View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20703_high_1 (Length: 359)
Name: NF20703_high_1
Description: NF20703
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20703_high_1 |
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Alignment Details
Target: chr7 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 15 - 254
Target Start/End: Complemental strand, 34051705 - 34051466
Alignment:
| Q |
15 |
aagctttgacagctttattgttcttttgaagtttataaatgcctatatccatagcaatttcatatagacatatggcctaagagactatcaactagcaagc |
114 |
Q |
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| T |
34051705 |
aagctttgatagatttattgttcttttgaagtttataaatgcctatatccatagcaatttcatatagacatatggcctaagagactatcaactagcaagc |
34051606 |
T |
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| Q |
115 |
aactatctacaataggaagtaaatacattaattgggtgaagagctgaatacatattacttaaacgtaagatgcatgaactactttcaaggctattaatat |
214 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34051605 |
aactatctacaataggaagtaaatacattaattgggtgaagagctgaatacatattacttaaacgtaagatgcatgaactactttcaaggctattaatat |
34051506 |
T |
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| Q |
215 |
tggacttgataaacaaattgtttttctatttcttatatcc |
254 |
Q |
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| T |
34051505 |
tggacttgataaacaaattgtttttctatttcttatatcc |
34051466 |
T |
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