||||||||    |  ||||||| |||||||||| ||||||||||||||    
T  13637791 gattttaaaaatatttaatgaaatgtagagactattcttcaaag----gggcgcaaaatgtaaggactagaaacatatttaacc 13637870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 22814375 - 22814296
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 84  Q
    ||||||||||||||||||||||||||| ||||||||||||||||    |  ||||||| ||||| | |||||||||||||||||    
T  22814375 gattttaaaaacatttaatgaaatgtatggactattcttcaaag----gggcgcaaaatgtaagaattaaaaacatatttaacc 22814296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 25770400 - 25770321
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 84  Q
    |||| |||||||||||||||||||||||||||||||||||||||    | |  ||||| |||||||||||||||||||| ||||    
T  25770400 gattctaaaaacatttaatgaaatgtagggactattcttcaaag----ggatacaaaatgtaaggactaaaaacatattgaacc 25770321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 43933519 - 43933440
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 84  Q
    ||||||||||| |||||||||||||||||||||||||||||||    ||  | ||||| |||||||||||||| ||||||||||    
T  43933519 gattttaaaaatatttaatgaaatgtagggactattcttcaaa----cgggcacaaaatgtaaggactaaaaatatatttaacc 43933440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 44504397 - 44504476
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 84  Q
    ||||||||||||||||||||||||||| ||||||||||||||||    |   |||||| |||||||||||||||| ||||||||    
T  44504397 gattttaaaaacatttaatgaaatgtaaggactattcttcaaag----gggtgcaaaatgtaaggactaaaaacacatttaacc 44504476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 51471414 - 51471335
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 84  Q
    ||||||||||||||||||||||||||||  |||||||||||||||     |||||||| ||||| ||||| |||||||||||||    
T  51471414 gattttaaaaacatttaatgaaatgtagaaactattcttcaaaggg----acgcaaaatgtaagaactaagaacatatttaacc 51471335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 84
Target Start/End: Original strand, 45728335 - 45728407
Alignment:
Q  8 aaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 84  Q
    |||| ||||||||||||||| ||||||||||||||||    | || ||||| |||||||||||||||||||||||||    
T  45728335 aaaatatttaatgaaatgtatggactattcttcaaag----ggacacaaaatgtaaggactaaaaacatatttaacc 45728407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 25770573 - 25770493
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacct 85  Q
    ||||||||||||||||| |||||||||  ||||||| ||||||  |||  |||||||| ||||||| ||||||||||||||||||    
T  25770573 gattttaaaaacatttattgaaatgtaaagactatttttcaaa--atc--acgcaaaatgtaaggattaaaaacatatttaacct 25770493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 44504171 - 44504129
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaa 43  Q
    ||||||||||| |||||||||||||||||||||||||||||||    
T  44504171 gattttaaaaatatttaatgaaatgtagggactattcttcaaa 44504129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 48868598 - 48868677
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 84  Q
    ||||||||||||||||| |||||||||||||||||| |||||||     | ||||||| ||| ||||||| |||||||||||||    
T  48868598 gattttaaaaacatttattgaaatgtagggactattattcaaag----tagcgcaaaatgtagggactaataacatatttaacc 48868677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 4199897 - 4199975
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 84  Q
    ||||||||||||||||| ||||||||||||||||||| |||||  ||||  ||||||| ||| |||| ||||||||||||||||    
T  4199897 gattttaaaaacatttattgaaatgtagggactattc-tcaaa--atcg--cgcaaaatgtagggaccaaaaacatatttaacc 4199975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 82
Target Start/End: Original strand, 25770728 - 25770804
Alignment:
Q  2 attttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaa 82  Q
    |||||||||||||||||| ||||||||| |||||||||||||     ||  |||||| ||||||| |||||||||||||||    
T  25770728 attttaaaaacatttaataaaatgtaggaactattcttcaaa----tgagtgcaaaatgtaaggattaaaaacatatttaa 25770804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 37172160 - 37172084
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatattta 81  Q
    |||||||||||||||||||||||||||| |||||||||| |||      | ||||||| |||||||||||||| |||||||    
T  37172160 gattttaaaaacatttaatgaaatgtagagactattctttaaa----taagcgcaaaatgtaaggactaaaaaaatattta 37172084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 45539287 - 45539249
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattctt 39  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  45539287 gattttaaaaacatttattgaaatgtagggactattctt 45539249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 45539651 - 45539689
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattctt 39  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  45539651 gattttaaaaacatttattgaaatgtagggactattctt 45539689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 50732304 - 50732229
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatattt 80  Q
    ||||||||||| ||||||||||||||| |||||||| |||||||    || ||||||| |||||||  ||||||||||||    
T  50732304 gattttaaaaatatttaatgaaatgtatggactatttttcaaag----gagcgcaaaatgtaaggataaaaaacatattt 50732229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 50780551 - 50780626
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatattt 80  Q
    ||||||||||| ||||||||||||||| |||||||| |||||||    || ||||||| |||||||  ||||||||||||    
T  50780551 gattttaaaaatatttaatgaaatgtatggactatttttcaaag----gagcgcaaaatgtaaggataaaaaacatattt 50780626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 54588535 - 54588493
Alignment:
Q  2 attttaaaaacatttaatgaaatgtagggactattcttcaaag 44  Q
    |||||||||||||||| ||||||||| ||||||||||||||||    
T  54588535 attttaaaaacatttattgaaatgtatggactattcttcaaag 54588493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 27475468 - 27475390
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 84  Q
    ||||||||||||||| | ||||||||||||||||||| |||||  ||||  ||||||| ||| |||| ||||||||||||||||    
T  27475468 gattttaaaaacattcattgaaatgtagggactattc-tcaaa--atcg--cgcaaaatgtagggaccaaaaacatatttaacc 27475390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 34949834 - 34949756
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 84  Q
    ||||||||||||||| | ||||||||||||||||||| |||||  ||||  ||||||| ||| |||| ||||||||||||||||    
T  34949834 gattttaaaaacattcattgaaatgtagggactattc-tcaaa--atcg--cgcaaaatgtagggaccaaaaacatatttaacc 34949756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 36899332 - 36899295
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattct 38  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  36899332 gattttaaaaacatttattgaaatgtagggactattct 36899295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 36899696 - 36899733
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattct 38  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  36899696 gattttaaaaacatttattgaaatgtagggactattct 36899733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 42606358 - 42606321
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattct 38  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  42606358 gattttaaaaacatttattgaaatgtagggactattct 42606321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 46689760 - 46689723
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattct 38  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  46689760 gattttaaaaacatttattgaaatgtagggactattct 46689723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 83
Target Start/End: Complemental strand, 27013657 - 27013583
Alignment:
Q  5 ttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaac 83  Q
    |||||||||| || | ||||||| |||||||||||||||  |||  |||||||| |||||||| |||||||||||||||    
T  27013657 ttaaaaacatatattaaaatgtaaggactattcttcaaa--atc--acgcaaaatgtaaggaccaaaaacatatttaac 27013583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 38485776 - 38485733
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaag 44  Q
    |||||||||||||| |||| ||||||| ||||||||||||||||    
T  38485776 gattttaaaaacatataataaaatgtatggactattcttcaaag 38485733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 17 - 84
Target Start/End: Original strand, 26741327 - 26741390
Alignment:
Q  17 aatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 84  Q
    |||||||||||  ||||||||||||||||  ||    ||||||||||||||| |||||||||||||||    
T  26741327 aatgaaatgtaaagactattcttcaaaggggcg----caaaacgtaaggacttaaaacatatttaacc 26741390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 34743481 - 34743560
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 84  Q
    |||||| |||||||||||||||||||| |||  ||||||||||||     |||||||  |||||||||| | ||||||||||||    
T  34743481 gatttttaaaacatttaatgaaatgtaaggataattcttcaaaggg----acgcaaagtgtaaggactagatacatatttaacc 34743560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 37172487 - 37172566
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 84  Q
    ||||||||||||||||||| || |||||| | ||||||||||||    | ||| |||||| ||||| |||||| ||||||||||    
T  37172487 gattttaaaaacatttaataaagtgtaggaattattcttcaaag----ggacgtaaaacgcaaggattaaaaatatatttaacc 37172566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 2388710 - 2388673
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattct 38  Q
    ||||||||||||||||| |||||||||| |||||||||    
T  2388710 gattttaaaaacatttattgaaatgtagagactattct 2388673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 2389074 - 2389111
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattct 38  Q
    ||||||||||||||||| | ||||||||||||||||||    
T  2389074 gattttaaaaacatttattaaaatgtagggactattct 2389111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 33225567 - 33225522
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaagga 46  Q
    ||||||||||||||||| | ||||||||||||||||  ||||||||    
T  33225567 gattttaaaaacatttacttaaatgtagggactatttatcaaagga 33225522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 33226933 - 33227011
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaac 83  Q
    ||||||||||||||||| | |||| |||||||||||  ||||||    || ||||||| ||| ||||||| ||||||||||||    
T  33226933 gattttaaaaacatttacttaaatatagggactatttatcaaag----gagcgcaaaatgtagggactaagaacatatttaac 33227011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 42606722 - 42606759
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattct 38  Q
    ||||||||||| ||||| ||||||||||||||||||||    
T  42606722 gattttaaaaatatttattgaaatgtagggactattct 42606759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 46690124 - 46690161
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattct 38  Q
    ||||||||||||||||| ||||||||||||| ||||||    
T  46690124 gattttaaaaacatttattgaaatgtagggattattct 46690161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 27013488 - 27013448
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttca 41  Q
    ||||||||||||||||||| ||||| ||| |||||||||||    
T  27013488 gattttaaaaacatttaataaaatgcaggaactattcttca 27013448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 2e-19; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 32092307 - 32092221
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacctataaaa 91  Q
    ||||||||||||||||||||||||| ||||||||||||||||||       ||||||| ||||||||||||||||||||||||| ||||||    
T  32092307 gattttaaaaacatttaatgaaatgcagggactattcttcaaag----aggcgcaaaatgtaaggactaaaaacatatttaacccataaaa 32092221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 17075628 - 17075707
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 84  Q
    ||||||||||||||||||||||||||||||||||||||||||||       ||||||| |||||||||||||| ||||||||||    
T  17075628 gattttaaaaacatttaatgaaatgtagggactattcttcaaag----aggcgcaaaatgtaaggactaaaaagatatttaacc 17075707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 22948889 - 22948960
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacat 76  Q
    |||||||||||||||||||||||||||| |||||||||||||||| |    ||||||| |||||||||||||||||    
T  22948889 gattttaaaaacatttaatgaaatgtagagactattcttcaaagggt----cgcaaaatgtaaggactaaaaacat 22948960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 17075298 - 17075219
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 84  Q
    |||||||||||| |||||||||||||||||||||||||||||||   ||  |||||||  ||||||||||||||||||||||||    
T  17075298 gattttaaaaacttttaatgaaatgtagggactattcttcaaag---cg-gcgcaaaatataaggactaaaaacatatttaacc 17075219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 2 - 83
Target Start/End: Original strand, 44803644 - 44803721
Alignment:
Q  2 attttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaac 83  Q
    ||||||||||||||||||||||||||| |||||||||| ||||     | ||||||| ||||||||||||||||||||||||    
T  44803644 attttaaaaacatttaatgaaatgtagagactattctttaaag----aagcgcaaaatgtaaggactaaaaacatatttaac 44803721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 18443620 - 18443698
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 84  Q
    ||||||||||||||||| ||||||||||||||||||| |||||  ||||  ||||||| |||||||| ||||||||||||||||    
T  18443620 gattttaaaaacatttattgaaatgtagggactattc-tcaaa--atcg--cgcaaaatgtaaggaccaaaaacatatttaacc 18443698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 11974743 - 11974666
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaa 82  Q
    |||||||||||||||||||||||||||  ||||||| |||||||    || ||||||| ||||||||||||| |||||||||    
T  11974743 gattttaaaaacatttaatgaaatgtacagactatttttcaaag----gagcgcaaaatgtaaggactaaaatcatatttaa 11974666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 20543990 - 20543946
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaagg 45  Q
    ||||||||||| |||||||||||||||||||||||||||||||||    
T  20543990 gattttaaaaaaatttaatgaaatgtagggactattcttcaaagg 20543946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 42750129 - 42750173
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaagg 45  Q
    |||||||||||| ||||||||||||||||||||||||||||||||    
T  42750129 gattttaaaaacgtttaatgaaatgtagggactattcttcaaagg 42750173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 4 - 83
Target Start/End: Original strand, 5029767 - 5029842
Alignment:
Q  4 tttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaac 83  Q
    ||||||||||||||||||||| |||||||||||||||||||      |||||||| |||| ||||||||| |||||||||    
T  5029767 tttaaaaacatttaatgaaatatagggactattcttcaaag----agacgcaaaatgtaacgactaaaaatatatttaac 5029842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 20544321 - 20544363
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaa 43  Q
    ||||||||||||||||||||||||||| |||||||||||||||    
T  20544321 gattttaaaaacatttaatgaaatgtaaggactattcttcaaa 20544363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 27311060 - 27311102
Alignment:
Q  2 attttaaaaacatttaatgaaatgtagggactattcttcaaag 44  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  27311060 attttaaaaacatttaatgaaatgtagggactattctttaaag 27311102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 8 - 45
Target Start/End: Original strand, 6621133 - 6621170
Alignment:
Q  8 aaaacatttaatgaaatgtagggactattcttcaaagg 45  Q
    ||||||||||||||||||||||||||||||||||||||    
T  6621133 aaaacatttaatgaaatgtagggactattcttcaaagg 6621170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 30939575 - 30939654
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 84  Q
    ||||||||||| |||||||||||||||||||||||||||| ||  || |  || |||| ||| |||||||||||||||||||||    
T  30939575 gattttaaaaatatttaatgaaatgtagggactattcttcgaa--atgg--cgtaaaatgtagggactaaaaacatatttaacc 30939654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 27310126 - 27310087
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttc 40  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  27310126 gattttaaaaacatttaatgaaatgtagggaccattcttc 27310087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 28838431 - 28838356
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaac 83  Q
    |||||||||||||||||||||||||| |||||  |||||||||||     || ||||| |||| |||||||||||||||||||    
T  28838431 gattttaaaaacatttaatgaaatgtcgggac--ttcttcaaagg-----acacaaaatgtaaagactaaaaacatatttaac 28838356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 18152835 - 18152756
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 84  Q
    |||||||| |||||||||  ||||||||||||||||||||||||    |  ||||||| ||||| ||| |||||||||||||||    
T  18152835 gattttaagaacatttaacaaaatgtagggactattcttcaaag----gggcgcaaaatgtaagaactgaaaacatatttaacc 18152756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 28852772 - 28852693
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 84  Q
    ||||||||||||||||||||||||||||||| |||| || |||     | || ||||| ||||||| |||||||||||||||||    
T  28852772 gattttaaaaacatttaatgaaatgtagggagtattatttaaa----tggacacaaaatgtaaggattaaaaacatatttaacc 28852693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 1244454 - 1244532
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 84  Q
    ||||||||||||||| | ||||||||||||||||||| |||||  ||||  ||||||| ||| |||| ||||||||||||||||    
T  1244454 gattttaaaaacattcattgaaatgtagggactattc-tcaaa--atcg--cgcaaaatgtagggaccaaaaacatatttaacc 1244532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 10466790 - 10466869
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 84  Q
    ||||||||||||||||||| |||| ||| |||||||||||||   || | |||||||| |||| || |||||||||||||||||    
T  10466790 gattttaaaaacatttaataaaatatagagactattcttcaa---atag-acgcaaaatgtaaagattaaaaacatatttaacc 10466869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 28898107 - 28898029
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 84  Q
    ||||||||||||||| | ||||||||||||||||||| |||||  ||||  ||||||| ||| |||| ||||||||||||||||    
T  28898107 gattttaaaaacattcattgaaatgtagggactattc-tcaaa--atcg--cgcaaaatgtagggaccaaaaacatatttaacc 28898029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 33848309 - 33848346
Alignment:
Q  2 attttaaaaacatttaatgaaatgtagggactattctt 39  Q
    |||||||||||||||| |||||||||||||||||||||    
T  33848309 attttaaaaacatttattgaaatgtagggactattctt 33848346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 41298687 - 41298765
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 84  Q
    ||||||||||||||| | ||||||||||||||||||| |||||  ||||  ||||||| ||| |||| ||||||||||||||||    
T  41298687 gattttaaaaacattcattgaaatgtagggactattc-tcaaa--atcg--cgcaaaatgtagggaccaaaaacatatttaacc 41298765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 18443254 - 18443173
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacctat 87  Q
    ||||||||||||||||| ||||||||| ||||||||| |||||  ||||   |||||| ||| |||| |||||||||||||||||||    
T  18443254 gattttaaaaacatttattgaaatgtaaggactattc-tcaaa--atcg--tgcaaaatgtagggaccaaaaacatatttaacctat 18443173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 84
Target Start/End: Complemental strand, 29784012 - 29783935
Alignment:
Q  2 attttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 84  Q
    |||||||||||||||| |||||| |||||||||||| |||||  ||||  | ||||| ||| |||||||||||||||||||||    
T  29784012 attttaaaaacatttattgaaatatagggactattc-tcaaa--atcg--cacaaaatgtagggactaaaaacatatttaacc 29783935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 16755644 - 16755687
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaag 44  Q
    ||||||||||| |||||||||||| ||| |||||||||||||||    
T  16755644 gattttaaaaatatttaatgaaatatagagactattcttcaaag 16755687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 32092540 - 32092571
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggac 32  Q
    ||||||||||||||||||||||||||||||||    
T  32092540 gattttaaaaacatttaatgaaatgtagggac 32092571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 49053892 - 49053935
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaag 44  Q
    |||||||||||| |||||||||||||||||| |||| |||||||    
T  49053892 gattttaaaaacttttaatgaaatgtagggattatttttcaaag 49053935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 12933072 - 12933151
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 84  Q
    ||||||| ||||||||| | |||| |||||||||||  ||||||||    || ||||| ||| |||||||||||||||||||||    
T  12933072 gattttagaaacatttacttaaatatagggactatttatcaaagga----acacaaaatgtagggactaaaaacatatttaacc 12933151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 28854756 - 28854718
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattctt 39  Q
    ||||||||||||||||||| ||||||||||| |||||||    
T  28854756 gattttaaaaacatttaataaaatgtagggagtattctt 28854718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 22954124 - 22954087
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattct 38  Q
    ||||||||||||||||| | ||||||||||||||||||    
T  22954124 gattttaaaaacatttattaaaatgtagggactattct 22954087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 33847944 - 33847907
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattct 38  Q
    ||||||||||||||||| |||||||||| |||||||||    
T  33847944 gattttaaaaacatttattgaaatgtagagactattct 33847907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 1e-17; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 13315281 - 13315202
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 84  Q
    ||||||||||||||||||||||||||||||||||||||| |||     |  ||||||| |||||||||||||||||||||||||    
T  13315281 gattttaaaaacatttaatgaaatgtagggactattctttaaa----tgggcgcaaaatgtaaggactaaaaacatatttaacc 13315202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 2 - 81
Target Start/End: Original strand, 16662483 - 16662558
Alignment:
Q  2 attttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatattta 81  Q
    |||||||||||||||||||||||||||| |||||||||||||     || ||||||| ||||||||||||||||||||||    
T  16662483 attttaaaaacatttaatgaaatgtaggaactattcttcaaa----agagcgcaaaatgtaaggactaaaaacatattta 16662558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 6297541 - 6297463
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaac 83  Q
    ||||||||||||||||||||||||||||| ||||||||||||||    |  ||||||| |||||||||||| |||||||||||    
T  6297541 gattttaaaaacatttaatgaaatgtaggaactattcttcaaag----gggcgcaaaatgtaaggactaaagacatatttaac 6297463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 6298046 - 6298125
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 84  Q
    ||||||||||||||||||||||||||| |||||||||||||||||   ||| |||||| ||||| |||||||||| ||||||||    
T  6298046 gattttaaaaacatttaatgaaatgtaaggactattcttcaaagg---gaa-gcaaaatgtaagcactaaaaacacatttaacc 6298125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 2 - 84
Target Start/End: Complemental strand, 16662246 - 16662168
Alignment:
Q  2 attttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 84  Q
    |||||||||||||||||||||||||||||||||||||||||||    || ||||||| ||||| ||||||| |||| ||||||    
T  16662246 attttaaaaacatttaatgaaatgtagggactattcttcaaag----gagcgcaaaatgtaagaactaaaatcataattaacc 16662168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 26720400 - 26720323
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaa 82  Q
    ||||||||||| ||||||||||||||||||||||||||||||||    || ||||||| ||| |||||||||| ||||||||    
T  26720400 gattttaaaaatatttaatgaaatgtagggactattcttcaaag----gagcgcaaaatgtagggactaaaaatatatttaa 26720323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 26243406 - 26243482
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatattta 81  Q
    |||||||||||||||||||||||| ||| |||||||||||||||    || |||||||  |||||||||||||||||||||    
T  26243406 gattttaaaaacatttaatgaaatatagagactattcttcaaag----gagcgcaaaatataaggactaaaaacatattta 26243482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 17914276 - 17914197
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 84  Q
    ||||||||||||||||||| ||||||||||||||||||||||||      |||||||| |||| |||| |||||||||||||||    
T  17914276 gattttaaaaacatttaataaaatgtagggactattcttcaaag----agacgcaaaatgtaaagacttaaaacatatttaacc 17914197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 6297873 - 6297916
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaag 44  Q
    ||||||||||||||||||||||||||| ||||||||||||||||    
T  6297873 gattttaaaaacatttaatgaaatgtaaggactattcttcaaag 6297916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 12489307 - 12489265
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaa 43  Q
    ||||||||||| |||||||||||||||||||||||||||||||    
T  12489307 gattttaaaaatatttaatgaaatgtagggactattcttcaaa 12489265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 26997880 - 26997959
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 84  Q
    ||||||||||| | ||||||||||||| |||||||||||||||     | |||||||| ||||| |||||||||||||||||||    
T  26997880 gattttaaaaataattaatgaaatgtatggactattcttcaaa----tggacgcaaaatgtaagaactaaaaacatatttaacc 26997959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 2 - 84
Target Start/End: Complemental strand, 10047556 - 10047479
Alignment:
Q  2 attttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 84  Q
    ||||||||||||||||||||| ||||||||||||||||||||     |  ||||||| ||||||| |||||||||||||||||    
T  10047556 attttaaaaacatttaatgaa-tgtagggactattcttcaaa----agggcgcaaaatgtaaggattaaaaacatatttaacc 10047479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 12489538 - 12489616
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 84  Q
    ||||||||||||||| ||||||||||| ||||||||||||| |    ||| ||||||| |||||||||||||||||||||||||    
T  12489538 gattttaaaaacatt-aatgaaatgtaaggactattcttcataa---cga-cgcaaaatgtaaggactaaaaacatatttaacc 12489616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 29917183 - 29917105
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 84  Q
    ||||||||||||||||| ||||||||||||||||||| |||||  ||||  ||||||||||| |||  ||||||||||||||||    
T  29917183 gattttaaaaacatttattgaaatgtagggactattc-tcaaa--atcg--cgcaaaacgtagggatcaaaaacatatttaacc 29917105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 9800354 - 9800398
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaagg 45  Q
    |||||||||||||||||||||||| || |||||||||||||||||    
T  9800354 gattttaaaaacatttaatgaaatatatggactattcttcaaagg 9800398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 21006133 - 21006177
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaagg 45  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||    
T  21006133 gattttaaaaacatttaataaaatgtagggactatttttcaaagg 21006177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 21005960 - 21006040
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacct 85  Q
    ||||||||||||||||| ||||||||| |||||||| |||||||      |||||||| ||| |||| |||||||||||||||||    
T  21005960 gattttaaaaacatttattgaaatgtaaggactatttttcaaag----ccacgcaaaatgtagggaccaaaaacatatttaacct 21006040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 9800118 - 9800039
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 84  Q
    ||||||||||||||||||| ||||||| ||| ||||||||||||       |||||||  ||||||||||||||||||||||||    
T  9800118 gattttaaaaacatttaataaaatgtaaggattattcttcaaag----aggcgcaaaatctaaggactaaaaacatatttaacc 9800039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 4624612 - 4624533
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 84  Q
    ||||||||||||||||| |||||||||  |||||||||||||||  ||  | ||||||  ||||||| ||||||||||||||||    
T  4624612 gattttaaaaacatttattgaaatgtaaagactattcttcaaag--tc--atgcaaaatataaggaccaaaaacatatttaacc 4624533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 44148656 - 44148578
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaac 83  Q
    |||||||||||| |||| | |||||||||||||||||||||||     || || |||| ||| ||||||||||||||||||||    
T  44148656 gattttaaaaacgtttattaaaatgtagggactattcttcaaa----agagcgtaaaatgtagggactaaaaacatatttaac 44148578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 7344867 - 7344947
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacct 85  Q
    |||||||||||||| |||| ||||||| ||| ||||||||||||    |  | ||||| ||||||||||||||||||| ||||||    
T  7344867 gattttaaaaacatataataaaatgtatggattattcttcaaag----gggcacaaaatgtaaggactaaaaacatatataacct 7344947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 20682787 - 20682744
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaag 44  Q
    ||||||||||||||||| | ||||||| ||||||||||||||||    
T  20682787 gattttaaaaacatttattaaaatgtaaggactattcttcaaag 20682744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 36155350 - 36155307
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaag 44  Q
    ||||||||||||||||| | |||||||||||||||| |||||||    
T  36155350 gattttaaaaacatttattaaaatgtagggactattattcaaag 36155307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 44024304 - 44024262
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaa 43  Q
    ||||||||||||||||  ||||||||| |||||||||||||||    
T  44024304 gattttaaaaacatttggtgaaatgtatggactattcttcaaa 44024262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 29917549 - 29917586
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattct 38  Q
    ||||||||||||||||| ||||||||| ||||||||||    
T  29917549 gattttaaaaacatttattgaaatgtaaggactattct 29917586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 84
Target Start/End: Original strand, 44803575 - 44803653
Alignment:
Q  2 attttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 84  Q
    ||||||||||| |||| | ||||||||||||||||  ||||||    || ||||||| ||| |||||||| ||||||||||||    
T  44803575 attttaaaaacttttacttaaatgtagggactatttatcaaag----gagcgcaaaatgtagggactaaacacatatttaacc 44803653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 2 - 38
Target Start/End: Complemental strand, 22601576 - 22601540
Alignment:
Q  2 attttaaaaacatttaatgaaatgtagggactattct 38  Q
    |||||||||||||||| | ||||||||||||||||||    
T  22601576 attttaaaaacatttatttaaatgtagggactattct 22601540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 2 - 38
Target Start/End: Complemental strand, 24846040 - 24846004
Alignment:
Q  2 attttaaaaacatttaatgaaatgtagggactattct 38  Q
    |||||||||||||||| ||||||||| ||||||||||    
T  24846040 attttaaaaacatttattgaaatgtaaggactattct 24846004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 1e-17; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 211520 - 211441
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 84  Q
    |||||||||| |||||||||||||||| ||||||||||||||||    |  ||||||| |||||||||||||||||||||||||    
T  211520 gattttaaaatcatttaatgaaatgtacggactattcttcaaag----gggcgcaaaatgtaaggactaaaaacatatttaacc 211441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 5974090 - 5974011
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 84  Q
    ||||||||||||||||||||||||||||||||||||||||||||    |   ||||||  ||||||||||||||||||||||||    
T  5974090 gattttaaaaacatttaatgaaatgtagggactattcttcaaag----gggtgcaaaatataaggactaaaaacatatttaacc 5974011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 4510267 - 4510188
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 84  Q
    ||||||||||||||||||||||||||||||||||||||||||   || |  || |||| |||||||||||||||||||||||||    
T  4510267 gattttaaaaacatttaatgaaatgtagggactattcttcaa---atag-gcgtaaaatgtaaggactaaaaacatatttaacc 4510188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 8710351 - 8710430
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 84  Q
    ||||||||||||||||||||||||||| ||||||||||||||||    |   ||||||  ||||||||||||||||||||||||    
T  8710351 gattttaaaaacatttaatgaaatgtaaggactattcttcaaag----gggtgcaaaatataaggactaaaaacatatttaacc 8710430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 17157856 - 17157923
Alignment:
Q  13 atttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 84  Q
    ||||||||||||||||||||||||||||||||  | |  ||||||| |||||||||||||||||||||||||    
T  17157856 atttaatgaaatgtagggactattcttcaaag--tgg--cgcaaaatgtaaggactaaaaacatatttaacc 17157923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 2 - 83
Target Start/End: Original strand, 7645994 - 7646071
Alignment:
Q  2 attttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaac 83  Q
    ||||| |||||||||| ||||||||| ||||||||||||||||    || | ||||| ||||||||||||||||||||||||    
T  7645994 atttttaaaacatttattgaaatgtaaggactattcttcaaag----gagcacaaaatgtaaggactaaaaacatatttaac 7646071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 20522167 - 20522209
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaa 43  Q
    ||||||||||||||||| |||||||||||||||||||||||||    
T  20522167 gattttaaaaacatttattgaaatgtagggactattcttcaaa 20522209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 34984555 - 34984633
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 84  Q
    ||||||||||||||||| ||||||||||||||||||| |||||  ||||  ||||||| ||| |||| ||||||||||||||||    
T  34984555 gattttaaaaacatttattgaaatgtagggactattc-tcaaa--atcg--cgcaaaatgtagggaccaaaaacatatttaacc 34984633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 2 - 42
Target Start/End: Complemental strand, 21113107 - 21113067
Alignment:
Q  2 attttaaaaacatttaatgaaatgtagggactattcttcaa 42  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  21113107 attttaaaaacatttaatgaaatgtagagactattcttcaa 21113067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 7 - 84
Target Start/End: Original strand, 211738 - 211811
Alignment:
Q  7 aaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 84  Q
    ||||| ||||||||||||||||||||||||||||||   || |  ||||||| ||||||| |||||||||||||||||    
T  211738 aaaaatatttaatgaaatgtagggactattcttcaa---atag-gcgcaaaatgtaaggattaaaaacatatttaacc 211811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 14712909 - 14712829
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacct 85  Q
    ||||||||||||||||| ||||||||| |||||||| |||||||      |||||||| ||| |||| |||||||||||||||||    
T  14712909 gattttaaaaacatttattgaaatgtaaggactatttttcaaag----tgacgcaaaatgtagggaccaaaaacatatttaacct 14712829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 14713024 - 14713095
Alignment:
Q  8 aaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaac 83  Q
    |||||||||||||||||||| |||||||||||||||     || ||||||| ||||| | ||||||||||||||||    
T  14713024 aaaacatttaatgaaatgtaaggactattcttcaaa----agagcgcaaaatgtaagaattaaaaacatatttaac 14713095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 14257225 - 14257188
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattct 38  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  14257225 gattttaaaaacatttattgaaatgtagggactattct 14257188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 14257589 - 14257626
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattct 38  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  14257589 gattttaaaaacatttattgaaatgtagggactattct 14257626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 17157625 - 17157584
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaa 42  Q
    ||||||||||| ||||||||||||||| ||||||||||||||    
T  17157625 gattttaaaaatatttaatgaaatgtatggactattcttcaa 17157584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 20824242 - 20824205
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattct 38  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  20824242 gattttaaaaacatttattgaaatgtagggactattct 20824205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 33107372 - 33107450
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 84  Q
    ||||||||||||||| | ||||||||||||||||||| |||||  ||||  ||||||| ||| |||| ||||||||||||||||    
T  33107372 gattttaaaaacattcattgaaatgtagggactattc-tcaaa--atcg--cgcaaaatgtagggaccaaaaacatatttaacc 33107450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 6162699 - 6162776
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaac 83  Q
    ||||||||||||||||| |||||||||| |||||||| |||||  ||||  ||||||| ||| |||| |||||||||||||||    
T  6162699 gattttaaaaacatttattgaaatgtagagactattc-tcaaa--atcg--cgcaaaatgtagggaccaaaaacatatttaac 6162776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 25932147 - 25932083
Alignment:
Q  16 taatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 84  Q
    |||||||||| ||||||||||||||||||    ||| |||||| |||| ||||||||| ||||||||||    
T  25932147 taatgaaatgcagggactattcttcaaag----gaaagcaaaatgtaaagactaaaaatatatttaacc 25932083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 19595660 - 19595698
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattctt 39  Q
    ||||||||||| ||||| |||||||||||||||||||||    
T  19595660 gattttaaaaatatttattgaaatgtagggactattctt 19595698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 15147796 - 15147759
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattct 38  Q
    ||||||||||||||||| ||||||||||||| ||||||    
T  15147796 gattttaaaaacatttattgaaatgtagggattattct 15147759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 20824606 - 20824643
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattct 38  Q
    ||||||||||||||||| ||||||||||||| ||||||    
T  20824606 gattttaaaaacatttattgaaatgtagggattattct 20824643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 1e-17; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 1500992 - 1501071
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 84  Q
    |||||||||||||||||||||||||||||||||||||||||||     || |||||||  || |||||||||||||||||||||    
T  1500992 gattttaaaaacatttaatgaaatgtagggactattcttcaaa----agagcgcaaaatatagggactaaaaacatatttaacc 1501071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 5172824 - 5172745
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 84  Q
    |||||||||||||||||||||||||||| ||||||||||||||     || ||||||| ||||| |||||||||||||||||||    
T  5172824 gattttaaaaacatttaatgaaatgtagagactattcttcaaa----tgagcgcaaaatgtaagaactaaaaacatatttaacc 5172745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 9880563 - 9880484
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 84  Q
    |||||||||||||||||||||||||||| |||| ||||||||||    | | |||||| |||||||||||||||||||||||||    
T  9880563 gattttaaaaacatttaatgaaatgtagagacttttcttcaaag----ggatgcaaaatgtaaggactaaaaacatatttaacc 9880484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 5683240 - 5683160
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacct 85  Q
    ||||||||| |||||||||||||||||||||||||| |||||||      |||||||| ||||||| ||||||||||||||||||    
T  5683240 gattttaaatacatttaatgaaatgtagggactatttttcaaag----agacgcaaaatgtaaggattaaaaacatatttaacct 5683160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 3591348 - 3591427
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 84  Q
    ||||||||||||||||||| ||||||| |||||||||||||||     || ||||||| |||||||||||||| ||||||||||    
T  3591348 gattttaaaaacatttaataaaatgtatggactattcttcaaa----tgagcgcaaaatgtaaggactaaaaatatatttaacc 3591427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 3 - 84
Target Start/End: Complemental strand, 19895477 - 19895400
Alignment:
Q  3 ttttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 84  Q
    ||||||||||||||||| ||||||| |||||||||||||||    ||| |  |||| |||||||||||||||||||||||||    
T  19895477 ttttaaaaacatttaattaaatgtatggactattcttcaaa----cgagcataaaatgtaaggactaaaaacatatttaacc 19895400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 47541597 - 47541553
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaagg 45  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  47541597 gattttaaaaacatttaatgaaatatagggactattcttcaaagg 47541553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 5683572 - 5683614
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaa 43  Q
    ||||||||||| |||||||||||||||||||||||||||||||    
T  5683572 gattttaaaaatatttaatgaaatgtagggactattcttcaaa 5683614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 12869665 - 12869710
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaagga 46  Q
    ||||||||||||||||| ||||||||||||||||||||| ||||||    
T  12869665 gattttaaaaacatttattgaaatgtagggactattctttaaagga 12869710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 36793585 - 36793664
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 84  Q
    ||||||||||||||||| | |||||||| |||||||||||||||  ||  ||||||||  || |||||||||||||||||||||    
T  36793585 gattttaaaaacatttattaaaatgtagagactattcttcaaag--tc--acgcaaaatatagggactaaaaacatatttaacc 36793664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 48155290 - 48155368
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaac 83  Q
    |||||||||||||||||||||||| |||| || |||||||||||    || |||||||  |||||| ||||||||||||||||    
T  48155290 gattttaaaaacatttaatgaaatataggaacaattcttcaaag----gagcgcaaaatataaggattaaaaacatatttaac 48155368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 18180289 - 18180332
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaag 44  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||    
T  18180289 gattttaaaaacatttaataaaatgtatggactattcttcaaag 18180332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 50359204 - 50359165
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttc 40  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  50359204 gatttaaaaaacatttaatgaaatgtagggactattcttc 50359165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 1500138 - 1500100
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattctt 39  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  1500138 gattttaaaaacattcaatgaaatgtagggactattctt 1500100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 3591175 - 3591255
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacct 85  Q
    ||||||||||||||||| ||||||||| |||||||| |||||||  ||  ||||| || ||| |||| |||||||||||||||||    
T  3591175 gattttaaaaacatttattgaaatgtaaggactatttttcaaag--tc--acgcacaatgtagggaccaaaaacatatttaacct 3591255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 45664766 - 45664687
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 84  Q
    ||||||||||||||||| | |||||||| ||||||||||||||     || || |||| ||| |||||||||||||||||||||    
T  45664766 gattttaaaaacatttattaaaatgtagagactattcttcaaa----tgagcgtaaaatgtagggactaaaaacatatttaacc 45664687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 6751364 - 6751444
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 84  Q
    ||||||||||| ||||||||||||||| ||||| ||||| |||||   ||   ||||| |||| ||||||||||||||||||||    
T  6751364 gattttaaaaaaatttaatgaaatgtaaggacttttctttaaagg---gacgccaaaatgtaatgactaaaaacatatttaacc 6751444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 8997419 - 8997382
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattct 38  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  8997419 gattttaaaaacatttattgaaatgtagggactattct 8997382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 17968115 - 17968037
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 84  Q
    ||||||||||||||| | ||||||||||||||||||| |||||  ||||  ||||||| ||| |||| ||||||||||||||||    
T  17968115 gattttaaaaacattcattgaaatgtagggactattc-tcaaa--atcg--cgcaaaatgtagggaccaaaaacatatttaacc 17968037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 19895812 - 19895853
Alignment:
Q  2 attttaaaaacatttaatgaaatgtagggactattcttcaaa 43  Q
    |||||||||||||||||| |||||||| ||||||||||||||    
T  19895812 attttaaaaacatttaataaaatgtagagactattcttcaaa 19895853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 2 - 84
Target Start/End: Original strand, 31436395 - 31436473
Alignment:
Q  2 attttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 84  Q
    |||||||||||||||||| |||| ||| ||||||||||||||     | || ||||| ||||||||||||| |||||||||||    
T  31436395 attttaaaaacatttaataaaatatagtgactattcttcaaa----aggacacaaaatgtaaggactaaaatcatatttaacc 31436473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 32266561 - 32266524
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattct 38  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  32266561 gattttaaaaacatttattgaaatgtagggactattct 32266524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 40124154 - 40124117
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattct 38  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  40124154 gattttaaaaacatttattgaaatgtagggactattct 40124117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 45230572 - 45230650
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 84  Q
    ||||||||||||||| | ||||||||||||||||||| |||||  ||||  ||||||| ||| |||| ||||||||||||||||    
T  45230572 gattttaaaaacattcattgaaatgtagggactattc-tcaaa--atcg--cgcaaaatgtagggaccaaaaacatatttaacc 45230650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 47410501 - 47410464
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattct 38  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  47410501 gattttaaaaacatttattgaaatgtagggactattct 47410464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 47410865 - 47410902
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattct 38  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  47410865 gattttaaaaacatttattgaaatgtagggactattct 47410902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 18179958 - 18179879
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 84  Q
    ||||||||||||| |||||||||| || |||||||| |||||||    |   |||||| ||||||||||||||||| |||||||    
T  18179958 gattttaaaaacaattaatgaaatataaggactatttttcaaag----gggtgcaaaatgtaaggactaaaaacatgtttaacc 18179879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 48155052 - 48155014
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattctt 39  Q
    ||||||||||||||||||| ||||||| |||||||||||    
T  48155052 gattttaaaaacatttaataaaatgtaaggactattctt 48155014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 50359450 - 50359492
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaa 43  Q
    ||||||||||||||||||||||||  | |||||||||||||||    
T  50359450 gattttaaaaacatttaatgaaataaaaggactattcttcaaa 50359492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 9122763 - 9122726
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattct 38  Q
    ||||||||||||||||| ||||||||| ||||||||||    
T  9122763 gattttaaaaacatttattgaaatgtaaggactattct 9122726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 9123127 - 9123164
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattct 38  Q
    ||||||||||||||||| |||||||||| |||||||||    
T  9123127 gattttaaaaacatttattgaaatgtagagactattct 9123164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 84
Target Start/End: Original strand, 9880802 - 9880880
Alignment:
Q  2 attttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 84  Q
    |||||||||||||||||| |||| |||  |||||||||||||     || ||||||| ||||| | |||||||||||||||||    
T  9880802 attttaaaaacatttaataaaatatagaaactattcttcaaa----tgagcgcaaaatgtaagaattaaaaacatatttaacc 9880880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 12868512 - 12868467
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaagga 46  Q
    ||||||||||| ||||| ||||||||||| ||||||||| ||||||    
T  12868512 gattttaaaaatatttattgaaatgtaggaactattctttaaagga 12868467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 32266925 - 32266962
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattct 38  Q
    ||||||||||||||||| ||||||||||||| ||||||    
T  32266925 gattttaaaaacatttattgaaatgtagggattattct 32266962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 40124518 - 40124555
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattct 38  Q
    ||||||||||||||||| ||||||||||||| ||||||    
T  40124518 gattttaaaaacatttattgaaatgtagggattattct 40124555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 46802400 - 46802363
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattct 38  Q
    |||||||||||| |||| ||||||||||||||||||||    
T  46802400 gattttaaaaacttttattgaaatgtagggactattct 46802363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 35203 - 35281
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaac 83  Q
    ||||||||||||||| ||| |||||||| ||||||||||||||||     |||||||| ||||||||||||||||||||||||    
T  35203 gattttaaaaacattcaataaaatgtagagactattcttcaaaggg----acgcaaaatgtaaggactaaaaacatatttaac 35281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 3)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 107801 - 107722
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 84  Q
    ||||||||||| ||||| |||||||||||||||||||||||||||| ||    ||||  |||||| ||||||||||||||||||    
T  107801 gattttaaaaatatttattgaaatgtagggactattcttcaaaggagcg----caaagtgtaaggtctaaaaacatatttaacc 107722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 108133 - 108210
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaa 82  Q
    ||||||||||||||||||||||||||||| |  ||||||||||     |  ||||||| |||||||||||||||||||||||    
T  108133 gattttaaaaacatttaatgaaatgtaggaataattcttcaaa----agggcgcaaaatgtaaggactaaaaacatatttaa 108210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 107974 - 107894
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacct 85  Q
    ||||||||||||||||| ||||||||| |||||||| ||||||  |||  ||| |||| ||| |||| |||||||||||||||||    
T  107974 gattttaaaaacatttattgaaatgtaaggactatttttcaaa--atc--acggaaaatgtagggaccaaaaacatatttaacct 107894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 34; Significance: 0.0000000006; HSPs: 2)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 39863 - 39900
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattct 38  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  39863 gattttaaaaacatttattgaaatgtagggactattct 39900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 39499 - 39462
Alignment:
Q  1 gattttaaaaacatttaatgaaatgtagggactattct 38  Q
    ||||||||||||||||| ||||||||||||| ||||||    
T  39499 gattttaaaaacatttattgaaatgtagggattattct 39462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University