View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF20705_low_1 (Length: 885)
Name: NF20705_low_1
Description: NF20705
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20705_low_1 |
 | |
|
| [»] scaffold0400 (2 HSPs) |
| | |
|
| [»] scaffold0365 (2 HSPs) |
| | |
|
Alignment Details
Target: chr1 (Bit Score: 776; Significance: 0; HSPs: 17)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 776; E-Value: 0
Query Start/End: Original strand, 21 - 872
Target Start/End: Complemental strand, 15040891 - 15040040
Alignment:
| Q |
21 |
tttggaattggacccttcaattggttgtatgatatatcaacagttgtcaagcctgacatctcaccataggtcaagggaatggtacaagaaagattcaatg |
120 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
15040891 |
tttggaattggacccttcaattggttgcatgatatatcaacagttgtcaagcctgacatctcaccataggtcaagggaatggtacaaaaaagattcaatg |
15040792 |
T |
|
| Q |
121 |
tttctaagcgatttaactgtccaagcattgttggtatggttccattcaaagaattcccactaagattaagattctcaataacttttaactgtccaatctc |
220 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| |
|
|
| T |
15040791 |
tttctaagcgatttaactgtccaagcattgttggtatggttccattcaaagaattcccactaagatcaagattttcaataacttttaactgtccaatctc |
15040692 |
T |
|
| Q |
221 |
atcaggaatgtttccttcaaacttattttggctcatatttaagtgtaataacatagataatcttccaagttgttttgggacgaagccacttaaattattt |
320 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15040691 |
atcaggaatgtttccttcaaacttattttggctcatatttaagtgtaataacatagataatcttccaagttgttttgggacgaagccacttaaattattt |
15040592 |
T |
|
| Q |
321 |
gttgccagctcaaagatagcaacctccttcaatgaggcaatttgtacaggaacttcccctgaaaagtaattgctacttatcgagagttgtttgatcaatg |
420 |
Q |
| |
|
||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
15040591 |
gttgccagctccaagatagcaacttccttcaatgaggcaatttgtacaggaacttcccctgaaaagtaattgctacttatcgagagttgttggatcaatg |
15040492 |
T |
|
| Q |
421 |
aagataagttgcctagctcctttggaatttcgcctgttagttgattcgaggacaaatcaagtaaatgtaaattggttgccccaaccaattctagtggtat |
520 |
Q |
| |
|
|||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15040491 |
aagataagttgcctagctccattggaatttctcctgttagttgattcgaggacaaatcaagtaaatgtaaattggttgccccaaccaattctagtggtat |
15040392 |
T |
|
| Q |
521 |
actccctgttaaattattgttggagattttaaggcttatgagattcttgtgtcttccccaattaggtgaaatatggccaaaaattttattaccactcaat |
620 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
15040391 |
actccctgttaaattattgttggagattttaaggcttatgagattcttgcgttttccccaattaggtgaaatatggccaaaatatttattaccactcaat |
15040292 |
T |
|
| Q |
621 |
tccatgcagtacaagtttggacacacaccaaagctatctgttatatttccagcaagttggttttgttcaattctcactctctttagacttgaacaattct |
720 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
15040291 |
tccatgtagtacaagtttggacacacaccaaagctatctgttatatttccagcaagttggttttgttcaagtctcactctctttagacttgaacaattct |
15040192 |
T |
|
| Q |
721 |
tcaaactctttggaattggacctgtgaactgattatttctagccgagaacacagttaactttccactattacatatattgtgaggtaaatgacctatgaa |
820 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |
|
|
| T |
15040191 |
tcaaactctttggaattggacctgtgaactgagtatttctagccgagaacacagttaactttccactactacatatattgggaggtaaatgacctatgaa |
15040092 |
T |
|
| Q |
821 |
attattatcacctaactgcagaatcttcaatttgttaagcctattcatttct |
872 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15040091 |
attattatcaccaaactgcagaatcttcaatttgttaagcctattcatttct |
15040040 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 200; E-Value: 1e-108
Query Start/End: Original strand, 111 - 748
Target Start/End: Original strand, 14522694 - 14523328
Alignment:
| Q |
111 |
agattcaatgtttctaagcgatttaactgtccaagcattgttggtatggttccattcaaagaattcccactaagattaagattctcaataacttttaact |
210 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||| |||||||| || || | |
|
|
| T |
14522694 |
agattcaatgtttctaagcgatttaactgtccaagcattgttggtatggttccattcaaaaaattcccgctaagatcaagatcttcaataacattcaatt |
14522793 |
T |
|
| Q |
211 |
gtccaatctcatcaggaatgtttccttcaaacttattttggctcatatttaagtgtaataacatagataatcttccaagttgttttgggacgaagccact |
310 |
Q |
| |
|
| |||| ||| ||||||||||||||||||||||||||||||||| ||| || || |||||| |||| || |||||||||| || |||| || ||||| |
|
|
| T |
14522794 |
gaccaagttcaacaggaatgtttccttcaaacttattttggctcaaattcaactgcaataacctagacaaccttccaagtttttcagggataaaaccact |
14522893 |
T |
|
| Q |
311 |
taaattatttgttgccagctcaaagatagcaacctccttcaatgaggcaatttgtacaggaacttcccctgaaaagtaattgctacttatcgagagttgt |
410 |
Q |
| |
|
||||||||||||||| || || || ||| | || | |||||| ||||| || | ||||||||| || |||| | ||| |||||||||||||||| |
|
|
| T |
14522894 |
taaattatttgttgcaagatccaatgtagttagttcatgcaatgatgcaatctgcataggaacttctcccgaaagatgattattacttatcgagagttg- |
14522992 |
T |
|
| Q |
411 |
ttgatcaatgaagataagttgcctagctcctttggaatttcgcctgttagttgattcgaggacaaatcaagtaaatgtaaattggttgccccaaccaatt |
510 |
Q |
| |
|
||||| || ||||||||| ||||| ||||||||||||| ||| | |||||||| |||||||| ||||||| ||||||||||||||| || |||||| |
|
|
| T |
14522993 |
--gatcagtgcagataagtttcctagatcctttggaatttttcctataagttgatttgaggacaagtcaagtatatgtaaattggttgcttcagccaatt |
14523090 |
T |
|
| Q |
511 |
ctagtggtatactccctgttaaattattgttggagattttaaggcttatgagattcttgtgtcttccccaattaggtgaaatatggccaaaaattttatt |
610 |
Q |
| |
|
|| ||||||| || ||| |||||||||| |||||||||||||||||| | ||||||||| | |||||||| || |||| || ||| ||| ||||| |
|
|
| T |
14523091 |
ctggtggtatgcttcctattaaattattattggagattttaaggcttgtcagattcttgcacttcccccaatttggagaaagataaccataaaaattatt |
14523190 |
T |
|
| Q |
611 |
accactcaattccatgcagtacaagtttggacacacaccaaagctatctgttatatttccagcaagttggttttgttcaattctcactctctttagactt |
710 |
Q |
| |
|
| |||| ||||| ||| ||| ||| |||||| |||||||||| ||||||||||||||||| | | || |||||| | || ||||| ||| | || || |
|
|
| T |
14523191 |
atcacttaattctatgtagtccaaatttggatacacaccaaaactatctgttatatttcctgtcattttgttttggttaagtctcaatcttataaggcta |
14523290 |
T |
|
| Q |
711 |
gaacaattcttcaaactctttggaattggacctgtgaa |
748 |
Q |
| |
|
||||| ||||||||||||| |||||||||||| ||||| |
|
|
| T |
14523291 |
gaacagttcttcaaactctctggaattggaccagtgaa |
14523328 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 17 - 735
Target Start/End: Complemental strand, 15032609 - 15031879
Alignment:
| Q |
17 |
aatgtttggaattggacccttcaattggttgtatgatatatcaacagttgtcaagcctgacatctcaccataggtcaagggaatggtacaagaaagatt- |
115 |
Q |
| |
|
|||||||||||||||||||| ||| |||||||| |||||||||||||||||||||| | |||| ||| || || | |||||||||||| ||| ||||| |
|
|
| T |
15032609 |
aatgtttggaattggaccctccaactggttgtaagatatatcaacagttgtcaagcttaacatatcaacaaagcttgagggaatggtaccagagagattg |
15032510 |
T |
|
| Q |
116 |
--------------caatgtttctaagcgatttaactgtccaagcattgttggtatggttccattcaaagaattcccactaagattaagattctcaataa |
201 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||| ||||||||||||||||| | ||||||||||||||| |||||| ||||||| |
|
|
| T |
15032509 |
ttatgtgagagattcaatgtttctaagcgatttaactgcccaagcattgatggtatggttccattcataaaattcccactaagatcaagattttcaataa |
15032410 |
T |
|
| Q |
202 |
cttttaactgtccaatctcatcaggaatgtttccttcaaacttattttggctcatatttaagtgtaataacatagataatcttccaagttgttttgggac |
301 |
Q |
| |
|
| || || || ||| |||| |||||||||| || ||||||||||||||||||| |||||| || |||||| ||||||| || |||||| ||| |||| |
|
|
| T |
15032409 |
cattcaattgggcaaactcagcaggaatgttcccctcaaacttattttggctcaaatttaactgcaataacctagataacctaccaagtcttttagggat |
15032310 |
T |
|
| Q |
302 |
gaagccacttaaattatttgttgccagctcaaagatagcaacctccttcaatgaggcaatttgtacaggaacttcccctgaaaagtaattgctacttatc |
401 |
Q |
| |
|
||||||||| |||||||||||||| ||||| || || | ||| | |||||| |||||||||||||||||||| || |||| || |||| |||||| | |
|
|
| T |
15032309 |
gaagccactcaaattatttgttgcaagctccaatgcagttagctcgtgcaatgatgcaatttgtacaggaacttctccagaaaggtgattgttacttaac |
15032210 |
T |
|
| Q |
402 |
gagagttgtttgatcaatgaagataagttgcctagctcctttggaatttcgcctgttagttgattcgaggacaaatcaagtaaatgtaaattggttgccc |
501 |
Q |
| |
|
|||| |||||||||| |||||||||| |||||||||||||||||| || ||||| || || || ||||| | ||| |||||||| ||||| | |
|
|
| T |
15032209 |
gaga---gtttgatcaacaaagataagttttctagctcctttggaatttttcccgttagatggtttgaagacaagttaagctcctgtaaatttgttgcgc |
15032113 |
T |
|
| Q |
502 |
caaccaattctagtggtatactccctgttaaattattgttggagattttaaggcttatgagattcttgtgtcttccccaattaggtgaaatatggccaaa |
601 |
Q |
| |
|
| | ||| ||||||| || |||||||||||||| ||||||||||||||| ||||||||||| |||||||||| || |||| ||| ||| | |
|
|
| T |
15032112 |
tgcctagctctggtggtattcttcctgttaaattattaccagagattttaaggcttgtgagattcttgcactttccccaatttggagaaagatgaccata |
15032013 |
T |
|
| Q |
602 |
aattttattaccactcaattccatgcagtacaagtttggacacacaccaaagctatctgttatatttccagcaagttggttttgttcaattctcactctc |
701 |
Q |
| |
|
|| |||||| || |||| |||||| |||||||||||||| |||||||||| |||| |||||||||||||| ||||||||||| |||| |||||||| |
|
|
| T |
15032012 |
aaaattattatcattcaagtccatgtagtacaagtttggatacacaccaaaactatttgttatatttccagtcagttggttttgatcaagcctcactctt |
15031913 |
T |
|
| Q |
702 |
tttagacttgaacaattcttcaaactctttggaa |
735 |
Q |
| |
|
|| || ||| | |||||||||||||||| ||||| |
|
|
| T |
15031912 |
ttaaggcttaagcaattcttcaaactctctggaa |
15031879 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 195; E-Value: 1e-105
Query Start/End: Original strand, 111 - 751
Target Start/End: Complemental strand, 15017157 - 15016520
Alignment:
| Q |
111 |
agattcaatgtttctaagcgatttaactgtccaagcattgttggtatggttccattcaaagaattcccactaagattaagattctcaataacttttaact |
210 |
Q |
| |
|
|||||||||||||||||| |||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||| |||||| |||||||| || || | |
|
|
| T |
15017157 |
agattcaatgtttctaagtgatttaactggccaagcattgctggtatggttccattcatagaattcccactaagatcaagattttcaataacattcaatt |
15017058 |
T |
|
| Q |
211 |
gtccaatctcatcaggaatgtttccttcaaacttattttggctcatatttaagtgtaataacatagataatcttccaagttgttttgggacgaagccact |
310 |
Q |
| |
|
| |||| |||| |||||||||| || ||||||||||||||||||| |||||| | |||||| |||| || | ||||||| || |||| ||||||||| |
|
|
| T |
15017057 |
ggccaaactcaacaggaatgttcccctcaaacttattttggctcaaatttaacttcaataacctagacaacataccaagtttttcagggatgaagccact |
15016958 |
T |
|
| Q |
311 |
taaattatttgttgccagctcaaagatagcaacctccttcaatgaggcaatttgtacaggaacttcccctgaaaagtaattgctacttatcgagagttgt |
410 |
Q |
| |
|
|||||||||| ||| ||||| || || | || | |||||| |||||||| |||||||||| || |||| | |||| |||||| |||||||| |
|
|
| T |
15016957 |
gaaattatttgctgcaagctccaatgcagttaattcgtgcaatgattcaatttgttcaggaacttctccagaaagatgattgttacttaacgagagtt-- |
15016860 |
T |
|
| Q |
411 |
ttgatcaatgaagataagttgcctagctcctttggaatttcgcctgttagttgattcgaggacaaatcaagtaaatgtaaattggttgccccaaccaatt |
510 |
Q |
| |
|
||||||| |||||||||| |||||||||||||||||| || || || || || || ||||| | |||| ||||||||| ||||| | | | || |
|
|
| T |
15016859 |
-tgatcaacaaagataagttttctagctcctttggaattttccccgtaagatggtttgaagacaagttaagttcatgtaaatttgttgctctgcctagtt |
15016761 |
T |
|
| Q |
511 |
ctagtggtatactccctgttaaattattgttggagattttaaggcttatgagattcttgtgtcttccccaattaggtgaaatatggccaaaaattttatt |
610 |
Q |
| |
|
|| ||||||| || ||||| ||||||||||||||||||||||||||| ||||||||||| |||||||||| || ||||| || ||| | | ||||| |
|
|
| T |
15016760 |
ctggtggtatgcttcctgtcaaattattgttggagattttaaggcttgtgagattcttgcactttccccaatttggagaaatttgaccatacaaattatt |
15016661 |
T |
|
| Q |
611 |
accactcaattccatgcagtacaagtttggacacacaccaaagctatctgttatatttccagcaagttggttttgttcaattctcactctctttagactt |
710 |
Q |
| |
|
| |||||||||||||| ||| |||||||||| |||||||||| |||| |||||||||||||| |||||||||||||||| |||| |||||| || ||| |
|
|
| T |
15016660 |
atcactcaattccatgtagtccaagtttggatacacaccaaaactatttgttatatttccagtcagttggttttgttcaagcctcagtctcttaaggctt |
15016561 |
T |
|
| Q |
711 |
gaacaattcttcaaactctttggaattggacctgtgaactg |
751 |
Q |
| |
|
|| |||||||||||||||| ||||| | | ||||||||||| |
|
|
| T |
15016560 |
gagcaattcttcaaactctctggaactaggcctgtgaactg |
15016520 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 111 - 735
Target Start/End: Complemental strand, 15025159 - 15024538
Alignment:
| Q |
111 |
agattcaatgtttctaagcgatttaactgtccaagcattgttggtatggttccattcaaagaattcccactaagattaagattctcaataacttttaact |
210 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| | ||||||||||||||| |||||| |||||||| || || | |
|
|
| T |
15025159 |
agattcaatgtttctaagcgatttaactgcccaagcattgatggtatggttccattcataaaattcccactaagatcaagattttcaataacattcaatt |
15025060 |
T |
|
| Q |
211 |
gtccaatctcatcaggaatgtttccttcaaacttattttggctcatatttaagtgtaataacatagataatcttccaagttgttttgggacgaagccact |
310 |
Q |
| |
|
| ||| |||| |||||||||| || ||||||||||||||||||| |||||| || |||||| ||||||| || |||||| ||| |||| ||||||||| |
|
|
| T |
15025059 |
gggcaaactcagcaggaatgttcccctcaaacttattttggctcaaatttaactgcaataacctagataacctaccaagtcttttagggatgaagccact |
15024960 |
T |
|
| Q |
311 |
taaattatttgttgccagctcaaagatagcaacctccttcaatgaggcaatttgtacaggaacttcccctgaaaagtaattgctacttatcgagagttgt |
410 |
Q |
| |
|
|||||||||||||| ||||| || || | ||| | |||||| |||||||||||||||||||| || |||| || |||| |||||| ||||| || |
|
|
| T |
15024959 |
caaattatttgttgcaagctccaatgcagttagctcgtgcaatgatgcaatttgtacaggaacttctccagaaaggtgattgttacttaacgaga---gt |
15024863 |
T |
|
| Q |
411 |
ttgatcaatgaagataagttgcctagctcctttggaatttcgcctgttagttgattcgaggacaaatcaagtaaatgtaaattggttgccccaaccaatt |
510 |
Q |
| |
|
|||||||| |||||||||| |||||||||||||||||| || ||||| || || || ||||| | ||| |||||||| ||||| | | | | |
|
|
| T |
15024862 |
ttgatcaacaaagataagttttctagctcctttggaatttttcccgttagatggtttgaagacaagttaagctcctgtaaatttgttgcgctgcctagct |
15024763 |
T |
|
| Q |
511 |
ctagtggtatactccctgttaaattattgttggagattttaaggcttatgagattcttgtgtcttccccaattaggtgaaatatggccaaaaattttatt |
610 |
Q |
| |
|
|| ||||||| || |||||||||||||| ||||||||||||||| ||||||||||| |||||||||| || |||| ||| ||| ||| ||||| |
|
|
| T |
15024762 |
ctggtggtattcttcctgttaaattattaccagagattttaaggcttgtgagattcttgcactttccccaatttggagaaagatgaccataaaaattatt |
15024663 |
T |
|
| Q |
611 |
accactcaattccatgcagtacaagtttggacacacaccaaagctatctgttatatttccagcaagttggttttgttcaattctcactctctttagactt |
710 |
Q |
| |
|
| || |||| |||||| |||||||||||||| |||||||||| |||| |||||||||||||| ||||||||||| |||| |||||||| || || ||| |
|
|
| T |
15024662 |
atcattcaagtccatgtagtacaagtttggatacacaccaaaactatttgttatatttccagtcagttggttttgatcaagcctcactcttttaaggctt |
15024563 |
T |
|
| Q |
711 |
gaacaattcttcaaactctttggaa |
735 |
Q |
| |
|
| |||||||||||||||| ||||| |
|
|
| T |
15024562 |
aagcaattcttcaaactctctggaa |
15024538 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 178; E-Value: 2e-95
Query Start/End: Original strand, 111 - 830
Target Start/End: Complemental strand, 15002149 - 15001433
Alignment:
| Q |
111 |
agattcaatgtttctaagcgatttaactgtccaagcattgttggtatggttccattcaaagaattcccactaagattaagattctcaataacttttaact |
210 |
Q |
| |
|
|||||||||||||||||| |||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||| ||| || |||||||| || || | |
|
|
| T |
15002149 |
agattcaatgtttctaagtgatttaactggccaagcattgctggtatggttccattcatagaattcccactaagatcaaggttttcaataacattcaatt |
15002050 |
T |
|
| Q |
211 |
gtccaatctcatcaggaatgtttccttcaaacttattttggctcatatttaagtgtaataacatagataatcttccaagttgttttgggacgaagccact |
310 |
Q |
| |
|
| |||| |||| |||||||||| || ||||||||||||||||||| |||||| || ||||||||||| || | ||||||| || |||| ||| ||||| |
|
|
| T |
15002049 |
ggccaaactcaacaggaatgttcccctcaaacttattttggctcaaatttaactgcaataacatagacaacataccaagtttttcagggatgaatccact |
15001950 |
T |
|
| Q |
311 |
taaattatttgttgccagctcaaagatagcaacctccttcaatgaggcaatttgtacaggaacttcccctgaaaagtaattgctacttatcgagagttgt |
410 |
Q |
| |
|
|||||||||||||| ||||| || || | | | |||||| ||||||||||| |||||||| || ||| | |||| |||||| ||||| || |
|
|
| T |
15001949 |
caaattatttgttgcaagctccaatgcagttagttgatgcaatgatgcaatttgtactggaacttctccataaagatgattgttacttaacgaga---gt |
15001853 |
T |
|
| Q |
411 |
ttgatcaatgaagataagttgcctagctcctttggaatttcgcctgttagttgattcgaggacaaatcaagtaaatgtaaattggttgccccaaccaatt |
510 |
Q |
| |
|
|||||||| |||||||||| ||| |||||||||||||| | |||| || || || ||||| | ||| |||||||| ||||| | | | || |
|
|
| T |
15001852 |
ttgatcaacaaagataagttttctaactcctttggaatttttcgcattagatggtttgaagacaagttaagctcctgtaaatttgttgctctgcctagtt |
15001753 |
T |
|
| Q |
511 |
ctagtggtatactccctgttaaattattgttggagattttaaggcttatgagattcttgtgtcttccccaattaggtgaaatatggccaaaaattttatt |
610 |
Q |
| |
|
|| ||||||| || ||||| |||||||||||||||||||| |||||| ||||||||||| |||||||||| || |||| ||| ||| ||| ||||| |
|
|
| T |
15001752 |
ctggtggtatgcttcctgtcaaattattgttggagatttttaggcttgtgagattcttgcactttccccaatttggagaaagatgaccataaaaattatt |
15001653 |
T |
|
| Q |
611 |
accactcaattccatgcagtacaagtttggacacacaccaaagctatctgttatatttccagcaagttggttttgttcaattctcactctctttagactt |
710 |
Q |
| |
|
| ||||||| |||||| | | ||| |||||| ||||||||||||| |||||||||||||||| ||||||||||||| || |||||||||| | || ||| |
|
|
| T |
15001652 |
atcactcaaatccatgtattccaaatttggatacacaccaaagctgtctgttatatttccagtcagttggttttgttgaagtctcactctcgtaaggctt |
15001553 |
T |
|
| Q |
711 |
gaacaattcttcaaactctttggaattggacctgtgaactgattatttctagccgagaacacagttaactttccactattacatatattgtgaggtaaat |
810 |
Q |
| |
|
|| |||||||||||||||| ||||| | | ||||||||||| ||| | | | | ||||| ||||||| |||| ||||| |||||||||||||||| |
|
|
| T |
15001552 |
gagcaattcttcaaactctctggaactaggcctgtgaactggttaagtgcaacagtgaacatttttaacttcccaccgttacaaatattgtgaggtaaat |
15001453 |
T |
|
| Q |
811 |
gacctatgaaattattatca |
830 |
Q |
| |
|
|||| | |||||||||||| |
|
|
| T |
15001452 |
gaccaacaaaattattatca |
15001433 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 170; E-Value: 9e-91
Query Start/End: Original strand, 21 - 751
Target Start/End: Complemental strand, 15011147 - 15010405
Alignment:
| Q |
21 |
tttggaattggacccttcaattggttgtatgatatatcaacagttgtcaagcctgacatctcaccataggtcaagggaatggtacaagaaagatt----- |
115 |
Q |
| |
|
|||||||| ||||||| |||||||||||| |||||||||||||||||||||| | |||| ||| || || | |||||||||||| ||| ||||| |
|
|
| T |
15011147 |
tttggaatcggaccctccaattggttgtaagatatatcaacagttgtcaagcttaacatatcaacaaagcttgagggaatggtaccagagagattgttat |
15011048 |
T |
|
| Q |
116 |
----------caatgtttctaagcgatttaactgtccaagcattgttggtatggttccattcaaagaattcccactaagattaagattctcaataacttt |
205 |
Q |
| |
|
||||||||||||| |||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||| |||||| |||||||| || |
|
|
| T |
15011047 |
gtgagagattcaatgtttctaagtgatttaactggccaagcattgctggtatggttccattcatagaattcccactaagatcaagattttcaataacatt |
15010948 |
T |
|
| Q |
206 |
taactgtccaatctcatcaggaatgtttccttcaaacttattttggctcatatttaagtgtaataacatagataatcttccaagttgttttgggacgaag |
305 |
Q |
| |
|
|| || |||| |||| |||||||||| || ||||||||||||||||||| |||||| || ||||||||||| || | ||||||| ||| |||| |||| |
|
|
| T |
15010947 |
caattggccaaactcaacaggaatgttcccctcaaacttattttggctcaaatttaactgcaataacatagacaacataccaagttttttagggatgaag |
15010848 |
T |
|
| Q |
306 |
ccacttaaattatttgttgccagctcaaagatagcaacctccttcaatgaggcaatttgtacaggaacttcccctgaaaagtaattgctacttatcgaga |
405 |
Q |
| |
|
||||| ||||||||| |||| ||||| || || | | | |||||| |||||||||||||||||||| || |||| | |||| |||||| |||| |
|
|
| T |
15010847 |
ccactcaaattatttattgcaagctccaatgcagttagttgatgcaatgatgcaatttgtacaggaacttctccagaaagatgattgttacttaaggaga |
15010748 |
T |
|
| Q |
406 |
gttgtttgatcaatgaagataagttgcctagctcctttggaatttcgcctgttagttgattcgaggacaaatcaagtaaatgtaaattggttgccccaac |
505 |
Q |
| |
|
|||||| ||| ||||||||| ||| |||||||||||||| || |||| || || || ||||| | ||| |||||||| ||||| | | |
|
|
| T |
15010747 |
---gtttgaacaacaaagataagtattctaactcctttggaatttttcccattagatggtttgaagacaagttaagctcctgtaaatttgttgcacttcc |
15010651 |
T |
|
| Q |
506 |
caattctagtggtatactccctgttaaattattgttggagattttaaggcttatgagattcttgtgtcttccccaattaggtgaaatatggccaaaaatt |
605 |
Q |
| |
|
| |||| ||||||| || |||||||||||||| |||||||| |||||| ||||| ||||| |||||||||| || |||| ||| ||| ||| |
|
|
| T |
15010650 |
tagttctggtggtattcttcctgttaaattattaccagagatttttaggcttgtgagaatcttgcactttccccaatttggagaaagatgaccataaaaa |
15010551 |
T |
|
| Q |
606 |
ttattaccactcaattccatgcagtacaagtttggacacacaccaaagctatctgttatatttccagcaagttggttttgttcaattctcactctcttta |
705 |
Q |
| |
|
|||||| |||||||||||||| ||| |||||||||| |||||||||| || |||||||||||||||| |||||||||||| |||| |||| |||| | | |
|
|
| T |
15010550 |
ttattatcactcaattccatgtagtccaagtttggatacacaccaaaactctctgttatatttccagtaagttggttttgatcaagcctcagtctcgtaa |
15010451 |
T |
|
| Q |
706 |
gacttgaacaattcttcaaactctttggaattggacctgtgaactg |
751 |
Q |
| |
|
| ||||| |||||||||||||||| ||||| | | ||||||||||| |
|
|
| T |
15010450 |
ggcttgagcaattcttcaaactctctggaactaggcctgtgaactg |
15010405 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 169; E-Value: 4e-90
Query Start/End: Original strand, 111 - 829
Target Start/End: Complemental strand, 14467845 - 14467130
Alignment:
| Q |
111 |
agattcaatgtttctaagcgatttaactgtccaagcattgttggtatggttccattcaaagaattcccactaagattaagattctcaataacttttaact |
210 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||| ||||| ||| |||||||| |||||| ||||| ||||||||| ||||| |||| ||| ||||| | |
|
|
| T |
14467845 |
agattcaatgtttctaagtgatttaactgtccaaacattgctggaatggttccgttcaaaaaattctcactaagatcaagatcttcaagaacatttaatt |
14467746 |
T |
|
| Q |
211 |
gtccaatctcatcaggaatgtttccttcaaacttattttggctcatatttaagtgtaataacatagataatcttccaagttgttttgggacgaagccact |
310 |
Q |
| |
|
| |||| ||| |||||||||||||||||||| |||||| ||| | ||| |||||||||||||| || || ||||||||||||||||||| | ||||| |
|
|
| T |
14467745 |
ggccaaactcgacaggaatgtttccttcaaacatatttttgcttaaattcaagtgtaataacattgacaaacttccaagttgttttgggattgaaccact |
14467646 |
T |
|
| Q |
311 |
taaattatttgttgccagctcaaagatagcaacctccttcaatgaggcaatttgtacaggaacttcccctgaaaagtaattgctacttatcgagagttgt |
410 |
Q |
| |
|
|||||||||||||| ||||| ||| || | | | | |||||| |||| |||| |||||||||| ||||||| | |||| |||||| ||||||||| |
|
|
| T |
14467645 |
taaattatttgttgaaagctccaaggtatctagtttttgcaatgatgcaacttgtgcaggaacttctcctgaaagatgattgttacttaccgagagttg- |
14467547 |
T |
|
| Q |
411 |
ttgatcaatgaagataagttgcctagctcctttggaatttcgcctgttagttgattcgaggacaaatcaagtaaatgtaaattggttgccccaaccaatt |
510 |
Q |
| |
|
|||||| |||||||| | |||||||||||||||||| || || || || || || |||| | ||| ||||||||| ||||| | | | || |
|
|
| T |
14467546 |
--gatcaacaaagataagctttctagctcctttggaatttttcccgtaagatggtttgaagacaggtttagttcatgtaaatttgttgctcggcctagtt |
14467449 |
T |
|
| Q |
511 |
ctagtggtatactccctgttaaattattgttggagattttaaggcttatgagattcttgtgtcttccccaattaggtgaaatatggccaaaaattttatt |
610 |
Q |
| |
|
|| | ||||| || ||||||||||| || ||| |||||||||||| | |||||||| || | |||||||||| ||||| | ||||||| | | ||||| |
|
|
| T |
14467448 |
ctggcggtatgcttcctgttaaattgttattgaagattttaaggcatgtgagattcatgcattttccccaattcggtgatagatggccatacaaattatt |
14467349 |
T |
|
| Q |
611 |
accactcaattccatgcagtacaagtttggacacacaccaaagctatctgttatatttccagcaagttggttttgttcaattctcactctctttagactt |
710 |
Q |
| |
|
| |||||||||||||| ||| ||| |||||| ||| |||||| ||| |||||||| ||| ||||| ||||||| || || ||||| | || || |
|
|
| T |
14467348 |
atcactcaattccatgtagtccaattttggatgcacgccaaaggcatcagttatattgtcagttagttgattttgttgaagccttactctataaaggcta |
14467249 |
T |
|
| Q |
711 |
gaacaattcttcaaactctttggaattggacctgtgaactgattatttctagccgagaacacagttaactttccactattacatatattgtgaggtaaat |
810 |
Q |
| |
|
|| || ||||||||||||||||||||||| |||||||| || ||||| || || |||||| |||||||||||||| | |||||| ||||||||||||| |
|
|
| T |
14467248 |
gagcagttcttcaaactctttggaattgggcctgtgaattggttattgctggcggagaaccaagttaactttccaccagcacatatgttgtgaggtaaat |
14467149 |
T |
|
| Q |
811 |
gacctatgaaattattatc |
829 |
Q |
| |
|
||||| ||||||||||||| |
|
|
| T |
14467148 |
gacctgtgaaattattatc |
14467130 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 17 - 827
Target Start/End: Original strand, 14532706 - 14533528
Alignment:
| Q |
17 |
aatgtttggaattggacccttcaattggttgtatgatatatcaacagttgtcaagcctgacatctcaccataggtcaagggaatggtacaagaaa----- |
111 |
Q |
| |
|
|||| ||||||||||||||| ||||||||||||||||||||||||| ||||||||| | |||||| ||| ||| |||| |||||||| | ||||| |
|
|
| T |
14532706 |
aatgcttggaattggaccctccaattggttgtatgatatatcaacaattgtcaagcttaacatcttaccgtagctcaaaggaatggttccagaaagatta |
14532805 |
T |
|
| Q |
112 |
----------gattcaatgtttctaagcgatttaactgtccaagcattgttggtatggttccattcaaagaattcccactaagattaagattctcaataa |
201 |
Q |
| |
|
|||||||||||| |||| ||||||||||||||||||||| ||||||||||||| ||| | ||| ||||||||| ||||| ||||||| |
|
|
| T |
14532806 |
ttatgtgaaagattcaatgtttgtaagtgatttaactgtccaagcattgatggtatggttccactcataacattttcactaagatcaagatcttcaataa |
14532905 |
T |
|
| Q |
202 |
cttttaactgtccaatctcatcaggaatgtttccttcaaacttattttggctcatatttaagtgtaataacatagataatcttccaagttgttttgggac |
301 |
Q |
| |
|
| ||||| || ||| |||| |||||||||||||||| |||||||||||||||| ||| || |||| |||| ||| || ||||||||| | | |||| |
|
|
| T |
14532906 |
cctttaattggtcaaactcaacaggaatgtttccttcgaacttattttggctcaaattcaaatgtattaactcagacaaccttccaagtcttctagggat |
14533005 |
T |
|
| Q |
302 |
gaagccacttaaattatttgttgccagctcaaagatagcaacctccttcaatgaggcaatttgtacaggaacttcccctgaaaagtaattgctacttatc |
401 |
Q |
| |
|
||||||||||||||||||| || | ||||| ||| || | ||| || ||| |||||||||||||||||||| || ||| | |||| || ||||| |
|
|
| T |
14533006 |
gaagccacttaaattatttttttcaagctccaaggcagttagtgcctgcagtgatgcaatttgtacaggaacttctcccaaaagattattgttatttatc |
14533105 |
T |
|
| Q |
402 |
gagagttgtttgatcaatgaagataagttgcctagctcctttggaatttcgcctgttagttgattcgaggacaaatcaagtaaatgtaaattggttgccc |
501 |
Q |
| |
|
|||| ||||||| || |||||||||| |||||||||| |||||||| || || || || || || |||| || |||| ||||| | ||||| | |
|
|
| T |
14533106 |
gaga---gtttgattaacaaagataagtttcctagctcctctggaatttttccagtaagatggtttgaagacagattaagttcttgtaattgtgttgctc |
14533202 |
T |
|
| Q |
502 |
caaccaattctagtggtatactccctgttaaattattgttggagattttaaggcttatgagattcttgtgtcttccccaattaggtgaaatatggccaaa |
601 |
Q |
| |
|
|| | | |||| | ||||| || || |||||||||||||||||||||| ||| ||| |||| |||||| | |||||||| ||||| ||||||||| | |
|
|
| T |
14533203 |
cacctagttcttgaggtatgcttccagttaaattattgttggagatttgaagacttgtgagtttcttgcacttaccccaatttggtgatatatggccata |
14533302 |
T |
|
| Q |
602 |
aattttattaccactcaattccatgcagtacaagtttggacacacaccaaagctatctgttatatttccagcaagttggttttgttcaattctcactctc |
701 |
Q |
| |
|
|| |||||| |||||||||||||| ||| ||| |||||| |||| |||||| ||| |||||||| ||| | ||| ||||||| || ||| ||||| |
|
|
| T |
14533303 |
aaaattattatcactcaattccatgtagtccaaatttggatacacgccaaaggcatcagttatattgtcagttatttgattttgttgaagtcttactctg |
14533402 |
T |
|
| Q |
702 |
tttagacttgaacaattcttcaaactctttggaattggacctgtgaactgattatttctagccgagaacacagttaactttccactattacatatattgt |
801 |
Q |
| |
|
| ||||| || || ||||||||||||||||||||||| |||||||| || ||||| || || |||||| ||||||||||| || | ||| || ||| |
|
|
| T |
14533403 |
ataagactggagcacttcttcaaactctttggaattgggcctgtgaattggttattgctggcggagaacttagttaactttctaccagcacaaatgttga |
14533502 |
T |
|
| Q |
802 |
gaggtaaatgacctatgaaattatta |
827 |
Q |
| |
|
|||||||||||||| ||||||||||| |
|
|
| T |
14533503 |
gaggtaaatgacctgtgaaattatta |
14533528 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 160; E-Value: 8e-85
Query Start/End: Original strand, 111 - 872
Target Start/End: Complemental strand, 14504024 - 14503266
Alignment:
| Q |
111 |
agattcaatgtttctaagcgatttaactgtccaagcattgttggtatggttccattcaaagaattcccactaagattaagattctcaataacttttaact |
210 |
Q |
| |
|
||||||||||||||||| |||||||| ||||| ||||| ||||| |||||||||| | |||| ||||| |||| ||||| |||||||| ||||| |
|
|
| T |
14504024 |
agattcaatgtttctaaatgatttaacactccaaacattgaaggtatcgttccattcataaaatttccactgagatcaagatcttcaataacatttaatc |
14503925 |
T |
|
| Q |
211 |
gtccaatctcatcaggaatgtttccttcaaacttattttggctcatatttaagtgtaataacatagataatcttccaagttgttttgggacgaagccact |
310 |
Q |
| |
|
| |||| |||| | ||||||||||||||||||||||||||||||| ||| || |||| |||| ||| || ||||||||| | | |||| ||||||||| |
|
|
| T |
14503924 |
ggccaaactcaacgggaatgtttccttcaaacttattttggctcaaattcaaatgtattaactcagacaaccttccaagtcttctagggatgaagccact |
14503825 |
T |
|
| Q |
311 |
taaattatttgttgccagctcaaagatagcaacctccttcaatgaggcaatttgtacaggaacttcccctgaaaagtaattgctacttatcgagagttgt |
410 |
Q |
| |
|
||||||||||||||| ||||| ||| ||| | | | |||||| |||||||||| |||||| || || |||| | |||| |||||||||||| || |
|
|
| T |
14503824 |
taaattatttgttgcaagctccaaggtagttagtgcttgcaatgatgcaatttgtataggaacctctccagaaagatgattgttacttatcgaga---gt |
14503728 |
T |
|
| Q |
411 |
ttgatcaatgaagataagttgcctagctcctttggaatttcgcctgttagttgattcgaggacaaatcaagtaaatgtaaattggttgccccaaccaatt |
510 |
Q |
| |
|
|||||||| |||| ||||| ||||| ||||||||||||| || || || || || || ||||| | |||| ||||||||| ||| | || |||||| |
|
|
| T |
14503727 |
ttgatcaacaaagacaagtttcctagatcctttggaatttttccagtaagatggtttgatgacaagttaagttcatgtaaattaattgtctcagccaatt |
14503628 |
T |
|
| Q |
511 |
ctagtggtatactccctgttaaattattgttggagattttaaggcttatgagattcttgtgtcttccccaattaggtgaaatatggccaaaaattttatt |
610 |
Q |
| |
|
|| |||||||| | ||||||||||| || |||||||||||||||||| ||||| ||||| |||||||||| ||||| | ||||||| | | ||||| |
|
|
| T |
14503627 |
cttgtggtatatttcctgttaaattgttattggagattttaaggcttgtgagactcttgcactttccccaatttggtgatagatggccatacaaattatt |
14503528 |
T |
|
| Q |
611 |
accactcaattccatgcagtacaagtttggacacacaccaaagctatctgttatatttccagcaagttggttttgttcaattctcactctctttagactt |
710 |
Q |
| |
|
|||||||||||||| ||| ||| | |||| | |||||||| | ||||||||||||||||| | ||| |||| || || || ||||| | || || |
|
|
| T |
14503527 |
ttcactcaattccatgtagtccaaatgtggataaacaccaaaaccatctgttatatttccagttaattgatttttttgaagcctaactctaataaggctg |
14503428 |
T |
|
| Q |
711 |
gaacaattcttcaaactctttggaattggacctgtgaactgattatttctagccgagaacacagttaactttccactattacatatattgtgaggtaaat |
810 |
Q |
| |
|
|| |||||||| ||||||||||||||||| |||||||| || ||||| ||||| | ||| || ||| |||||| | ||| || ||||||||||||| |
|
|
| T |
14503427 |
gagcaattctttaaactctttggaattggccctgtgaattggttattactagcagtgaaatttgtcaacattccaccaacacaaatgttgtgaggtaaat |
14503328 |
T |
|
| Q |
811 |
gacctatgaaattattatcacctaactgcagaatcttcaatttgttaagcctattcatttct |
872 |
Q |
| |
|
| |||||||||||||||||| ||| |||| ||| ||||| ||| | | ||||||||||||| |
|
|
| T |
14503327 |
ggcctatgaaattattatcagataattgcaaaattttcaaattggttatcctattcatttct |
14503266 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 134; E-Value: 3e-69
Query Start/End: Original strand, 17 - 735
Target Start/End: Complemental strand, 15037171 - 15036441
Alignment:
| Q |
17 |
aatgtttggaattggacccttcaattggttgtatgatatatcaacagttgtcaagcctgacatctcaccataggtcaagggaatggtacaagaaagatt- |
115 |
Q |
| |
|
|||||||||||| ||||||| ||| |||||||| |||||||||||||||||||||| | |||| ||| || || | ||||||||||||| ||| ||||| |
|
|
| T |
15037171 |
aatgtttggaatcggaccctccaactggttgtaagatatatcaacagttgtcaagcttaacatatcaacaaagcttaagggaatggtaccagagagattg |
15037072 |
T |
|
| Q |
116 |
--------------caatgtttctaagcgatttaactgtccaagcattgttggtatggttccattcaaagaattcccactaagattaagattctcaataa |
201 |
Q |
| |
|
||||||||||||| |||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||| ||| || ||||||| |
|
|
| T |
15037071 |
ttatgtgagagattcaatgtttctaagtgatttaactggccaagcattgctggtatggttccattcatagaattcccactaagatcaaggttttcaataa |
15036972 |
T |
|
| Q |
202 |
cttttaactgtccaatctcatcaggaatgtttccttcaaacttattttggctcatatttaagtgtaataacatagataatcttccaagttgttttgggac |
301 |
Q |
| |
|
| || || || |||| |||| |||||||||| || |||| |||||| ||||||| ||| || || |||||| |||| || | ||||||| || ||| |
|
|
| T |
15036971 |
cattcaattggccaaactcaacaggaatgttcccctcaagcttattatggctcaaattcaactgcaataacctagacaacataccaagtttttccaggat |
15036872 |
T |
|
| Q |
302 |
gaagccacttaaattatttgttgccagctcaaagatagcaacctccttcaatgaggcaatttgtacaggaacttcccctgaaaagtaattgctacttatc |
401 |
Q |
| |
|
|||||||||||| ||||||||||| ||||| || || | | | |||||| |||||||||||||||||||| || |||| | |||| |||||| | |
|
|
| T |
15036871 |
gaagccacttaagttatttgttgcaagctccaatgcagttagttgatgcaatgatgcaatttgtacaggaacttctccagaaagatgattgttacttaac |
15036772 |
T |
|
| Q |
402 |
gagagttgtttgatcaatgaagataagttgcctagctcctttggaatttcgcctgttagttgattcgaggacaaatcaagtaaatgtaaattggttgccc |
501 |
Q |
| |
|
|||| |||||| ||| ||||||| | ||||||||||||||||| || |||| | || || ||||| | ||| |||||||| ||||| | |
|
|
| T |
15036771 |
gaga---gtttgaacaacaaagataaatattttagctcctttggaatttttcccattagatcgtttgaagacaagttaagctcctgtaaatttgttgctc |
15036675 |
T |
|
| Q |
502 |
caaccaattctagtggtatactccctgttaaattattgttggagattttaaggcttatgagattcttgtgtcttccccaattaggtgaaatatggccaaa |
601 |
Q |
| |
|
| | |||| ||||||| || || ||||||||||| ||||||||| |||||| ||||||||||| |||||||||| || |||| ||| ||| | |
|
|
| T |
15036674 |
tgcctagttctggtggtattcttccagttaaattattaccggagatttttaggcttgtgagattcttgcactttccccaatttggagaaagatgaccata |
15036575 |
T |
|
| Q |
602 |
aattttattaccactcaattccatgcagtacaagtttggacacacaccaaagctatctgttatatttccagcaagttggttttgttcaattctcactctc |
701 |
Q |
| |
|
|| |||||| ||||||| |||||| ||| |||||||||| |||||||||| || |||||||||||||||| ||||||||||| | || |||| |||| |
|
|
| T |
15036574 |
aaaattattatcactcaagtccatgtagtccaagtttggatacacaccaaaactctctgttatatttccagtcagttggttttggttaagcctcaatctc |
15036475 |
T |
|
| Q |
702 |
tttagacttgaacaattcttcaaactctttggaa |
735 |
Q |
| |
|
| || ||||| |||||||||||||||| ||||| |
|
|
| T |
15036474 |
tcaaggcttgagcaattcttcaaactctctggaa |
15036441 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 17 - 300
Target Start/End: Complemental strand, 14482136 - 14481838
Alignment:
| Q |
17 |
aatgtttggaattggacccttcaattggttgtatgatatatcaacagttgtcaagcctgacatctcaccataggtcaagggaatggtacaagaaagatt- |
115 |
Q |
| |
|
|||| ||||||| ||||||| ||| |||||||| |||||||| |||||| |||||| | |||||| |||||| | ||||||||||||| ||||||||| |
|
|
| T |
14482136 |
aatgcttggaatcggaccctccaactggttgtacgatatatctacagttatcaagcttaacatctaaccatatctgaagggaatggtaccagaaagatta |
14482037 |
T |
|
| Q |
116 |
--------------caatgtttctaagcgatttaactgtccaagcattgttggtatggttccattcaaagaattcccactaagattaagattctcaataa |
201 |
Q |
| |
|
||||||||||||| ||||||||||||||| ||||| ||| |||||||| |||||| ||||| ||||||||| ||||| |||| || |
|
|
| T |
14482036 |
ttatgtgagagattcaatgtttctaagtgatttaactgtccaaacattgctggaatggttccgttcaaaaaattctcactaagatcaagatcttcaagaa |
14481937 |
T |
|
| Q |
202 |
cttttaactgtccaatctcatcaggaatgtttccttcaaacttattttggctcatatttaagtgtaataacatagataatcttccaagttgttttggga |
300 |
Q |
| |
|
| ||||| || |||| ||| |||||||||||||||||||| |||||| ||| | ||| |||||||||||||| || || ||||||||||||||||||| |
|
|
| T |
14481936 |
catttaattggccaaactcgacaggaatgtttccttcaaacatatttttgcttaaattcaagtgtaataacattgacaaacttccaagttgttttggga |
14481838 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 17 - 86
Target Start/End: Complemental strand, 14504133 - 14504064
Alignment:
| Q |
17 |
aatgtttggaattggacccttcaattggttgtatgatatatcaacagttgtcaagcctgacatctcacca |
86 |
Q |
| |
|
|||| ||||||| ||||||| ||||||||||||||||||||||| | ||||||||| | |||| |||||| |
|
|
| T |
14504133 |
aatgcttggaatcggaccctccaattggttgtatgatatatcaataattgtcaagcttaacatatcacca |
14504064 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 17 - 70
Target Start/End: Original strand, 14522585 - 14522638
Alignment:
| Q |
17 |
aatgtttggaattggacccttcaattggttgtatgatatatcaacagttgtcaa |
70 |
Q |
| |
|
|||||||||||||||||||| ||| ||||||| |||||||||||||||||||| |
|
|
| T |
14522585 |
aatgtttggaattggaccctccaaccggttgtaagatatatcaacagttgtcaa |
14522638 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 105
Target Start/End: Complemental strand, 15002258 - 15002170
Alignment:
| Q |
17 |
aatgtttggaattggacccttcaattggttgtatgatatatcaacagttgtcaagcctgacatctcaccataggtcaagggaatggtac |
105 |
Q |
| |
|
|||||||||| | ||||||| ||| |||||||| |||||||||||||||||||||| | |||| ||| || || | |||||||||||| |
|
|
| T |
15002258 |
aatgtttggagtcggaccctccaactggttgtaagatatatcaacagttgtcaagcttaacatatcaacaaagctttagggaatggtac |
15002170 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 105
Target Start/End: Complemental strand, 15017266 - 15017178
Alignment:
| Q |
17 |
aatgtttggaattggacccttcaattggttgtatgatatatcaacagttgtcaagcctgacatctcaccataggtcaagggaatggtac |
105 |
Q |
| |
|
|||||||||| | ||||||| ||| |||||||| |||| ||||||||||||||||| | |||| ||| || || | |||||||||||| |
|
|
| T |
15017266 |
aatgtttggagtcggaccctccaactggttgtaagatacatcaacagttgtcaagcttaacatatcaacaaagcttgagggaatggtac |
15017178 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 72
Target Start/End: Complemental strand, 14467954 - 14467899
Alignment:
| Q |
17 |
aatgtttggaattggacccttcaattggttgtatgatatatcaacagttgtcaagc |
72 |
Q |
| |
|
|||| ||||||| ||||||| ||| |||||||| |||||||| ||||||||||||| |
|
|
| T |
14467954 |
aatgcttggaatcggaccctccaactggttgtacgatatatctacagttgtcaagc |
14467899 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0400 (Bit Score: 286; Significance: 1e-160; HSPs: 2)
Name: scaffold0400
Description:
Target: scaffold0400; HSP #1
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 17 - 871
Target Start/End: Complemental strand, 6642 - 5776
Alignment:
| Q |
17 |
aatgtttggaattggacccttcaattggttgtatgatatatcaacagttgtcaagcctgacatctcaccataggtcaagggaatggtacaagaaa----- |
111 |
Q |
| |
|
|||||||||||||||||| | |||||||||||||||||||||| |||||| |||| |||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
6642 |
aatgtttggaattggaccttcaaattggttgtatgatatatcaatagttgttaagcttgacatctcaccataggtcaagggaatggtaccagaaaaatta |
6543 |
T |
|
| Q |
112 |
----------gattcaatgtttctaagcgatttaactgtccaagcattgttggtatggttccattcaaagaattcccactaagattaagattctcaataa |
201 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||| | ||||||| |||||| ||||||| |
|
|
| T |
6542 |
ttatgtgagagattcaatgtttctaagcgatttaactctccaagcattgttggtatggttccattcaaaacattctcgctaagatcaagattttcaataa |
6443 |
T |
|
| Q |
202 |
cttttaactgtccaatctcatcaggaatgtttccttcaaacttattttggctcatatttaagtgtaataacatagataatcttccaagttgttttgggac |
301 |
Q |
| |
|
||| || ||||||| |||| ||||||||| ||||||||||||||||||||||| ||| |||| ||||| ||| ||||||||||||||||| ||||| |
|
|
| T |
6442 |
ttttcaattgtccaaactcagcaggaatgtctccttcaaacttattttggctcaaattcaagtccaataaattaggtaatcttccaagttgttctgggat |
6343 |
T |
|
| Q |
302 |
gaagccacttaaattatttgttgccagctcaaagatagcaacctccttcaatgaggcaatttgtacaggaacttcccctgaaaagtaattgctacttatc |
401 |
Q |
| |
|
||||||||| |||||||||||||| ||||| ||||||| | | | |||| | ||||||||| |||||||||| ||| || | ||||||||||||| |
|
|
| T |
6342 |
gaagccactgaaattatttgttgcaagctccaagatagttattttatgcaataatgcaatttgttcaggaacttctcctacaagatgattgctacttatc |
6243 |
T |
|
| Q |
402 |
gagagttgtttgatcaatgaagataagttgcctagctcctttggaatttcgcctgttagttgattcgaggacaaatcaagtaaatgtaaattggttgccc |
501 |
Q |
| |
|
|||| || ||||||||| |||||||| |||||||||||||||||||| ||||| |||||||||||||| | || |||| | |||||||||||| |
|
|
| T |
6242 |
aagagctg---gatcaatgaggataagtttcctagctcctttggaatttctcctgtgagttgattcgaggaaaggtccagtatagttaaattggttgctt |
6146 |
T |
|
| Q |
502 |
caaccaattctagtggtatactccctgttaaattattgttggagattttaaggcttatgagattcttgtgtcttccccaattaggtgaaatatggccaaa |
601 |
Q |
| |
|
| ||||||| ||||||| || |||| || |||||| ||| | | |||||||||| ||||||||||| |||||||||| || || | ||| ||| | |
|
|
| T |
6145 |
cggccaattcgggtggtatgcttcctgatatattattattgaaaactttaaggcttgtgagattcttgcactttccccaatttggagagagatgaccata |
6046 |
T |
|
| Q |
602 |
aattttattaccactcaattccatgcagtacaagtttggacacacaccaaagctatctgttatatttccagcaagttggttttgttcaattctcactctc |
701 |
Q |
| |
|
|| |||||| ||||||||||||| | | ||| || ||| |||||||||||||||||||||||||| ||| ||||||||||||| || |||||||||| |
|
|
| T |
6045 |
aaaattattatcactcaattccatatattccaaattcggatacacaccaaagctatctgttatatttgcagtcagttggttttgttgaagtctcactctc |
5946 |
T |
|
| Q |
702 |
tttagacttgaacaattcttcaaactctttggaattggacctgtgaactgattatttctagccgagaacacagttaactttccactattacatatattgt |
801 |
Q |
| |
|
|| || ||||| ||||| || ||||||||||||| | |||| ||||||| ||||| |||| ||||| |||||||||||||||| ||||||||||| |
|
|
| T |
5945 |
ttaaggcttgagcaattttttaaactctttggaactagaccaatgaactggttattactagtggagaaacgagttaactttccactaacacatatattgt |
5846 |
T |
|
| Q |
802 |
gaggtaaatgacctatgaaattattatcacctaactgcagaatcttcaatttgttaagcctattcatttc |
871 |
Q |
| |
|
|||||||||||||| |||||||||||| | |||||| ||||| | || || |||||||||||||||| |
|
|
| T |
5845 |
gaggtaaatgacctgtgaaattattattgcataactggagaatttcaaaattagtaagcctattcatttc |
5776 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0400; HSP #2
Raw Score: 139; E-Value: 3e-72
Query Start/End: Original strand, 17 - 836
Target Start/End: Complemental strand, 12930 - 12099
Alignment:
| Q |
17 |
aatgtttggaattggacccttcaattggttgtatgatatatcaacagttgtcaagcctgacatctcaccataggtcaagggaatggtacaagaaagatt- |
115 |
Q |
| |
|
|||||| ||||| ||||||| ||||||||||||||||||||||||| ||||||||| | |||||| ||| ||| |||| |||||||| | ||||||||| |
|
|
| T |
12930 |
aatgttaggaatcggaccctccaattggttgtatgatatatcaacaattgtcaagcttaacatcttaccgtagctcaaaggaatggttccagaaagatta |
12831 |
T |
|
| Q |
116 |
--------------caatgtttctaagcgatttaactgtccaagcattgttggtatggttccattcaaagaattcccactaagattaagattctcaataa |
201 |
Q |
| |
|
|||||||| || | ||||||||||||||||||||| |||||||||||| |||||| |||| |||||||| | ||||| ||||||| |
|
|
| T |
12830 |
ttatgtgaaagattcaatgtttgtatgtgatttaactgtccaagcattgatggtatggttccgttcaaaaaatttccactaaggtcaagatcttcaataa |
12731 |
T |
|
| Q |
202 |
cttttaactgtccaatctcatcaggaatgtttccttcaaacttattttggctcatatttaagtgtaataacatagataatcttccaagttgttttgggac |
301 |
Q |
| |
|
||| ||| || |||| |||| |||||||||||||||||| |||||||||||| ||| || |||| |||| ||| || ||||||||| | | |||| |
|
|
| T |
12730 |
cttctaattggccaaactcaatgggaatgtttccttcaaacctattttggctcaaattcaaatgtattaactcagacaaccttccaagtcttctagggat |
12631 |
T |
|
| Q |
302 |
gaagccacttaaattatttgttgccagctcaaagatagcaacctccttcaatgaggcaatttgtacaggaacttcccctgaaaagtaattgctacttatc |
401 |
Q |
| |
|
||||||||||||||||||| || | ||||| ||| || | ||| || ||| |||||||||||||||||||| || ||| | |||| || ||||| |
|
|
| T |
12630 |
gaagccacttaaattatttttttcaagctccaaggcagttagtgcctgcagtgatgcaatttgtacaggaacttctcccaaaagattattgttatttatc |
12531 |
T |
|
| Q |
402 |
gagagttgtttgatcaatgaagataagttgcctagctcctttggaatttcgcctgttagttgattcgaggacaaatcaagtaaatgtaaattggttgccc |
501 |
Q |
| |
|
|||| ||||||| || |||||||||| ||||||||||||||||||| || || || || || || |||| || |||| ||||| | ||||| | |
|
|
| T |
12530 |
gaga---gtttgattaacaaagataagtttcctagctcctttggaatttttccagtaagatggtttgaagacagattaagttcttgtaattgtgttgctc |
12434 |
T |
|
| Q |
502 |
caaccaattctagtggtatactccctgttaaattattgttggagattttaaggcttatgagattcttgtgtcttccccaattaggtgaaatatggccaaa |
601 |
Q |
| |
|
|| | | |||| | ||||| || || |||||||||||||||||||||| ||| ||| |||| |||||| | |||||||| ||||| ||||||||| | |
|
|
| T |
12433 |
cacctagttcttgcggtatgcttccagttaaattattgttggagatttgaagacttgtgagtttcttgcacttaccccaatttggtgatatatggccata |
12334 |
T |
|
| Q |
602 |
aattttattaccactcaattccatgcagtacaagtttggacacacaccaaagctatctgttatatttccagcaagttggttttgttcaattctcactctc |
701 |
Q |
| |
|
|| |||||| |||| ||||||||| || ||| | |||| | |||||||| | ||||||||||||||||| | ||| |||| || || || ||||| |
|
|
| T |
12333 |
aaaattattatcacttaattccatgtagaccaaatgtggataaacaccaaaaccatctgttatatttccagttaattgatttttttgaagcctaactcta |
12234 |
T |
|
| Q |
702 |
tttagacttgaacaattcttcaaactctttggaattggacctgtgaactgattatttctagccgagaacacagttaactttccactattacatatattgt |
801 |
Q |
| |
|
| || || || ||||||||||||||| |||||| | |||||||| |||||||| || | |||| | ||||||||||||| ||| || |||| |
|
|
| T |
12233 |
ataaggctggagcaattcttcaaactcattggaactaatcctgtgaaatgattattggatgcagtgaaccaatataactttccactaacacaaatgttgt |
12134 |
T |
|
| Q |
802 |
gaggtaaatgacctatgaaattattatcacctaac |
836 |
Q |
| |
|
| ||||| |||||| |||||||||||||||||||| |
|
|
| T |
12133 |
gcggtaattgacctgtgaaattattatcacctaac |
12099 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0365 (Bit Score: 286; Significance: 1e-160; HSPs: 2)
Name: scaffold0365
Description:
Target: scaffold0365; HSP #1
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 17 - 871
Target Start/End: Complemental strand, 7286 - 6420
Alignment:
| Q |
17 |
aatgtttggaattggacccttcaattggttgtatgatatatcaacagttgtcaagcctgacatctcaccataggtcaagggaatggtacaagaaa----- |
111 |
Q |
| |
|
|||||||||||||||||| | |||||||||||||||||||||| |||||| |||| |||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
7286 |
aatgtttggaattggaccttcaaattggttgtatgatatatcaatagttgttaagcttgacatctcaccataggtcaagggaatggtaccagaaaaatta |
7187 |
T |
|
| Q |
112 |
----------gattcaatgtttctaagcgatttaactgtccaagcattgttggtatggttccattcaaagaattcccactaagattaagattctcaataa |
201 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||| | ||||||| |||||| ||||||| |
|
|
| T |
7186 |
ttatgtgagagattcaatgtttctaagcgatttaactctccaagcattgttggtatggttccattcaaaacattctcgctaagatcaagattttcaataa |
7087 |
T |
|
| Q |
202 |
cttttaactgtccaatctcatcaggaatgtttccttcaaacttattttggctcatatttaagtgtaataacatagataatcttccaagttgttttgggac |
301 |
Q |
| |
|
||| || ||||||| |||| ||||||||| ||||||||||||||||||||||| ||| |||| ||||| ||| ||||||||||||||||| ||||| |
|
|
| T |
7086 |
ttttcaattgtccaaactcagcaggaatgtctccttcaaacttattttggctcaaattcaagtccaataaattaggtaatcttccaagttgttctgggat |
6987 |
T |
|
| Q |
302 |
gaagccacttaaattatttgttgccagctcaaagatagcaacctccttcaatgaggcaatttgtacaggaacttcccctgaaaagtaattgctacttatc |
401 |
Q |
| |
|
||||||||| |||||||||||||| ||||| ||||||| | | | |||| | ||||||||| |||||||||| ||| || | ||||||||||||| |
|
|
| T |
6986 |
gaagccactgaaattatttgttgcaagctccaagatagttattttatgcaataatgcaatttgttcaggaacttctcctacaagatgattgctacttatc |
6887 |
T |
|
| Q |
402 |
gagagttgtttgatcaatgaagataagttgcctagctcctttggaatttcgcctgttagttgattcgaggacaaatcaagtaaatgtaaattggttgccc |
501 |
Q |
| |
|
|||| || ||||||||| |||||||| |||||||||||||||||||| ||||| |||||||||||||| | || |||| | |||||||||||| |
|
|
| T |
6886 |
aagagctg---gatcaatgaggataagtttcctagctcctttggaatttctcctgtgagttgattcgaggaaaggtccagtatagttaaattggttgctt |
6790 |
T |
|
| Q |
502 |
caaccaattctagtggtatactccctgttaaattattgttggagattttaaggcttatgagattcttgtgtcttccccaattaggtgaaatatggccaaa |
601 |
Q |
| |
|
| ||||||| ||||||| || |||| || |||||| ||| | | |||||||||| ||||||||||| |||||||||| || || | ||| ||| | |
|
|
| T |
6789 |
cggccaattcgggtggtatgcttcctgatatattattattgaaaactttaaggcttgtgagattcttgcactttccccaatttggagagagatgaccata |
6690 |
T |
|
| Q |
602 |
aattttattaccactcaattccatgcagtacaagtttggacacacaccaaagctatctgttatatttccagcaagttggttttgttcaattctcactctc |
701 |
Q |
| |
|
|| |||||| ||||||||||||| | | ||| || ||| |||||||||||||||||||||||||| ||| ||||||||||||| || |||||||||| |
|
|
| T |
6689 |
aaaattattatcactcaattccatatattccaaattcggatacacaccaaagctatctgttatatttgcagtcagttggttttgttgaagtctcactctc |
6590 |
T |
|
| Q |
702 |
tttagacttgaacaattcttcaaactctttggaattggacctgtgaactgattatttctagccgagaacacagttaactttccactattacatatattgt |
801 |
Q |
| |
|
|| || ||||| ||||| || ||||||||||||| | |||| ||||||| ||||| |||| ||||| |||||||||||||||| ||||||||||| |
|
|
| T |
6589 |
ttaaggcttgagcaattttttaaactctttggaactagaccaatgaactggttattactagtggagaaacgagttaactttccactaacacatatattgt |
6490 |
T |
|
| Q |
802 |
gaggtaaatgacctatgaaattattatcacctaactgcagaatcttcaatttgttaagcctattcatttc |
871 |
Q |
| |
|
|||||||||||||| |||||||||||| | |||||| ||||| | || || |||||||||||||||| |
|
|
| T |
6489 |
gaggtaaatgacctgtgaaattattattgcataactggagaatttcaaaattagtaagcctattcatttc |
6420 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0365; HSP #2
Raw Score: 139; E-Value: 3e-72
Query Start/End: Original strand, 17 - 836
Target Start/End: Complemental strand, 13573 - 12742
Alignment:
| Q |
17 |
aatgtttggaattggacccttcaattggttgtatgatatatcaacagttgtcaagcctgacatctcaccataggtcaagggaatggtacaagaaagatt- |
115 |
Q |
| |
|
|||||| ||||| ||||||| ||||||||||||||||||||||||| ||||||||| | |||||| ||| ||| |||| |||||||| | ||||||||| |
|
|
| T |
13573 |
aatgttaggaatcggaccctccaattggttgtatgatatatcaacaattgtcaagcttaacatcttaccgtagctcaaaggaatggttccagaaagatta |
13474 |
T |
|
| Q |
116 |
--------------caatgtttctaagcgatttaactgtccaagcattgttggtatggttccattcaaagaattcccactaagattaagattctcaataa |
201 |
Q |
| |
|
|||||||| || | ||||||||||||||||||||| |||||||||||| |||||| |||| |||||||| | ||||| ||||||| |
|
|
| T |
13473 |
ttatgtgaaagattcaatgtttgtatgtgatttaactgtccaagcattgatggtatggttccgttcaaaaaatttccactaaggtcaagatcttcaataa |
13374 |
T |
|
| Q |
202 |
cttttaactgtccaatctcatcaggaatgtttccttcaaacttattttggctcatatttaagtgtaataacatagataatcttccaagttgttttgggac |
301 |
Q |
| |
|
||| ||| || |||| |||| |||||||||||||||||| |||||||||||| ||| || |||| |||| ||| || ||||||||| | | |||| |
|
|
| T |
13373 |
cttctaattggccaaactcaatgggaatgtttccttcaaacctattttggctcaaattcaaatgtattaactcagacaaccttccaagtcttctagggat |
13274 |
T |
|
| Q |
302 |
gaagccacttaaattatttgttgccagctcaaagatagcaacctccttcaatgaggcaatttgtacaggaacttcccctgaaaagtaattgctacttatc |
401 |
Q |
| |
|
||||||||||||||||||| || | ||||| ||| || | ||| || ||| |||||||||||||||||||| || ||| | |||| || ||||| |
|
|
| T |
13273 |
gaagccacttaaattatttttttcaagctccaaggcagttagtgcctgcagtgatgcaatttgtacaggaacttctcccaaaagattattgttatttatc |
13174 |
T |
|
| Q |
402 |
gagagttgtttgatcaatgaagataagttgcctagctcctttggaatttcgcctgttagttgattcgaggacaaatcaagtaaatgtaaattggttgccc |
501 |
Q |
| |
|
|||| ||||||| || |||||||||| ||||||||||||||||||| || || || || || || |||| || |||| ||||| | ||||| | |
|
|
| T |
13173 |
gaga---gtttgattaacaaagataagtttcctagctcctttggaatttttccagtaagatggtttgaagacagattaagttcttgtaattgtgttgctc |
13077 |
T |
|
| Q |
502 |
caaccaattctagtggtatactccctgttaaattattgttggagattttaaggcttatgagattcttgtgtcttccccaattaggtgaaatatggccaaa |
601 |
Q |
| |
|
|| | | |||| | ||||| || || |||||||||||||||||||||| ||| ||| |||| |||||| | |||||||| ||||| ||||||||| | |
|
|
| T |
13076 |
cacctagttcttgcggtatgcttccagttaaattattgttggagatttgaagacttgtgagtttcttgcacttaccccaatttggtgatatatggccata |
12977 |
T |
|
| Q |
602 |
aattttattaccactcaattccatgcagtacaagtttggacacacaccaaagctatctgttatatttccagcaagttggttttgttcaattctcactctc |
701 |
Q |
| |
|
|| |||||| |||| ||||||||| || ||| | |||| | |||||||| | ||||||||||||||||| | ||| |||| || || || ||||| |
|
|
| T |
12976 |
aaaattattatcacttaattccatgtagaccaaatgtggataaacaccaaaaccatctgttatatttccagttaattgatttttttgaagcctaactcta |
12877 |
T |
|
| Q |
702 |
tttagacttgaacaattcttcaaactctttggaattggacctgtgaactgattatttctagccgagaacacagttaactttccactattacatatattgt |
801 |
Q |
| |
|
| || || || ||||||||||||||| |||||| | |||||||| |||||||| || | |||| | ||||||||||||| ||| || |||| |
|
|
| T |
12876 |
ataaggctggagcaattcttcaaactcattggaactaatcctgtgaaatgattattggatgcagtgaaccaatataactttccactaacacaaatgttgt |
12777 |
T |
|
| Q |
802 |
gaggtaaatgacctatgaaattattatcacctaac |
836 |
Q |
| |
|
| ||||| |||||| |||||||||||||||||||| |
|
|
| T |
12776 |
gcggtaattgacctgtgaaattattatcacctaac |
12742 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 5)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 108 - 235
Target Start/End: Original strand, 15670747 - 15670874
Alignment:
| Q |
108 |
gaaagattcaatgtttctaagcgatttaactgtccaagcattgttggtatggttccattcaaagaattcccactaagattaagattctcaataactttta |
207 |
Q |
| |
|
|||| |||||||||||||||||| || | | ||||||||||| |||||| | |||||||||| ||| ||||| |||| |||| | |||| ||||| | |
|
|
| T |
15670747 |
gaaatattcaatgtttctaagcgtttcaggtttccaagcattggtggtatagctccattcaaaacatttccactgagatcaagactttcaaggactttaa |
15670846 |
T |
|
| Q |
208 |
actgtccaatctcatcaggaatgtttcc |
235 |
Q |
| |
|
| ||||||| |||||||||||| ||||| |
|
|
| T |
15670847 |
attgtccaaactcatcaggaatatttcc |
15670874 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 643 - 690
Target Start/End: Complemental strand, 17848044 - 17847997
Alignment:
| Q |
643 |
acacaccaaagctatctgttatatttccagcaagttggttttgttcaa |
690 |
Q |
| |
|
||||||||||| ||||||||||||||||| ||||||||||||||||| |
|
|
| T |
17848044 |
acacaccaaagaaatctgttatatttccagaaagttggttttgttcaa |
17847997 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 657 - 757
Target Start/End: Complemental strand, 14605397 - 14605297
Alignment:
| Q |
657 |
tctgttatatttccagcaagttggttttgttcaattctcactctctttagacttgaacaattcttcaaactctttggaattggacctgtgaactgattat |
756 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||| ||| | || | | || || |||||||||||||||||||||| || |||||||| || |||| |
|
|
| T |
14605397 |
tctgttatatttccagtaagttggttttgttcaagtctaatcctaataatgctagagcaattcttcaaactctttggaactgagcctgtgaagtggttat |
14605298 |
T |
|
| Q |
757 |
t |
757 |
Q |
| |
|
| |
|
|
| T |
14605297 |
t |
14605297 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 235
Target Start/End: Original strand, 15677149 - 15677276
Alignment:
| Q |
108 |
gaaagattcaatgtttctaagcgatttaactgtccaagcattgttggtatggttccattcaaagaattcccactaagattaagattctcaataactttta |
207 |
Q |
| |
|
|||| |||||||||||||||||| || | | ||||||||||| |||||||| ||| |||||| ||| ||||| |||| |||| | |||| ||||| | |
|
|
| T |
15677149 |
gaaatattcaatgtttctaagcgtttcaggtttccaagcattggtggtatggctcctttcaaaacatttccactgagatcaagactttcaaggactttaa |
15677248 |
T |
|
| Q |
208 |
actgtccaatctcatcaggaatgtttcc |
235 |
Q |
| |
|
| ||||||| |||| |||||| ||||| |
|
|
| T |
15677249 |
attgtccaaactcaaaaggaatatttcc |
15677276 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 72
Target Start/End: Complemental strand, 16103019 - 16102976
Alignment:
| Q |
29 |
tggacccttcaattggttgtatgatatatcaacagttgtcaagc |
72 |
Q |
| |
|
|||||||| ||||||||| |||||||||||||||| |||||||| |
|
|
| T |
16103019 |
tggaccctccaattggttatatgatatatcaacagatgtcaagc |
16102976 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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