View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20705_high_12 (Length: 309)

Name: NF20705_high_12
Description: NF20705
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20705_high_12
NF20705_high_12
[»] chr8 (42 HSPs)
chr8 (205-287)||(4132565-4132647)
chr8 (205-287)||(16446754-16446836)
chr8 (205-284)||(1149511-1149590)
chr8 (205-287)||(9864377-9864459)
chr8 (205-287)||(33906441-33906523)
chr8 (205-287)||(36694845-36694927)
chr8 (205-287)||(466061-466143)
chr8 (205-287)||(1149799-1149881)
chr8 (205-287)||(1205156-1205238)
chr8 (205-287)||(8803696-8803778)
chr8 (205-287)||(12876339-12876421)
chr8 (205-287)||(23854310-23854392)
chr8 (205-287)||(27082717-27082799)
chr8 (205-287)||(35859163-35859245)
chr8 (205-287)||(37970398-37970480)
chr8 (205-286)||(12587812-12587893)
chr8 (205-289)||(1953867-1953951)
chr8 (205-284)||(40862651-40862730)
chr8 (205-287)||(7890836-7890918)
chr8 (205-287)||(10555083-10555165)
chr8 (209-287)||(34895191-34895269)
chr8 (205-287)||(38644207-38644289)
chr8 (205-276)||(5299825-5299896)
chr8 (205-287)||(6098392-6098479)
chr8 (205-268)||(24823273-24823336)
chr8 (205-284)||(43643474-43643553)
chr8 (205-287)||(11727253-11727335)
chr8 (205-287)||(16223092-16223174)
chr8 (209-287)||(30654466-30654544)
chr8 (205-287)||(39098998-39099080)
chr8 (205-287)||(13307852-13307933)
chr8 (217-287)||(34951948-34952018)
chr8 (205-287)||(44869726-44869808)
chr8 (205-274)||(18259321-18259390)
chr8 (209-286)||(34463704-34463778)
chr8 (205-287)||(31933765-31933847)
chr8 (205-287)||(35459590-35459672)
chr8 (232-287)||(41910895-41910949)
chr8 (205-261)||(33198057-33198113)
chr8 (246-287)||(43025931-43025972)
chr8 (239-287)||(7998507-7998555)
chr8 (93-125)||(16446640-16446672)
[»] scaffold0002 (3 HSPs)
scaffold0002 (205-287)||(408302-408384)
scaffold0002 (205-287)||(93973-94055)
scaffold0002 (205-287)||(364-440)
[»] chr7 (47 HSPs)
chr7 (205-287)||(9355700-9355782)
chr7 (205-287)||(32432657-32432739)
chr7 (205-284)||(27283952-27284031)
chr7 (205-287)||(15612633-15612715)
chr7 (205-287)||(18797532-18797614)
chr7 (205-287)||(29173728-29173809)
chr7 (205-287)||(31520615-31520697)
chr7 (205-287)||(32820927-32821009)
chr7 (205-287)||(37110079-37110161)
chr7 (205-287)||(37704387-37704469)
chr7 (205-287)||(44411414-44411496)
chr7 (205-287)||(5657355-5657437)
chr7 (205-287)||(12165948-12166030)
chr7 (205-287)||(17842458-17842540)
chr7 (205-287)||(24211946-24212028)
chr7 (205-287)||(30055732-30055814)
chr7 (205-287)||(37347226-37347308)
chr7 (205-287)||(37703372-37703454)
chr7 (205-287)||(6546724-6546806)
chr7 (205-287)||(12390523-12390605)
chr7 (205-287)||(31578938-31579020)
chr7 (205-287)||(33688136-33688218)
chr7 (205-287)||(35353313-35353395)
chr7 (205-287)||(41764952-41765034)
chr7 (205-287)||(48928171-48928253)
chr7 (209-285)||(10359092-10359168)
chr7 (215-287)||(21991841-21991913)
chr7 (205-287)||(15672633-15672718)
chr7 (205-287)||(8861490-8861572)
chr7 (205-287)||(26980511-26980593)
chr7 (221-287)||(38258750-38258816)
chr7 (205-287)||(44598871-44598953)
chr7 (205-287)||(46481003-46481085)
chr7 (207-287)||(23111397-23111477)
chr7 (212-287)||(38053666-38053741)
chr7 (205-287)||(43925306-43925382)
chr7 (205-287)||(10481810-10481892)
chr7 (205-287)||(43686245-43686327)
chr7 (206-287)||(32593081-32593162)
chr7 (205-287)||(11071411-11071490)
chr7 (205-268)||(22687455-22687518)
chr7 (205-268)||(26587966-26588029)
chr7 (205-275)||(7335010-7335080)
chr7 (205-279)||(34362052-34362126)
chr7 (205-287)||(4583124-4583206)
chr7 (240-287)||(48928473-48928520)
chr7 (205-287)||(25691418-25691500)
[»] chr6 (15 HSPs)
chr6 (205-287)||(3879811-3879893)
chr6 (205-287)||(6091054-6091136)
chr6 (205-287)||(20768312-20768394)
chr6 (208-287)||(5627621-5627700)
chr6 (205-287)||(7234907-7234989)
chr6 (205-287)||(1946064-1946146)
chr6 (209-287)||(6089133-6089211)
chr6 (205-287)||(8513458-8513540)
chr6 (205-287)||(29182394-29182476)
chr6 (209-287)||(33892888-33892966)
chr6 (205-287)||(33619055-33619142)
chr6 (205-287)||(4318694-4318776)
chr6 (205-287)||(21016990-21017066)
chr6 (231-287)||(30353256-30353312)
chr6 (209-264)||(7054649-7054704)
[»] chr5 (54 HSPs)
chr5 (205-287)||(699380-699462)
chr5 (205-287)||(5830122-5830204)
chr5 (205-287)||(31786509-31786591)
chr5 (205-281)||(15992403-15992479)
chr5 (205-287)||(1429025-1429107)
chr5 (205-287)||(13956225-13956307)
chr5 (205-287)||(24886317-24886399)
chr5 (205-287)||(35826349-35826431)
chr5 (210-287)||(23116090-23116167)
chr5 (205-284)||(8437198-8437277)
chr5 (205-287)||(2888308-2888390)
chr5 (205-287)||(9200454-9200536)
chr5 (205-287)||(22255412-22255494)
chr5 (205-287)||(22981023-22981105)
chr5 (205-287)||(25669806-25669888)
chr5 (205-287)||(25889600-25889682)
chr5 (205-287)||(31705475-31705557)
chr5 (209-287)||(35511349-35511427)
chr5 (205-287)||(42342951-42343033)
chr5 (206-283)||(33908467-33908544)
chr5 (205-287)||(5837785-5837867)
chr5 (205-283)||(7208727-7208805)
chr5 (209-287)||(14409208-14409286)
chr5 (205-287)||(19120089-19120171)
chr5 (205-282)||(7693456-7693533)
chr5 (205-282)||(8741748-8741825)
chr5 (206-287)||(32563370-32563451)
chr5 (205-269)||(25500789-25500853)
chr5 (205-284)||(17157894-17157973)
chr5 (205-284)||(22973945-22974024)
chr5 (205-284)||(35504598-35504677)
chr5 (205-287)||(12910585-12910667)
chr5 (205-287)||(22019853-22019935)
chr5 (205-287)||(38528100-38528182)
chr5 (205-287)||(43308523-43308605)
chr5 (208-287)||(35934126-35934205)
chr5 (205-268)||(39573060-39573123)
chr5 (205-287)||(21088629-21088711)
chr5 (205-287)||(27330534-27330616)
chr5 (209-287)||(36860654-36860732)
chr5 (205-287)||(40133615-40133697)
chr5 (205-287)||(36866992-36867074)
chr5 (205-287)||(15724718-15724800)
chr5 (205-287)||(30969187-30969269)
chr5 (205-282)||(6824344-6824420)
chr5 (205-261)||(28416414-28416470)
chr5 (240-287)||(27318385-27318432)
chr5 (227-287)||(23954675-23954734)
chr5 (205-287)||(8466957-8467038)
chr5 (245-287)||(14919431-14919473)
chr5 (91-125)||(25889764-25889798)
chr5 (92-125)||(35511230-35511263)
chr5 (92-124)||(14409089-14409121)
chr5 (89-125)||(23954547-23954583)
[»] chr3 (55 HSPs)
chr3 (205-287)||(11357254-11357336)
chr3 (205-287)||(26941133-26941215)
chr3 (205-287)||(34133156-34133238)
chr3 (205-287)||(2008153-2008235)
chr3 (205-287)||(29099567-29099649)
chr3 (205-287)||(40552132-40552214)
chr3 (205-287)||(46297635-46297717)
chr3 (205-287)||(51212644-51212726)
chr3 (205-287)||(52040795-52040877)
chr3 (205-282)||(33698379-33698456)
chr3 (205-287)||(7327355-7327437)
chr3 (205-287)||(22451189-22451271)
chr3 (205-287)||(22622591-22622673)
chr3 (205-287)||(42505948-42506030)
chr3 (205-287)||(45174727-45174809)
chr3 (205-287)||(53229025-53229107)
chr3 (206-287)||(44186391-44186472)
chr3 (205-276)||(4015691-4015762)
chr3 (205-287)||(21009675-21009757)
chr3 (205-287)||(29164030-29164112)
chr3 (205-287)||(32373691-32373773)
chr3 (205-287)||(48355162-48355244)
chr3 (206-287)||(14586554-14586634)
chr3 (206-287)||(24707989-24708070)
chr3 (205-286)||(33378658-33378739)
chr3 (206-282)||(40936199-40936275)
chr3 (205-276)||(43975765-43975836)
chr3 (205-287)||(24488835-24488917)
chr3 (205-287)||(44891718-44891800)
chr3 (205-287)||(50475032-50475114)
chr3 (206-287)||(54828575-54828656)
chr3 (205-289)||(1089913-1089996)
chr3 (205-289)||(3362474-3362558)
chr3 (205-287)||(25579960-25580042)
chr3 (209-287)||(43348478-43348556)
chr3 (205-287)||(46994534-46994616)
chr3 (205-287)||(47481743-47481825)
chr3 (206-287)||(3655076-3655157)
chr3 (227-287)||(20373139-20373199)
chr3 (212-287)||(11357030-11357105)
chr3 (205-276)||(36012371-36012442)
chr3 (205-276)||(37157940-37158011)
chr3 (205-287)||(22445938-22446020)
chr3 (205-287)||(39282873-39282955)
chr3 (205-287)||(54506028-54506110)
chr3 (228-276)||(27480258-27480306)
chr3 (205-276)||(37203300-37203371)
chr3 (205-287)||(4761521-4761603)
chr3 (209-287)||(21193828-21193906)
chr3 (218-287)||(11467045-11467114)
chr3 (205-274)||(53811607-53811676)
chr3 (212-287)||(38591919-38591994)
chr3 (209-255)||(11835510-11835556)
chr3 (92-125)||(37203453-37203486)
chr3 (93-125)||(37158093-37158125)
[»] chr2 (39 HSPs)
chr2 (205-287)||(7006829-7006911)
chr2 (207-287)||(44913894-44913974)
chr2 (205-287)||(11366272-11366354)
chr2 (205-287)||(41961070-41961152)
chr2 (205-280)||(18494172-18494247)
chr2 (208-287)||(4763861-4763940)
chr2 (205-287)||(2325269-2325351)
chr2 (205-287)||(4263967-4264049)
chr2 (205-287)||(4478595-4478677)
chr2 (205-287)||(33709123-33709205)
chr2 (205-287)||(39167260-39167342)
chr2 (209-287)||(41465731-41465809)
chr2 (205-287)||(43770739-43770821)
chr2 (205-281)||(27349839-27349915)
chr2 (205-276)||(26357818-26357889)
chr2 (212-287)||(45327950-45328025)
chr2 (205-287)||(3177169-3177251)
chr2 (205-287)||(13711689-13711771)
chr2 (205-287)||(19289214-19289296)
chr2 (205-287)||(31570625-31570707)
chr2 (205-287)||(33550878-33550960)
chr2 (205-287)||(33660268-33660350)
chr2 (212-282)||(36642223-36642293)
chr2 (205-276)||(5881770-5881841)
chr2 (205-287)||(4167152-4167234)
chr2 (205-284)||(19500806-19500885)
chr2 (205-287)||(37905940-37906022)
chr2 (205-287)||(43648136-43648218)
chr2 (213-287)||(44286179-44286253)
chr2 (205-287)||(35959126-35959204)
chr2 (227-287)||(17071650-17071710)
chr2 (227-287)||(29242051-29242111)
chr2 (205-287)||(19314074-19314159)
chr2 (205-275)||(41051191-41051260)
chr2 (227-287)||(17054009-17054069)
chr2 (205-287)||(31862082-31862164)
chr2 (231-287)||(18258204-18258260)
chr2 (243-287)||(41463779-41463823)
chr2 (205-246)||(19424533-19424574)
[»] chr1 (54 HSPs)
chr1 (205-287)||(3535149-3535231)
chr1 (205-287)||(8222354-8222436)
chr1 (205-287)||(14758258-14758340)
chr1 (205-287)||(16415872-16415954)
chr1 (205-287)||(2959974-2960056)
chr1 (205-287)||(23999573-23999655)
chr1 (205-287)||(27227353-27227435)
chr1 (205-287)||(27267068-27267150)
chr1 (205-287)||(37451511-37451593)
chr1 (205-287)||(37618769-37618851)
chr1 (205-287)||(46931635-46931717)
chr1 (205-287)||(51129085-51129167)
chr1 (205-285)||(30254651-30254731)
chr1 (205-287)||(238381-238463)
chr1 (205-287)||(3309379-3309461)
chr1 (205-287)||(15383159-15383241)
chr1 (205-287)||(19899637-19899719)
chr1 (209-287)||(25160858-25160936)
chr1 (205-287)||(27532849-27532931)
chr1 (209-287)||(47682366-47682444)
chr1 (205-287)||(48353768-48353850)
chr1 (205-286)||(27563773-27563854)
chr1 (205-287)||(1359803-1359885)
chr1 (205-287)||(4330507-4330589)
chr1 (205-287)||(11742236-11742318)
chr1 (205-287)||(15168322-15168404)
chr1 (206-284)||(27763180-27763258)
chr1 (205-287)||(28564651-28564733)
chr1 (205-287)||(28769879-28769961)
chr1 (205-287)||(30326820-30326902)
chr1 (205-287)||(32267260-32267342)
chr1 (209-287)||(34012254-34012332)
chr1 (205-287)||(38823440-38823522)
chr1 (205-287)||(40885039-40885121)
chr1 (205-287)||(41926383-41926464)
chr1 (205-287)||(7078931-7079013)
chr1 (205-287)||(9902922-9903004)
chr1 (205-287)||(10922953-10923035)
chr1 (205-287)||(32216281-32216363)
chr1 (205-287)||(47279415-47279497)
chr1 (205-282)||(39393615-39393692)
chr1 (205-268)||(1547516-1547579)
chr1 (205-284)||(21289829-21289908)
chr1 (205-287)||(18422877-18422959)
chr1 (209-287)||(33725472-33725550)
chr1 (205-287)||(10181875-10181958)
chr1 (206-287)||(22170937-22171018)
chr1 (206-287)||(42721265-42721343)
chr1 (205-267)||(31621417-31621479)
chr1 (206-287)||(38759759-38759840)
chr1 (235-287)||(48620854-48620906)
chr1 (205-287)||(15752255-15752337)
chr1 (205-276)||(31962853-31962924)
chr1 (88-124)||(33725360-33725396)
[»] chr4 (53 HSPs)
chr4 (205-285)||(4205216-4205296)
chr4 (205-287)||(7703739-7703821)
chr4 (205-287)||(17173520-17173602)
chr4 (205-287)||(19440547-19440629)
chr4 (205-287)||(34361391-34361473)
chr4 (205-287)||(34947994-34948076)
chr4 (205-287)||(55477790-55477872)
chr4 (205-289)||(7152103-7152187)
chr4 (206-282)||(55241005-55241081)
chr4 (205-287)||(1815531-1815613)
chr4 (205-287)||(17167943-17168025)
chr4 (205-287)||(32912479-32912561)
chr4 (205-287)||(33341628-33341710)
chr4 (205-287)||(35020934-35021016)
chr4 (205-287)||(36493588-36493670)
chr4 (205-287)||(37663640-37663722)
chr4 (205-287)||(39400238-39400320)
chr4 (205-287)||(46888057-46888139)
chr4 (205-287)||(50697471-50697554)
chr4 (205-287)||(879447-879529)
chr4 (207-281)||(9139465-9139539)
chr4 (205-287)||(19089352-19089434)
chr4 (205-287)||(23761301-23761383)
chr4 (205-287)||(28002885-28002967)
chr4 (205-287)||(30002540-30002622)
chr4 (205-287)||(32579676-32579758)
chr4 (205-287)||(33816415-33816497)
chr4 (205-287)||(37287958-37288040)
chr4 (205-287)||(37775888-37775970)
chr4 (205-287)||(47253970-47254052)
chr4 (205-284)||(25184346-25184425)
chr4 (205-287)||(42199959-42200042)
chr4 (205-287)||(3042849-3042931)
chr4 (205-287)||(50764950-50765032)
chr4 (206-287)||(5047866-5047947)
chr4 (205-287)||(6864265-6864347)
chr4 (205-287)||(17272194-17272276)
chr4 (205-287)||(27396846-27396928)
chr4 (205-287)||(29584099-29584181)
chr4 (205-287)||(38012084-38012166)
chr4 (209-287)||(49376197-49376275)
chr4 (206-287)||(4598212-4598293)
chr4 (209-282)||(32592319-32592392)
chr4 (213-276)||(56050171-56050234)
chr4 (240-287)||(35025530-35025577)
chr4 (205-255)||(35025465-35025515)
chr4 (238-287)||(4934134-4934183)
chr4 (213-289)||(25700963-25701039)
chr4 (205-246)||(23431826-23431867)
chr4 (205-276)||(46884013-46884080)
chr4 (205-284)||(26896320-26896399)
chr4 (90-125)||(34361273-34361308)
chr4 (92-125)||(33816300-33816333)
[»] scaffold0318 (1 HSPs)
scaffold0318 (205-287)||(12139-12221)
[»] scaffold0291 (1 HSPs)
scaffold0291 (205-287)||(8117-8199)
[»] scaffold0022 (1 HSPs)
scaffold0022 (209-287)||(145893-145971)
[»] scaffold0008 (1 HSPs)
scaffold0008 (205-287)||(267515-267597)
[»] scaffold0061 (1 HSPs)
scaffold0061 (210-287)||(44186-44263)
[»] scaffold0017 (1 HSPs)
scaffold0017 (210-287)||(154524-154601)
[»] scaffold0009 (1 HSPs)
scaffold0009 (250-287)||(100957-100994)


Alignment Details
Target: chr8 (Bit Score: 75; Significance: 1e-34; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 4132565 - 4132647
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  4132565 catctagtaatgcttgcaacatcttggacttacaggtactattttatcgttggcatctttaacatgcaaacatagttgatgat 4132647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 16446754 - 16446836
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  16446754 catctagtaatgcttgcaacatcttggacttacaggtactattttatcattggcatctttaacatgcaaacagatttgatgat 16446836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 205 - 284
Target Start/End: Original strand, 1149511 - 1149590
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgat 284  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||    
T  1149511 catctagtaatgcttgcaacatcttggacttacaggtactattttatcgttggaatctttaacatgcaaacaaagttgat 1149590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 9864459 - 9864377
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  9864459 catctagtaatgcttgcaacatcttgaacttacaggtactattttatcgttggcatctttaacatgcaaacaaaattgatgat 9864377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 33906523 - 33906441
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  33906523 catctagtaatgcttgcaacatcttggacttacatgtactattttatcgttgacatctttaacatgcaaacatagttgatgat 33906441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 36694845 - 36694927
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    |||||||| |||||||||||| |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  36694845 catctagtgatgcttgcaacatcttggatttacatgtactattttatcgttggcatctttaacatgcaaacagagttgatgat 36694927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 466143 - 466061
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| ||| |||||||||||| ||||||||| ||||||||||||||||||||||||||||| ||||    
T  466143 catctagtaatgcttgcaacatcttagacttacaggtattattttatcattggcatctttaacatgcaaacagagttgctgat 466061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 1149799 - 1149881
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| ||| |||||||| |||||||||||||||||| |||||||||||||||||| ||||||||||    
T  1149799 catctagtaatgcttgcaacatcttagacttacaagtactattttatcgttggaatctttaacatgcaaacaaagttgatgat 1149881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 1205238 - 1205156
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||| ||||||||| |||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||    
T  1205238 catctagtaatacttgcaacatcttggacttacaggtactattttatcgttaaaatctttaacatgcaaacagagttgatgat 1205156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 8803696 - 8803778
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||| ||||||||||||||| |||||||||||| |||||||||||||||||| |||||||||||||||| ||||||||||||    
T  8803696 catctggtaatgcttgcaacatcttggacttacatgtactattttatcgttggaatctttaacatgcaaatagagttgatgat 8803778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 12876421 - 12876339
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||| || |||| |||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  12876421 catctagtaatgcctgtaacatcttggacttacatgtactattttatcgttgacatctttaacatgcaaacagagttgatgat 12876339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 23854310 - 23854392
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| || || ||||||||||||||| |||||||||||||    
T  23854310 catctagtaatgcttgcaacatcttggacttacaggtactattttattgtcggaatctttaacatgcaagcagagttgatgat 23854392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 27082717 - 27082799
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||||||||| ||||||||||||||||||| |||| |||||    
T  27082717 catctagtaatgcttgcaacatcttggacttacatgtactattttatcgttgacatctttaacatgcaaacatagtttatgat 27082799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 35859245 - 35859163
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| || | ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  35859245 catctagtaatgcttgcaacatctcgaacttacaagtactattttatcgttggcatctttaacatgcaaacagatttgatgat 35859163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 37970398 - 37970480
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| ||  | |||||||||||||||||||||||||||||    
T  37970398 catctagtaatgcttgcaacatcttggacttacaggtactattttattgtaaggatctttaacatgcaaacagagttgatgat 37970480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 205 - 286
Target Start/End: Complemental strand, 12587893 - 12587812
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatga 286  Q
    ||||||||||||||||||| | ||| |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  12587893 catctagtaatgcttgcaaaatctttgacttacaggtactattttatcgttgacatctttaacatgcaaatagagttgatga 12587812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 205 - 289
Target Start/End: Original strand, 1953867 - 1953951
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgatgt 289  Q
    |||||| |||||||||||| | |||||| ||||||||||||||||||||||| || |||||||||||||||||||||||||||||    
T  1953867 catctaataatgcttgcaaaatcttggatttacaggtactattttatcgttgacaactttaacatgcaaacagagttgatgatgt 1953951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 205 - 284
Target Start/End: Complemental strand, 40862730 - 40862651
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgat 284  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||||||| |||||| |||||||    
T  40862730 catctagtaatgcttgcaacatcttggacttacatgtactattttatcgttgacatctttaacatacaaacatagttgat 40862651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 7890836 - 7890918
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    |||||||||||||||||||||  || |||||||| |||||||||||||||||| ||||||||||||||| |||||||||||||    
T  7890836 catctagtaatgcttgcaacattttagacttacatgtactattttatcgttggaatctttaacatgcaaccagagttgatgat 7890918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 10555083 - 10555165
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||| || || |||||||||||||||||| ||||||||||    
T  10555083 catctagtaatgcttgcaatatcttggacttacaggtactattttattgtcggaatctttaacatgcaaacaaagttgatgat 10555165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 209 - 287
Target Start/End: Complemental strand, 34895269 - 34895191
Alignment:
Q  209 tagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||| |||| ||||||| |||||||||| |||||||||||||||||||||||||||| ||||||||    
T  34895269 tagtaatgcttgcaacatcttgaacttacatgtactattttttcgttggcatctttaacatgcaaacagatttgatgat 34895191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 38644289 - 38644207
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||||| ||| |||||||||| |||||||||||||| ||||    
T  38644289 catctagtaatgcttgcaacatcttggacttacatgtactattttatcattgacatctttaacttgcaaacagagttgctgat 38644207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 205 - 276
Target Start/End: Original strand, 5299825 - 5299896
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaaca 276  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||||||||  ||||||||||||||||||    
T  5299825 catctagtaatgcttgcaacatcttggacttacatgtactattttatcgttgttatctttaacatgcaaaca 5299896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 6098392 - 6098479
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttat-----cgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| |||||||||||| |||||||| |||     ||||||||||||||||||||||||||||||||||||    
T  6098392 catctagtaatgcttgcaacatcttggacttacaagtactattgtattgtatcgttggcatctttaacatgcaaacagagttgatgat 6098479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 205 - 268
Target Start/End: Original strand, 24823273 - 24823336
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaaca 268  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  24823273 catctagtaatgcttgcaacatcttggacttacatgtactattttatcgttggcatctttaaca 24823336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 205 - 284
Target Start/End: Original strand, 43643474 - 43643553
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgat 284  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||| || || || |||||||||||||||||||||||    
T  43643474 catctagtaatgcttgcaacatcttggacttacatgtactattttattgtcggaatttttaacatgcaaacagagttgat 43643553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 11727335 - 11727253
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| ||| ||||||||  ||||||||||||||||||||||||||||| |||||| ||||| ||||    
T  11727335 catctagtaatgcttgcaacatcttagacttacatatactattttatcgttggcatctttaacattcaaacaaagttgttgat 11727253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 16223174 - 16223092
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| ||| |||||||| ||||||||||||| |||| |||||||| ||||||||| ||||||||||    
T  16223174 catctagtaatgcttgcaacatcttagacttacatgtactattttatcattggaatctttaaaatgcaaacaaagttgatgat 16223092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 209 - 287
Target Start/End: Original strand, 30654466 - 30654544
Alignment:
Q  209 tagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||  || ||||||||||||| |||||| |||||    
T  30654466 tagtaatgcttgcaacatcttggacttacaggtactattttatcgttgaaatttttaacatgcaaatagagtttatgat 30654544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 39098998 - 39099080
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    |||||||||||||||||||||  |||||||||||  |||||||||||||||| ||| ||||||||||||||||||||| ||||    
T  39098998 catctagtaatgcttgcaacattttggacttacatatactattttatcgttgacatatttaacatgcaaacagagttgctgat 39099080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 13307933 - 13307852
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||| ||||||||||||||| |||| |||||| |||||||||||||||||| ||| ||||||||||||||||||||| ||||    
T  13307933 catcttgtaatgcttgcaacatcttgaacttacgggtactattttatcgttgacat-tttaacatgcaaacagagttgttgat 13307852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 217 - 287
Target Start/End: Original strand, 34951948 - 34952018
Alignment:
Q  217 cttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||| ||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  34951948 cttgcaacatcttagacttacatgtactattttatcgttgacatctttaacatgcaaacagagttgctgat 34952018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 44869808 - 44869726
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||| | ||||||||||  |||||||||||||||||| ||||||||||||| ||||| ||||| ||||    
T  44869808 catctagtaatgcttgcaatatcttggacttatcggtactattttatcgttgacatctttaacatggaaacaaagttgctgat 44869726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 205 - 274
Target Start/End: Complemental strand, 18259390 - 18259321
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaa 274  Q
    ||||||||||||||||||||| ||| |||||||| ||||||||||||||||| ||| |||||||||||||    
T  18259390 catctagtaatgcttgcaacatcttagacttacatgtactattttatcgttgacatttttaacatgcaaa 18259321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 209 - 286
Target Start/End: Complemental strand, 34463778 - 34463704
Alignment:
Q  209 tagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatga 286  Q
    |||||||||||||||||   |||||||| ||||| ||||||||||||| ||||||||||||||||||| |||||||||    
T  34463778 tagtaatgcttgcaaca---tggacttataggtattattttatcgttgacatctttaacatgcaaacaaagttgatga 34463704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 31933765 - 31933847
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||  ||||| | ||| |||||||| |||||||||||| ||||| ||| |||||||||||||||| ||||||||    
T  31933765 catctagtaatgtctgcaatatcttagacttacaagtactattttattgttggaatccttaacatgcaaacagacttgatgat 31933847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 35459590 - 35459672
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    |||||||||||| ||||||||  |||||||||||| ||||||||||| || |  ||||||||||| |||||||| ||||||||    
T  35459590 catctagtaatgtttgcaacattttggacttacagatactattttattgtcgaaatctttaacatacaaacagaattgatgat 35459672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 232 - 287
Target Start/End: Original strand, 41910895 - 41910949
Alignment:
Q  232 acttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||||||||| ||||    
T  41910895 acttacaggtaatattttatcgttg-catctttaacatgcaaacagagttggtgat 41910949  T

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Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 205 - 261
Target Start/End: Complemental strand, 33198113 - 33198057
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatc 261  Q
    |||||||| ||||||||||||  || |||||||| ||||||||||||||||||||||    
T  33198113 catctagtgatgcttgcaacattttagacttacatgtactattttatcgttggcatc 33198057  T

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Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 246 - 287
Target Start/End: Complemental strand, 43025972 - 43025931
Alignment:
Q  246 ttttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||| |||||||||||||||| |||||||||||||    
T  43025972 ttttatcgttgacatctttaacatgcaatcagagttgatgat 43025931  T

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Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 287
Target Start/End: Complemental strand, 7998555 - 7998507
Alignment:
Q  239 ggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    |||||||||||||||||||||||||||| ||  ||||||||||| ||||    
T  7998555 ggtactattttatcgttggcatctttaatatagaaacagagttgttgat 7998507  T

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Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 125
Target Start/End: Original strand, 16446640 - 16446672
Alignment:
Q  93 agggagcttctacgctgcagtcaggaaactgac 125  Q
    |||||||||||||| ||||||||||||||||||    
T  16446640 agggagcttctacggtgcagtcaggaaactgac 16446672  T

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Target: scaffold0002 (Bit Score: 71; Significance: 4e-32; HSPs: 3)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 408302 - 408384
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||    
T  408302 catctagtaatgcttgcaacatcttggacttacatgtactattttatcgttggaatctttaacatgcaaacagagttgatgat 408384  T

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Target: scaffold0002; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 93973 - 94055
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||||||||| ||||||||||||||||||| | ||||||||    
T  93973 catctagtaatgcttgcaacatcttggacttacaagtactattttatcgttgacatctttaacatgcaaacaaatttgatgat 94055  T

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Target: scaffold0002; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 440 - 364
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| |||||||      ||||||||||||||||||||||||||||||||||||||||||||||||    
T  440 catctagtaatgcttgcaacatcttggac------gtactattttatcgttggcatctttaacatgcaaacagagttgatgat 364  T

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Target: chr7 (Bit Score: 71; Significance: 4e-32; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 9355700 - 9355782
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||    
T  9355700 catctagtaatgcttgcaacatcttggacttacaagtactattttatcgttggcatctttaacatgcaaacatagttgatgat 9355782  T

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Target: chr7; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 32432739 - 32432657
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| |||||||||    
T  32432739 catctagtaatgcttgcaacaccttggacttacatgtactattttatcgttggcatctttaatatgcaaacagtgttgatgat 32432657  T

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Target: chr7; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 205 - 284
Target Start/End: Complemental strand, 27284031 - 27283952
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgat 284  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||    
T  27284031 catctagtaatgcttgcaacatcttggacttacaggtactattttatcgttggaatctttaacatgcaaacatagttgat 27283952  T

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Target: chr7; HSP #4
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 15612633 - 15612715
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  15612633 catctagtaatgcttgcaacatcttagacttacaggtactattttatcattggcatctttaacatgcaaacagagttgctgat 15612715  T

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Target: chr7; HSP #5
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 18797614 - 18797532
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| || || |||||||||||||||||||||||||||||    
T  18797614 catctagtaatgcttgcaacatcttggacttacaggtactattttattgtcggaatctttaacatgcaaacagagttgatgat 18797532  T

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Target: chr7; HSP #6
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 29173809 - 29173728
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||    
T  29173809 catctagtaatgcttgcaacatcttggacttacagatactattttatcgttggcat-tttaacatgcaaacagagttgatgat 29173728  T

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Target: chr7; HSP #7
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 31520615 - 31520697
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    |||| |||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||    
T  31520615 catcgagtaatgcttgcaacatcttggacttacagatactattttatcgttggcatctttaacatgcaaatagagttgatgat 31520697  T

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Target: chr7; HSP #8
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 32820927 - 32821009
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| ||| |||||||| |||||||||||||||||| |||||||||||||||||||||||||||||    
T  32820927 catctagtaatgcttgcaacatcttagacttacatgtactattttatcgttggaatctttaacatgcaaacagagttgatgat 32821009  T

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Target: chr7; HSP #9
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 37110161 - 37110079
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||||||||  |||||||||||||||||||||||||||||    
T  37110161 catctagtaatgcttgcaacatcttggacttacatgtactattttatcgttgaaatctttaacatgcaaacagagttgatgat 37110079  T

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Target: chr7; HSP #10
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 37704469 - 37704387
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||| ||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||    
T  37704469 catctggtaatgcttgcaacatcttggacttacagatactattttatcgttggcatctttaacatgcaaatagagttgatgat 37704387  T

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Target: chr7; HSP #11
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 44411414 - 44411496
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| ||||||||||||| || ||||||||||||||||||||||||||||||||| ||||||||||    
T  44411414 catctagtaatgcttgcaacatcttggacttacagataatattttatcgttggcatctttaacatgcaaacaaagttgatgat 44411496  T

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Target: chr7; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 5657355 - 5657437
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  5657355 catctagtaatgcttgcaacatcttagacttacatgtactattttatcgttggcatctttaacatgcaaacatagttgctgat 5657437  T

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Target: chr7; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 12166030 - 12165948
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| ||| ||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||||    
T  12166030 catctagtaatgcttgcaacatcttagacttacagatactattttatcgttgtcatctttaacatgcaaacagagttgctgat 12165948  T

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Target: chr7; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 17842458 - 17842540
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    |||||| |||||||||||||| |||||||||||| |||||||||||||||||  |||||||||||||||||||||||||||||    
T  17842458 catctaataatgcttgcaacatcttggacttacatgtactattttatcgttgaaatctttaacatgcaaacagagttgatgat 17842540  T

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Target: chr7; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 24212028 - 24211946
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| |||||||||| |||||||||||||||||||| |||||||||||||||| | ||||||||||    
T  24212028 catctagtaatgcttgcaacatcttggacttataggtactattttatcgttggaatctttaacatgcaaataaagttgatgat 24211946  T

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Target: chr7; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 30055814 - 30055732
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||| ||||  |||||||||    
T  30055814 catctagtaatgcttgcaacatcttggacttacaggtactattttatcgttggaatctttaacatgcgaacaacgttgatgat 30055732  T

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Target: chr7; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 37347308 - 37347226
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    |||| |||||||||||||| | ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||    
T  37347308 catcgagtaatgcttgcaatatcttggacttacagatactattttatcattggcatctttaacatgcaaacagagttgatgat 37347226  T

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Target: chr7; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 37703372 - 37703454
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    |||||||||||| |||||||| ||||||||||||| |||||||||||||||| ||||||||||||||||||| ||||||||||    
T  37703372 catctagtaatgtttgcaacatcttggacttacagatactattttatcgttgacatctttaacatgcaaacatagttgatgat 37703454  T

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Target: chr7; HSP #19
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 6546806 - 6546724
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    |||||||||||||||||  || ||| ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||    
T  6546806 catctagtaatgcttgcctcatcttagacttacaggtactattttatcgttggcatctttaacatacaaacagagttgctgat 6546724  T

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Target: chr7; HSP #20
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 12390523 - 12390605
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    |||||||||||| |||||||| |||||||||||| ||||||||||||| |||||||||||||||||||| | |||||||||||    
T  12390523 catctagtaatggttgcaacatcttggacttacatgtactattttatcattggcatctttaacatgcaagctgagttgatgat 12390605  T

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Target: chr7; HSP #21
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 31578938 - 31579020
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| |||||||||||| ||| |||||||||||||| |||||||||||||||| | ||||||||||    
T  31578938 catctagtaatgcttgcaacatcttggacttacatgtattattttatcgttggaatctttaacatgcaaataaagttgatgat 31579020  T

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Target: chr7; HSP #22
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 33688136 - 33688218
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||||| ||| |||||||||| |||||||||||||| ||||    
T  33688136 catctagtaatgcttgcaacatcttggacttacatgtactattttatcattgacatctttaacttgcaaacagagttgctgat 33688218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 35353395 - 35353313
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| |||||||||| | ||||||||||||||||| ||||||||||||||||| | ||||||||||    
T  35353395 catctagtaatgcttgcaacatcttggacttaaatgtactattttatcgttgacatctttaacatgcaaatatagttgatgat 35353313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 41764952 - 41765034
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    |||| |||||||||||||| | |||||||||||| ||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  41764952 catccagtaatgcttgcaaaatcttggacttacatgtactatttcatcgttggcatctttaacatgcaaacatagttgatgat 41765034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 48928171 - 48928253
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    |||||||||||| |||||||| |||||||||||| ||||||||| ||||||||||| ||||||||||||||| ||||||||||    
T  48928171 catctagtaatgtttgcaacatcttggacttacatgtactatttcatcgttggcatttttaacatgcaaacatagttgatgat 48928253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 209 - 285
Target Start/End: Original strand, 10359092 - 10359168
Alignment:
Q  209 tagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatg 285  Q
    ||||||||||||||| | |||||||||||| |||||| |||||||||| ||||||||||||||||||||||||||||    
T  10359092 tagtaatgcttgcaaaatcttggacttacaagtactaatttatcgttgacatctttaacatgcaaacagagttgatg 10359168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 215 - 287
Target Start/End: Complemental strand, 21991913 - 21991841
Alignment:
Q  215 tgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| ||||    
T  21991913 tgcttgcaacatcttggacttacaggtactattttatcgttgacatctttaacatgcaaacaaagttgctgat 21991841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 15672633 - 15672718
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactatt---ttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    |||||||||||||||||||||  ||||||||||||||||||||   |||||||||||||||||||||| |||| ||||||||||||    
T  15672633 catctagtaatgcttgcaacattttggacttacaggtactattattttatcgttggcatctttaacattcaaatagagttgatgat 15672718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 8861572 - 8861490
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||| ||||||| ||| |||||||| |||||||||||||||||| |||||||||||||||| ||||||| ||||    
T  8861572 catctagtaatgcatgcaacatcttagacttacatgtactattttatcgttggtatctttaacatgcaaagagagttgctgat 8861490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 26980593 - 26980511
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||| ||||||||| ||| ||||||||| |||||||||||||||| ||||||||||||||||| ||||||| ||||    
T  26980593 catctagtaatacttgcaacatcttagacttacagatactattttatcgttgacatctttaacatgcaaatagagttgctgat 26980511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 221 - 287
Target Start/End: Complemental strand, 38258816 - 38258750
Alignment:
Q  221 caacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||    
T  38258816 caacatcttggacttacaggtactattttatcgttggaatctttaacatgcaaacaaagttgatgat 38258750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 44598953 - 44598871
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    |||||||||||||||| |||| ||| |||||||| ||| ||||||||||||| ||||||||||||||||||||||||| ||||    
T  44598953 catctagtaatgcttgtaacatcttagacttacatgtattattttatcgttgtcatctttaacatgcaaacagagttgttgat 44598871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 46481003 - 46481085
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    |||||||||||| |||||||| ||| |||||||| ||||||||||||||||| ||||||||||||||||||| |||| |||||    
T  46481003 catctagtaatgtttgcaacatcttagacttacatgtactattttatcgttgacatctttaacatgcaaacaaagttaatgat 46481085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 207 - 287
Target Start/End: Complemental strand, 23111477 - 23111397
Alignment:
Q  207 tctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||| ||||| ||| || ||||| |||||||||||||||||  |||||||||||||||||||||||||||||    
T  23111477 tctagtaatgctttcaacatctttgatttacatgtactattttatcgttgttatctttaacatgcaaacagagttgatgat 23111397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 212 - 287
Target Start/End: Complemental strand, 38053741 - 38053666
Alignment:
Q  212 taatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||| |||||||| ||||||||||||||||||||||||| ||||| ||||||||||| |||| ||||||||||||    
T  38053741 taatgtttgcaacatcttggacttacaggtactattttattgttggaatctttaacatccaaatagagttgatgat 38053666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 43925382 - 43925306
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| |||||||      ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  43925382 catctagtaatgcttgcaacatcttggac------gtattattttatcgttggcatctttaacatgcaaacagagttgatgat 43925306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 10481892 - 10481810
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||| ||||||||| ||||||||||| | ||||||||||| ||||| |||||| ||||||||| ||||||||||||    
T  10481892 catctagtaatacttgcaacatcttggacttacggatactattttattgttggaatctttgacatgcaaagagagttgatgat 10481810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 43686327 - 43686245
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    |||| |||||||||||||||| ||||||||||||  || ||||||||||||| |||||||||||| |||||| ||||||||||    
T  43686327 catccagtaatgcttgcaacatcttggacttacaaatattattttatcgttgacatctttaacatacaaacatagttgatgat 43686245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 206 - 287
Target Start/End: Original strand, 32593081 - 32593162
Alignment:
Q  206 atctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||  ||| |||| |||||||||||| ||||||||||| ||||| ||||||||||||||||||| ||||||||||    
T  32593081 atctagtaatatttgtaacatcttggacttacatgtactattttaacgttgacatctttaacatgcaaacatagttgatgat 32593162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 11071490 - 11071411
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    |||||||||||| |||||||| |||||||||||||||| |||||||||||||   |||||||||||| |||| ||||||||||    
T  11071490 catctagtaatgtttgcaacatcttggacttacaggtattattttatcgttg---tctttaacatgcgaacaaagttgatgat 11071411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 205 - 268
Target Start/End: Complemental strand, 22687518 - 22687455
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaaca 268  Q
    |||||| |||||||||||||| |||||||||||| |||||||||||||||||||||| ||||||    
T  22687518 catctattaatgcttgcaacatcttggacttacatgtactattttatcgttggcatccttaaca 22687455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 205 - 268
Target Start/End: Original strand, 26587966 - 26588029
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaaca 268  Q
    ||||||||||||| ||||||| |||||||||||| ||| |||||||||||||||||||||||||    
T  26587966 catctagtaatgcctgcaacatcttggacttacatgtattattttatcgttggcatctttaaca 26588029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 205 - 275
Target Start/End: Complemental strand, 7335080 - 7335010
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaac 275  Q
    ||||||||||||||||||||| |||||| |||||||||||||||||| || || ||||||||||| |||||    
T  7335080 catctagtaatgcttgcaacatcttggatttacaggtactattttattgtcggaatctttaacattcaaac 7335010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 205 - 279
Target Start/End: Original strand, 34362052 - 34362126
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagag 279  Q
    |||||||||||| |||||| | ||||||||||||| ||||||||||||||||  || ||||||||||||||||||    
T  34362052 catctagtaatgtttgcaatatcttggacttacagatactattttatcgttgatatttttaacatgcaaacagag 34362126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 4583206 - 4583124
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    |||| |||||||||||||||| |||| |||||||  || ||||| ||||||| |||||||||||| |||||| ||||||||||    
T  4583206 catccagtaatgcttgcaacatcttgaacttacaaatattatttgatcgttgacatctttaacatacaaacatagttgatgat 4583124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 240 - 287
Target Start/End: Original strand, 48928473 - 48928520
Alignment:
Q  240 gtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  48928473 gtactattttatcgttggcatttttaacatgcaaacatagttgatgat 48928520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 25691418 - 25691500
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    |||||||||||| ||||||||  ||| ||||||| ||  ||||||||||||  |||||||||| |||||||||||||| ||||    
T  25691418 catctagtaatgtttgcaacattttgaacttacatgtgttattttatcgttaacatctttaacgtgcaaacagagttgctgat 25691500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 71; Significance: 4e-32; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 3879811 - 3879893
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  3879811 catctagtaatgcttgcaacatcttggacttacaagtactattttatcgttgacatctttaacatgcaaacagagttgatgat 3879893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 6091054 - 6091136
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||| | |||||||| ||||||||||||||||||||    
T  6091054 catctagtaatgcttgcaacatcttggacttacaggtactattttatcgtttgaatctttaatatgcaaacagagttgatgat 6091136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 20768394 - 20768312
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| | ||||||||    
T  20768394 catctagtaatgcttgcaacaccttggacttacatgtactattttatcgttgacatctttaacatgcaaacataattgatgat 20768312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 208 - 287
Target Start/End: Complemental strand, 5627700 - 5627621
Alignment:
Q  208 ctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||||||    
T  5627700 ctagtaatgcttgcaacatcttggacttacaggtactattttatcgttgaaatctttaacatgcaaatagagttgatgat 5627621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 7234907 - 7234989
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    |||||||||||| |||||||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  7234907 catctagtaatgtttgcaacatcttggacttacatgtactattttatcgttggcatttttaacatgcaaacatagttgatgat 7234989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 1946146 - 1946064
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    |||||| ||||||||| |||| |||||||||||| |||||||||||||||||| |||||||||||||||| ||||||||||||    
T  1946146 catctaataatgcttgtaacatcttggacttacatgtactattttatcgttggaatctttaacatgcaaatagagttgatgat 1946064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 209 - 287
Target Start/End: Complemental strand, 6089211 - 6089133
Alignment:
Q  209 tagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    |||||||||||||||||  |||||||||| |||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  6089211 tagtaatgcttgcaacattttggacttactggtactattttatcgttggcatctttaacatggaaacagagttgctgat 6089133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 8513540 - 8513458
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||| |  |||||||||| |||||||||||||| ||||||||||||||||| ||||||||||| ||||    
T  8513540 catctagtaatgcttgcaagattttggacttaccggtactattttatcattggcatctttaacatggaaacagagttgctgat 8513458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 29182476 - 29182394
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||| ||||||||| ||| |||||||| |||||||||||||||||||||||||||| |||||| ||||||| ||||    
T  29182476 catctagtaatacttgcaacatcttagacttacaagtactattttatcgttggcatctttaacctgcaaatagagttgctgat 29182394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 209 - 287
Target Start/End: Original strand, 33892888 - 33892966
Alignment:
Q  209 tagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    |||||||| |||||||| |||||||||||| |||||||||||| ||||||||||||||||||||||| |||||| ||||    
T  33892888 tagtaatgtttgcaacatcttggacttacatgtactattttattgttggcatctttaacatgcaaactgagttgctgat 33892966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 33619142 - 33619055
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctt-----taacatgcaaacagagttgatgat 287  Q
    |||||||||||||||||||||  ||||||||||| ||||||||||||||||||||||||     ||||||||||||| ||||||||||    
T  33619142 catctagtaatgcttgcaacatattggacttacatgtactattttatcgttggcatctttaacttaacatgcaaacatagttgatgat 33619055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 4318694 - 4318776
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| ||||||||| |  ||||||||| ||||||| ||||||||||||| ||||||||||| ||||    
T  4318694 catctagtaatgcttgcaacatcttggactttcccgtactatttcatcgttgacatctttaacatgaaaacagagttgctgat 4318776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 21016990 - 21017066
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| ||| |||      ||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  21016990 catctagtaatgcttgcaacatcttagac------gtactattttatcgttgacatatttaacatgcaaacagagttgatgat 21017066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 231 - 287
Target Start/End: Original strand, 30353256 - 30353312
Alignment:
Q  231 gacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    |||||||| ||||||||||||||||| ||| ||||||||||||||||||||| ||||    
T  30353256 gacttacatgtactattttatcgttgacatttttaacatgcaaacagagttgctgat 30353312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 209 - 264
Target Start/End: Original strand, 7054649 - 7054704
Alignment:
Q  209 tagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatcttt 264  Q
    |||||||| |||||||| ||||||||||||| ||||||||||||||||| ||||||    
T  7054649 tagtaatgtttgcaacatcttggacttacagttactattttatcgttggaatcttt 7054704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 71; Significance: 4e-32; HSPs: 54)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 699462 - 699380
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||    
T  699462 catctagtaatgcttgcaacatcttggacttacagatactattttatcgttggcatctttaacatgcaaacatagttgatgat 699380  T

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Target: chr5; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 5830204 - 5830122
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||    
T  5830204 catctagtaatgcttgcaacatcttggacttacatgtactattttatcgttggaatctttaacatgcaaacagagttgatgat 5830122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 31786509 - 31786591
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  31786509 catctagtaatgcttgcaacatcttggatttacaggtactattttatcgttggcatctttaacatgcaatcagagttgatgat 31786591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 205 - 281
Target Start/End: Original strand, 15992403 - 15992479
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagtt 281  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  15992403 catctagtaatgcttgcaacatcttggacttaccggtactattttatcgttggcatctttaacatgcaaacagagtt 15992479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 1429025 - 1429107
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | |||| |||||    
T  1429025 catctagtaatgcttgcaacatcttggacttacaggtactattttatcgttggcatctttaacatgcaaataaagtttatgat 1429107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 13956225 - 13956307
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  13956225 catctagtaatgcttgcaacatcttggactaacaggtactattttatcgttggcatctttaacatgcaaacaaatttgatgat 13956307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 24886399 - 24886317
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||| ||||| |||||||||||||||||||||||||||||    
T  24886399 catctagtaatgcttgcaacatcttggacttacatgtactattttattgttggaatctttaacatgcaaacagagttgatgat 24886317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 35826349 - 35826431
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||||||||  |||||||||||||||||||||||||||||    
T  35826349 catctagtaatgcttgcaacatcttggacttacatgtactattttatcgttgaaatctttaacatgcaaacagagttgatgat 35826431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 210 - 287
Target Start/End: Original strand, 23116090 - 23116167
Alignment:
Q  210 agtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    |||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  23116090 agtaatgcttgcaacatcttggacttacaggtactattttatcgttgacatctttaacatgcaaacagatttgatgat 23116167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 205 - 284
Target Start/End: Complemental strand, 8437277 - 8437198
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgat 284  Q
    |||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  8437277 catctagtaatgttttcaacatcttggacttacaggtactattttatcgttggcatctttaacattcaaacagagttgat 8437198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 2888308 - 2888390
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||||||| ||||||||||||||||||| | ||||||||    
T  2888308 catctagtaatgcttgtaacatcttggacttacaggtactattttatcgttgacatctttaacatgcaaacatatttgatgat 2888390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 9200536 - 9200454
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| ||| |||||| || |||||||||||||||||||||||||||||||||||||||||| ||||    
T  9200536 catctagtaatgcttgcaacatcttagacttatagatactattttatcgttggcatctttaacatgcaaacagagttgctgat 9200454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 22255494 - 22255412
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    |||||||||| |||||||||| ||||||||||||||||||||||||||||||| || ||||||||||||||| ||||||||||    
T  22255494 catctagtaaggcttgcaacatcttggacttacaggtactattttatcgttggaatatttaacatgcaaacatagttgatgat 22255412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 22981105 - 22981023
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    |||||||||||| |||||||| ||||||||||||  ||||||||||||||||||||||||||||||||||||||||| |||||    
T  22981105 catctagtaatgattgcaacatcttggacttacatatactattttatcgttggcatctttaacatgcaaacagagtttatgat 22981023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 25669888 - 25669806
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    |||||||||||||||||||||  || |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  25669888 catctagtaatgcttgcaacattttagacttacatgtactattttatcgttgacatctttaacatgcaaacagagttgatgat 25669806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 25889682 - 25889600
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||| ||||| |||||| |||||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  25889682 catctagtaatgctttcaacatcttggatttacaggtactattttattgttggtatctttaacatgcaaacagagttgatgat 25889600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 31705475 - 31705557
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| |||||||||| | ||||||||||||| |||| |||||||||||||||||||||||||||||    
T  31705475 catctagtaatgcttgcaacatcttggacttatatgtactattttatctttggaatctttaacatgcaaacagagttgatgat 31705557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 209 - 287
Target Start/End: Original strand, 35511349 - 35511427
Alignment:
Q  209 tagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  35511349 tagtaatgcttgcaacatcttgaacttacatgtactattttatcgttggcatctttaacatgcaaacagatttgatgat 35511427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 42343033 - 42342951
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| ||| |||||||| || |||||||||||||| ||||||||||||||||||||||||||||||    
T  42343033 catctagtaatgcttgcaacatcttagacttacatgtcctattttatcgttgacatctttaacatgcaaacagagttgatgat 42342951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 206 - 283
Target Start/End: Complemental strand, 33908544 - 33908467
Alignment:
Q  206 atctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttga 283  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| |||||| ||||||    
T  33908544 atctagtaatgcttgcaacatcttggacttacatgtactattttatcgttggcatctttaacatacaaacatagttga 33908467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 5837867 - 5837785
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||| |||||| ||||||||||||||||| ||||||| ||||    
T  5837867 catctagtaatgcttgcaacatcttggacttgcaggtactattttgtcgttgtcatctttaacatgcaaagagagttgctgat 5837785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 205 - 283
Target Start/End: Original strand, 7208727 - 7208805
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttga 283  Q
    ||||||||||| ||||||||| |||| ||||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  7208727 catctagtaatacttgcaacatcttgaacttacatgtactattttatcgttggaatctttaacatgcaaacagagttga 7208805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 209 - 287
Target Start/End: Original strand, 14409208 - 14409286
Alignment:
Q  209 tagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    |||||||| |||||||| |||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  14409208 tagtaatgtttgcaacatcttggacttacaagtactattttatcgttgacatctttaacatgcaaacatagttgatgat 14409286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 19120171 - 19120089
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| ||| |||||  |||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  19120171 catctagtaatgcttgcaacatcttagactttgaggtactattttatcgttggcatctttaacatgcaaacggagttgctgat 19120089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 205 - 282
Target Start/End: Complemental strand, 7693533 - 7693456
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttg 282  Q
    ||||||||||||||||||||| ||| |||||||| ||| ||||||||||||| |||||||||||||||||||||||||    
T  7693533 catctagtaatgcttgcaacatcttagacttacaagtattattttatcgttgacatctttaacatgcaaacagagttg 7693456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 205 - 282
Target Start/End: Original strand, 8741748 - 8741825
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttg 282  Q
    |||||||| ||||||||||||  ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  8741748 catctagtgatgcttgcaacattttggacttacatgtactattttatcgttgacatctttaacatgcaaacagagttg 8741825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 206 - 287
Target Start/End: Complemental strand, 32563451 - 32563370
Alignment:
Q  206 atctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    |||||||||| ||||||||| ||| |||||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  32563451 atctagtaattcttgcaacatcttagacttacatgtactattttatcgttggcatctataacatgcaaacagagttgctgat 32563370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 205 - 269
Target Start/End: Original strand, 25500789 - 25500853
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacat 269  Q
    ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||    
T  25500789 catctagtaatgcttgcaacatcttagacttacaggtactattttatcgttggcatctttaacat 25500853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 205 - 284
Target Start/End: Original strand, 17157894 - 17157973
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgat 284  Q
    ||||||||||||||||||||| |||||||||| | |||||||||||||||||  ||||||| ||||||||||||||||||    
T  17157894 catctagtaatgcttgcaacatcttggacttaaaagtactattttatcgttgaaatctttatcatgcaaacagagttgat 17157973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 205 - 284
Target Start/End: Original strand, 22973945 - 22974024
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgat 284  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||| || |  ||||||||||||||||||||||||||    
T  22973945 catctagtaatgcttgcaacatcttggacttacatgtactattttattgtcgaaatctttaacatgcaaacagagttgat 22974024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 205 - 284
Target Start/End: Complemental strand, 35504677 - 35504598
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgat 284  Q
    ||||||||||| ||||||||| |||||||||||| |||||||||||||||||  |||||||||||||||||||| |||||    
T  35504677 catctagtaatacttgcaacatcttggacttacatgtactattttatcgttgaaatctttaacatgcaaacagatttgat 35504598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 12910667 - 12910585
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| |||||||||||| ||| |||| ||| ||||||||||||||||| ||| |||||||||||||    
T  12910667 catctagtaatgcttgcaacatcttggacttacatgtattattgtattgttggcatctttaacatacaaccagagttgatgat 12910585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 22019935 - 22019853
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||| ||||| ||| |||||||| ||| ||||||||||||||||||||||||||||||| ||||||| ||||    
T  22019935 catctagtaatgcttacaacatcttagacttacaagtattattttatcgttggcatctttaacatgcaaatagagttgctgat 22019853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 38528100 - 38528182
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||||||||  |||||||||||| ||| ||| ||||||||    
T  38528100 catctagtaatgcttgcaacatcttggacttacaagtactattttatcgttgatatctttaacatgtaaatagatttgatgat 38528182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 43308523 - 43308605
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||||| || || |||||||||||||||  ||||||||||||    
T  43308523 catctagtaatgcttgcaacatcttcgacttacaggtactattttattgtcggaatctttaacatgcaagaagagttgatgat 43308605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 208 - 287
Target Start/End: Complemental strand, 35934205 - 35934126
Alignment:
Q  208 ctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    |||||||||||||||||| ||||||||||| ||||||||||||| |||| ||||||||||||| ||||| ||||| ||||    
T  35934205 ctagtaatgcttgcaacatcttggacttaccggtactattttattgttgacatctttaacatggaaacaaagttgctgat 35934126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 205 - 268
Target Start/End: Complemental strand, 39573123 - 39573060
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaaca 268  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||||| |||||||||||||||    
T  39573123 catctagtaatgcttgcaacatcttggacttacatgtactattttatcattggcatctttaaca 39573060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 21088629 - 21088711
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||| ||||| |||||| |||||| |  |||||||||||||||||||||||||| |||||| ||||||||||    
T  21088629 catctagtaatgcttacaacatcttggatttacagatgttattttatcgttggcatctttaacatacaaacatagttgatgat 21088711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 27330616 - 27330534
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| |||||||||||| |||| ||||||| ||||  |||||||||||||||| ||||||| ||||    
T  27330616 catctagtaatgcttgcaacatcttggacttacatgtaccattttattgttgaaatctttaacatgcaaatagagttgctgat 27330534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 209 - 287
Target Start/End: Complemental strand, 36860732 - 36860654
Alignment:
Q  209 tagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||| ||||||||||||  || ||||||||||||| |||||||||||| |||||| ||||||||||    
T  36860732 tagtaatgcttgcaacatcttggacttacaaatattattttatcgttgacatctttaacatacaaacatagttgatgat 36860654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 40133697 - 40133615
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    |||| |||||||||||||||| ||||||||||||  || ||||||||||||| |||||||||||| |||||| ||||||||||    
T  40133697 catccagtaatgcttgcaacatcttggacttacaaatattattttatcgttgacatctttaacatacaaacatagttgatgat 40133615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 36867074 - 36866992
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    |||| ||||||| |||||||| ||||||||||||  || ||||||||||||| |||||||||||| |||||| ||||||||||    
T  36867074 catccagtaatgtttgcaacatcttggacttacaaatattattttatcgttgacatctttaacatacaaacatagttgatgat 36866992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 15724800 - 15724718
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||| ||| |  ||||||||||| |||||||||||| |||| ||||||||||||| ||||| ||||| ||||    
T  15724800 catctagtaatgcttacaatattttggacttacaagtactattttatagttgacatctttaacatgtaaacaaagttgttgat 15724718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 30969187 - 30969269
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||| |||||| || |||| ||||| || ||||||||||| |||| ||||||||||||||||||| ||||| ||||    
T  30969187 catctagtaatacttgcagcatcttgaacttatagatactattttattgttgacatctttaacatgcaaacaaagttgctgat 30969269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 205 - 282
Target Start/End: Original strand, 6824344 - 6824420
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttg 282  Q
    |||||||| |||||||||||| ||| |||||||| ||| | ||||||| ||| |||||||||||||||||||||||||    
T  6824344 catctagtgatgcttgcaacatcttagacttacatgtattgttttatc-ttgacatctttaacatgcaaacagagttg 6824420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 205 - 261
Target Start/End: Original strand, 28416414 - 28416470
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatc 261  Q
    |||| |||||||||||||||| |||||||||| | ||||||||||||||||||||||    
T  28416414 catcaagtaatgcttgcaacatcttggacttaaaagtactattttatcgttggcatc 28416470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 240 - 287
Target Start/End: Original strand, 27318385 - 27318432
Alignment:
Q  240 gtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||    
T  27318385 gtactattttatcgttgaaatctttaacatgcaaacagagttgatgat 27318432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 227 - 287
Target Start/End: Original strand, 23954675 - 23954734
Alignment:
Q  227 cttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    |||| |||||||  || ||||||||||||||||| ||||||||||||||||||||||||||    
T  23954675 cttgcacttacaaatattattttatcgttggcat-tttaacatgcaaacagagttgatgat 23954734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 8467038 - 8466957
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    |||||||||||||||||||||  |||||||||||  || ||||||||||||  || |||||| ||| ||||||||||| ||||    
T  8467038 catctagtaatgcttgcaacattttggacttacaaataatattttatcgtt-acacctttaatatgtaaacagagttggtgat 8466957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 287
Target Start/End: Original strand, 14919431 - 14919473
Alignment:
Q  245 attttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||| ||||| |||||||||||||||||||||||||||||    
T  14919431 attttattgttggaatctttaacatgcaaacagagttgatgat 14919473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 91 - 125
Target Start/End: Complemental strand, 25889798 - 25889764
Alignment:
Q  91 aaagggagcttctacgctgcagtcaggaaactgac 125  Q
    |||||||||||||||| ||||||||||||||||||    
T  25889798 aaagggagcttctacgatgcagtcaggaaactgac 25889764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 125
Target Start/End: Original strand, 35511230 - 35511263
Alignment:
Q  92 aagggagcttctacgctgcagtcaggaaactgac 125  Q
    ||||||||||||||| ||||||||||||||||||    
T  35511230 aagggagcttctacggtgcagtcaggaaactgac 35511263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 124
Target Start/End: Original strand, 14409089 - 14409121
Alignment:
Q  92 aagggagcttctacgctgcagtcaggaaactga 124  Q
    ||||||||||||||| |||||||||||||||||    
T  14409089 aagggagcttctacggtgcagtcaggaaactga 14409121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 125
Target Start/End: Original strand, 23954547 - 23954583
Alignment:
Q  89 ttaaagggagcttctacgctgcagtcaggaaactgac 125  Q
    |||||||||||||||| | ||||||||||||||||||    
T  23954547 ttaaagggagcttctatggtgcagtcaggaaactgac 23954583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 71; Significance: 4e-32; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 11357254 - 11357336
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||    
T  11357254 catctagtaatgcttgcaacatcttggacttacaagtactattttatcgttggtatctttaacatgcaaacagagttgatgat 11357336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 26941133 - 26941215
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||    
T  26941133 catctagtaatgcttgcaacatcttggacttacatgtactattttatcgttggaatctttaacatgcaaacagagttgatgat 26941215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 34133238 - 34133156
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  34133238 catctagtaatgcttgcaacatcttggacttacaggtactattttatcgttggcatctttaacatgcaaacaaaattgatgat 34133156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 2008235 - 2008153
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  2008235 catctagtaatgcttgcaacatcttggacttacaagtactattttatcgttgtcatctttaacatgcaaacagagttgctgat 2008153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 29099649 - 29099567
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| |||||||||| |||||||||||||||||| |||||||||||||||||||||||||| ||||    
T  29099649 catctagtaatgcttgcaacatcttggacttaaaggtactattttatcgttagcatctttaacatgcaaacagagttgctgat 29099567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 40552132 - 40552214
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| | |||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||    
T  40552132 catctagtaatgcttgcaacatcatggacttacatgtactattttatcgttggaatctttaacatgcaaacagagttgatgat 40552214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 46297635 - 46297717
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| ||||||||||||  ||||||||||||||||| |||||||||||||||||||||||||||||    
T  46297635 catctagtaatgcttgcaacatcttggacttacaaatactattttatcgttggaatctttaacatgcaaacagagttgatgat 46297717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 51212644 - 51212726
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| || || |||||||||||||||||||||||||||||    
T  51212644 catctagtaatgcttgcaacatcttggacttacaggtactattttattgtcggaatctttaacatgcaaacagagttgatgat 51212726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 52040795 - 52040877
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    |||||||||||| |||||||| |||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  52040795 catctagtaatgtttgcaacatcttggacttacatgtactattttatcgttgacatctttaacatgcaaacagagttgatgat 52040877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 205 - 282
Target Start/End: Complemental strand, 33698456 - 33698379
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttg 282  Q
    ||||||||||||||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33698456 catctagtaatgcttgcaatatcttagacttacaggtactattttatcgttggcatctttaacatgcaaacagagttg 33698379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 7327355 - 7327437
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  7327355 catctagtaatgcttgcaacatcttagacttacaagtactattttatcgttggcatctttaacatgcaaatagagttgttgat 7327437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 22451271 - 22451189
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||| |||| ||||||||||||||||||| ||||||||||    
T  22451271 catctagtaatgcttgcaacatcttggacttacatgtactattttattgttgacatctttaacatgcaaacatagttgatgat 22451189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 22622591 - 22622673
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||||||| |||||||| ||||||||    
T  22622591 catctagtaatgcttgcaacatcttggacttacatgtactattttatcgttgacatctttaacatccaaacagatttgatgat 22622673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 42505948 - 42506030
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||| ||||  |||||||||    
T  42505948 catctagtaatgcttgcaacatcttggacttacaggtactattttatcgttggaatctttaacatgcgaacaacgttgatgat 42506030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 45174809 - 45174727
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| ||||||||||| | |||||||||||||||||||||||||||||| ||||||||||| ||||    
T  45174809 catctagtaatgcttgcaacatcttggacttaccgttactattttatcgttggcatctttaacatggaaacagagttgctgat 45174727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 53229025 - 53229107
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| |||| ||||||| ||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  53229025 catctagtaatgcttgcaacatcttgaacttacatgtattattttatcgttggcatctttaacatgcaaacaaagttgatgat 53229107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 206 - 287
Target Start/End: Original strand, 44186391 - 44186472
Alignment:
Q  206 atctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    |||||||||||||||||||| ||| |||||| ||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  44186391 atctagtaatgcttgcaacatcttagacttagaggtactattttatcattggcatctttaacatgcaaacagagttgttgat 44186472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 205 - 276
Target Start/End: Complemental strand, 4015762 - 4015691
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaaca 276  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  4015762 catctagtaatgcttgcaacatcttggacttacatgtactattttaccgttggcatctttaacatgcaaaca 4015691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 21009675 - 21009757
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||||||||||| |||||||||||||||| |  |||||||||    
T  21009675 catctagtaatgcttgcaacatcttagacttacaggtactattttatcgttggaatctttaacatgcaaatattgttgatgat 21009757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 29164112 - 29164030
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    |||||||||||||||| |||| ||| |||||||| |||||||||||||||| |||||||||||||||||||||||||| ||||    
T  29164112 catctagtaatgcttgtaacatcttagacttacaagtactattttatcgttagcatctttaacatgcaaacagagttgctgat 29164030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 32373773 - 32373691
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| ||| |||||||| ||||||||||||||||| ||||||||| ||||||||||||||| ||||    
T  32373773 catctagtaatgcttgcaacatcttagacttacaagtactattttatcgttgacatctttaatatgcaaacagagttgctgat 32373691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 48355244 - 48355162
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||| ||||||||| ||||||||||||| ||||||||||| || || |||||||||||||||||||||||||||||    
T  48355244 catctagtaatacttgcaacatcttggacttacagatactattttattgtcggaatctttaacatgcaaacagagttgatgat 48355162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 206 - 287
Target Start/End: Original strand, 14586554 - 14586634
Alignment:
Q  206 atctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    |||||||||||||||||||| ||||||||||| | |||||||||||||||||||||||||||||||||||| ||||| ||||    
T  14586554 atctagtaatgcttgcaacatcttggacttaccg-tactattttatcgttggcatctttaacatgcaaacatagttgttgat 14586634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 206 - 287
Target Start/End: Original strand, 24707989 - 24708070
Alignment:
Q  206 atctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||| |||||||||||||  |||||||||||| ||||||||||||||||||||||||||||||||||||| | ||||||||    
T  24707989 atctaataatgcttgcaacttcttggacttacatgtactattttatcgttggcatctttaacatgcaaacaaatttgatgat 24708070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 205 - 286
Target Start/End: Original strand, 33378658 - 33378739
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatga 286  Q
    |||||||||||| |||||||| |||| ||||||| ||||||||||||||||| ||||||||||||||||||| |||||||||    
T  33378658 catctagtaatgtttgcaacatcttgaacttacatgtactattttatcgttgacatctttaacatgcaaacatagttgatga 33378739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 206 - 282
Target Start/End: Complemental strand, 40936275 - 40936199
Alignment:
Q  206 atctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttg 282  Q
    |||||||||||||||||||| ||| ||||| || |||||||||||||||||||||||||||||||||||| ||||||    
T  40936275 atctagtaatgcttgcaacatcttagacttgcatgtactattttatcgttggcatctttaacatgcaaacggagttg 40936199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 205 - 276
Target Start/End: Original strand, 43975765 - 43975836
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaaca 276  Q
    ||||||||||||||||||| | |||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  43975765 catctagtaatgcttgcaaaatcttggacttacaagtactattttatcgttggcatctttaacatgtaaaca 43975836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 24488835 - 24488917
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| |||| |||||| |  |||||||||| |||||||||||||||||||||| ||||||||||||    
T  24488835 catctagtaatgcttgcaacatcttgaacttactgacactattttattgttggcatctttaacatgcaaatagagttgatgat 24488917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 44891800 - 44891718
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| ||| |||||  ||||||||||||||||||| |||||||||||| |||||||||||| ||||    
T  44891800 catctagtaatgcttgcaacatcttagacttgtaggtactattttatcgttgacatctttaacatacaaacagagttgctgat 44891718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 50475114 - 50475032
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| |||||||||||| ||| ||||||||| ||| ||||||||| ||||||||||| ||||||||    
T  50475114 catctagtaatgcttgcaacatcttggacttacaagtattattttatccttgacatctttaatatgcaaacagatttgatgat 50475032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 206 - 287
Target Start/End: Original strand, 54828575 - 54828656
Alignment:
Q  206 atctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    |||||||||||||||||||| |||||||||||| |||||||||||| ||||| || |||||||| |||||| ||||||||||    
T  54828575 atctagtaatgcttgcaacatcttggacttacatgtactattttatagttggaatttttaacatacaaacatagttgatgat 54828656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 205 - 289
Target Start/End: Complemental strand, 1089996 - 1089913
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgatgt 289  Q
    ||||||||||||||||||| | |||||| ||| | ||||||||||||||||||||||||||||||||||| ||||||| ||||||    
T  1089996 catctagtaatgcttgcaaaatcttggattta-atgtactattttatcgttggcatctttaacatgcaaatagagttgttgatgt 1089913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 205 - 289
Target Start/End: Complemental strand, 3362558 - 3362474
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgatgt 289  Q
    |||| ||||||||||||||||  ||||||||  | |||| |||||||||||| ||||||||||||||||||||||||||||||||    
T  3362558 catccagtaatgcttgcaacatattggacttctaagtacaattttatcgttgacatctttaacatgcaaacagagttgatgatgt 3362474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 25580042 - 25579960
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||| | ||| || ||| ||||||  ||||||||||||||||||||||||||||||||||||| ||||    
T  25580042 catctagtaatgcttgcaatatcttagatttataggtacagttttatcgttggcatctttaacatgcaaacagagttgctgat 25579960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 209 - 287
Target Start/End: Complemental strand, 43348556 - 43348478
Alignment:
Q  209 tagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||| |||  ||||||| ||||||||||||||||| ||||||||||||||||| ||||||| ||||    
T  43348556 tagtaatgcttgcaacatcttaaacttacaagtactattttatcgttgacatctttaacatgcaaatagagttgttgat 43348478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 46994534 - 46994616
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||| || || ||||||| |||||||||| | ||||||||    
T  46994534 catctagtaatgcttgcaatatcttggacttacaggtactattttattgtcggaatctttagcatgcaaacataattgatgat 46994616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 47481825 - 47481743
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| |||| ||||||| |||||||||||||||||  |||||||| ||||||| |||||| |||||    
T  47481825 catctagtaatgcttgcaacatcttgaacttacaagtactattttatcgttgaaatctttaatatgcaaatagagtttatgat 47481743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 206 - 287
Target Start/End: Original strand, 3655076 - 3655157
Alignment:
Q  206 atctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    |||||||||||||||||||| |||||||||| | ||  |||||||||| ||| ||||||||||||||||||||| |||||||    
T  3655076 atctagtaatgcttgcaacatcttggacttatatgtgttattttatcgatggaatctttaacatgcaaacagagctgatgat 3655157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 227 - 287
Target Start/End: Original strand, 20373139 - 20373199
Alignment:
Q  227 cttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    |||||||||| | |||||||||||||||||| |||||||||||||||||||||||||||||    
T  20373139 cttggacttatatgtactattttatcgttggaatctttaacatgcaaacagagttgatgat 20373199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 212 - 287
Target Start/End: Original strand, 11357030 - 11357105
Alignment:
Q  212 taatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    |||||||||||||| ||||||||||||  |||||||||||| ||||||| |||||||| ||| |||||||||||||    
T  11357030 taatgcttgcaacatcttggacttacaaatactattttatcattggcatatttaacatacaaccagagttgatgat 11357105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 205 - 276
Target Start/End: Complemental strand, 36012442 - 36012371
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaaca 276  Q
    |||||||||||||||||| ||  |||||||||  |||||||||||||||||||||||||||||||| |||||    
T  36012442 catctagtaatgcttgcagcattttggacttatcggtactattttatcgttggcatctttaacatggaaaca 36012371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 205 - 276
Target Start/End: Complemental strand, 37158011 - 37157940
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaaca 276  Q
    ||||||||||||||||| |||  ||||||||||| ||||||||||||| |||||||||||||||| ||||||    
T  37158011 catctagtaatgcttgcgacatattggacttacatgtactattttatcattggcatctttaacatacaaaca 37157940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 22445938 - 22446020
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    |||| |||||| |||||||||  ||||||||| |||||||||||||||||||| |||||||| ||||||| | ||||||||||    
T  22445938 catccagtaatacttgcaacattttggacttaaaggtactattttatcgttggtatctttaatatgcaaaaatagttgatgat 22446020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 39282955 - 39282873
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    |||||||||||||||||||||  ||||| |||||| ||||||||||| |||| ||||||||||| ||||||| | ||||||||    
T  39282955 catctagtaatgcttgcaacattttggatttacagatactattttattgttgacatctttaacaggcaaacatatttgatgat 39282873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 54506110 - 54506028
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    |||||||||||||||||||||  ||||||||| |  ||||||||||||||||| |||||||||||||||| | ||| ||||||    
T  54506110 catctagtaatgcttgcaacattttggacttataaatactattttatcgttggaatctttaacatgcaaataaagtagatgat 54506028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 228 - 276
Target Start/End: Original strand, 27480258 - 27480306
Alignment:
Q  228 ttggacttacaggtactattttatcgttggcatctttaacatgcaaaca 276  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  27480258 ttggacttacatgtactattttatcgttggcatctttaacatgcaaaca 27480306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 205 - 276
Target Start/End: Complemental strand, 37203371 - 37203300
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaaca 276  Q
    ||||||||||||||||| | |  ||||||||||||||||||||||||| ||| |||||||||||| ||||||    
T  37203371 catctagtaatgcttgcgatatattggacttacaggtactattttatcattgacatctttaacatacaaaca 37203300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 4761521 - 4761603
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||| |||||| ||||||||  ||||||||| |||||||||||||| || || |||||||||||||||| | ||||||||||    
T  4761521 catctggtaatgtttgcaacattttggacttataggtactattttattgtcggaatctttaacatgcaaatatagttgatgat 4761603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 209 - 287
Target Start/End: Complemental strand, 21193906 - 21193828
Alignment:
Q  209 tagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    |||||||| |||||||| |||| |||||| | ||||||||||||||  | |||||||||||||||||||||||| ||||    
T  21193906 tagtaatggttgcaacatcttgaacttacggctactattttatcgtgagaatctttaacatgcaaacagagttgctgat 21193828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 218 - 287
Target Start/End: Complemental strand, 11467114 - 11467045
Alignment:
Q  218 ttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    |||||||| ||| ||||| ||||||||||||| ||||||| ||||| |||||||||||||||||| ||||    
T  11467114 ttgcaacatcttagacttgcaggtactattttgtcgttggtatcttaaacatgcaaacagagttgttgat 11467045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 205 - 274
Target Start/End: Original strand, 53811607 - 53811676
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaa 274  Q
    ||||||| ||||| ||||||| |||||||||||  ||| |||||||||||||| ||||||||||||||||    
T  53811607 catctaggaatgcctgcaacatcttggacttacgagtattattttatcgttggtatctttaacatgcaaa 53811676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 212 - 287
Target Start/End: Complemental strand, 38591994 - 38591919
Alignment:
Q  212 taatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    |||||||||||||| |||||| |||||  |||| ||||||||||| ||||||| ||||||||| ||| ||||||||    
T  38591994 taatgcttgcaacatcttggatttacaaatacttttttatcgttgtcatctttgacatgcaaatagatttgatgat 38591919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 255
Target Start/End: Original strand, 11835510 - 11835556
Alignment:
Q  209 tagtaatgcttgcaacaccttggacttacaggtactattttatcgtt 255  Q
    |||||||| |||||||| ||||||||||||  |||||||||||||||    
T  11835510 tagtaatgtttgcaacatcttggacttacaaatactattttatcgtt 11835556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 125
Target Start/End: Complemental strand, 37203486 - 37203453
Alignment:
Q  92 aagggagcttctacgctgcagtcaggaaactgac 125  Q
    ||||||||||||||| ||||||||||||||||||    
T  37203486 aagggagcttctacggtgcagtcaggaaactgac 37203453  T

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Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 125
Target Start/End: Complemental strand, 37158125 - 37158093
Alignment:
Q  93 agggagcttctacgctgcagtcaggaaactgac 125  Q
    |||||||||||||| ||||||||||||||||||    
T  37158125 agggagcttctacggtgcagtcaggaaactgac 37158093  T

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Target: chr2 (Bit Score: 71; Significance: 4e-32; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 7006829 - 7006911
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  7006829 catctagtaatgcttgcaacatcttggacttacaagtactattttatcgttggcatctttaacatgcaaacagagttgctgat 7006911  T

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Target: chr2; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 207 - 287
Target Start/End: Complemental strand, 44913974 - 44913894
Alignment:
Q  207 tctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    |||| |||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  44913974 tctaataatgcttgcaacatcttggacttacatgtactattttatcgttggcatctttaacatgcaaacagagttgatgat 44913894  T

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Target: chr2; HSP #3
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 11366272 - 11366354
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||||||    
T  11366272 catctagtaatgcttgcaacatcttggacttacaggtactattttatcgttgaaatctttaacatgcaaatagagttgatgat 11366354  T

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Target: chr2; HSP #4
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 41961152 - 41961070
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| || ||||||||    
T  41961152 catctagtaatgcttgcaacatcttggacttacaggtattattttatcgttggcatctttaacatgcaaaccgatttgatgat 41961070  T

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Target: chr2; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 205 - 280
Target Start/End: Original strand, 18494172 - 18494247
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagt 280  Q
    ||||||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  18494172 catctagtaatgcttacaacatcttggacttacatgtactattttatcgttggcatctttaacatgcaaacagagt 18494247  T

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Target: chr2; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 208 - 287
Target Start/End: Complemental strand, 4763940 - 4763861
Alignment:
Q  208 ctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    |||||||||||||||| | ||||||||||||||||||||||||||||| |||||||||||||||||| ||| ||||||||    
T  4763940 ctagtaatgcttgcaatatcttggacttacaggtactattttatcgttagcatctttaacatgcaaaaagaattgatgat 4763861  T

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Target: chr2; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 2325269 - 2325351
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| |||||| |||||||||||||||||||||||  |||||||||||||||||| | ||||||||    
T  2325269 catctagtaatgcttgcaacatcttggatttacaggtactattttatcgttgtaatctttaacatgcaaacaaatttgatgat 2325351  T

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Target: chr2; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 4263967 - 4264049
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| |||| ||||| | |||||||||||| |||||||||||||||||||||||||||||| ||||    
T  4263967 catctagtaatgcttgcaacatcttgaacttatatgtactattttattgttggcatctttaacatgcaaacagagttgctgat 4264049  T

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Target: chr2; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 4478677 - 4478595
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| ||||||||||| | |||||||||||| ||||||||||||||||| ||||||||||| ||||    
T  4478677 catctagtaatgcttgcaacatcttggacttaccgatactattttatcattggcatctttaacatggaaacagagttggtgat 4478595  T

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Target: chr2; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 33709123 - 33709205
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| |||||| ||||| ||||||||||||| ||| ||||||||||||||||||||||||| ||||    
T  33709123 catctagtaatgcttgcaacatcttggatttacaagtactattttatcattgacatctttaacatgcaaacagagttgctgat 33709205  T

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Target: chr2; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 39167260 - 39167342
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    |||||||||||||| ||||||  ||||||||||| ||||||||||||||||| |||||||||||| |||||||||||||||||    
T  39167260 catctagtaatgctagcaacaatttggacttacatgtactattttatcgttgacatctttaacatacaaacagagttgatgat 39167342  T

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Target: chr2; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 209 - 287
Target Start/End: Complemental strand, 41465809 - 41465731
Alignment:
Q  209 tagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    |||||||| |||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||| | ||||||||    
T  41465809 tagtaatgtttgcaacatcttggacttacatgtactattttatcgttggcatctttaacatgcaaacataattgatgat 41465731  T

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Target: chr2; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 43770739 - 43770821
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| |||| ||||| || ||||||||||| |||||||||||||||||||||||||||||| ||||    
T  43770739 catctagtaatgcttgcaacatcttgaacttaaagatactattttattgttggcatctttaacatgcaaacagagttgctgat 43770821  T

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Target: chr2; HSP #14
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 205 - 281
Target Start/End: Original strand, 27349839 - 27349915
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagtt 281  Q
    ||||||||||||||||||||| ||| ||||||||| ||||||||||||||||| ||||||||| |||||||||||||    
T  27349839 catctagtaatgcttgcaacatcttagacttacagatactattttatcgttggaatctttaacttgcaaacagagtt 27349915  T

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Target: chr2; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 205 - 276
Target Start/End: Complemental strand, 26357889 - 26357818
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaaca 276  Q
    ||||||||||||||||||||| |||||||||| |  ||||||||||||||||||||||||||||||||||||    
T  26357889 catctagtaatgcttgcaacatcttggacttaaaaatactattttatcgttggcatctttaacatgcaaaca 26357818  T

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Target: chr2; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 212 - 287
Target Start/End: Complemental strand, 45328025 - 45327950
Alignment:
Q  212 taatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    |||||||||||||| |||||||||||| ||||||||||||||||| ||||||||||||||||||| |||| |||||    
T  45328025 taatgcttgcaacatcttggacttacatgtactattttatcgttgacatctttaacatgcaaacatagtttatgat 45327950  T

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Target: chr2; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 3177251 - 3177169
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    |||||||||||||||| || | |||||||||||| |||||||||||| |||| ||||||||||||||||||| ||||||||||    
T  3177251 catctagtaatgcttgtaatatcttggacttacatgtactattttatagttgacatctttaacatgcaaacatagttgatgat 3177169  T

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Target: chr2; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 13711771 - 13711689
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||| || |||||||| ||| ||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  13711771 catctagtattgtttgcaacatcttagacttacaggtactattttatcgctggcatctttaacatgcatacagagttgctgat 13711689  T

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Target: chr2; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 19289214 - 19289296
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||| | |||||||||||||||| |||||||| || || |||||||||||||| ||||||||||||||    
T  19289214 catctagtaatgcttgcaatatcttggacttacaggtattattttattgtcggaatctttaacatgcacacagagttgatgat 19289296  T

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Target: chr2; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 31570625 - 31570707
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||| ||||||||||||| |||  ||||||| ||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  31570625 catctagcaatgcttgcaacatcttaaacttacaagtactattttatcgttggcatctttaacatgtaaacagagttgttgat 31570707  T

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Target: chr2; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 33550878 - 33550960
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    |||||||||||||||||||||  |||||||| || |||||||||||||||||  |||||||||||||||||| ||||||||||    
T  33550878 catctagtaatgcttgcaacatattggactttcaagtactattttatcgttgaaatctttaacatgcaaacatagttgatgat 33550960  T

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Target: chr2; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 33660268 - 33660350
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| ||  ||||||||| |||||||||||||||| ||||||||||||||||||| ||||| ||||    
T  33660268 catctagtaatgcttgcaacatctcagacttacagatactattttatcgttgacatctttaacatgcaaacaaagttgctgat 33660350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 212 - 282
Target Start/End: Complemental strand, 36642293 - 36642223
Alignment:
Q  212 taatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttg 282  Q
    |||||||||||||| |||| |||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  36642293 taatgcttgcaacatcttgaacttaccggtactattttatcgttggcatctttaacatggaaacagagttg 36642223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 205 - 276
Target Start/End: Complemental strand, 5881841 - 5881770
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaaca 276  Q
    ||||||||||||||||||||| ||| |||||||| |||||||||||| |||| |||||||||||||||||||    
T  5881841 catctagtaatgcttgcaacatcttagacttacatgtactattttattgttgacatctttaacatgcaaaca 5881770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 4167234 - 4167152
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    |||| |||||||||||||||| ||||||||||||  || ||||||||||||| |||||||||||| |||||| ||||||||||    
T  4167234 catccagtaatgcttgcaacatcttggacttacaaatattattttatcgttgacatctttaacatacaaacatagttgatgat 4167152  T

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Target: chr2; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 205 - 284
Target Start/End: Original strand, 19500806 - 19500885
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgat 284  Q
    ||||||||||||||||||||| |||| | ||||| ||||||||||||||||  ||||||||||||| ||| |||||||||    
T  19500806 catctagtaatgcttgcaacatcttgaaattacatgtactattttatcgttaacatctttaacatgtaaatagagttgat 19500885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 37906022 - 37905940
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    |||| |||||| ||||||||| |||||||||||| ||  ||||||||| |||| ||||||||||||||||||||||| |||||    
T  37906022 catccagtaattcttgcaacatcttggacttacatgtgttattttatcattggaatctttaacatgcaaacagagttaatgat 37905940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 43648136 - 43648218
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    |||||||||||| |||| ||| |||||||||||| || ||||||||||||||  |||||||||||| ||||| ||||||||||    
T  43648136 catctagtaatgtttgcgacatcttggacttacaagtgctattttatcgttgaaatctttaacatggaaacaaagttgatgat 43648218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 213 - 287
Target Start/End: Complemental strand, 44286253 - 44286179
Alignment:
Q  213 aatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||| ||| ||||||||| ||||||||||||||| |||| ||||||||||||||| ||||| ||||    
T  44286253 aatgcttgcaacatcttagacttacagatactattttatcgttagcatatttaacatgcaaacaaagttgttgat 44286179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 35959204 - 35959126
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| ||||||| |    |||||||||||||||||  |||||||||||||||||| ||||||||||    
T  35959204 catctagtaatgcttgcaacatcttggacat----gtactattttatcgttgaaatctttaacatgcaaacatagttgatgat 35959126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 227 - 287
Target Start/End: Original strand, 17071650 - 17071710
Alignment:
Q  227 cttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    |||||| |||||||||||||||||||||||| |||||||||||||||||| | ||||||||    
T  17071650 cttggatttacaggtactattttatcgttggaatctttaacatgcaaacaaatttgatgat 17071710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 227 - 287
Target Start/End: Original strand, 29242051 - 29242111
Alignment:
Q  227 cttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| |||||||| |||||||||||| ||| |||||||||||||    
T  29242051 cttggacttacaggtactattgtatcgttgacatctttaacatacaaccagagttgatgat 29242111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 19314159 - 19314074
Alignment:
Q  205 catctagtaatgcttgcaacaccttggactta---caggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| ||| ||||||   || |||||||||||||| || ||||||||||||||||||| ||||| ||||    
T  19314159 catctagtaatgcttgcaacatcttagacttataacatgtactattttatcgctgacatctttaacatgcaaacatagttgctgat 19314074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 205 - 275
Target Start/End: Original strand, 41051191 - 41051260
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaac 275  Q
    ||||||| ||||||| ||||| |||| ||||||||||||||||||||| ||||||| ||||||||||||||    
T  41051191 catctagcaatgcttacaacatcttgaacttacaggtactattttatccttggcat-tttaacatgcaaac 41051260  T

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Target: chr2; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 227 - 287
Target Start/End: Original strand, 17054009 - 17054069
Alignment:
Q  227 cttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    |||||| |||||||||||||||||||||||| | |||||||||||||||| | ||||||||    
T  17054009 cttggatttacaggtactattttatcgttggaacctttaacatgcaaacaaatttgatgat 17054069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 31862164 - 31862082
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||  | ||| | |||||||||||| |||||||||||| || || ||| |||||||||||||||| ||||||||    
T  31862164 catctagtaatgtctacaatatcttggacttacaagtactattttattgtcggaatccttaacatgcaaacagacttgatgat 31862082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 231 - 287
Target Start/End: Original strand, 18258204 - 18258260
Alignment:
Q  231 gacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||| ||| ||||||||||||||||| |||||||||||||||| ||||||| ||||    
T  18258204 gacttgcagttactattttatcgttgggatctttaacatgcaaagagagttgctgat 18258260  T

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Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 243 - 287
Target Start/End: Original strand, 41463779 - 41463823
Alignment:
Q  243 ctattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||    
T  41463779 ctattttatcgttgacatctttaacatgcaaacagagttgttgat 41463823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 246
Target Start/End: Original strand, 19424533 - 19424574
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactat 246  Q
    ||||||||||||||||||||| ||| ||||| ||||||||||    
T  19424533 catctagtaatgcttgcaacatcttagacttgcaggtactat 19424574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 71; Significance: 4e-32; HSPs: 54)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 3535231 - 3535149
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  3535231 catctagtaatgcttgcaacatcttggacttaaaggtactattttatcgttggcatctttaacatgcaaacagagttgctgat 3535149  T

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Target: chr1; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 8222436 - 8222354
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||    
T  8222436 catctagtaatgcttgcaacatcttggacttacatgtactattttatcgttggaatctttaacatgcaaacagagttgatgat 8222354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 14758340 - 14758258
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||    
T  14758340 catctagtaatgcttgcaacatcttggacttacatgtactattttatcgttggcatctttaacatgcaaacatagttgatgat 14758258  T

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Target: chr1; HSP #4
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 16415954 - 16415872
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    |||||| |||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  16415954 catctaataatgcttgcaacatcttggacttacatgtactattttatcgttggcatctttaacatgcaaacagagttgatgat 16415872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 2960056 - 2959974
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| | ||||||||    
T  2960056 catctagtaatgcttgcaacatcttggacttacagatactattttatcgttggcatctttaacatgcaaacatatttgatgat 2959974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 23999655 - 23999573
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||||||    
T  23999655 catctagtaatgcttgcaacatcttggacttacaggtactattttatcgttgaaatctttaacatgcaaatagagttgatgat 23999573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 27227353 - 27227435
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||||||||| ||||||||||||||||||| ||||||||||    
T  27227353 catctagtaatgcttgcaacatcttggacttacagatactattttatcgttgacatctttaacatgcaaacatagttgatgat 27227435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 27267068 - 27267150
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| ||| ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  27267068 catctagtaatgcttgcaacatcttagacttacagatactattttatcgttgacatctttaacatgcaaacagagttgatgat 27267150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 37451593 - 37451511
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    |||||||||||| |||||||| ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  37451593 catctagtaatgtttgcaacatcttggacttacagatactattttatcgttggaatctttaacatgcaaacagagttgatgat 37451511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 37618769 - 37618851
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| |||||||||||| ||| |||||||||||||| |||||||||||||||||||||||||||||    
T  37618769 catctagtaatgcttgcaacatcttggacttacatgtattattttatcgttggaatctttaacatgcaaacagagttgatgat 37618851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 46931717 - 46931635
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||||||    
T  46931717 catctagtaatgcttgcaacatcttggacttacaggtactattttatcgttgaaatctttaacatgcaaatagagttgatgat 46931635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 51129167 - 51129085
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||||||||  |||||||||||||||||||||||||||||    
T  51129167 catctagtaatgcttgcaacatcttggacttacatgtactattttatcgttgaaatctttaacatgcaaacagagttgatgat 51129085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 205 - 285
Target Start/End: Complemental strand, 30254731 - 30254651
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatg 285  Q
    ||||||||||||||||||||| |||||||||||| ||| |||||||||||||| |||||||||||||||||||||||||||    
T  30254731 catctagtaatgcttgcaacatcttggacttacatgtattattttatcgttggaatctttaacatgcaaacagagttgatg 30254651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 238381 - 238463
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| ||||||||||||| || |||||||||||||||||||||||||| |||||| ||||||||||    
T  238381 catctagtaatgcttgcaacatcttggacttacagatattattttatcgttggcatctttaacatacaaacatagttgatgat 238463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 3309461 - 3309379
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||| | ||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| ||||    
T  3309461 catctagtaatgcttgcaatatcttggacttacgggtactattttatcgttggcatctttaacatacaaacagagttgctgat 3309379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 15383241 - 15383159
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| |||||| |||||||||||||||||||||||| |||||||||||||| ||| ||||||||||    
T  15383241 catctagtaatgcttgcaacatcttggatttacaggtactattttatcgttggaatctttaacatgcatacatagttgatgat 15383159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 19899637 - 19899719
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||||||||| |||||||||||||||| ||||||| ||||    
T  19899637 catctagtaatgcttgcaacatcttggacttacatgtactattttatcgttggaatctttaacatgcaaatagagttggtgat 19899719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 209 - 287
Target Start/End: Complemental strand, 25160936 - 25160858
Alignment:
Q  209 tagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||||| |||||||||||||||||| ||||||||||    
T  25160936 tagtaatgcttgcaacatcttggacttacatgtactattttatcgttggaatctttaacatgcaaacaaagttgatgat 25160858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 27532849 - 27532931
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||| |||||||||| ||| ||||    
T  27532849 catctagtaatgcttgcaacatcttggacttacatgtactattttatcgttggcatctttaacttgcaaacagaattgctgat 27532931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 209 - 287
Target Start/End: Original strand, 47682366 - 47682444
Alignment:
Q  209 tagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  47682366 tagtaatgcttgcaacatcttggatttacaggtactattttatcgttgacatctttaacatgcaaacatagttgatgat 47682444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 48353850 - 48353768
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||| | ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||||    
T  48353850 catctagtaatgcttgcaatatcttggacttacagatactattttatcgttgacatctttaacatgcaaacagagttgctgat 48353768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 205 - 286
Target Start/End: Original strand, 27563773 - 27563854
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatga 286  Q
    ||||||||||| ||||||||| ||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||    
T  27563773 catctagtaatacttgcaacatcttggacttacatatactattttatcgtttgcatctttaacatgcaaacagagttgatga 27563854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 1359803 - 1359885
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    |||| ||||||||||||||||  ||| |||||||||||||||||||||||||| |||||||||||||||||| ||||||||||    
T  1359803 catccagtaatgcttgcaacattttgaacttacaggtactattttatcgttggaatctttaacatgcaaacatagttgatgat 1359885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 4330589 - 4330507
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    |||||||||||||||||||||  ||||||||||| ||||||||||||| ||| ||||||||||||||||| ||||||||||||    
T  4330589 catctagtaatgcttgcaacatattggacttacaagtactattttatctttgacatctttaacatgcaaaaagagttgatgat 4330507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 11742236 - 11742318
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||||||| |||| ||||||| ||||    
T  11742236 catctagtaatgcttgcaacatcttggacttacatgtactattttatcgttgacatctttaacatacaaagagagttgctgat 11742318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 15168404 - 15168322
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    |||||| |||||||||||||| |||| ||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  15168404 catctaataatgcttgcaacatcttgtacttacatgtactattttatcgttgacatctttaacatgcaaacatagttgatgat 15168322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 206 - 284
Target Start/End: Original strand, 27763180 - 27763258
Alignment:
Q  206 atctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgat 284  Q
    |||||||||||||||||||| |||| |||||||| ||||||||||||||||| |||||||||||||||| |||||||||    
T  27763180 atctagtaatgcttgcaacatcttgaacttacagatactattttatcgttggaatctttaacatgcaaatagagttgat 27763258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 28564651 - 28564733
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    |||||||||||| |||||||| |||||||||||| ||| |||||||||||||  |||||||||||||||||||||||||||||    
T  28564651 catctagtaatgtttgcaacatcttggacttacatgtattattttatcgttgaaatctttaacatgcaaacagagttgatgat 28564733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 28769961 - 28769879
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||| |||| |||||||| ||||||||||||||||||||||||||||||  ||||||||||||||||||||| |||||||    
T  28769961 catctagcaatgtttgcaacatcttggacttacaggtactattttatcgttgaaatctttaacatgcaaacagaggtgatgat 28769879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 30326820 - 30326902
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| |||||||||| | ||| |||||||||||||| |||||||||||||||||| ||||||||||    
T  30326820 catctagtaatgcttgcaacatcttggacttaaatgtattattttatcgttggaatctttaacatgcaaacatagttgatgat 30326902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 32267342 - 32267260
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||||| ||||| || ||||||||||||||| ||||||||||    
T  32267342 catctagtaatgcttgcaacatcttggacctacaggtactattttatagttggaatatttaacatgcaaacaaagttgatgat 32267260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 209 - 287
Target Start/End: Original strand, 34012254 - 34012332
Alignment:
Q  209 tagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||| |||| |||||||  |||||||||||||||||||||||||||||||||||||| ||||||||    
T  34012254 tagtaatgcttgcaacatcttgaacttacatatactattttatcgttggcatctttaacatgcaaacagatttgatgat 34012332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 38823522 - 38823440
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    |||||||||||||||||||||  || |||||||||||| ||||||||||||||||||| ||||||||||||||||||| ||||    
T  38823522 catctagtaatgcttgcaacattttagacttacaggtattattttatcgttggcatctctaacatgcaaacagagttgctgat 38823440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 40885121 - 40885039
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    |||||||||||| |||||||| |||||||||||| ||||||||||||| | ||||||||||||||||||||| ||||||||||    
T  40885121 catctagtaatgtttgcaacatcttggacttacatgtactattttatcatcggcatctttaacatgcaaacatagttgatgat 40885039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 41926464 - 41926383
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    |||||||||||||||| || | |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  41926464 catctagtaatgcttg-aatatcttggacttacaagtactattttattgttggcatctttaacatgcaaacagagttgatgat 41926383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 7078931 - 7079013
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    |||||||||||| |||||| | ||| ||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||    
T  7078931 catctagtaatgtttgcaatatcttagacttacatatactattttatcgttggcatctttaacatgcaaacagagttgttgat 7079013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 9902922 - 9903004
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||| |||||||| || ||||||||||| |||||||||||||||||| ||||||||||||||||||| | ||||||||    
T  9902922 catctagtagtgcttgcagcatcttggacttactggtactattttatcgttgtcatctttaacatgcaaacaaatttgatgat 9903004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 10923035 - 10922953
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    |||||||||||||||||||||  |||||||||||| ||||||||||| ||  | |||||||||||||||||||||||||||||    
T  10923035 catctagtaatgcttgcaacattttggacttacagatactattttattgtcagaatctttaacatgcaaacagagttgatgat 10922953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 32216363 - 32216281
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    |||||| |||||||||||||| ||||||||||||  || |||||||||||||| ||||||||||||||||||||||| |||||    
T  32216363 catctaataatgcttgcaacatcttggacttacaaatattattttatcgttggaatctttaacatgcaaacagagtttatgat 32216281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 47279497 - 47279415
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    |||||| ||||| |||||||| ||||||||||||| ||||||||||| |||||||||||||||||||||||| ||||| ||||    
T  47279497 catctaataatgtttgcaacatcttggacttacagatactattttattgttggcatctttaacatgcaaacatagttgttgat 47279415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 205 - 282
Target Start/End: Complemental strand, 39393692 - 39393615
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttg 282  Q
    |||||||||||| |||||||| |||||| |||| |||||||||||||| ||||||||||||||||| |||||||||||    
T  39393692 catctagtaatgtttgcaacatcttggatttaccggtactattttatcattggcatctttaacatggaaacagagttg 39393615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 205 - 268
Target Start/End: Complemental strand, 1547579 - 1547516
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaaca 268  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||||||||| ||||||||||    
T  1547579 catctagtaatgcttgcaacatcttggacttacatgtactattttatcgttggtatctttaaca 1547516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 205 - 284
Target Start/End: Complemental strand, 21289908 - 21289829
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgat 284  Q
    |||||||||||| |||||||| |||||||||| | ||  ||||||||||||||||||||||| |||||||||||||||||    
T  21289908 catctagtaatgtttgcaacatcttggacttataagtgttattttatcgttggcatctttaatatgcaaacagagttgat 21289829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 18422959 - 18422877
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||| ||||||||||||| |||||||||||| || || |||||||||||| ||||||||||||||||| ||| |||||||    
T  18422959 catctagcaatgcttgcaacatcttggacttacatgtgcttttttatcgttggaatctttaacatgcaaacggaggtgatgat 18422877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 209 - 287
Target Start/End: Original strand, 33725472 - 33725550
Alignment:
Q  209 tagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    |||||||| ||||||||  |||| |||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  33725472 tagtaatgtttgcaacattttggtcttacatgtactattttatcgttgacatctttaacatgcaaacatagttgatgat 33725550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 10181875 - 10181958
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttaca-ggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    |||||||||||||||||||||  ||||||||||| ||||||||| ||| |||| |||||||||||| ||| |||||||||||||    
T  10181875 catctagtaatgcttgcaacattttggacttacaaggtactattgtattgttgtcatctttaacatacaaccagagttgatgat 10181958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 206 - 287
Target Start/End: Complemental strand, 22171018 - 22170937
Alignment:
Q  206 atctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||| ||||| |||||||| ||| |||||||| | | ||||||||||||| ||||||||||||||||||||| ||||||||    
T  22171018 atctaataatgtttgcaacatcttagacttacaagaattattttatcgttgacatctttaacatgcaaacagatttgatgat 22170937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 206 - 287
Target Start/End: Complemental strand, 42721343 - 42721265
Alignment:
Q  206 atctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||  |||||||| |||||||||||| ||| |||||||||||||   ||||||||||||||||| ||||||||||    
T  42721343 atctagtaataattgcaacatcttggacttacatgtaatattttatcgttg---tctttaacatgcaaacaaagttgatgat 42721265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 205 - 267
Target Start/End: Original strand, 31621417 - 31621479
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaac 267  Q
    |||||| ||||||||||||||  ||| ||||||| ||||||||||||||||||||||||||||    
T  31621417 catctactaatgcttgcaacatattgaacttacatgtactattttatcgttggcatctttaac 31621479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 206 - 287
Target Start/End: Complemental strand, 38759840 - 38759759
Alignment:
Q  206 atctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    |||||||||||||||||||| |||||| |||||  || |||||||| |||| || |||||||||||||||| ||||| ||||    
T  38759840 atctagtaatgcttgcaacatcttggagttacatatattattttatagttgacacctttaacatgcaaacatagttggtgat 38759759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 235 - 287
Target Start/End: Complemental strand, 48620906 - 48620854
Alignment:
Q  235 tacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||  |||||||||||||||||||||||||||||||| ||||    
T  48620906 tacaggtactatttattcgttggcatctttaacatgcaaacagagttgctgat 48620854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 15752337 - 15752255
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||   |||||||  |||||||||||| ||| |||||| ||||||| || |||||||||||||||||||| |||||    
T  15752337 catctagtaaaaattgcaacttcttggacttacatgtattattttgtcgttggaatttttaacatgcaaacagagttaatgat 15752255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 205 - 276
Target Start/End: Complemental strand, 31962924 - 31962853
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaaca 276  Q
    |||||| |||||||||||||| |||  |||||||  || |||||||||||||   |||||||||||||||||    
T  31962924 catctaataatgcttgcaacatcttaaacttacatatattattttatcgttgatttctttaacatgcaaaca 31962853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 124
Target Start/End: Original strand, 33725360 - 33725396
Alignment:
Q  88 tttaaagggagcttctacgctgcagtcaggaaactga 124  Q
    |||||||||||||| |||| |||||||||||||||||    
T  33725360 tttaaagggagcttatacgttgcagtcaggaaactga 33725396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 69; Significance: 6e-31; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 205 - 285
Target Start/End: Complemental strand, 4205296 - 4205216
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatg 285  Q
    |||||||| |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  4205296 catctagtgatgcttgcaacatcttggacttacatgtactattttatcgttggcatctttaacatgcaaacagagttgatg 4205216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 7703821 - 7703739
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||    
T  7703821 catctagtaatgcttgcaacatcttcgacttacaggtactattttatcgttggcatctttaacgtgcaaacagagttgctgat 7703739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 17173602 - 17173520
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    |||||||| |||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  17173602 catctagtgatgcttgcaacatcttagacttacatgtactattttatcgttggcatctttaacatgcaaacagagttgatgat 17173520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 19440547 - 19440629
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||||| |||| |||||||||||||||||||||||||||||    
T  19440547 catctagtaatgcttgcaacatcttggacttacatgtactattttatcattggaatctttaacatgcaaacagagttgatgat 19440629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 34361391 - 34361473
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| |||||||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  34361391 catctagtaatgcttgcaacatcttggacttataggtactattttatcgttggaatctttaacatgcaaatagagttgatgat 34361473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 34947994 - 34948076
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  34947994 catctagtaatgcttgcaacatcttggacttacatgtattattttatcgttggcatctttaacatgcaaacagagttgttgat 34948076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 55477790 - 55477872
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| |||||||||| | |||||||||||||||||| |||||||||||||||||||||||||||||    
T  55477790 catctagtaatgcttgcaacatcttggacttaaatgtactattttatcgttggaatctttaacatgcaaacagagttgatgat 55477872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 205 - 289
Target Start/End: Original strand, 7152103 - 7152187
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgatgt 289  Q
    |||||| |||||||||||| | |||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  7152103 catctaataatgcttgcaaaatcttggacttacaggtactattttatcgttgacatatttaacatgcaaacagagttgatgatgt 7152187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 206 - 282
Target Start/End: Original strand, 55241005 - 55241081
Alignment:
Q  206 atctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttg 282  Q
    ||||||||||| |||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  55241005 atctagtaatgtttgcaacatcttggacttacatgtactattttatcgttggcatctttaacatgcaaacagagttg 55241081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 1815613 - 1815531
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    |||||||||||| |||||||| |||||| |||||||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  1815613 catctagtaatgtttgcaacatcttggatttacaggtactattttatcgttggaatctttaacatgcaaatagagttgatgat 1815531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 17168025 - 17167943
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    |||||||| |||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  17168025 catctagtgatgcttgcaacatcttagacttacatgtactattttatcgttggcatctttaacatgcaaatagagttgatgat 17167943  T

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Target: chr4; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 32912479 - 32912561
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||| |||| ||||||||||||    
T  32912479 catctagtaatgcttgcaacatcttggacttacaggtactattttatcgttgaaatctttaacatacaaatagagttgatgat 32912561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 33341710 - 33341628
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||| ||||| |||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  33341710 catctagtaatgcttacaacatcttggacttacatgtactattttatcgttgacatctttaacatgcaaacagagttgctgat 33341628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 35020934 - 35021016
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    |||||||||||| |||||| | ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  35020934 catctagtaatgtttgcaatatcttggacttacagatactattttatcgttggaatctttaacatgcaaacagagttgatgat 35021016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 36493588 - 36493670
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    |||| |||||||||||||| | ||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  36493588 catcgagtaatgcttgcaatatcttagacttacagatactattttatcgttggcatctttaacatgcaaacagagttgatgat 36493670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 37663640 - 37663722
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||| ||||  |||||||||    
T  37663640 catctagtaatgcttgcaacatcttggacttacaggtactattttatcgttggaatctttaacatgcgaacaacgttgatgat 37663722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 39400320 - 39400238
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| |||| ||||| |||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  39400320 catctagtaatgcttgcaacatcttgaacttaaaggtaccattttatcgttggcatctttaacatgcaaacagagttgctgat 39400238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 46888057 - 46888139
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    |||||||||||||||| |||| |||||| |||||||||||||||||||||||||||||||||||||||||| || ||||||||    
T  46888057 catctagtaatgcttgtaacatcttggatttacaggtactattttatcgttggcatctttaacatgcaaaccgatttgatgat 46888139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 50697554 - 50697471
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaaca-tgcaaacagagttgatgat 287  Q
    ||||||||||||||| ||||| |||||| |||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  50697554 catctagtaatgcttacaacatcttggaattacaggtactattttatcgttggaatctttaacattgcaaacagagttgatgat 50697471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 879447 - 879529
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| ||  | |||||||||||||||||| ||||||||||    
T  879447 catctagtaatgcttgcaacatcttggacttacaggtactattttattgtcagaatctttaacatgcaaacaaagttgatgat 879529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 207 - 281
Target Start/End: Complemental strand, 9139539 - 9139465
Alignment:
Q  207 tctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagtt 281  Q
    ||||||||||||||||||| |||||||||||| ||||||  ||||||||||||||||||||||||||||||||||    
T  9139539 tctagtaatgcttgcaacatcttggacttacatgtactacgttatcgttggcatctttaacatgcaaacagagtt 9139465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 19089352 - 19089434
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||| ||||  |||||||||    
T  19089352 catctagtaatgcttgcaacatcttggacttacaggtactattttatcgttgaaatctttaacatgcgaacaacgttgatgat 19089434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 23761383 - 23761301
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| |||||||||| |||||| ||||||||||||| ||||||||| |||||||||||||| ||||    
T  23761383 catctagtaatgcttgcaacatcttggacttataggtacaattttatcgttggtatctttaacgtgcaaacagagttgctgat 23761301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 28002885 - 28002967
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    |||||||||||| | |||||| |||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  28002885 catctagtaatgttagcaacatcttggacttacatgtactattttatcgttgacatctttaacatgcaaacatagttgatgat 28002967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 30002540 - 30002622
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| ||| |||||| | ||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  30002540 catctagtaatgcttgcaacatcttagacttaaatgtactattttatcgttgacatctttaacatgcaaacagagttgctgat 30002622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 32579758 - 32579676
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    |||||||||||| |||||||| |||||||||||| ||||||||||||||||| ||| ||||||||||||||| ||||||||||    
T  32579758 catctagtaatgtttgcaacatcttggacttacatgtactattttatcgttgacatttttaacatgcaaacatagttgatgat 32579676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 33816415 - 33816497
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    |||||||||||| |||||||| |||||||||||| | ||||||||||||||| ||||||||||||||||||| ||||||||||    
T  33816415 catctagtaatgtttgcaacatcttggacttacatgaactattttatcgttgacatctttaacatgcaaacatagttgatgat 33816497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 37288040 - 37287958
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    |||||| |||||||||||||| |||||||||||| |||||||||||||||||||||||| |||||||||||| ||||| ||||    
T  37288040 catctaataatgcttgcaacatcttggacttacatgtactattttatcgttggcatcttcaacatgcaaacaaagttgctgat 37287958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 37775970 - 37775888
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| ||| |||||||| |||||||||||||||||| |||||||||||||||||| ||||| ||||    
T  37775970 catctagtaatgcttgcaacatcttagacttacatgtactattttatcgttggtatctttaacatgcaaacaaagttgctgat 37775888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 47254052 - 47253970
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| ||| ||||| || |||||||||||| |||||||||||||||||||||||||||||| ||||    
T  47254052 catctagtaatgcttgcaacatcttagacttgcatgtactattttattgttggcatctttaacatgcaaacagagttgctgat 47253970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 205 - 284
Target Start/End: Complemental strand, 25184425 - 25184346
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgat 284  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||| || || || |||||||||||||||||||||||    
T  25184425 catctagtaatgcttgcaacatcttggacttacatgtactattttattgtcggaatttttaacatgcaaacagagttgat 25184346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 42200042 - 42199959
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttaca-ggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| |||||||||||| |||| |||||||||||||| |||||||||||||||| |||||| |||||    
T  42200042 catctagtaatgcttgcaacatcttggacttacaaggtattattttatcgttggaatctttaacatgcaaatagagtttatgat 42199959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 3042931 - 3042849
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    |||||||||||||||||||||  ||||||||||| |||||||||||||||||  |||||||||| ||||||| ||||||||||    
T  3042931 catctagtaatgcttgcaacatgttggacttacatgtactattttatcgttgaaatctttaacaagcaaacaaagttgatgat 3042849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 50765032 - 50764950
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| ||| |||||||| ||||||||||||||||| |||||||||| |||||||| ||||| ||||    
T  50765032 catctagtaatgcttgcaacatcttagacttacatgtactattttatcgttgacatctttaacttgcaaacatagttgctgat 50764950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 206 - 287
Target Start/End: Original strand, 5047866 - 5047947
Alignment:
Q  206 atctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    |||||||||  ||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||| |||| |||||    
T  5047866 atctagtaaaacttgcaacatcttggacttacatgtactattttattgttggcatctttaacatgcaaacatagtttatgat 5047947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 6864347 - 6864265
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| |||| |||||||  || |||||||||||||  |||||||||||||||||| ||||||||||    
T  6864347 catctagtaatgcttgcaacatcttgaacttacaaatattattttatcgttgtaatctttaacatgcaaacaaagttgatgat 6864265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 17272276 - 17272194
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||| ||||  |||||||| ||||||| ||||||| ||||    
T  17272276 catctagtaatgcttgcaacatcttggacttacatgtactattttattgttgaaatctttaatatgcaaatagagttgctgat 17272194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 27396928 - 27396846
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    |||||||||||||||||||||  ||||||||| |||||| | |||||||||| |||||||||||||||||||| |||| ||||    
T  27396928 catctagtaatgcttgcaacattttggacttataggtaccactttatcgttgacatctttaacatgcaaacagcgttgctgat 27396846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 29584099 - 29584181
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| |||||||||||| |||| ||||||| ||||  |||||||||||||||| ||||||| ||||    
T  29584099 catctagtaatgcttgcaacatcttggacttacatgtaccattttattgttgaaatctttaacatgcaaatagagttgctgat 29584181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 38012166 - 38012084
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    |||||||||||  |||||||| |||||||||||| |||||||||||| |||||||| |||||| |||||||| ||||||||||    
T  38012166 catctagtaatatttgcaacatcttggacttacatgtactattttattgttggcatttttaacgtgcaaacatagttgatgat 38012084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 209 - 287
Target Start/End: Complemental strand, 49376275 - 49376197
Alignment:
Q  209 tagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||| ||||  |||||||||||| ||||||||||||||||| |||||||||||| |||||| ||||||||||    
T  49376275 tagtaatgctttcaacttcttggacttacatgtactattttatcgttgacatctttaacatccaaacaaagttgatgat 49376197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 206 - 287
Target Start/End: Complemental strand, 4598293 - 4598212
Alignment:
Q  206 atctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||| |||||||||||||| |||||| ||| | ||| ||||||||||||||||||||||||||| ||||||||||| ||||    
T  4598293 atctaataatgcttgcaacatcttggatttaaatgtattattttatcgttggcatctttaacatgaaaacagagttgctgat 4598212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 209 - 282
Target Start/End: Complemental strand, 32592392 - 32592319
Alignment:
Q  209 tagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttg 282  Q
    ||||||||||| ||||| |||| ||||||||||||||||||||||| | ||||||||||||||||||| |||||    
T  32592392 tagtaatgctttcaacatcttgaacttacaggtactattttatcgtagacatctttaacatgcaaacaaagttg 32592319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 213 - 276
Target Start/End: Complemental strand, 56050234 - 56050171
Alignment:
Q  213 aatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaaca 276  Q
    ||||||||||||| ||||||||||||||||||||||||||||||   |||||||||||||||||    
T  56050234 aatgcttgcaacatcttggacttacaggtactattttatcgttgaagtctttaacatgcaaaca 56050171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 240 - 287
Target Start/End: Original strand, 35025530 - 35025577
Alignment:
Q  240 gtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||    
T  35025530 gtactattttatcgttggcatctttaacatgcaaacatagttgatgat 35025577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 205 - 255
Target Start/End: Original strand, 35025465 - 35025515
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgtt 255  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  35025465 catctagtaatgcttgcaacatcttggacttacatgtactattttatcgtt 35025515  T

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Target: chr4; HSP #47
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 238 - 287
Target Start/End: Original strand, 4934134 - 4934183
Alignment:
Q  238 aggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  4934134 aggtactattttatcgttgtcatctttaacatgcaaacatagttgatgat 4934183  T

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Target: chr4; HSP #48
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 213 - 289
Target Start/End: Original strand, 25700963 - 25701039
Alignment:
Q  213 aatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgatgt 289  Q
    ||||||||||| | ||| || |||| | |||||||||||||||| | ||||||||||||||||| ||||||||||||    
T  25700963 aatgcttgcaaaatcttagatttacggatactattttatcgttgacttctttaacatgcaaacaaagttgatgatgt 25701039  T

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Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 205 - 246
Target Start/End: Complemental strand, 23431867 - 23431826
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactat 246  Q
    |||||| |||||||||||||| ||||||||||||||||||||    
T  23431867 catctactaatgcttgcaacatcttggacttacaggtactat 23431826  T

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Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 205 - 276
Target Start/End: Original strand, 46884013 - 46884080
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaaca 276  Q
    ||||||||||||||||||||| |  |||||||||  |||||||||||| |||| || |||||||||||||||    
T  46884013 catctagtaatgcttgcaacatc--ggacttaca--tactattttatctttggaatttttaacatgcaaaca 46884080  T

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Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 284
Target Start/End: Complemental strand, 26896399 - 26896320
Alignment:
Q  205 catctagtaatgcttgcaacacctt-ggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgat 284  Q
    |||||||||||| ||||||||  || ||||||||| |||||||||||||||||  || ||||||||||||| ||| |||||    
T  26896399 catctagtaatgtttgcaacattttcggacttacaagtactattttatcgttgaaat-tttaacatgcaaatagacttgat 26896320  T

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Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 90 - 125
Target Start/End: Original strand, 34361273 - 34361308
Alignment:
Q  90 taaagggagcttctacgctgcagtcaggaaactgac 125  Q
    ||||||||||||||||| ||||||||||||||||||    
T  34361273 taaagggagcttctacggtgcagtcaggaaactgac 34361308  T

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Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 125
Target Start/End: Original strand, 33816300 - 33816333
Alignment:
Q  92 aagggagcttctacgctgcagtcaggaaactgac 125  Q
    ||||||||||||||| ||||||||||||||||||    
T  33816300 aagggagcttctacgatgcagtcaggaaactgac 33816333  T

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Target: scaffold0318 (Bit Score: 67; Significance: 9e-30; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 12221 - 12139
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  12221 catctagtaatgcttgcaacatcttagacttacatgtactattttatcgttggcatctttaacatgcaaacagagttgctgat 12139  T

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Target: scaffold0291 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 8199 - 8117
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||||||||| ||||||||||||| ||||  |||||||||    
T  8199 catctagtaatgcttgcaacatcttggacttacatgtactattttatcgttggaatctttaacatgcgaacaacgttgatgat 8117  T

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Target: scaffold0022 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 209 - 287
Target Start/End: Original strand, 145893 - 145971
Alignment:
Q  209 tagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||||||||| |||||||||||||  |||||||||||||||| |||||||||||||||| ||||||||||||    
T  145893 tagtaatgcttgcaacatcttggacttacagacactattttatcgttggaatctttaacatgcaaatagagttgatgat 145971  T

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Target: scaffold0008 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 267597 - 267515
Alignment:
Q  205 catctagtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    ||||||||||| |||||| || |||||||||||| ||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  267597 catctagtaattcttgcagcatcttggacttacatgtattattttatcgttggcatctttaacatgcaaacaaagttgatgat 267515  T

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Target: scaffold0061 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 210 - 287
Target Start/End: Complemental strand, 44263 - 44186
Alignment:
Q  210 agtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    |||||||||||||||| |||||||||||| |||||||||||||||||  |||||||||||||||||| ||||||||||    
T  44263 agtaatgcttgcaacaacttggacttacatgtactattttatcgttgaaatctttaacatgcaaacaaagttgatgat 44186  T

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Target: scaffold0017 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 210 - 287
Target Start/End: Original strand, 154524 - 154601
Alignment:
Q  210 agtaatgcttgcaacaccttggacttacaggtactattttatcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    |||||||||||||||| |||||||||||| |||||||||||||||||  |||||||||||||||||| ||||||||||    
T  154524 agtaatgcttgcaacaacttggacttacatgtactattttatcgttgaaatctttaacatgcaaacaaagttgatgat 154601  T

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Target: scaffold0009 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 250 - 287
Target Start/End: Complemental strand, 100994 - 100957
Alignment:
Q  250 atcgttggcatctttaacatgcaaacagagttgatgat 287  Q
    |||||||| |||||||||||||||||||||||||||||    
T  100994 atcgttggaatctttaacatgcaaacagagttgatgat 100957  T

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