View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20706_high_26 (Length: 401)

Name: NF20706_high_26
Description: NF20706
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20706_high_26
NF20706_high_26
[»] chr2 (12 HSPs)
chr2 (1-193)||(43900019-43900211)
chr2 (190-401)||(43900416-43900627)
chr2 (200-400)||(30906062-30906262)
chr2 (200-395)||(45305865-45306059)
chr2 (281-401)||(1400784-1400903)
chr2 (302-401)||(33667316-33667414)
chr2 (292-401)||(28527333-28527441)
chr2 (253-385)||(7378495-7378625)
chr2 (213-318)||(1400680-1400785)
chr2 (253-318)||(28527269-28527334)
chr2 (215-312)||(41212411-41212507)
chr2 (215-318)||(33667413-33667516)
[»] chr7 (27 HSPs)
chr7 (198-401)||(20556662-20556865)
chr7 (200-400)||(31303351-31303551)
chr7 (197-401)||(18312722-18312925)
chr7 (242-401)||(21548393-21548551)
chr7 (269-401)||(21589590-21589722)
chr7 (264-401)||(4290789-4290925)
chr7 (200-392)||(32964651-32964852)
chr7 (252-401)||(22740669-22740818)
chr7 (248-401)||(5083802-5083954)
chr7 (242-349)||(15958378-15958483)
chr7 (216-318)||(21589721-21589823)
chr7 (311-400)||(28805001-28805089)
chr7 (199-304)||(28805130-28805235)
chr7 (315-392)||(46943761-46943839)
chr7 (207-316)||(31303553-31303661)
chr7 (213-298)||(28804893-28804978)
chr7 (308-350)||(2887188-2887230)
chr7 (213-319)||(32964848-32964954)
chr7 (253-318)||(15958259-15958324)
chr7 (253-318)||(21548550-21548615)
chr7 (253-318)||(22033158-22033223)
chr7 (242-318)||(18312924-18313000)
chr7 (346-401)||(5174910-5174965)
chr7 (315-401)||(27523497-27523583)
chr7 (199-300)||(5174792-5174893)
chr7 (257-318)||(20556867-20556928)
chr7 (221-298)||(22032980-22033056)
[»] chr8 (23 HSPs)
chr8 (198-400)||(38606839-38607041)
chr8 (197-401)||(1251487-1251690)
chr8 (199-395)||(31273578-31273774)
chr8 (245-390)||(29367076-29367221)
chr8 (245-395)||(5321978-5322128)
chr8 (259-393)||(15714713-15714847)
chr8 (248-393)||(5573726-5573871)
chr8 (270-401)||(1240911-1241041)
chr8 (253-401)||(26493347-26493492)
chr8 (200-401)||(31596693-31596893)
chr8 (197-348)||(33286112-33286263)
chr8 (315-392)||(15233241-15233318)
chr8 (201-290)||(24576181-24576270)
chr8 (311-393)||(6809804-6809886)
chr8 (213-316)||(38606734-38606837)
chr8 (356-401)||(24575917-24575962)
chr8 (264-377)||(32959522-32959635)
chr8 (201-299)||(28700039-28700136)
chr8 (269-318)||(40502387-40502436)
chr8 (211-318)||(15714599-15714706)
chr8 (264-318)||(24575864-24575918)
chr8 (327-392)||(28700175-28700240)
chr8 (269-318)||(40502175-40502224)
[»] chr6 (28 HSPs)
chr6 (246-401)||(10304710-10304865)
chr6 (202-401)||(3222332-3222530)
chr6 (264-401)||(33815026-33815163)
chr6 (200-401)||(22608259-22608459)
chr6 (203-340)||(23595055-23595192)
chr6 (200-401)||(3620770-3620970)
chr6 (307-401)||(138725-138819)
chr6 (307-401)||(146746-146840)
chr6 (213-391)||(9474545-9474718)
chr6 (307-401)||(9068411-9068504)
chr6 (199-340)||(11108147-11108288)
chr6 (314-401)||(2834974-2835061)
chr6 (201-318)||(7706758-7706876)
chr6 (213-318)||(2835060-2835165)
chr6 (197-290)||(24386337-24386430)
chr6 (213-318)||(2430513-2430618)
chr6 (222-318)||(9068503-9068599)
chr6 (355-401)||(2430617-2430663)
chr6 (264-318)||(2430650-2430704)
chr6 (238-304)||(9068329-9068394)
chr6 (269-318)||(15341858-15341907)
chr6 (197-290)||(20084571-20084664)
chr6 (238-318)||(138646-138726)
chr6 (238-318)||(146667-146747)
chr6 (242-290)||(10304636-10304684)
chr6 (211-313)||(7915696-7915798)
chr6 (253-298)||(30056072-30056117)
chr6 (253-297)||(11108116-11108160)
[»] chr4 (29 HSPs)
chr4 (198-401)||(9808970-9809173)
chr4 (202-393)||(16583496-16583687)
chr4 (198-390)||(9810656-9810848)
chr4 (200-395)||(33179775-33179970)
chr4 (200-398)||(17633354-17633552)
chr4 (242-393)||(55666844-55666993)
chr4 (253-398)||(35544433-35544577)
chr4 (200-401)||(8740801-8741002)
chr4 (202-396)||(19596680-19596876)
chr4 (293-401)||(1966843-1966950)
chr4 (283-393)||(2433693-2433802)
chr4 (252-401)||(42908519-42908667)
chr4 (295-393)||(33249634-33249732)
chr4 (243-393)||(14351005-14351153)
chr4 (315-392)||(24669197-24669274)
chr4 (281-349)||(20874812-20874880)
chr4 (213-315)||(1966741-1966841)
chr4 (242-319)||(24669270-24669347)
chr4 (199-290)||(19746943-19747034)
chr4 (199-290)||(19792772-19792863)
chr4 (201-288)||(25007625-25007711)
chr4 (221-298)||(9810881-9810958)
chr4 (213-318)||(14351160-14351265)
chr4 (213-298)||(19596901-19596986)
chr4 (293-331)||(1966978-1967016)
chr4 (221-298)||(9809194-9809271)
chr4 (253-298)||(17633288-17633333)
chr4 (200-285)||(20871742-20871827)
chr4 (242-298)||(42908685-42908741)
[»] chr3 (40 HSPs)
chr3 (238-401)||(42637966-42638129)
chr3 (198-401)||(3785858-3786061)
chr3 (198-401)||(3823547-3823751)
chr3 (198-396)||(9710739-9710931)
chr3 (199-401)||(44080153-44080355)
chr3 (200-401)||(4169115-4169305)
chr3 (269-401)||(26308650-26308782)
chr3 (199-401)||(1705680-1705880)
chr3 (200-393)||(19280098-19280288)
chr3 (259-396)||(5341833-5341970)
chr3 (203-368)||(11509804-11509969)
chr3 (253-401)||(19624257-19624404)
chr3 (292-401)||(31545606-31545715)
chr3 (315-392)||(27335402-27335479)
chr3 (269-401)||(27707641-27707772)
chr3 (242-373)||(23163268-23163400)
chr3 (307-401)||(42481305-42481399)
chr3 (198-393)||(22432233-22432421)
chr3 (238-394)||(34627316-34627468)
chr3 (294-393)||(13358110-13358208)
chr3 (252-393)||(27079314-27079454)
chr3 (252-393)||(27085111-27085251)
chr3 (315-392)||(27326047-27326124)
chr3 (315-392)||(27332284-27332361)
chr3 (222-318)||(31545714-31545810)
chr3 (315-392)||(27365008-27365085)
chr3 (242-300)||(13358992-13359050)
chr3 (333-383)||(23163787-23163837)
chr3 (269-363)||(41571810-41571904)
chr3 (341-393)||(11501309-11501361)
chr3 (199-262)||(31545423-31545486)
chr3 (213-315)||(19280298-19280400)
chr3 (253-315)||(26308586-26308648)
chr3 (327-393)||(39126189-39126254)
chr3 (242-315)||(1705605-1705678)
chr3 (269-318)||(22432428-22432477)
chr3 (199-315)||(27040683-27040799)
chr3 (357-395)||(11509989-11510027)
chr3 (213-295)||(18733595-18733677)
chr3 (253-305)||(5341987-5342039)
[»] chr1 (26 HSPs)
chr1 (207-401)||(34490094-34490286)
chr1 (200-401)||(34364131-34364330)
chr1 (294-401)||(29677095-29677202)
chr1 (264-401)||(25238439-25238575)
chr1 (276-401)||(42604192-42604317)
chr1 (277-394)||(29167827-29167943)
chr1 (257-392)||(9468064-9468199)
chr1 (203-391)||(517433-517623)
chr1 (200-401)||(5831431-5831631)
chr1 (242-398)||(38951844-38952003)
chr1 (213-318)||(13350894-13350999)
chr1 (315-391)||(2996025-2996101)
chr1 (200-392)||(5855005-5855205)
chr1 (213-315)||(34490289-34490391)
chr1 (253-353)||(9929836-9929935)
chr1 (269-316)||(38244801-38244848)
chr1 (355-401)||(2569961-2570007)
chr1 (253-315)||(5831633-5831695)
chr1 (253-315)||(29167757-29167818)
chr1 (253-318)||(29677032-29677096)
chr1 (237-319)||(5855201-5855283)
chr1 (269-318)||(24708074-24708123)
chr1 (253-318)||(38952005-38952070)
chr1 (242-318)||(2570006-2570082)
chr1 (269-317)||(17227500-17227548)
chr1 (222-298)||(28499644-28499720)
[»] chr5 (21 HSPs)
chr5 (195-401)||(13312492-13312697)
chr5 (206-393)||(22169361-22169548)
chr5 (199-401)||(43461711-43461912)
chr5 (264-401)||(38521978-38522114)
chr5 (199-400)||(31189473-31189675)
chr5 (201-401)||(33958990-33959189)
chr5 (292-401)||(35922722-35922831)
chr5 (197-350)||(36169394-36169546)
chr5 (317-401)||(42034771-42034855)
chr5 (253-401)||(19621483-19621630)
chr5 (200-389)||(43262708-43262911)
chr5 (222-392)||(7156000-7156182)
chr5 (315-392)||(30704398-30704476)
chr5 (253-318)||(15221662-15221727)
chr5 (339-394)||(30045885-30045940)
chr5 (201-298)||(35922607-35922704)
chr5 (213-318)||(13312696-13312797)
chr5 (253-318)||(35922830-35922895)
chr5 (271-319)||(7156178-7156226)
chr5 (213-318)||(33958887-33958991)
chr5 (242-290)||(15221576-15221624)
[»] scaffold1126 (1 HSPs)
scaffold1126 (198-390)||(230-422)
[»] scaffold0251 (1 HSPs)
scaffold0251 (201-395)||(10631-10825)
[»] scaffold0126 (1 HSPs)
scaffold0126 (198-342)||(21549-21691)
[»] scaffold0123 (1 HSPs)
scaffold0123 (278-401)||(24031-24153)
[»] scaffold0043 (2 HSPs)
scaffold0043 (315-392)||(87035-87112)
scaffold0043 (200-318)||(86873-86991)
[»] scaffold0024 (1 HSPs)
scaffold0024 (315-392)||(112158-112235)
[»] scaffold0291 (1 HSPs)
scaffold0291 (315-392)||(5870-5947)
[»] scaffold0213 (2 HSPs)
scaffold0213 (254-317)||(24932-24995)
scaffold0213 (252-318)||(25350-25416)


Alignment Details
Target: chr2 (Bit Score: 189; Significance: 1e-102; HSPs: 12)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 193
Target Start/End: Complemental strand, 43900211 - 43900019
Alignment:
Q  1 tcctttttctgtttggattttaagatcttcagttgattgatatgaaaagctaaaactaagcttagactctcaacctttgccaatgtaaaaatgtatgaga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43900211 tcctttttctgtttggattttaagatcttcagttgattgatatgaaaagctaaaactaagcttagactctcaacctttgccaatgtaaaaatgtatgaga 43900112  T
Q  101 ttttgaaaaatgtgattattattaggcgactagtgataattagttatcaattcttctcgaaatttgactggaattatgatttaatattcttgg 193  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  43900111 ttttgaaaaatgtgattattattaggcgactagtgataattagttatcaattcttctcgaaatttgactggaattatgatttaatattgttgg 43900019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 190 - 401
Target Start/End: Original strand, 43900416 - 43900627
Alignment:
Q  190 ttggagcaaagaataaagattgatagacacccttaatgtgtagatcattttataccactctcgaaaatttcaggtaactaaatatatggtctgtgtgacc 289  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |    
T  43900416 ttggagcaaagaataaagattgatagacacttttaatgtgtagatcattttgtaccactctcgaaaatttcaggtaactaaatatatggtctgtgtgatc 43900515  T
Q  290 aaattttttcagttgtatgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatgcacgtgaccactattttttcatttagttaaccaaata 389  Q
    | |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  43900516 acattttttcagttgtgtgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatgcacgtgaccactatttttctatttagttaaccaaata 43900615  T
Q  390 aattctggaaaa 401  Q
    ||||||| ||||    
T  43900616 aattctgaaaaa 43900627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 200 - 400
Target Start/End: Complemental strand, 30906262 - 30906062
Alignment:
Q  200 gaataaagattgatagacacccttaatgtgtagatcattttataccactctcgaaaatttcaggtaactaaatatatggtctgtgtgaccaaattttttc 299  Q
    |||||||||| | || ||||| |||||||||| | | |||| |||||||||  |||||||||| |||| |||||||||||||| |||||||   ||||||    
T  30906262 gaataaagatgggtacacacctttaatgtgtacacccttttgtaccactctgaaaaatttcagttaaccaaatatatggtctgcgtgaccaccatttttc 30906163  T
Q  300 agttgtatgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatgcacgtgaccactattttttcatttagttaaccaaataaattctggaa 399  Q
    ||||   ||||||||||||| | ||||||||||||||||||||||||||||||| |||||||||||||||| || |||||||| |||||||||| |||||    
T  30906162 agtttcgtgaccactatttaaatgctgaaaaatgtggtcacgcaactaaaatgcgcgtgaccactatttttccacttagttaagcaaataaattatggaa 30906063  T
Q  400 a 400  Q
    |    
T  30906062 a 30906062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 200 - 395
Target Start/End: Original strand, 45305865 - 45306059
Alignment:
Q  200 gaataaagattgatagacacccttaatgtgtagatcattttataccactctcgaaaatttcaggtaactaaatatatggtctgtgtgaccaaattttttc 299  Q
    |||||||||| |||  ||||||||||| |||| |    ||| |||||||||  |||||||||| |||  |||||||| |||||| |||||| ||||||||    
T  45305865 gaataaagatagatttacacccttaatatgtacactcctttgtaccactctaaaaaatttcagttaatcaaatatatagtctgtatgaccatattttttc 45305964  T
Q  300 agttgtatgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatgcacgtgaccactattttttcatttagttaaccaaataaattct 395  Q
    |||||  ||||||| ||||| |||||||||||||||| |||||||||||||||  |||||||||||||||| || |||||||||| ||||||||||    
T  45305965 agttgcgtgaccac-atttaaaagctgaaaaatgtggccacgcaactaaaatgtgcgtgaccactatttttccacttagttaaccgaataaattct 45306059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 281 - 401
Target Start/End: Complemental strand, 1400903 - 1400784
Alignment:
Q  281 tgtgtgaccaaattttttcagttgtatgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatgcacgtgaccactattttttcatttagtt 380  Q
    |||||||||| |||||| ||||||  |||||||||||||||||||||||||||||||||| |||| ||||||| ||||| |||||||||| || ||||||    
T  1400903 tgtgtgaccacattttt-cagttgcgtgaccactatttagaagctgaaaaatgtggtcacacaacaaaaatgcgcgtgatcactatttttccacttagtt 1400805  T
Q  381 aaccaaataaattctggaaaa 401  Q
    ||||||||||||| |||||||    
T  1400804 aaccaaataaattatggaaaa 1400784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 302 - 401
Target Start/End: Original strand, 33667316 - 33667414
Alignment:
Q  302 ttgtatgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatgcacgtgaccactattttttcatttagttaaccaaataaattctggaaaa 401  Q
    |||||||||||| ||||||||| |||||||||||||||||||| |||||||  ||| |||||||||||| || ||||||||||||||| |||||| ||||    
T  33667316 ttgtatgaccac-atttagaagttgaaaaatgtggtcacgcaattaaaatgtgcgtaaccactatttttccacttagttaaccaaatatattctgaaaaa 33667414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 292 - 401
Target Start/End: Complemental strand, 28527441 - 28527333
Alignment:
Q  292 attttttcagttgtatgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatgcacgtgaccactattttttcatttagttaaccaaataaa 391  Q
    ||||||| |||||  ||||||  |||||||||||| ||||||| |||||| |||||| ||||  ||||||||||||||| || |||||||||||||||||    
T  28527441 atttttttagttgcgtgaccataatttagaagctggaaaatgttgtcacg-aactaacatgcgtgtgaccactatttttccaattagttaaccaaataaa 28527343  T
Q  392 ttctggaaaa 401  Q
    ||||||||||    
T  28527342 ttctggaaaa 28527333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 253 - 385
Target Start/End: Complemental strand, 7378625 - 7378495
Alignment:
Q  253 aaaatttcaggtaactaaatatatggtctgtgtgaccaaattttttcagttgtatgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatg 352  Q
    |||||||||| |||| ||||||||||| |||||||||| |||||||||||||  | ||||| ||||||||||| |||||| |||| ||||||||||||||    
T  7378625 aaaatttcagttaacaaaatatatggtttgtgtgaccatattttttcagttgcgtaaccac-atttagaagct-aaaaatatggtgacgcaactaaaatg 7378528  T
Q  353 cacgtgaccactattttttcatttagttaacca 385  Q
       |||||||||||| || || ||| |||||||    
T  7378527 tgtgtgaccactattattccacttaattaacca 7378495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 213 - 318
Target Start/End: Original strand, 1400680 - 1400785
Alignment:
Q  213 tagacacccttaatgtgtagatcattttataccactctcgaaaatttcaggtaactaaatatatggtctgtgtgaccaaattttttcagttgtatgacca 312  Q
    ||||||||||||||||||| | | |||| ||||| |||  |||||||||| |||| ||||||||||| |||||||||| ||||||| |||||  ||||||    
T  1400680 tagacacccttaatgtgtacacccttttgtaccaatctgaaaaatttcagttaaccaaatatatggtatgtgtgaccacattttttaagttgcgtgacca 1400779  T
Q  313 ctattt 318  Q
    ||||||    
T  1400780 ctattt 1400785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 253 - 318
Target Start/End: Original strand, 28527269 - 28527334
Alignment:
Q  253 aaaatttcaggtaactaaatatatggtctgtgtgaccaaattttttcagttgtatgaccactattt 318  Q
    |||||||||| |||| |||||||||||||||||||||| ||||||| |||||  ||||||||||||    
T  28527269 aaaatttcagctaaccaaatatatggtctgtgtgaccacatttttttagttgcgtgaccactattt 28527334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 312
Target Start/End: Complemental strand, 41212507 - 41212411
Alignment:
Q  215 gacacccttaatgtgtagatcattttataccactctcgaaaatttcaggtaactaaatatatggtctgtgtgaccaaattttttcagttgtatgacca 312  Q
    |||||||||||| |||| | |  ||| |||||||||  ||||||| || |||| |||||||||||||||||||||| ||||||| |||||| ||||||    
T  41212507 gacacccttaatatgtatacccctttgtaccactctgaaaaatttaagttaaccaaatatatggtctgtgtgaccacatttttt-agttgtgtgacca 41212411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 215 - 318
Target Start/End: Complemental strand, 33667516 - 33667413
Alignment:
Q  215 gacacccttaatgtgtagatcattttataccactctcgaaaatttcaggtaactaaatatatggtctgtgtgaccaaattttttcagttgtatgaccact 314  Q
    |||||||||||| |||| |   |||| |||||||||  ||||||| || |||| ||||||||||| ||| ||| || ||||||| |||||  ||||||||    
T  33667516 gacacccttaatatgtacactcttttgtaccactctgaaaaattttagttaaccaaatatatggtatgtatgaacacattttttaagttgcgtgaccact 33667417  T
Q  315 attt 318  Q
    ||||    
T  33667416 attt 33667413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 124; Significance: 1e-63; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 198 - 401
Target Start/End: Original strand, 20556662 - 20556865
Alignment:
Q  198 aagaataaagattgatagacacccttaatgtgtagatcattttataccactctcgaaaatttcaggtaactaaatatatggtctgtgtgaccaaattttt 297  Q
    |||||||||||| | ||||||||||||||||||| |||  ||| |   ||||||||||||||||| |||| |||||||||||| ||||||||| ||||||    
T  20556662 aagaataaagatcggtagacacccttaatgtgtatatctctttgtgttactctcgaaaatttcagttaaccaaatatatggtcggtgtgaccatattttt 20556761  T
Q  298 tcagttgtatgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatgcacgtgaccactattttttcatttagttaaccaaataaattctgg 397  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||| | |||||||| ||||||| || ||||||||||||||||||||||     
T  20556762 tcagttgtgtgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatacgcgtgaccaatatttttccacttagttaaccaaataaattctga 20556861  T
Q  398 aaaa 401  Q
    ||||    
T  20556862 aaaa 20556865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 200 - 400
Target Start/End: Original strand, 31303351 - 31303551
Alignment:
Q  200 gaataaagattgatagacacccttaatgtgtagatcattttataccactctcgaaaatttcaggtaactaaatatatggtctgtgtgaccaaattttttc 299  Q
    |||||||||||| ||||||||||||||||||| |||  ||| || ||||||  ||||||||||  ||| ||||| |||||||| ||||||| ||||||||    
T  31303351 gaataaagattggtagacacccttaatgtgtacatccatttgtatcactctgaaaaatttcagtcaaccaaatacatggtctgcgtgaccacattttttc 31303450  T
Q  300 agttgtatgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatgcacgtgaccactattttttcatttagttaaccaaataaattctggaa 399  Q
    | |||  ||||||||||||||||||||||||||||||||| ||||||||||||  |||||||||||||||| || |||||||||||||||||||||||||    
T  31303451 aattgcgtgaccactatttagaagctgaaaaatgtggtcatgcaactaaaatgtgcgtgaccactatttttccacttagttaaccaaataaattctggaa 31303550  T
Q  400 a 400  Q
    |    
T  31303551 a 31303551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 197 - 401
Target Start/End: Original strand, 18312722 - 18312925
Alignment:
Q  197 aaagaataaagattgatagacacccttaatgtgtagatcattttataccactctcgaaaatttcaggtaactaaatatatggtctgtgtgaccaaatttt 296  Q
    ||||||||||||||| ||||||||||||| ||||| | |  ||| ||||||||||||||||||||  |||  ||||||||||||| |||||||| || ||    
T  18312722 aaagaataaagattggtagacacccttaacgtgtatacccctttgtaccactctcgaaaatttcaattaatcaaatatatggtctctgtgaccacatatt 18312821  T
Q  297 ttcagttgtatgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatgcacgtgaccactattttttcatttagttaaccaaataaattctg 396  Q
    ||||||||  | || ||||||||||||||| |||||||| |||||||||||||||||| ||||||||||||||| || |||||||||| ||||||||||     
T  18312822 ttcagttgcgtcactactatttagaagctg-aaaatgtgctcacgcaactaaaatgcatgtgaccactatttttccacttagttaacctaataaattctt 18312920  T
Q  397 gaaaa 401  Q
    |||||    
T  18312921 gaaaa 18312925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 242 - 401
Target Start/End: Original strand, 21548393 - 21548551
Alignment:
Q  242 taccactctcgaaaatttcaggtaactaaatatatggtctgtgtgaccaaattttttcagttgtatgaccactatttagaagctgaaaaatgtggtcacg 341  Q
    ||||||||| ||||||||||| |||  ||| ||||||| |||||||||| |||||||||||||| |||||| |||||| |||||||||||||||||||||    
T  21548393 taccactcttgaaaatttcagttaatcaaa-atatggtatgtgtgaccatattttttcagttgtgtgaccaatatttaaaagctgaaaaatgtggtcacg 21548491  T
Q  342 caactaaaatgcacgtgaccactattttttcatttagttaaccaaataaattctggaaaa 401  Q
    |||||  ||||| ||| |||||| ||||| || |||||||||||||||||||||||||||    
T  21548492 caactcgaatgcgcgtaaccactgtttttccacttagttaaccaaataaattctggaaaa 21548551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 269 - 401
Target Start/End: Original strand, 21589590 - 21589722
Alignment:
Q  269 aaatatatggtctgtgtgaccaaattttttcagttgtatgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatgcacgtgaccactattt 368  Q
    |||||||| |||| |||||||| |||||||||||||| ||| ||||||||||||||||||||||||||||| |||||||||||||  |||||||||||||    
T  21589590 aaatatattgtctatgtgaccatattttttcagttgtgtgatcactatttagaagctgaaaaatgtggtcatgcaactaaaatgcgtgtgaccactattt 21589689  T
Q  369 tttcatttagttaaccaaataaattctggaaaa 401  Q
    || || ||| |||| ||||||| ||||||||||    
T  21589690 ttccacttaattaatcaaataagttctggaaaa 21589722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 264 - 401
Target Start/End: Original strand, 4290789 - 4290925
Alignment:
Q  264 taactaaatatatggtctgtgtgaccaaattttttcagttgtatgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatgcacgtgaccac 363  Q
    |||||| ||||||||| | | |||||| |||||||||||||  ||||||||||||||||| |||||||||||||||||||||| || ||  |||||||||    
T  4290789 taactagatatatggtttatctgaccacattttttcagttgagtgaccactatttagaagttgaaaaatgtggtcacgcaact-aagtgtgcgtgaccac 4290887  T
Q  364 tattttttcatttagttaaccaaataaattctggaaaa 401  Q
    ||||||| || |||||||||||||||||||||| ||||    
T  4290888 tatttttccacttagttaaccaaataaattctgaaaaa 4290925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 200 - 392
Target Start/End: Original strand, 32964651 - 32964852
Alignment:
Q  200 gaataaagattgatagacacccttaatgtgtagatcattttataccactctcgaaaatttcaggtaactaaatatatggtctgtgtgaccaaattttttc 299  Q
    |||||||||||| |||||| |||||||||||| ||   |||| ||||||||  | ||||| || |||||||||||||||| |||||||||| |||||| |    
T  32964651 gaataaagattggtagacatccttaatgtgtacattcatttacaccactctaaagaatttaagttaactaaatatatggtatgtgtgaccatattttt-c 32964749  T
Q  300 agttgtatgaccactattt----------agaagctgaaaaatgtggtcacgcaactaaaatgcacgtgaccactattttttcatttagttaaccaaata 389  Q
    | |||| ||||||||||||          |||||||||||||| |||||| | |||||||||||||||||||||||||||| || ||| |||||| ||||    
T  32964750 aattgtgtgaccactattttccagcatttagaagctgaaaaatatggtcatgtaactaaaatgcacgtgaccactatttttccacttaattaacctaata 32964849  T
Q  390 aat 392  Q
    |||    
T  32964850 aat 32964852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 252 - 401
Target Start/End: Complemental strand, 22740818 - 22740669
Alignment:
Q  252 gaaaatttcaggtaactaaatatatggtctgtgtgaccaaatttttt-cagttgtatgaccactatttagaagctgaaaaatgtggtcacgcaactaaaa 350  Q
    ||||||||||  ||||||||||||| || ||||| |||| ||||||| ||||||| |||||| |||||| |||||||||||| |||||||||||||||||    
T  22740818 gaaaatttcaattaactaaatatatagtttgtgtaaccacatttttttcagttgtgtgacca-tatttaaaagctgaaaaatatggtcacgcaactaaaa 22740720  T
Q  351 tgcacgtgaccactattttttcatttagttaaccaaataaattctggaaaa 401  Q
    |   ||||| || ||||||| || |||||||||||||||||||||| ||||    
T  22740719 tatgcgtgatcattatttttccacttagttaaccaaataaattctgaaaaa 22740669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 248 - 401
Target Start/End: Complemental strand, 5083954 - 5083802
Alignment:
Q  248 tctcgaaaatttcaggtaactaaatatatggtctgtgtgaccaaattttttcagttgtatgaccactatttagaagctgaaaaatgtggtcacgcaacta 347  Q
    ||||||||||||||  | |  ||||||||||| |||||||||| ||||||||| |||  ||||||||||||||||| |||||||| |||||||||||||     
T  5083954 tctcgaaaatttcaattcatcaaatatatggtatgtgtgaccacattttttcaattgcgtgaccactatttagaagttgaaaaatatggtcacgcaact- 5083856  T
Q  348 aaatgcacgtgaccactattttttcatttagttaaccaaataaattctggaaaa 401  Q
    ||||||  |||||||||||||||  | || |||||| ||||||||||| |||||    
T  5083855 aaatgcgggtgaccactatttttcaactttgttaacgaaataaattctagaaaa 5083802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 242 - 349
Target Start/End: Complemental strand, 15958483 - 15958378
Alignment:
Q  242 taccactctcgaaaatttcaggtaactaaatatatggtctgtgtgaccaaattttttcagttgtatgaccactatttagaagctgaaaaatgtggtcacg 341  Q
    |||||||||  |||||||||| ||||||||||||||||||||||||||| | ||||| ||||| |||| |||||||||||||||||||||||||||||||    
T  15958483 taccactctgtaaaatttcagttaactaaatatatggtctgtgtgaccaca-tttttaagttgcatga-cactatttagaagctgaaaaatgtggtcacg 15958386  T
Q  342 caactaaa 349  Q
    ||| ||||    
T  15958385 caattaaa 15958378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 216 - 318
Target Start/End: Complemental strand, 21589823 - 21589721
Alignment:
Q  216 acacccttaatgtgtagatcattttataccactctcgaaaatttcaggtaactaaatatatggtctgtgtgaccaaattttttcagttgtatgaccacta 315  Q
    |||||||||||||||| |||  |||||||||||||  |||||||||| || | |||||||||||||||||||||| ||||||| ||||| ||||||||||    
T  21589823 acacccttaatgtgtacatccgtttataccactctaaaaaatttcagttatccaaatatatggtctgtgtgaccacatttttttagttgcatgaccacta 21589724  T
Q  316 ttt 318  Q
    |||    
T  21589723 ttt 21589721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 311 - 400
Target Start/End: Complemental strand, 28805089 - 28805001
Alignment:
Q  311 cactatttagaagctgaaaaatgtggtcacgcaactaaaatgcacgtgaccactattttttcatttagttaaccaaataaattctggaaa 400  Q
    |||||||||||||||||||||||||||||| |||| ||||||| || ||||||||||||| || ||||||||||||||||||| ||||||    
T  28805089 cactatttagaagctgaaaaatgtggtcacacaaccaaaatgcgcg-gaccactatttttccacttagttaaccaaataaattatggaaa 28805001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 199 - 304
Target Start/End: Complemental strand, 28805235 - 28805130
Alignment:
Q  199 agaataaagattgatagacacccttaatgtgtagatcattttataccactctcgaaaatttcaggtaactaaatatatggtctgtgtgaccaaatttttt 298  Q
    ||||||||||||| ||||||||||||||||||| | |  ||| || ||||||  ||||||| || |||| ||||||||||| |||||||||| |||||||    
T  28805235 agaataaagattggtagacacccttaatgtgtatacccctttgtatcactctgaaaaatttaagttaaccaaatatatggtatgtgtgaccacatttttt 28805136  T
Q  299 cagttg 304  Q
    ||||||    
T  28805135 cagttg 28805130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 315 - 392
Target Start/End: Complemental strand, 46943839 - 46943761
Alignment:
Q  315 atttagaagctgaaaaatgtggtcacgcaactaaaatgcacgtgaccactatt--ttttcatttagttaaccaaataaat 392  Q
    |||||||||||||||| |||| ||||||||||||||||| |||||||||||||  |||||| ||||||||||||||||||    
T  46943839 atttagaagctgaaaa-tgtgatcacgcaactaaaatgcgcgtgaccactattttttttcacttagttaaccaaataaat 46943761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 207 - 316
Target Start/End: Complemental strand, 31303661 - 31303553
Alignment:
Q  207 gattgatagacacccttaatgtgtagatcattttataccactctcgaaaatttcaggtaactaaatatatggtctgtgtgaccaaattttttcagttgta 306  Q
    ||||| |||||||| ||||||| || ||| |||||||||||||   |||||||||| |||| ||||||||||| |||||||||| ||||||| |||||      
T  31303661 gattggtagacacctttaatgtctacatccttttataccactcaaaaaaatttcagttaacaaaatatatggtatgtgtgaccacatttttt-agttgcg 31303563  T
Q  307 tgaccactat 316  Q
    ||||||||||    
T  31303562 tgaccactat 31303553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 213 - 298
Target Start/End: Original strand, 28804893 - 28804978
Alignment:
Q  213 tagacacccttaatgtgtagatcattttataccactctcgaaaatttcaggtaactaaatatatggtctgtgtgaccaaatttttt 298  Q
    |||||||||||||| |||| | | |||| ||||| ||| ||||||||||| |||| ||||||||||||| |||||||| |||||||    
T  28804893 tagacacccttaatatgtacacccttttgtaccattctagaaaatttcagttaaccaaatatatggtctatgtgaccacatttttt 28804978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 308 - 350
Target Start/End: Complemental strand, 2887230 - 2887188
Alignment:
Q  308 gaccactatttagaagctgaaaaatgtggtcacgcaactaaaa 350  Q
    |||||||||||||||||||||||||||||| ||||||||||||    
T  2887230 gaccactatttagaagctgaaaaatgtggttacgcaactaaaa 2887188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 213 - 319
Target Start/End: Complemental strand, 32964954 - 32964848
Alignment:
Q  213 tagacacccttaatgtgtagatcattttataccactctcgaaaatttcaggtaactaaatatatggtctgtgtgaccaaattttttcagttgtatgacca 312  Q
    |||||||| ||||||| || | | |||| || ||||||  ||||||| || |||||| |||||||||||||||||||| || |||| |||||  ||||||    
T  32964954 tagacacctttaatgtatacacccttttgtatcactctaaaaaatttaagttaactatatatatggtctgtgtgaccacatatttttagttgcgtgacca 32964855  T
Q  313 ctattta 319  Q
    |||||||    
T  32964854 ctattta 32964848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 253 - 318
Target Start/End: Original strand, 15958259 - 15958324
Alignment:
Q  253 aaaatttcaggtaactaaatatatggtctgtgtgaccaaattttttcagttgtatgaccactattt 318  Q
    ||||||| || |||| |||||||||||| ||||||||| ||||||| |||||| ||||||||||||    
T  15958259 aaaatttaagttaaccaaatatatggtcagtgtgaccacatttttttagttgtgtgaccactattt 15958324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 253 - 318
Target Start/End: Complemental strand, 21548615 - 21548550
Alignment:
Q  253 aaaatttcaggtaactaaatatatggtctgtgtgaccaaattttttcagttgtatgaccactattt 318  Q
    |||||||||| |||||||||||||||||||||||| || |||| || |||||  ||||||||||||    
T  21548615 aaaatttcagttaactaaatatatggtctgtgtgatcatatttgtttagttgcgtgaccactattt 21548550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 253 - 318
Target Start/End: Complemental strand, 22033223 - 22033158
Alignment:
Q  253 aaaatttcaggtaactaaatatatggtctgtgtgaccaaattttttcagttgtatgaccactattt 318  Q
    ||||||| || |||| |||||||||||||||||||||| ||||||| |||||  ||||||||||||    
T  22033223 aaaattttagttaaccaaatatatggtctgtgtgaccatattttttgagttgcgtgaccactattt 22033158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 242 - 318
Target Start/End: Complemental strand, 18313000 - 18312924
Alignment:
Q  242 taccactctcgaaaatttcaggtaactaaatatatggtctgtgtgaccaaattttttcagttgtatgaccactattt 318  Q
    |||||||||  |||||||||| |||| ||||||||||| |||||| | ||||||||| |||||  ||||||||||||    
T  18313000 taccactctgaaaaatttcagctaaccaaatatatggtttgtgtggctaaatttttttagttgcgtgaccactattt 18312924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 346 - 401
Target Start/End: Original strand, 5174910 - 5174965
Alignment:
Q  346 taaaatgcacgtgaccactattttttcatttagttaaccaaataaattctggaaaa 401  Q
    |||||||  |||||||||||||||| || |||||||| ||||||||||||| ||||    
T  5174910 taaaatgtgcgtgaccactatttttacacttagttaatcaaataaattctgaaaaa 5174965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 315 - 401
Target Start/End: Complemental strand, 27523583 - 27523497
Alignment:
Q  315 atttagaagctgaaaaatgtggtcacgcaactaaaatgcacgtgaccactattttttcatttagttaaccaaataaattctggaaaa 401  Q
    |||||||| ||||||||  ||||||  ||| |||||||  | |||| ||||||||| || ||| |||||||||||||||||| ||||    
T  27523583 atttagaaactgaaaaacatggtcatacaattaaaatgtgcttgactactatttttccacttaattaaccaaataaattctgaaaaa 27523497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 300
Target Start/End: Original strand, 5174792 - 5174893
Alignment:
Q  199 agaataaagattgatagacacccttaatgtgtagatcattttataccactctcgaaaatttcaggtaactaaatatatggtctgtgtgaccaaatttttt 298  Q
    |||||||||||  ||| |||  ||||||||||| |||  ||| |||||| |||||||||||||| |||  | ||||||||| ||||| | || |||||||    
T  5174792 agaataaagatcaataaacattcttaatgtgtacatctctttgtaccacgctcgaaaatttcagttaatcatatatatggtttgtgtaatcacatttttt 5174891  T
Q  299 ca 300  Q
    ||    
T  5174892 ca 5174893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 318
Target Start/End: Complemental strand, 20556928 - 20556867
Alignment:
Q  257 tttcaggtaactaaatatatggtctgtgtgaccaaattttttcagttgtatgaccactattt 318  Q
    |||||| ||||||||||||| |||||| |||||| |||||||  ||||  ||||||||||||    
T  20556928 tttcagttaactaaatatatagtctgtttgaccacatttttttggttgagtgaccactattt 20556867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 298
Target Start/End: Original strand, 22032980 - 22033056
Alignment:
Q  221 cttaatgtgtagatcattttataccactctcgaaaatttcaggtaactaaatatatggtctgtgtgaccaaatttttt 298  Q
    ||||||||||| ||| |||  |||||||||  ||||||| || |||| ||||||||||| |||||||||| |||||||    
T  22032980 cttaatgtgtacatcctttg-taccactctttaaaatttaagttaaccaaatatatggtatgtgtgaccacatttttt 22033056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 111; Significance: 6e-56; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 198 - 400
Target Start/End: Complemental strand, 38607041 - 38606839
Alignment:
Q  198 aagaataaagattgatagacacccttaatgtgtagatcattttataccactctcgaaaatttcaggtaactaaatatatggtctgtgtgaccaaattttt 297  Q
    ||||||||| |||| |||||| |||||||||||| | |  ||| ||| |||||| |||||||||| |||||| ||||||||| || ||||||| ||||||    
T  38607041 aagaataaatattggtagacatccttaatgtgtacacccctttgtacaactctccaaaatttcagttaactacatatatggtttgcgtgaccacattttt 38606942  T
Q  298 tcagttgtatgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatgcacgtgaccactattttttcatttagttaaccaaataaattctgg 397  Q
    |||||||  | ||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||| || |||||||||||||||||||||||    
T  38606941 tcagttgcgttaccactatttagaagctgaaaaatgtggtcacgcaacgaaaatgcgtgtgaccactatttttccacttagttaaccaaataaattctgg 38606842  T
Q  398 aaa 400  Q
    |||    
T  38606841 aaa 38606839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 197 - 401
Target Start/End: Complemental strand, 1251690 - 1251487
Alignment:
Q  197 aaagaataaagattgatagacacccttaatgtgtagatcattttataccactctcgaaaatttcaggtaactaaatatatggtctgtgtgaccaaatttt 296  Q
    ||||||||||||||| |||||| |||||||||||| | |  ||| ||||||||||||||||||||| |||||||||||||| | |||| ||||| |||||    
T  1251690 aaagaataaagattggtagacatccttaatgtgtacacccatttgtaccactctcgaaaatttcagttaactaaatatatgatttgtgagaccacatttt 1251591  T
Q  297 ttcagttgtatgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatgcacgtgaccactattttttcatttagttaaccaaataaattctg 396  Q
    ||||||||  ||||||||||||| || |||||||||||| ||| | ||||||||||  || ||||||||||||  || ||||||||||||||||||| ||    
T  1251590 ttcagttgcgtgaccactatttaaaacctgaaaaatgtgatcatg-aactaaaatgtgcgcgaccactattttcccacttagttaaccaaataaattatg 1251492  T
Q  397 gaaaa 401  Q
    |||||    
T  1251491 gaaaa 1251487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 199 - 395
Target Start/End: Complemental strand, 31273774 - 31273578
Alignment:
Q  199 agaataaagattgatagacacccttaatgtgtagatcattttataccactctcgaaaatttcaggtaactaaatatatggtctgtgtgaccaaatttttt 298  Q
    ||||||||||||| |||| || ||||||||||| | | |||| ||||||||||||||||||||  |||  ||||||||||||| |||| ||| || ||||    
T  31273774 agaataaagattggtagatactcttaatgtgtatacctttttgtaccactctcgaaaatttcaattaatcaaatatatggtctatgtggccacatgtttt 31273675  T
Q  299 cagttgtatgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatgcacgtgaccactattttttcatttagttaaccaaataaattct 395  Q
    ||||||  ||||| |||||||||||||||||||| |||||| ||| ||||||||||||||| | ||||||||||| | |||||||||||||||||||    
T  31273674 cagttgcgtgacccctatttagaagctgaaaaatatggtcatgcagctaaaatgcacgtgaacgctattttttcactaagttaaccaaataaattct 31273578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 245 - 390
Target Start/End: Complemental strand, 29367221 - 29367076
Alignment:
Q  245 cactctcgaaaatttcaggtaactaaatatatggtctgtgtgaccaaattttttcagttgtatgaccactatttagaagctgaaaaatgtggtcacgcaa 344  Q
    |||||| |||||||| |  |||||||||||||||||| ||| |||| ||||||||| |||| |||||||||||| |||||||||||||||||||||||||    
T  29367221 cactcttgaaaattttaattaactaaatatatggtctatgtaaccatattttttcaattgtgtgaccactattttgaagctgaaaaatgtggtcacgcaa 29367122  T
Q  345 ctaaaatgcacgtgaccactattttttcatttagttaaccaaataa 390  Q
    ||||||||| |||||||||||||||| || ||||||||||||||||    
T  29367121 ctaaaatgcgcgtgaccactatttttccacttagttaaccaaataa 29367076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 245 - 395
Target Start/End: Complemental strand, 5322128 - 5321978
Alignment:
Q  245 cactctcgaaaatttcaggtaactaaatatatggtctgtgtgaccaaattttttcagttgtatgaccactatttagaagctgaaaaatgtggtcacgcaa 344  Q
    ||||||| |||||||||  |||| ||||||||||||||||||| || ||||||||| |||  ||| || ||||||||||||||||||| || ||||||||    
T  5322128 cactctcaaaaatttcaattaaccaaatatatggtctgtgtgatcacattttttcaattgcgtgatcattatttagaagctgaaaaatatgatcacgcaa 5322029  T
Q  345 ctaaaatgcacgtgaccactattttttcatttagttaaccaaataaattct 395  Q
    ||||||||| |||||||||||||||| || |||||||||||||||||||||    
T  5322028 ctaaaatgcgcgtgaccactatttttccacttagttaaccaaataaattct 5321978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 259 - 393
Target Start/End: Complemental strand, 15714847 - 15714713
Alignment:
Q  259 tcaggtaactaaatatatggtctgtgtgaccaaattttttcagttgtatgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatgcacgtg 358  Q
    |||| |||||||||||||||||||||| |||| |||||||||| ||| |||| |||||||| |||||||||||| |||||||| ||||||||||  ||||    
T  15714847 tcagttaactaaatatatggtctgtgtaaccacattttttcagctgtgtgactactatttaaaagctgaaaaatatggtcacgtaactaaaatgtccgtg 15714748  T
Q  359 accactattttttcatttagttaaccaaataaatt 393  Q
    |||||||||||| || |||||||||||||||||||    
T  15714747 accactatttttccacttagttaaccaaataaatt 15714713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 248 - 393
Target Start/End: Original strand, 5573726 - 5573871
Alignment:
Q  248 tctcgaaaatttcaggtaactaaatatatggtctgtgtgaccaaattttttcagttgtatgaccactatttagaagctgaaaaatgtggtcacgcaacta 347  Q
    ||||||| ||||||| |||| ||||||||| | | |||||| | ||||||||| |||  ||||||||||||||||| ||||||||||||||| | |||||    
T  5573726 tctcgaacatttcagttaaccaaatatatgatatatgtgactacattttttcaattgcgtgaccactatttagaagttgaaaaatgtggtcatggaacta 5573825  T
Q  348 aaatgcacgtgaccactattttttcatttagttaaccaaataaatt 393  Q
    ||||||||||||||||||||||| || |||||||||||||||||||    
T  5573826 aaatgcacgtgaccactatttttccacttagttaaccaaataaatt 5573871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 270 - 401
Target Start/End: Complemental strand, 1241041 - 1240911
Alignment:
Q  270 aatatatggtctgtgtgaccaaattttttcagttgtatgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatgcacgtgaccactatttt 369  Q
    |||||||||| |||| ||||| |||||||||||||| ||||||||||||||||||||||||||||||||| | ||||||||||  |||||||||||||||    
T  1241041 aatatatggtgtgtgagaccatattttttcagttgtgtgaccactatttagaagctgaaaaatgtggtcatg-aactaaaatgtgcgtgaccactatttt 1240943  T
Q  370 ttcatttagttaaccaaataaattctggaaaa 401  Q
      || ||||||||||||||||||| |||||||    
T  1240942 cccacttagttaaccaaataaattatggaaaa 1240911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 253 - 401
Target Start/End: Complemental strand, 26493492 - 26493347
Alignment:
Q  253 aaaatttcaggtaactaaatatatggtctgtgtgaccaaattttttcagttgtatgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatg 352  Q
    |||||||||  |||| ||||||||  | ||||||| || |||||||||||||| | || ||||||||||||||||||||||||||||||||||| |||||    
T  26493492 aaaatttcaattaaccaaatatat--tttgtgtgatcacattttttcagttgtgtaactactatttagaagctgaaaaatgtggtcacgcaact-aaatg 26493396  T
Q  353 cacgtgaccactattttttcatttagttaaccaaataaattctggaaaa 401  Q
    | |||||| ||||||||| ||||||||||| ||||||||||||| ||||    
T  26493395 cgcgtgacaactatttttccatttagttaatcaaataaattctgaaaaa 26493347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 200 - 401
Target Start/End: Original strand, 31596693 - 31596893
Alignment:
Q  200 gaataaagattgatagacacccttaatgtgtagatcattttataccactctcgaaaatttcaggtaactaaatatatggtctgtgtgaccaaattttttc 299  Q
    |||||||||||| ||||||| |||||| |||| | |  ||| ||||||| |  |||||| ||| |||  ||||||||||| |||||||||| ||||||||    
T  31596693 gaataaagattggtagacactcttaatatgtacacctctttgtaccactttgaaaaattacagttaatcaaatatatggtatgtgtgaccacattttttc 31596792  T
Q  300 agttgtatgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatgcacgtgaccactattttttcatttagttaaccaaataaattctggaa 399  Q
    |||||  | ||||||||||||||| |||||||||||||||  ||||| ||||||  || | |||||||||| || ||| ||||||||||||||| |||||    
T  31596793 agttgcgttaccactatttagaagatgaaaaatgtggtcagacaact-aaatgcgtgtaatcactatttttccacttaattaaccaaataaattatggaa 31596891  T
Q  400 aa 401  Q
    ||    
T  31596892 aa 31596893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 197 - 348
Target Start/End: Original strand, 33286112 - 33286263
Alignment:
Q  197 aaagaataaagattgatagacacccttaatgtgtagatcattttataccactctcgaaaatttcaggtaactaaatatatggtctgtgtgaccaaatttt 296  Q
    ||||||||||||||| | ||||||||||||||||| | |  ||| |||| ||||  |||| || |  |||| |||||||||||||| ||||||| |||||    
T  33286112 aaagaataaagattggtggacacccttaatgtgtacacccatttgtacccctctaaaaaaatttaattaaccaaatatatggtctgcgtgaccacatttt 33286211  T
Q  297 ttcagttgtatgaccactatttagaagctgaaaaatgtggtcacgcaactaa 348  Q
    |||| |||  |||||||| |||||||||||||||||||||||||||||||||    
T  33286212 ttcaattgcgtgaccactttttagaagctgaaaaatgtggtcacgcaactaa 33286263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 315 - 392
Target Start/End: Original strand, 15233241 - 15233318
Alignment:
Q  315 atttagaagctgaaaaatgtggtcacgcaactaaaatgcacgtgaccactattttttcatttagttaaccaaataaat 392  Q
    ||||| ||| ||||||| ||||||||||||||||||||| | ||||||||||||||||| ||| ||||||||||||||    
T  15233241 atttaaaagttgaaaaacgtggtcacgcaactaaaatgcgcatgaccactattttttcacttaattaaccaaataaat 15233318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 201 - 290
Target Start/End: Complemental strand, 24576270 - 24576181
Alignment:
Q  201 aataaagattgatagacacccttaatgtgtagatcattttataccactctcgaaaatttcaggtaactaaatatatggtctgtgtgacca 290  Q
    ||||||||||| ||||||||| ||||||||| | |  ||| ||||||||||||||||||||  |||| ||||||||||||||||||||||    
T  24576270 aataaagattggtagacacccgtaatgtgtacacccctttgtaccactctcgaaaatttcaattaaccaaatatatggtctgtgtgacca 24576181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 311 - 393
Target Start/End: Original strand, 6809804 - 6809886
Alignment:
Q  311 cactatttagaagctgaaaaatgtggtcacgcaactaaaatgcacgtgaccactattttttcatttagttaaccaaataaatt 393  Q
    ||||||||| ||| | ||||||||||| || | |||||||| || ||||||||||||||| |||||| |||||||||||||||    
T  6809804 cactatttaaaagataaaaaatgtggttactcgactaaaatacatgtgaccactatttttccatttaattaaccaaataaatt 6809886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 213 - 316
Target Start/End: Original strand, 38606734 - 38606837
Alignment:
Q  213 tagacacccttaatgtgtagatcattttataccactctcgaaaatttcaggtaactaaatatatggtctgtgtgaccaaattttttcagttgtatgacca 312  Q
    |||||| ||||||| | |||| |  ||| |||||||||  |||||||||| |||||||||||||||| |||||||||| ||||||| || ||  ||||||    
T  38606734 tagacatccttaatctttagacccctttgtaccactctgaaaaatttcagttaactaaatatatggtatgtgtgaccatatttttttagctgcgtgacca 38606833  T
Q  313 ctat 316  Q
    ||||    
T  38606834 ctat 38606837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 356 - 401
Target Start/End: Complemental strand, 24575962 - 24575917
Alignment:
Q  356 gtgaccactattttttcatttagttaaccaaataaattctggaaaa 401  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||    
T  24575962 gtgaccactattttttcacttatttaaccaaataaattctggaaaa 24575917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 264 - 377
Target Start/End: Original strand, 32959522 - 32959635
Alignment:
Q  264 taactaaatatatggtctgtgtgaccaaattttttcagttgtatgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatgcacgtgaccac 363  Q
    |||| ||||| ||| | ||||||| || ||||||||| ||   ||||||| ||| ||||||| |||||| ||||||| |||||||||||   ||||||||    
T  32959522 taaccaaatacatgatttgtgtgatcacattttttcaattacgtgaccaccattaagaagctaaaaaatatggtcacacaactaaaatgtgtgtgaccac 32959621  T
Q  364 tattttttcattta 377  Q
    ||||||| ||||||    
T  32959622 tatttttccattta 32959635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 299
Target Start/End: Original strand, 28700039 - 28700136
Alignment:
Q  201 aataaagattgatagacacccttaatgtgtagatcattttataccactctcgaaaatttcaggtaactaaatatatggtctgtgtgaccaaattttttc 299  Q
    ||||||||| | | |||| | |||||||||| |||||||| || || |||  |||||||||| |||||||||||||||| | |||||||| ||||||||    
T  28700039 aataaagataggttgacatctttaatgtgtacatcattttgtatcattctaaaaaatttcagttaactaaatatatggt-tatgtgaccatattttttc 28700136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 269 - 318
Target Start/End: Complemental strand, 40502436 - 40502387
Alignment:
Q  269 aaatatatggtctgtgtgaccaaattttttcagttgtatgaccactattt 318  Q
    |||||||||||||||||||||| ||||||| || ||| ||||||||||||    
T  40502436 aaatatatggtctgtgtgaccacattttttaaggtgtgtgaccactattt 40502387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 211 - 318
Target Start/End: Original strand, 15714599 - 15714706
Alignment:
Q  211 gatagacacccttaatgtgtagatcattttataccactctcgaaaatttcaggtaactaaatatatggtctgtgtgaccaaattttttcagttgtatgac 310  Q
    |||||||||| ||||| |||| |   |||| |||||||||  |||||||||| || ||||||||||| | | |||||||| ||||| | |||||  ||||    
T  15714599 gatagacacctttaatatgtacacatttttgtaccactctgaaaaatttcagttagctaaatatatgatttatgtgaccacattttgttagttgcgtgac 15714698  T
Q  311 cactattt 318  Q
    ||||||||    
T  15714699 cactattt 15714706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 318
Target Start/End: Original strand, 24575864 - 24575918
Alignment:
Q  264 taactaaatatatggtctgtgtgaccaaattttttcagttgtatgaccactattt 318  Q
    |||| |||||||||||||||| ||||| ||| ||| |||||| ||||||||||||    
T  24575864 taaccaaatatatggtctgtgcgaccatattattttagttgtctgaccactattt 24575918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 327 - 392
Target Start/End: Original strand, 28700175 - 28700240
Alignment:
Q  327 aaaaatgtggtcacgcaactaaaatgcacgtgaccactattttttcatttagttaaccaaataaat 392  Q
    ||||||| | |||| ||| ||||||||| ||||||| |||||||  | ||||||||||||||||||    
T  28700175 aaaaatgcgatcacacaattaaaatgcaagtgaccattatttttctacttagttaaccaaataaat 28700240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 318
Target Start/End: Complemental strand, 40502224 - 40502175
Alignment:
Q  269 aaatatatggtctgtgtgaccaaattttttcagttgtatgaccactattt 318  Q
    |||||||||||||||||||||| ||||||| || ||  ||||||||||||    
T  40502224 aaatatatggtctgtgtgaccacattttttaaggtgcgtgaccactattt 40502175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 108; Significance: 4e-54; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 246 - 401
Target Start/End: Complemental strand, 10304865 - 10304710
Alignment:
Q  246 actctcgaaaatttcaggtaactaaatatatggtctgtgtgaccaaattttttcagttgtatgaccactatttagaagctgaaaaatgtggtcacgcaac 345  Q
    |||||||||||||| ||  |||||||||||||||||||||||||| |||||||||||||  ||| |||||||||||||| |||||||  |||||||||||    
T  10304865 actctcgaaaattttagtgaactaaatatatggtctgtgtgaccacattttttcagttgcgtgatcactatttagaagcagaaaaatacggtcacgcaac 10304766  T
Q  346 taaaatgcacgtgaccactattttttcatttagttaaccaaataaattctggaaaa 401  Q
    |||||||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  10304765 taaaatgcgcgtgaccactattttttcacttagttaaccaaataaattctggaaaa 10304710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 202 - 401
Target Start/End: Original strand, 3222332 - 3222530
Alignment:
Q  202 ataaagattgatagacacccttaatgtgtagatcattttataccactctcgaaaatttcaggtaactaaatatatggtctgtgtgaccaaattttttcag 301  Q
    |||||||||||||||||||||||||||||| | | |||  ||  |||||  |||||||||  |||| ||||||||||| | |||||||| ||||||||||    
T  3222332 ataaagattgatagacacccttaatgtgtacaccctttg-tattactcttaaaaatttcaaataaccaaatatatggtgtctgtgaccacattttttcag 3222430  T
Q  302 ttgtatgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatgcacgtgaccactattttttcatttagttaaccaaataaattctggaaaa 401  Q
    |||  ||||||||||||| | ||||||||||| |||||||||||||||||| ||||||||||||||||| || |||||||||||||||||||||||||||    
T  3222431 ttgcgtgaccactatttaaatgctgaaaaatgcggtcacgcaactaaaatgtacgtgaccactatttttccacttagttaaccaaataaattctggaaaa 3222530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 264 - 401
Target Start/End: Complemental strand, 33815163 - 33815026
Alignment:
Q  264 taactaaatatatggtctgtgtgaccaaattttttcagttgtatgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatgcacgtgaccac 363  Q
    ||||||||||||| ||||||||||||| |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  33815163 taactaaatatatagtctgtgtgaccacattttttcagttgcgtgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatgcgcgtgaccac 33815064  T
Q  364 tattttttcatttagttaaccaaataaattctggaaaa 401  Q
     |||||| || |||||||||||||||||||||| ||||    
T  33815063 catttttccacttagttaaccaaataaattctgaaaaa 33815026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 200 - 401
Target Start/End: Original strand, 22608259 - 22608459
Alignment:
Q  200 gaataaagattgatagacacccttaatgtgtagatcattttataccactctcgaaaatttcaggtaactaaatatatggtctgtgtgaccaaattttttc 299  Q
    ||||||| |||| |||| | |||||||||||| | |  ||| |||||||||| ||||||| || |||| |||||||||||||||||||| | ||||| ||    
T  22608259 gaataaaaattggtagatatccttaatgtgtacacccctttgtaccactctcaaaaattttagttaaccaaatatatggtctgtgtgactacatttt-tc 22608357  T
Q  300 agttgtatgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatgcacgtgaccactattttttcatttagttaaccaaataaattctggaa 399  Q
    |||||  ||||||||||||||||||||||||||||||||| ||||||||||||  | ||||||||||||||| | |||||||| ||||||| ||||| ||    
T  22608358 agttgcgtgaccactatttagaagctgaaaaatgtggtcatgcaactaaaatgtgcatgaccactattttttgaattagttaatcaaataatttctgaaa 22608457  T
Q  400 aa 401  Q
    ||    
T  22608458 aa 22608459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 203 - 340
Target Start/End: Original strand, 23595055 - 23595192
Alignment:
Q  203 taaagattgatagacacccttaatgtgtagatcattttataccactctcgaaaatttcaggtaactaaatatatggtctgtgtgaccaaattttttcagt 302  Q
    |||||||||  ||||||| |||||||||| | | |||| || ||||||||||||||| || ||||||||||||||||||||||||||| ||||||| |||    
T  23595055 taaagattgggagacacctttaatgtgtacacccttttgtatcactctcgaaaatttaagttaactaaatatatggtctgtgtgaccatatttttttagt 23595154  T
Q  303 tgtatgaccactatttagaagctgaaaaatgtggtcac 340  Q
    ||| |||| |||||||||||||||||||||||||||||    
T  23595155 tgtgtgacaactatttagaagctgaaaaatgtggtcac 23595192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 200 - 401
Target Start/End: Complemental strand, 3620970 - 3620770
Alignment:
Q  200 gaataaagattgatagacacccttaatgtgtagatcattttataccactctcgaaaatttcaggtaactaaatatatggtctgtgtgaccaaattttttc 299  Q
    |||||||||||||||| |  |||||||||||| |||  ||| ||| | | ||||||||||||| |||  |||||| ||||||||| ||  | | |||| |    
T  3620970 gaataaagattgatagtcggccttaatgtgtacatcgctttgtactattttcgaaaatttcagttaatcaaatatgtggtctgtgcgaatacaatttt-c 3620872  T
Q  300 agttgtatgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatgcacgtgaccactattttttcatttagttaaccaaataaattctggaa 399  Q
    | | |  ||| ||||||||||||| ||||||||||| |||| ||||||||||  | |||||||||||||||||| |||||||||||||||||||||| ||    
T  3620871 aatcgcgtgatcactatttagaagttgaaaaatgtgatcacacaactaaaatatatgtgaccactattttttcacttagttaaccaaataaattctgaaa 3620772  T
Q  400 aa 401  Q
    ||    
T  3620771 aa 3620770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 307 - 401
Target Start/End: Complemental strand, 138819 - 138725
Alignment:
Q  307 tgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatgcacgtgaccactattttttcatttagttaaccaaataaattctggaaaa 401  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||  || ||||||||||||| || ||||| |||||||||||||||| ||||    
T  138819 tgaccactatttagaagctgaaaaatgtggtcacgcaactaaattgtgcgcgaccactatttttccacttagtcaaccaaataaattctgaaaaa 138725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 307 - 401
Target Start/End: Complemental strand, 146840 - 146746
Alignment:
Q  307 tgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatgcacgtgaccactattttttcatttagttaaccaaataaattctggaaaa 401  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||  || ||||||||||||| || ||||| |||||||||||||||| ||||    
T  146840 tgaccactatttagaagctgaaaaatgtggtcacgcaactaaattgtgcgcgaccactatttttccacttagtcaaccaaataaattctgaaaaa 146746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 213 - 391
Target Start/End: Original strand, 9474545 - 9474718
Alignment:
Q  213 tagacacccttaatgtgtagatcattttataccactctcgaaaa-tttcaggtaactaaatatatggtctgtgtgac--caaattttttcagttgtatga 309  Q
    ||||||| |||||||| || ||| |||| ||||||||| ||||| |||||| || |||| |||||| ||| | ||||  || |||||||||||||  |||    
T  9474545 tagacactcttaatgtatacatccttttgtaccactcttgaaaaatttcagttagctaactatatgatctatatgacaccacattttttcagttgcgtga 9474644  T
Q  310 ccactatttagaagctgaaaaatgtggtcacgcaactaaaatgcacgtgaccactattttttcatttagttaaccaaataaa 391  Q
    |       |||||||| ||||||||||||||| || ||||||||  |||||||||||||||||| |||||||||||||||||    
T  9474645 c-------tagaagctaaaaaatgtggtcacgaaa-taaaatgcgtgtgaccactattttttcacttagttaaccaaataaa 9474718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 307 - 401
Target Start/End: Original strand, 9068411 - 9068504
Alignment:
Q  307 tgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatgcacgtgaccactattttttcatttagttaaccaaataaattctggaaaa 401  Q
    ||||||||||||| |||||||||||||||||||| || ||||||||| |||||  ||||||||| || |||| ||| ||||||| ||||||||||    
T  9068411 tgaccactatttaaaagctgaaaaatgtggtcacacatctaaaatgcgcgtgattactatttttccacttag-taaacaaataagttctggaaaa 9068504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 199 - 340
Target Start/End: Complemental strand, 11108288 - 11108147
Alignment:
Q  199 agaataaagattgatagacacccttaatgtgtagatcattttataccactctcgaaaatttcaggtaactaaatatatggtctgtgtgaccaaatttttt 298  Q
    |||||||||||   ||||||||||||||||||| ||| |||| ||  | |||  |||| ||||  |||| ||||||||| | |||||||||| |||||||    
T  11108288 agaataaagatcagtagacacccttaatgtgtatatctttttgtattattctaaaaaaattcaattaaccaaatatatgatttgtgtgaccacatttttt 11108189  T
Q  299 cagttgtatgaccactatttagaagctgaaaaatgtggtcac 340  Q
    ||||||  |||||||| |  | ||||||||||||||||||||    
T  11108188 cagttgcgtgaccactgtcaataagctgaaaaatgtggtcac 11108147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 314 - 401
Target Start/End: Original strand, 2834974 - 2835061
Alignment:
Q  314 tatttagaagctgaaaaatgtggtcacgcaactaaaatgcacgtgaccactattttttcatttagttaaccaaataaattctggaaaa 401  Q
    |||||| |||||||||||| |||||| ||||||||||| | |||||||| ||||||| || |||| |||| ||||||||| |||||||    
T  2834974 tatttaaaagctgaaaaatatggtcatgcaactaaaatacgcgtgaccattatttttccacttagctaactaaataaattatggaaaa 2835061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 201 - 318
Target Start/End: Original strand, 7706758 - 7706876
Alignment:
Q  201 aataaagattgatagacacccttaatgtgtagatcattttataccactctcgaaaatttcaggtaactaaatatatggtctgtgtgacca-aattttttc 299  Q
    |||||||||||||| ||||| |||||||||| ||| |||| ||||| |||  ||||||| || |||   |||||||||| |||||||||| | |||||||    
T  7706758 aataaagattgataaacacctttaatgtgtacatccttttgtaccattctgaaaaattttagttaatataatatatggtttgtgtgaccacatttttttc 7706857  T
Q  300 agttgtatgaccactattt 318  Q
    |||||  ||||||||||||    
T  7706858 agttgcgtgaccactattt 7706876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 213 - 318
Target Start/End: Complemental strand, 2835165 - 2835060
Alignment:
Q  213 tagacacccttaatgtgtagatcattttataccactctcgaaaatttcaggtaactaaatatatggtctgtgtgaccaaattttttcagttgtatgacca 312  Q
    |||||| |||||||||||| |||| ||| |||||||||  ||||||| || |||| |||||||   |||||||||||| ||||||| |||||| | ||||    
T  2835165 tagacagccttaatgtgtatatcaatttgtaccactctgaaaaatttaagttaaccaaatataccatctgtgtgaccacatttttttagttgtgtaacca 2835066  T
Q  313 ctattt 318  Q
    ||||||    
T  2835065 ctattt 2835060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 197 - 290
Target Start/End: Complemental strand, 24386430 - 24386337
Alignment:
Q  197 aaagaataaagattgatagacacccttaatgtgtagatcattttataccactctcgaaaatttcaggtaactaaatatatggtctgtgtgacca 290  Q
    ||||| ||||||| | | ||||||||||||||||| |||  |||||||||| ||  ||||||| || |||| ||||||||||||||||||||||    
T  24386430 aaagagtaaagataggttgacacccttaatgtgtacatccctttataccacgctgaaaaatttaagttaaccaaatatatggtctgtgtgacca 24386337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 213 - 318
Target Start/End: Original strand, 2430513 - 2430618
Alignment:
Q  213 tagacacccttaatgtgtagatcattttataccactct-cgaaaatttcaggtaactaaatatatggtctgtgtgaccaaattttttcagttgtatgacc 311  Q
    ||||||||||||||||||| ||   ||| ||||| |||   |||||||||| |||||||||||||| ||||||||||| | |||||| ||||| ||||||    
T  2430513 tagacacccttaatgtgtacattcctttgtaccattctgaaaaaatttcagttaactaaatatatgatctgtgtgacc-attttttttagttgcatgacc 2430611  T
Q  312 actattt 318  Q
    |||||||    
T  2430612 actattt 2430618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 222 - 318
Target Start/End: Complemental strand, 9068599 - 9068503
Alignment:
Q  222 ttaatgtgtagatcattttataccactctcgaaaatttcaggtaactaaatatatggtctgtgtgaccaaattttttcagttgtatgaccactattt 318  Q
    |||||||||| | | |||| |||||||||  ||||||| || |||  ||||||||||| |||||||||| ||||||| |||||  ||||||||||||    
T  9068599 ttaatgtgtacacccttttgtaccactctgaaaaattttagttaatcaaatatatggtatgtgtgaccacatttttttagttgcgtgaccactattt 9068503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 355 - 401
Target Start/End: Complemental strand, 2430663 - 2430617
Alignment:
Q  355 cgtgaccactattttttcatttagttaaccaaataaattctggaaaa 401  Q
    |||||||||||||||| || |||||||||||||||||||||| ||||    
T  2430663 cgtgaccactatttttccacttagttaaccaaataaattctgaaaaa 2430617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 264 - 318
Target Start/End: Complemental strand, 2430704 - 2430650
Alignment:
Q  264 taactaaatatatggtctgtgtgaccaaattttttcagttgtatgaccactattt 318  Q
    |||| ||||||||||| |||||||||| |||||||||||||  ||||||||||||    
T  2430704 taaccaaatatatggtttgtgtgaccacattttttcagttgcgtgaccactattt 2430650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 238 - 304
Target Start/End: Original strand, 9068329 - 9068394
Alignment:
Q  238 tttataccactctcgaaaatttcaggtaactaaatatatggtctgtgtgaccaaattttttcagttg 304  Q
    |||||||||||||||||||| |||| |||| || |||||||||||| |||||| | |||||||||||    
T  9068329 tttataccactctcgaaaatatcagttaaccaagtatatggtctgtatgaccaca-tttttcagttg 9068394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 269 - 318
Target Start/End: Complemental strand, 15341907 - 15341858
Alignment:
Q  269 aaatatatggtctgtgtgaccaaattttttcagttgtatgaccactattt 318  Q
    |||||||||||||||||||||| ||||||| || ||| ||||||||||||    
T  15341907 aaatatatggtctgtgtgaccacattttttaaggtgtgtgaccactattt 15341858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 197 - 290
Target Start/End: Original strand, 20084571 - 20084664
Alignment:
Q  197 aaagaataaagattgatagacacccttaatgtgtagatcattttataccactctcgaaaatttcaggtaactaaatatatggtctgtgtgacca 290  Q
    |||||| |||||| | | ||||||||||||||||| |||  |||||||||  ||  ||||||| || |||| ||||||||||| ||||||||||    
T  20084571 aaagaagaaagataggttgacacccttaatgtgtacatccctttataccatgctgaaaaatttaagttaaccaaatatatggtatgtgtgacca 20084664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 318
Target Start/End: Original strand, 138646 - 138726
Alignment:
Q  238 tttataccactctcgaaaatttcaggtaactaaatatatggtctgtgtgaccaaattttttcagttgtatgaccactattt 318  Q
    |||||||||||||  |||| || || |||| |||||||||||||||||| ||| ||||| | |||||  ||||||||||||    
T  138646 tttataccactctaaaaaaatttagttaaccaaatatatggtctgtgtggccacattttcttagttgcgtgaccactattt 138726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 318
Target Start/End: Original strand, 146667 - 146747
Alignment:
Q  238 tttataccactctcgaaaatttcaggtaactaaatatatggtctgtgtgaccaaattttttcagttgtatgaccactattt 318  Q
    |||||||||||||  |||| || || |||| |||||||||||||||||| ||| ||||| | |||||  ||||||||||||    
T  146667 tttataccactctaaaaaaatttagttaaccaaatatatggtctgtgtggccacattttcttagttgcgtgaccactattt 146747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 290
Target Start/End: Original strand, 10304636 - 10304684
Alignment:
Q  242 taccactctcgaaaatttcaggtaactaaatatatggtctgtgtgacca 290  Q
    |||||||||  |||||||||| |||| ||||||||||||||||||||||    
T  10304636 taccactctaaaaaatttcagttaaccaaatatatggtctgtgtgacca 10304684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 211 - 313
Target Start/End: Complemental strand, 7915798 - 7915696
Alignment:
Q  211 gatagacacccttaatgtgtagatcattttataccactctcgaaaatttcaggtaactaaatatatggtctgtgtgaccaaattttttcagttgtatgac 310  Q
    ||||||||  ||||||||||| | | | || |||||||||  |||||||||| |||  |||||||| ||||||||||||| | ||||| |||||  ||||    
T  7915798 gatagacattcttaatgtgtacaccctcttttaccactctgaaaaatttcagttaatcaaatatatcgtctgtgtgaccacaattttttagttgcgtgac 7915699  T
Q  311 cac 313  Q
    |||    
T  7915698 cac 7915696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 253 - 298
Target Start/End: Original strand, 30056072 - 30056117
Alignment:
Q  253 aaaatttcaggtaactaaatatatggtctgtgtgaccaaatttttt 298  Q
    |||||||||| |||| ||||||||||||| |||||||| |||||||    
T  30056072 aaaatttcagttaaccaaatatatggtctatgtgaccacatttttt 30056117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 253 - 297
Target Start/End: Original strand, 11108116 - 11108160
Alignment:
Q  253 aaaatttcaggtaactaaatatatggtctgtgtgaccaaattttt 297  Q
    |||||||||  |||| |||||||||||||||||||||| ||||||    
T  11108116 aaaatttcaattaaccaaatatatggtctgtgtgaccacattttt 11108160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 108; Significance: 4e-54; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 198 - 401
Target Start/End: Original strand, 9808970 - 9809173
Alignment:
Q  198 aagaataaagattgatagacacccttaatgtgtagatcattttataccactctcgaaaatttcaggtaactaaatatatggtctgtgtgaccaaattttt 297  Q
    |||||||||||| | | |||||||||||| |||| | | |||| |||| || |  |||| ||||| ||||||||||||||||||| ||||||| ||||||    
T  9808970 aagaataaagataggttgacacccttaatatgtacacccttttgtaccgctatgaaaaaattcagttaactaaatatatggtctgcgtgaccacattttt 9809069  T
Q  298 tcagttgtatgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatgcacgtgaccactattttttcatttagttaaccaaataaattctgg 397  Q
    |||||||  |||||||||||||||||||||||||||| ||||||||||| |||||| |||||||||||||||| ||||||||||||||||||| || |||    
T  9809070 tcagttgcgtgaccactatttagaagctgaaaaatgtagtcacgcaactcaaatgcgcgtgaccactatttttccatttagttaaccaaataatttatgg 9809169  T
Q  398 aaaa 401  Q
    ||||    
T  9809170 aaaa 9809173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 202 - 393
Target Start/End: Original strand, 16583496 - 16583687
Alignment:
Q  202 ataaagattgatagacacccttaatgtgtagatcattttataccactctcgaaaatttcaggtaactaaatatatggtctgtgtgaccaaattttttcag 301  Q
    |||||||||| ||||||||||||||| ||| |||  ||| ||||||||||||||||||||| |||| |||||||||||   |||||||| ||||||||||    
T  16583496 ataaagattggtagacacccttaatgcgtacatccctttgtaccactctcgaaaatttcagttaaccaaatatatggttgatgtgaccacattttttcag 16583595  T
Q  302 ttgtatgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatgcacgtgaccactattttttcatttagttaaccaaataaatt 393  Q
    |||  |||||||||||||||||||||||||| || ||| ||||||||||||| |||||||||||||||| || ||| |||||||||||||||    
T  16583596 ttgcgtgaccactatttagaagctgaaaaatatgatcatgcaactaaaatgcgcgtgaccactatttttccacttaattaaccaaataaatt 16583687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 198 - 390
Target Start/End: Original strand, 9810656 - 9810848
Alignment:
Q  198 aagaataaagattgatagacacccttaatgtgtagatcattttataccactctcgaaaatttcaggtaactaaatatatggtctgtgtgaccaaattttt 297  Q
    |||||||||||| | | |||||||||||| |||| | | |||| ||||||| |  |||||||||| ||| |||||||||||| || || |||| ||||||    
T  9810656 aagaataaagataggttgacacccttaatatgtacacccttttgtaccactatgaaaaatttcagttaattaaatatatggtttgcgttaccacattttt 9810755  T
Q  298 tcagttgtatgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatgcacgtgaccactattttttcatttagttaaccaaataa 390  Q
    |||||||  ||||||||||||||||||| |||||||| ||||||||||| |||||  ||||||| |||||||| |||||||||||||||||||    
T  9810756 tcagttgcgtgaccactatttagaagctaaaaaatgtagtcacgcaactcaaatgtgcgtgacctctatttttccatttagttaaccaaataa 9810848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 200 - 395
Target Start/End: Complemental strand, 33179970 - 33179775
Alignment:
Q  200 gaataaagattgatagacacccttaatgtgtagatcattttataccactctcgaaaatttcaggtaactaaatatatggtctgtgtgaccaaattttttc 299  Q
    |||||| ||||| |||||| |||||||||||| ||   ||||||||||| |||||||||| |  |||||||||||||||| ||||| |||| || |||||    
T  33179970 gaataatgattggtagacatccttaatgtgtatatttctttataccactatcgaaaattttaattaactaaatatatggtatgtgttaccatatcttttc 33179871  T
Q  300 agttgtatgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatgcacgtgaccactattttttcatttagttaaccaaataaattct 395  Q
    || ||  ||||||||||||||||  |||||||||||| ||| ||||||||||||  ||||||||||||||| || |||||||| ||||||||||||    
T  33179870 agctgcgtgaccactatttagaaagtgaaaaatgtggccacacaactaaaatgcgtgtgaccactatttttccacttagttaatcaaataaattct 33179775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 200 - 398
Target Start/End: Complemental strand, 17633552 - 17633354
Alignment:
Q  200 gaataaagattgatagacacccttaatgtgtagatcattttataccactctcgaaaatttcaggtaactaaatatatggtctgtgtgaccaaattttttc 299  Q
    |||||||||| | | || ||||||||| |||| | |  ||| ||||||| |  |||||||||| |||| |||||||||||||||||||||| ||||||||    
T  17633552 gaataaagataggttgatacccttaatatgtacacccctttgtaccactttgaaaaatttcagttaaccaaatatatggtctgtgtgaccacattttttc 17633453  T
Q  300 agttgtatgaccactatttagaagct-gaaaaatgtggtcacgcaactaaaatgcacgtgaccactattttttcatttagttaaccaaataaattctgga 398  Q
    |||||  ||||||| || |||||| | ||||||| |||||||||||||||||||| ||||||||||||||||| | ||||||||||||||||||| ||||    
T  17633452 agttgcgtgaccac-atctagaagtttgaaaaatatggtcacgcaactaaaatgcgcgtgaccactattttttaacttagttaaccaaataaattttgga 17633354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 242 - 393
Target Start/End: Complemental strand, 55666993 - 55666844
Alignment:
Q  242 taccactctcgaaaatttcaggtaactaaatatatggtctgtgtgaccaaattttttcagttgtatgaccactatttagaagctgaaaaatgtggtcacg 341  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||| | |||||||||||  |||||| |||||| ||||||||||| |||||||||    
T  55666993 taccactttcgaaaatttcagttaactaaatatatggtctgtgtgaccaca-tttttcagttgcgtgaccattatttataagctgaaaaacgtggtcacg 55666895  T
Q  342 caactaaaatgcacgtgaccactattttttcatttagttaaccaaataaatt 393  Q
     ||||||||||  |||||||||||||||| || |||||||| ||||||||||    
T  55666894 -aactaaaatgttcgtgaccactatttttccacttagttaagcaaataaatt 55666844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 253 - 398
Target Start/End: Complemental strand, 35544577 - 35544433
Alignment:
Q  253 aaaatttcaggtaactaaatatatggtctgtgtgaccaaattttttcagttgtatgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatg 352  Q
    |||||||||| |||  ||||||||||| ||||||| || |||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  35544577 aaaatttcagttaatcaaatatatggtatgtgtgatcacattttttccgttgtatgaccactatttagaagctgaaaaatgtggtcacgcaact-aaatg 35544479  T
Q  353 cacgtgaccactattttttcatttagttaaccaaataaattctgga 398  Q
    |  |||| |||||||||| || ||| ||||| ||||||||| ||||    
T  35544478 cgtgtgatcactatttttccacttaattaactaaataaattttgga 35544433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 200 - 401
Target Start/End: Complemental strand, 8741002 - 8740801
Alignment:
Q  200 gaataaagattgatagacacccttaatgtgtagatcattttataccactctcgaaaatttcaggtaactaaatatatggtctgtgtgaccaaatttttt- 298  Q
    |||||||||| | |||||| | | |||||||| ||  |||| || ||||||| ||| |||||| |||  |||| |||| |||||||||||| |||||||     
T  8741002 gaataaagatcggtagacatcttcaatgtgtacattcttttgtatcactctcaaaattttcagttaatcaaatgtatgatctgtgtgaccatattttttt 8740903  T
Q  299 cagttgtatgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatgcacgtgaccactattttttcatttagttaaccaaataaattctgga 398  Q
    ||||||  ||| |||||||||||||||||||||||||||||||  |||||||||| ||||||||||||||||  | ||||||||| ||||||||| ||||    
T  8740902 cagttgcgtgatcactatttagaagctgaaaaatgtggtcacg-tactaaaatgcgcgtgaccactatttttctacttagttaactaaataaattatgga 8740804  T
Q  399 aaa 401  Q
    |||    
T  8740803 aaa 8740801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 202 - 396
Target Start/End: Original strand, 19596680 - 19596876
Alignment:
Q  202 ataaagattgatagacacccttaatgtgtagatcattttataccactctcgaaaatttcaggtaactaaatatatggtctgtgtgaccaaatttttt--c 299  Q
    ||||||||||||||||| | |||||||||| | |  ||| |||||||||  ||||| || | | || |||||||||||| | ||||||| |||||||  |    
T  19596680 ataaagattgatagacatctttaatgtgtacacccctttgtaccactctgaaaaatctctgttgaccaaatatatggtcagcgtgaccacattttttttc 19596779  T
Q  300 agttgtatgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatgcacgtgaccactattttttcatttagttaaccaaataaattctg 396  Q
    || ||| | |||| |||||||||||||||||||||||||||||||||||||||| | |||| |||||||   || ||||||||||||||||||||||    
T  19596780 agctgtgtaaccattatttagaagctgaaaaatgtggtcacgcaactaaaatgcgcatgactactatttacccacttagttaaccaaataaattctg 19596876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 293 - 401
Target Start/End: Complemental strand, 1966950 - 1966843
Alignment:
Q  293 ttttttcagttgtatgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatgcacgtgaccactattttttcatttagttaaccaaataaat 392  Q
    |||||| |||||  |||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| || ||| ||||||||||||||    
T  1966950 tttttttagttgcgtgaccactatttagaagctgaaaaatgtggtcacgcaact-aaatgcgcgtgaccactatttttccacttaattaaccaaataaat 1966852  T
Q  393 tctggaaaa 401  Q
    |||||||||    
T  1966851 tctggaaaa 1966843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 283 - 393
Target Start/End: Original strand, 2433693 - 2433802
Alignment:
Q  283 tgtgaccaaattttttcagttgtatgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatgcacgtgaccactattttttcatttagttaa 382  Q
    ||||| || |||||||||||||| ||||||||||||||||||||||||||||||||| | ||  ||||||||||||||||||||||||||| || |||||    
T  2433693 tgtgatcacattttttcagttgtttgaccactatttagaagctgaaaaatgtggtcatg-aaaaaaaatgcacgtgaccactattttttcactttgttaa 2433791  T
Q  383 ccaaataaatt 393  Q
    |||||||||||    
T  2433792 ccaaataaatt 2433802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 252 - 401
Target Start/End: Original strand, 42908519 - 42908667
Alignment:
Q  252 gaaaatttcaggtaactaaatatatggtctgtgtgaccaaattttttcagttgtatgaccactatttagaagctgaaaaa-tgtggtcacgcaactaaaa 350  Q
    |||||||| ||  ||| ||||||||||||||| |||||| |||||| ||||||| ||||||| ||||| ||| ||||||| |||| ||||||||||||||    
T  42908519 gaaaattttagtgaaccaaatatatggtctgtttgaccatattttt-cagttgtgtgaccac-atttaaaagttgaaaaaatgtgatcacgcaactaaaa 42908616  T
Q  351 tgcacgtgaccactattttttcatttagttaaccaaataaattctggaaaa 401  Q
    ||| |||||||||||| ||| |  |||||||||||||||||||||||||||    
T  42908617 tgcgcgtgaccactatgtttcctcttagttaaccaaataaattctggaaaa 42908667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 295 - 393
Target Start/End: Complemental strand, 33249732 - 33249634
Alignment:
Q  295 ttttcagttgtatgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatgcacgtgaccactattttttcatttagttaaccaaataaatt 393  Q
    ||||||||||  ||||||||||||||||| |||||||||||||||||||  ||||||||  ||||||||||||||| ||  ||||||| ||||||||||    
T  33249732 ttttcagttgcgtgaccactatttagaaggtgaaaaatgtggtcacgcacataaaatgcgtgtgaccactatttttccacctagttaatcaaataaatt 33249634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 243 - 393
Target Start/End: Original strand, 14351005 - 14351153
Alignment:
Q  243 accactctcgaaaatttcaggtaactaaatatatggtctgtgtgaccaaattttttcagttgtatgaccactatttagaagctgaaaaatgtggtcacgc 342  Q
    |||||||||||||||||||| |||| |||||||   | ||| ||  || |||||  || ||| || |||||||||| |||||| ||| ||||| ||||||    
T  14351005 accactctcgaaaatttcagttaaccaaatatacaatttgtatggtcacatttt--caattgcataaccactattttgaagctaaaagatgtgatcacgc 14351102  T
Q  343 aactaaaatgcacgtgaccactattttttcatttagttaaccaaataaatt 393  Q
    ||||||||||  | |||||||||||||| || |||||||||||||||||||    
T  14351103 aactaaaatgtccatgaccactatttttccacttagttaaccaaataaatt 14351153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 315 - 392
Target Start/End: Original strand, 24669197 - 24669274
Alignment:
Q  315 atttagaagctgaaaaatgtggtcacgcaactaaaatgcacgtgaccactattttttcatttagttaaccaaataaat 392  Q
    |||||||| || |||||| |||||||||||||||||| |  |||||||||||||||||| ||||||||||||||||||    
T  24669197 atttagaaactcaaaaatatggtcacgcaactaaaattcgtgtgaccactattttttcacttagttaaccaaataaat 24669274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 281 - 349
Target Start/End: Original strand, 20874812 - 20874880
Alignment:
Q  281 tgtgtgaccaaattttttcagttgtatgaccactatttagaagctgaaaaatgtggtcacgcaactaaa 349  Q
    |||||||||| |||||||||||||  ||| |||| |||||||||||||||||||||| |||||||||||    
T  20874812 tgtgtgaccatattttttcagttgcgtgatcactttttagaagctgaaaaatgtggtaacgcaactaaa 20874880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 213 - 315
Target Start/End: Original strand, 1966741 - 1966841
Alignment:
Q  213 tagacacccttaatgtgtagatcattttataccactctcgaaaatttcaggtaactaaatatatggtctgtgtgaccaaattttttcagttgtatgacca 312  Q
    |||||||||||| ||| || | | |||| ||||||||| ||||||||||| |||| |||||||||||||||||||||| ||||||| |||||  ||||||    
T  1966741 tagacacccttactgtatacacccttttgtaccactct-gaaaatttcagttaaccaaatatatggtctgtgtgaccacatttttt-agttgcgtgacca 1966838  T
Q  313 cta 315  Q
    |||    
T  1966839 cta 1966841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 242 - 319
Target Start/End: Complemental strand, 24669347 - 24669270
Alignment:
Q  242 taccactctcgaaaatttcaggtaactaaatatatggtctgtgtgaccaaattttttcagttgtatgaccactattta 319  Q
    |||||||||  ||||||| || |||  |||||||||||||||||||||| |||||||||||||  |||||||||||||    
T  24669347 taccactctgaaaaatttaagttaatcaaatatatggtctgtgtgaccacattttttcagttgcgtgaccactattta 24669270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 199 - 290
Target Start/End: Complemental strand, 19747034 - 19746943
Alignment:
Q  199 agaataaagattgatagacacccttaatgtgtagatcattttataccactctcgaaaatttcaggtaactaaatatatggtctgtgtgacca 290  Q
    ||||||||||||  |||||||  |||||||||| | |  ||| || || ||||||||||||||| |||||||||| ||||||||| ||||||    
T  19747034 agaataaagattagtagacacttttaatgtgtacacccctttgtatcattctcgaaaatttcagttaactaaatacatggtctgtttgacca 19746943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 199 - 290
Target Start/End: Original strand, 19792772 - 19792863
Alignment:
Q  199 agaataaagattgatagacacccttaatgtgtagatcattttataccactctcgaaaatttcaggtaactaaatatatggtctgtgtgacca 290  Q
    ||||||||||||  |||||||  |||||||||| | |  ||| || || ||||||||||||||| |||||||||| ||||||||| ||||||    
T  19792772 agaataaagattagtagacacttttaatgtgtacacccctttgtatcattctcgaaaatttcagttaactaaatacatggtctgtttgacca 19792863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 201 - 288
Target Start/End: Complemental strand, 25007711 - 25007625
Alignment:
Q  201 aataaagattgatagacacccttaatgtgtagatcattttataccactctcgaaaatttcaggtaactaaatatatggtctgtgtgac 288  Q
    ||||||||||| ||||||| |||||||| || | | |||  ||||| ||||||||||||||| |||| ||||||||||||| ||||||    
T  25007711 aataaagattggtagacactcttaatgtatacaccctttg-taccattctcgaaaatttcagttaaccaaatatatggtctatgtgac 25007625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 221 - 298
Target Start/End: Complemental strand, 9810958 - 9810881
Alignment:
Q  221 cttaatgtgtagatcattttataccactctcgaaaatttcaggtaactaaatatatggtctgtgtgaccaaatttttt 298  Q
    ||||||||||| | |  ||| ||||||||| |||| ||| || |||| |||||||||||||||||||||| |||||||    
T  9810958 cttaatgtgtaaacctatttgtaccactctagaaattttaagttaaccaaatatatggtctgtgtgaccacatttttt 9810881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 213 - 318
Target Start/End: Complemental strand, 14351265 - 14351160
Alignment:
Q  213 tagacacccttaatgtgtagatcattttataccactctcgaaaatttcaggtaactaaatatatggtctgtgtgaccaaattttttcagttgtatgacca 312  Q
    ||||||||||||||||||  |    ||| |||||||||| |||| || || |||| ||||||||||| |||||||||| ||||||  |||||  ||||||    
T  14351265 tagacacccttaatgtgtgcacttctttgtaccactctcaaaaaatttagttaaccaaatatatggtttgtgtgaccatatttttctagttgcgtgacca 14351166  T
Q  313 ctattt 318  Q
    ||||||    
T  14351165 ctattt 14351160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 213 - 298
Target Start/End: Complemental strand, 19596986 - 19596901
Alignment:
Q  213 tagacacccttaatgtgtagatcattttataccactctcgaaaatttcaggtaactaaatatatggtctgtgtgaccaaatttttt 298  Q
    ||||| ||||||||||||| ||| |||| ||||  | | ||||||||||| |||| |||||||||||  ||||||||| |||||||    
T  19596986 tagacgcccttaatgtgtacatccttttgtacccttttggaaaatttcagttaaccaaatatatggtacgtgtgaccacatttttt 19596901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 293 - 331
Target Start/End: Complemental strand, 1967016 - 1966978
Alignment:
Q  293 ttttttcagttgtatgaccactatttagaagctgaaaaa 331  Q
    ||||||||||||  |||||||||||||||||||||||||    
T  1967016 ttttttcagttgcgtgaccactatttagaagctgaaaaa 1966978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 298
Target Start/End: Complemental strand, 9809271 - 9809194
Alignment:
Q  221 cttaatgtgtagatcattttataccactctcgaaaatttcaggtaactaaatatatggtctgtgtgaccaaatttttt 298  Q
    ||||||||||| | |  ||| ||||||||| |||| ||| || |||| || ||||||||||||||||||| |||||||    
T  9809271 cttaatgtgtaaacctatttgtaccactctagaaattttaagttaaccaagtatatggtctgtgtgaccacatttttt 9809194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 253 - 298
Target Start/End: Original strand, 17633288 - 17633333
Alignment:
Q  253 aaaatttcaggtaactaaatatatggtctgtgtgaccaaatttttt 298  Q
    ||||||| || |||| |||||||||||||||||||||| |||||||    
T  17633288 aaaattttagttaaccaaatatatggtctgtgtgaccacatttttt 17633333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 285
Target Start/End: Original strand, 20871742 - 20871827
Alignment:
Q  200 gaataaagattgatagacacccttaatgtgtagatcattttataccactctcgaaaatttcaggtaactaaatatatggtctgtgt 285  Q
    |||||||||||||||||||  ||| |||||||  || |||||||| |||||  |||||||||  |||  ||||||||||| |||||    
T  20871742 gaataaagattgatagacatgcttgatgtgtacgtctttttatactactctgaaaaatttcaattaatcaaatatatggtatgtgt 20871827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 242 - 298
Target Start/End: Complemental strand, 42908741 - 42908685
Alignment:
Q  242 taccactctcgaaaatttcaggtaactaaatatatggtctgtgtgaccaaatttttt 298  Q
    |||||||||  ||||||| || |||| ||||||||||| |||||||||| |||||||    
T  42908741 taccactctgaaaaatttaagttaaccaaatatatggtatgtgtgaccacatttttt 42908685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 108; Significance: 4e-54; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 238 - 401
Target Start/End: Complemental strand, 42638129 - 42637966
Alignment:
Q  238 tttataccactctcgaaaatttcaggtaactaaatatatggtctgtgtgaccaaattttttcagttgtatgaccactatttagaagctgaaaaatgtggt 337  Q
    ||||||| ||||||||||||||||| |||||||||||||||| | | |||||| |||||||||||||  |||||||||||||||||||||||||||||||    
T  42638129 tttatacaactctcgaaaatttcagttaactaaatatatggtatatatgaccacattttttcagttgcgtgaccactatttagaagctgaaaaatgtggt 42638030  T
Q  338 cacgcaactaaaatgcacgtgaccactattttttcatttagttaaccaaataaattctggaaaa 401  Q
    |||||||||||||||| ||| ||||||||||||  | |||||||||||||||||||||| ||||    
T  42638029 cacgcaactaaaatgcgcgtaaccactatttttcaacttagttaaccaaataaattctgaaaaa 42637966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 198 - 401
Target Start/End: Original strand, 3785858 - 3786061
Alignment:
Q  198 aagaataaagattgatagacacccttaatgtgtagatcattttataccactctcgaaaatttcaggtaactaaatatatggtctgtgtgaccaaattttt 297  Q
    |||||||||||||| ||||||||||||||||||| | |  ||| ||||||||||||||||||||| |||| || | ||||||||||||||||| ||||||    
T  3785858 aagaataaagattggtagacacccttaatgtgtacacccctttgtaccactctcgaaaatttcagttaaccaattttatggtctgtgtgaccacattttt 3785957  T
Q  298 tcagttgtatgaccactatttagaagctg-aaaaatgtggtcacgcaactaaaatgcacgtgaccactattttttcatttagttaaccaaataaattctg 396  Q
    || |||   ||||||||||||| |||||| |||||| |||||||||||||||||||| |||||||||| ||||| || ||||||||||||||||||| ||    
T  3785958 tctgttacgtgaccactatttataagctgaaaaaatatggtcacgcaactaaaatgcgcgtgaccact-tttttccacttagttaaccaaataaattatg 3786056  T
Q  397 gaaaa 401  Q
    |||||    
T  3786057 gaaaa 3786061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 198 - 401
Target Start/End: Original strand, 3823547 - 3823751
Alignment:
Q  198 aagaataaagattgatagacacccttaatgtgtagatcattttataccactctcgaaaatttcaggtaactaaatatatggtctgtgtgaccaaattttt 297  Q
    |||||||||||||  ||||||||||||||||||| | |  ||| ||||||||||||||||||||| |||| || ||||||||||||||||||| ||||||    
T  3823547 aagaataaagattagtagacacccttaatgtgtacacccctttgtaccactctcgaaaatttcagttaaccaattatatggtctgtgtgaccacattttt 3823646  T
Q  298 tcagttgtatgaccactatttagaagctg--aaaaatgtggtcacgcaactaaaatgcacgtgaccactattttttcatttagttaaccaaataaattct 395  Q
    || ||||  ||||||||||||| ||||||  |||||| ||||||||||||||||||||  ||||||||| ||||| || ||||||||||||||||||| |    
T  3823647 tctgttgcgtgaccactatttataagctgaaaaaaatatggtcacgcaactaaaatgcgtgtgaccact-tttttccacttagttaaccaaataaattat 3823745  T
Q  396 ggaaaa 401  Q
    ||||||    
T  3823746 ggaaaa 3823751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 198 - 396
Target Start/End: Complemental strand, 9710931 - 9710739
Alignment:
Q  198 aagaataaagattgatagacacccttaatgtgtagatcattttataccactctcgaaaatttcaggtaactaaatatatggtctgtgtgaccaaattttt 297  Q
    |||||||||||||| |||| ||||||||| |||| | |  ||| |||||||||  |||||||||| |||| |||||||||||     |||||| ||||||    
T  9710931 aagaataaagattggtagaaacccttaatatgtacacccctttgtaccactctgaaaaatttcagttaaccaaatatatggt-----tgaccatattttt 9710837  T
Q  298 tcagttgtatgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatgcacgtgaccactattttttcatttagttaaccaaataaattctg 396  Q
    || ||||  ||||||||| |||||||||||||| ||||||||||||||| |||| ||| |||||||||||||| || ||||||||||||||||||||||    
T  9710836 tcggttgcgtgaccactacttagaagctgaaaactgtggtcacgcaact-aaatacacttgaccactatttttccacttagttaaccaaataaattctg 9710739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 199 - 401
Target Start/End: Original strand, 44080153 - 44080355
Alignment:
Q  199 agaataaagattgatagacacccttaatgtgtagatcattttataccactctcgaaaatttcaggtaactaaatatatggtctgtgtgaccaaatttttt 298  Q
    ||||||||||| |||||| | |||||||||||| ||   ||| |||||||||  | |||||||| |||| ||||||||  |||||||||||| |||||||    
T  44080153 agaataaagatcgatagatatccttaatgtgtacatatctttgtaccactctgaacaatttcagttaaccaaatatataatctgtgtgaccatatttttt 44080252  T
Q  299 -cagttgtatgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatgcacgtgaccactattttttcatttagttaaccaaataaattctgg 397  Q
     ||||||  ||||||||||||||||| ||||||||||||||||  ||||||||||  |||| ||||||||||| || ||||||||||||| ||||| |||    
T  44080253 gcagttgcgtgaccactatttagaagttgaaaaatgtggtcac-aaactaaaatgtgcgtgcccactatttttccacttagttaaccaaaaaaattttgg 44080351  T
Q  398 aaaa 401  Q
    ||||    
T  44080352 aaaa 44080355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 200 - 401
Target Start/End: Complemental strand, 4169305 - 4169115
Alignment:
Q  200 gaataaagattgatagacacccttaatgtgtagatcattttataccactctcgaaaatttcaggtaactaaatatatggtctgtgtgaccaaattttttc 299  Q
    |||||||||||||||| || | ||||| ||||   | |||| ||||  ||||||||||||||| |||||||||||||||||| ||||| || |||         
T  4169305 gaataaagattgatagtcaactttaatatgtac--ccttttgtacctatctcgaaaatttcagttaactaaatatatggtctatgtgatcacatt----- 4169213  T
Q  300 agttgtatgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatgcacgtgaccactattttttcatttagttaaccaaataaattctggaa 399  Q
        |  ||||||||||||||||||||||||||||||| ||||||||||||||  |||||||||||||||| ||||||||||||||||||||||||| ||    
T  4169212 ----gcgtgaccactatttagaagctgaaaaatgtggtaacgcaactaaaatgtgcgtgaccactatttttccatttagttaaccaaataaattctgaaa 4169117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 269 - 401
Target Start/End: Complemental strand, 26308782 - 26308650
Alignment:
Q  269 aaatatatggtctgtgtgaccaaattttttcagttgtatgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatgcacgtgaccactattt 368  Q
    ||||||||||| |||||| ||| |||||| || || |  ||||||||||||||||||||| ||||||||||||||| |||||||| ||||||||||||||    
T  26308782 aaatatatggtttgtgtggccacatttttccaattctgggaccactatttagaagctgaataatgtggtcacgcaattaaaatgcgcgtgaccactattt 26308683  T
Q  369 tttcatttagttaaccaaataaattctggaaaa 401  Q
    || || ||| |||||||||||||||||||||||    
T  26308682 ttccacttacttaaccaaataaattctggaaaa 26308650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 199 - 401
Target Start/End: Complemental strand, 1705880 - 1705680
Alignment:
Q  199 agaataaagattgatagacacccttaatgtgtagatcattttataccactctcgaaaatttcaggtaactaaatatatggtctgtgtgaccaaatttttt 298  Q
    |||||||| || |||  |||||||||||||||| ||| || | || || | |  |||||||||| |||| ||||| ||| | ||||||| || ||||||     
T  1705880 agaataaaaatagattaacacccttaatgtgtacatccttgtgtatcattgtaaaaaatttcagttaaccaaatacatgatatgtgtgatcatattttt- 1705782  T
Q  299 cagttgtatgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatgcacgtgaccactattttttcatttagttaaccaaataaattctgga 398  Q
     |||||  |||||||||||||||||||||||||| |||||| ||||||||||||| |||||||||||||||| |  |||||||||||||||| |||||||    
T  1705781 -agttgcgtgaccactatttagaagctgaaaaatatggtcatgcaactaaaatgcgcgtgaccactatttttccccttagttaaccaaataatttctgga 1705683  T
Q  399 aaa 401  Q
    |||    
T  1705682 aaa 1705680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 200 - 393
Target Start/End: Original strand, 19280098 - 19280288
Alignment:
Q  200 gaataaagattgatagacacccttaatgtgtagatcattttataccactctcgaaaatttcaggtaactaaatatatggtctgtgtgaccaaattttttc 299  Q
    |||||||||| | ||||||||||||| ||||| | |  ||| |||||||    || |||| || |||| |||||||||||||| ||||||| ||||||||    
T  19280098 gaataaagatcggtagacacccttaaagtgtacacccctttgtaccactaa--aatattttagttaaccaaatatatggtctgagtgaccacattttttc 19280195  T
Q  300 agttgtatgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatgcacgtgaccactattttttcatttagttaaccaaataaatt 393  Q
    || ||  |||||||| |||||||| ||||||||||||||||||||||||||| | ||||||||||| |||| || |||||||||||||||||||    
T  19280196 agatgcgtgaccactgtttagaagttgaaaaatgtggtcacgcaactaaaattcgcgtgaccacta-ttttccacttagttaaccaaataaatt 19280288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 259 - 396
Target Start/End: Original strand, 5341833 - 5341970
Alignment:
Q  259 tcaggtaactaaatatatggtctgtgtgaccaaattttttcagttgtatgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatgcacgtg 358  Q
    |||| ||| |||||||||||| |||||||||| ||||||| || ||  ||||||||||||||||| |||||||||||||||  |||||||||| ||  ||    
T  5341833 tcagttaattaaatatatggtttgtgtgaccatatttttttagctgcgtgaccactatttagaagttgaaaaatgtggtcatacaactaaaatacatatg 5341932  T
Q  359 accactattttttcatttagttaaccaaataaattctg 396  Q
    |||||||||||| || ||||||||||||||||||||||    
T  5341933 accactatttttccacttagttaaccaaataaattctg 5341970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 203 - 368
Target Start/End: Original strand, 11509804 - 11509969
Alignment:
Q  203 taaagattgatagacacccttaatgtgtagatcattttataccactctcgaaaatttcaggtaactaaatatatggtctgtgtgaccaaattttttcagt 302  Q
    ||||||||||||||||| ||||||||||| | |  ||| |||||||||  |||||||||  |||| ||||||  | | |||||||||| ||||||||| |    
T  11509804 taaagattgatagacacacttaatgtgtacacccctttgtaccactcttaaaaatttcaaataaccaaatatgcgatttgtgtgaccacattttttcact 11509903  T
Q  303 tgtatgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatgcacgtgaccactattt 368  Q
    ||  |||||  |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||    
T  11509904 tgcgtgacctttatttagaagctgaaaaatgtggtcacgcaactaaaatgcgcgtgacccctattt 11509969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 253 - 401
Target Start/End: Original strand, 19624257 - 19624404
Alignment:
Q  253 aaaatttcaggtaactaaatatatggtctgtgtgaccaaattttttcagttgtatgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatg 352  Q
    |||||||||| |||  |||||||| ||||  |||| || |||| ||||||||| |||||| |||||| ||||| ||| |||||| ||| |||||||||||    
T  19624257 aaaatttcagttaatcaaatatatagtctaagtgatcatatttcttcagttgtgtgacca-tatttataagctaaaatatgtggccacccaactaaaatg 19624355  T
Q  353 cacgtgaccactattttttcatttagttaaccaaataaattctggaaaa 401  Q
    |||||||||||||||||| || ||||||||||| |||||||||||||||    
T  19624356 cacgtgaccactatttttccacttagttaaccacataaattctggaaaa 19624404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 292 - 401
Target Start/End: Original strand, 31545606 - 31545715
Alignment:
Q  292 attttttcagttgtatgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatgcacgtgaccactattttttcatttagttaaccaaataaa 391  Q
    |||||||||||||  | |||||||||||||||||||||||||||||||| |||||||||||  | ||||||||||||||  | ||||||||| |||||||    
T  31545606 attttttcagttgagtaaccactatttagaagctgaaaaatgtggtcacacaactaaaatgtgcatgaccactatttttctacttagttaacaaaataaa 31545705  T
Q  392 ttctggaaaa 401  Q
    ||||||||||    
T  31545706 ttctggaaaa 31545715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 315 - 392
Target Start/End: Complemental strand, 27335479 - 27335402
Alignment:
Q  315 atttagaagctgaaaaatgtggtcacgcaactaaaatgcacgtgaccactattttttcatttagttaaccaaataaat 392  Q
    |||||||||||||||||||||||||| |||||||||| |||||||||||||||||| || ||||||||||||||||||    
T  27335479 atttagaagctgaaaaatgtggtcacacaactaaaatacacgtgaccactatttttccacttagttaaccaaataaat 27335402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 269 - 401
Target Start/End: Original strand, 27707641 - 27707772
Alignment:
Q  269 aaatatatggtctgtgtgaccaaattttttcagttgtatgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatgcacgtgaccactattt 368  Q
    ||||||||||| |||||| ||| ||||||||| |||| ||||||| |||| ||| || |||||||||||| | |||||||||||  | ||||||||||||    
T  27707641 aaatatatggtttgtgtgcccacattttttcaattgtgtgaccac-attttgaaactaaaaaatgtggtcgcacaactaaaatgtgcatgaccactattt 27707739  T
Q  369 tttcatttagttaaccaaataaattctggaaaa 401  Q
    ||||| ||  |||||||||||||||||||||||    
T  27707740 tttcacttgattaaccaaataaattctggaaaa 27707772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 242 - 373
Target Start/End: Original strand, 23163268 - 23163400
Alignment:
Q  242 taccactctcgaaaatttcaggtaactaaatatatggtctgtgtgaccaaatttttt--cagttgtatgaccactatttagaagctgaaaaatgtggtca 339  Q
    |||||||||||||||| |||| |||   |||||||||||| |||||| | |||||||  |||||| ||||||||||| |||| |||||||||| ||||||    
T  23163268 taccactctcgaaaatatcagttaatctaatatatggtctatgtgactacattttttatcagttgcatgaccactatgtaga-gctgaaaaatatggtca 23163366  T
Q  340 cgcaactaaaatgcacgtgaccactattttttca 373  Q
    | |||||||||||||||||| || ||||||||||    
T  23163367 cacaactaaaatgcacgtgatcattattttttca 23163400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 307 - 401
Target Start/End: Original strand, 42481305 - 42481399
Alignment:
Q  307 tgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatgcacgtgaccactattttttcatttagttaaccaaataaattctggaaaa 401  Q
    ||||||||||||| || ||||||||| ||||||| ||||||||||| ||||||||| |||||||  | |||||||||||||||||||||| ||||    
T  42481305 tgaccactatttaaaaactgaaaaatatggtcacacaactaaaatgtacgtgaccattatttttctacttagttaaccaaataaattctgaaaaa 42481399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 198 - 393
Target Start/End: Original strand, 22432233 - 22432421
Alignment:
Q  198 aagaataaagattgatagacacccttaatgtgtagatcattttataccactctcgaaaatttcaggtaactaaatatatggtctgtgtgaccaaattttt 297  Q
    |||||||||||||| ||| || |||||||||||| ||    || ||  ||||||||||||||||| |||  ||| |||||||       |||| ||||||    
T  22432233 aagaataaagattggtaggcatccttaatgtgtacatatccttgtattactctcgaaaatttcagttaatcaaaaatatggt-------accatattttt 22432325  T
Q  298 tcagttgtatgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatgcacgtgaccactattttttcatttagttaaccaaataaatt 393  Q
    |||||||  || |||||||||| |||||||||||||||||||  ||||||||||||  ||| ||||||||||| ||  ||||| ||||||||||||    
T  22432326 tcagttgcgtgtccactatttaaaagctgaaaaatgtggtcaatcaactaaaatgcgtgtgtccactatttttccacatagttgaccaaataaatt 22432421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 238 - 394
Target Start/End: Complemental strand, 34627468 - 34627316
Alignment:
Q  238 tttataccactctcgaaaatttcaggtaactaaatatatggtctgtgtgaccaaattttttcagttgtatgaccactatttagaagctg-aaaaatgtgg 336  Q
    ||||||||| | | ||||||||||| ||||||    |||| |||||||||| | ||||||||||||| | |  ||||||||| || | | ||||||||||    
T  34627468 tttataccattatagaaaatttcagttaacta----tatgatctgtgtgac-acattttttcagttgcaaggacactatttaaaacccggaaaaatgtgg 34627374  T
Q  337 tcacgcaactaaaatgcacgtgaccactattttttcatttagttaaccaaataaattc 394  Q
    ||||||||||||||| || || |||| ||||||| |||||||||||||||||||||||    
T  34627373 tcacgcaactaaaatacatgtaaccattatttttccatttagttaaccaaataaattc 34627316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 294 - 393
Target Start/End: Complemental strand, 13358208 - 13358110
Alignment:
Q  294 tttttcagttgtatgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatgcacgtgaccactattttttcatttagttaaccaaataaatt 393  Q
    ||||||| ||| ||||||| ||||||||||||||||||| ||||||| ||| |||||||| ||| |||||||||||| ||  ||||||||||||||||||    
T  13358208 tttttcaattgcatgacca-tatttagaagctgaaaaatatggtcacacaattaaaatgcgcgttaccactatttttccacatagttaaccaaataaatt 13358110  T

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Target: chr3; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 252 - 393
Target Start/End: Complemental strand, 27079454 - 27079314
Alignment:
Q  252 gaaaatttcaggtaactaaatatatggtctgtgtgaccaaattttttcagttgtatgaccac--tatttagaagctgaaaaatgtggtcacgcaactaaa 349  Q
    ||||||||| | |||| |||||||||||||||||||||| | ||||||||||| ||||||||  | |||  ||    ||||||||||||||| | |||||    
T  27079454 gaaaatttcggttaaccaaatatatggtctgtgtgaccacaatttttcagttgcatgaccacaattttttcaa---aaaaaatgtggtcacgtagctaaa 27079358  T
Q  350 atgcacgtgaccactattttttcatttagttaaccaaataaatt 393  Q
    |||| ||||||||  |||||| || |||||||| ||||||||||    
T  27079357 atgcgcgtgaccatcatttttccacttagttaatcaaataaatt 27079314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 252 - 393
Target Start/End: Complemental strand, 27085251 - 27085111
Alignment:
Q  252 gaaaatttcaggtaactaaatatatggtctgtgtgaccaaattttttcagttgtatgaccac--tatttagaagctgaaaaatgtggtcacgcaactaaa 349  Q
    ||||||||| | |||| |||||||||||||||||||||| | ||||||||||| ||||||||  | |||  ||    ||||||||||||||| | |||||    
T  27085251 gaaaatttcggttaaccaaatatatggtctgtgtgaccacaatttttcagttgcatgaccacaattttttcaa---aaaaaatgtggtcacgtagctaaa 27085155  T
Q  350 atgcacgtgaccactattttttcatttagttaaccaaataaatt 393  Q
    |||| ||||||||  |||||| || |||||||| ||||||||||    
T  27085154 atgcgcgtgaccatcatttttccacttagttaatcaaataaatt 27085111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 315 - 392
Target Start/End: Complemental strand, 27326124 - 27326047
Alignment:
Q  315 atttagaagctgaaaaatgtggtcacgcaactaaaatgcacgtgaccactattttttcatttagttaaccaaataaat 392  Q
    |||||||| || ||||||||||||||||||||||||| || ||||||||||||||| || || |||||| ||||||||    
T  27326124 atttagaaactaaaaaatgtggtcacgcaactaaaatacatgtgaccactatttttccagttggttaactaaataaat 27326047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 315 - 392
Target Start/End: Complemental strand, 27332361 - 27332284
Alignment:
Q  315 atttagaagctgaaaaatgtggtcacgcaactaaaatgcacgtgaccactattttttcatttagttaaccaaataaat 392  Q
    |||||||| || ||||||||||||||||||||||||| || ||||||||||||||| || || |||||| ||||||||    
T  27332361 atttagaaactaaaaaatgtggtcacgcaactaaaatacatgtgaccactatttttccagttggttaactaaataaat 27332284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 222 - 318
Target Start/End: Complemental strand, 31545810 - 31545714
Alignment:
Q  222 ttaatgtgtagatcattttataccactctcgaaaatttcaggtaactaaatatatggtctgtgtgaccaaattttttcagttgtatgaccactattt 318  Q
    ||||| |||| ||| |||| || ||||||  |||||||||||||||  |||||||||||| |||||||| ||||||| |||||| ||||||||||||    
T  31545810 ttaatatgtacatctttttgtatcactctgaaaaatttcaggtaacctaatatatggtctatgtgaccacatttttttagttgtgtgaccactattt 31545714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 315 - 392
Target Start/End: Complemental strand, 27365085 - 27365008
Alignment:
Q  315 atttagaagctgaaaaatgtggtcacgcaactaaaatgcacgtgaccactattttttcatttagttaaccaaataaat 392  Q
    |||||||| ||||||||||| |||||||| ||||||| |  ||||||||||||||| || ||| ||||||||||||||    
T  27365085 atttagaaactgaaaaatgtagtcacgcagctaaaatacgtgtgaccactatttttccacttaattaaccaaataaat 27365008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 242 - 300
Target Start/End: Complemental strand, 13359050 - 13358992
Alignment:
Q  242 taccactctcgaaaatttcaggtaactaaatatatggtctgtgtgaccaaattttttca 300  Q
    ||||||||| ||||||||||| ||| |||||||||||||||||||| || |||||||||    
T  13359050 taccactctggaaaatttcagttaattaaatatatggtctgtgtgatcatattttttca 13358992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 333 - 383
Target Start/End: Original strand, 23163787 - 23163837
Alignment:
Q  333 gtggtcacgcaactaaaatgcacgtgaccactattttttcatttagttaac 383  Q
    |||||||||||||||||||| ||||||||||||||| |||| |||||||||    
T  23163787 gtggtcacgcaactaaaatgtacgtgaccactatttcttcacttagttaac 23163837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 269 - 363
Target Start/End: Original strand, 41571810 - 41571904
Alignment:
Q  269 aaatatatggtctgtgtgaccaaattttttcagttgtatgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatgcacgtgaccac 363  Q
    ||||||||||| | ||| |||| ||||||||||||   ||||||||||||| ||| ||||||||||| |||| ||  ||||||| ||||||||||    
T  41571810 aaatatatggtatatgtaaccacattttttcagttacgtgaccactatttaaaagttgaaaaatgtgatcacacagttaaaatgtacgtgaccac 41571904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 341 - 393
Target Start/End: Original strand, 11501309 - 11501361
Alignment:
Q  341 gcaactaaaatgcacgtgaccactattttttcatttagttaaccaaataaatt 393  Q
    ||||||||||||  |||||||||||||||| || |||||||||||||||||||    
T  11501309 gcaactaaaatgtgcgtgaccactatttttccaattagttaaccaaataaatt 11501361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 199 - 262
Target Start/End: Original strand, 31545423 - 31545486
Alignment:
Q  199 agaataaagattgatagacacccttaatgtgtagatcattttataccactctcgaaaatttcag 262  Q
    ||||||||||||| |||||||| |||||||||| |||  ||| ||| |||||||||||||||||    
T  31545423 agaataaagattggtagacacctttaatgtgtatatccctttgtactactctcgaaaatttcag 31545486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 315
Target Start/End: Complemental strand, 19280400 - 19280298
Alignment:
Q  213 tagacacccttaatgtgtagatcattttataccactctcgaaaatttcaggtaactaaatatatggtctgtgtgaccaaattttttcagttgtatgacca 312  Q
    ||||||||||||||||||| | |  ||| |||||||||  ||| ||| || |||  |||||||||||||||||||| | ||||||| ||| || ||||||    
T  19280400 tagacacccttaatgtgtacacccgtttgtaccactctgaaaatttttagttaatcaaatatatggtctgtgtgacaacattttttaagtggtgtgacca 19280301  T
Q  313 cta 315  Q
    |||    
T  19280300 cta 19280298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 253 - 315
Target Start/End: Original strand, 26308586 - 26308648
Alignment:
Q  253 aaaatttcaggtaactaaatatatggtctgtgtgaccaaattttttcagttgtatgaccacta 315  Q
    ||||| |||| |||||||||||||||| |||||||||| ||| ||| |||||| |||||||||    
T  26308586 aaaatatcagttaactaaatatatggtttgtgtgaccacattgttttagttgtgtgaccacta 26308648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 327 - 393
Target Start/End: Original strand, 39126189 - 39126254
Alignment:
Q  327 aaaaatgtggtcacgcaactaaaatgcacgtgaccactattttttcatttagttaaccaaataaatt 393  Q
    ||||||||||| |||||||||||| || || || |||||||||| || |||||||||||||||||||    
T  39126189 aaaaatgtggttacgcaactaaaa-gcgcgcgatcactatttttccacttagttaaccaaataaatt 39126254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 242 - 315
Target Start/End: Original strand, 1705605 - 1705678
Alignment:
Q  242 taccactctcgaaaatttcaggtaactaaatatatggtctgtgtgaccaaattttttcagttgtatgaccacta 315  Q
    |||||||||  ||||||| || | |||||||||||||| |||||||  | ||||||| ||||||||||||||||    
T  1705605 taccactctgaaaaatttaagtttactaaatatatggtttgtgtgattatatttttttagttgtatgaccacta 1705678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 269 - 318
Target Start/End: Complemental strand, 22432477 - 22432428
Alignment:
Q  269 aaatatatggtctgtgtgaccaaattttttcagttgtatgaccactattt 318  Q
    |||||||||||||||||||| | ||||||| ||||| |||||||||||||    
T  22432477 aaatatatggtctgtgtgactacatttttttagttgcatgaccactattt 22432428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 315
Target Start/End: Complemental strand, 27040799 - 27040683
Alignment:
Q  199 agaataaagattgatagacacccttaatgtgtagatcattttataccactctcgaaaatttcaggtaactaaatatatggtctgtgtgaccaaatttttt 298  Q
    ||||||||||| | | ||||| || |||||||| ||   ||| ||| ||||| ||||||||| | |||| ||||||||| ||||||||| || | |||||    
T  27040799 agaataaagataggttgacactctcaatgtgtacattcctttgtactactctagaaaatttcggttaaccaaatatatgatctgtgtgatcacaattttt 27040700  T
Q  299 cagttgtatgaccacta 315  Q
    ||||||  |||||||||    
T  27040699 cagttgcgtgaccacta 27040683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 357 - 395
Target Start/End: Original strand, 11509989 - 11510027
Alignment:
Q  357 tgaccactattttttcatttagttaaccaaataaattct 395  Q
    ||||||||||||||||| ||||||||| |||||||||||    
T  11509989 tgaccactattttttcaattagttaactaaataaattct 11510027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 213 - 295
Target Start/End: Complemental strand, 18733677 - 18733595
Alignment:
Q  213 tagacacccttaatgtgtagatcattttataccactctcgaaaatttcaggtaactaaatatatggtctgtgtgaccaaattt 295  Q
    |||||||| |||||||||| | |  ||||||||| |||  ||||||| || |||||||||||||||| || ||||||| ||||    
T  18733677 tagacacctttaatgtgtacacccctttataccattctgaaaaatttaagttaactaaatatatggtatgggtgaccacattt 18733595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 253 - 305
Target Start/End: Complemental strand, 5342039 - 5341987
Alignment:
Q  253 aaaatttcaggtaactaaatatatggtctgtgtgaccaaattttttcagttgt 305  Q
    |||||||||| |||   ||||||||||||||||||||| ||||||| ||||||    
T  5342039 aaaatttcagttaatcgaatatatggtctgtgtgaccacatttttttagttgt 5341987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 107; Significance: 2e-53; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 207 - 401
Target Start/End: Original strand, 34490094 - 34490286
Alignment:
Q  207 gattgatagacacccttaatgtgtagatcattttataccactctcgaaaatttcaggtaactaaatatatggtctgtgtgaccaaattttttcagttgta 306  Q
    ||||| ||||||||||||||||||| ||| |||  ||||||| |  |||||||||| |||||||||||||||||||||||| || |||||||||||||||    
T  34490094 gattggtagacacccttaatgtgtatatcttttggtaccactatgtaaaatttcagttaactaaatatatggtctgtgtga-cacattttttcagttgta 34490192  T
Q  307 tgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatgcacgtgaccactattttttcatttagttaaccaaataaattctggaaaa 401  Q
    ||||||||||||||||||| ||||||||||||| |||| |||||||| | ||||||||||||||  | |||||||||||||||||||||| ||||    
T  34490193 tgaccactatttagaagctaaaaaatgtggtcatgcaa-taaaatgcgcatgaccactatttttctagttagttaaccaaataaattctgaaaaa 34490286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 200 - 401
Target Start/End: Original strand, 34364131 - 34364330
Alignment:
Q  200 gaataaagattgatagacacccttaatgtgtagatcattttataccactctcgaaaatttcaggtaactaaatatatggtctgtgtgaccaaattttttc 299  Q
    |||||||||| | | |||||| ||||| || | |||  ||| ||||||||| |||||||| || ||||||||||||||||||||||||||| |||||| |    
T  34364131 gaataaagataggttgacaccattaatatgcacatctatttgtaccactctggaaaatttaagttaactaaatatatggtctgtgtgaccatattttt-c 34364229  T
Q  300 agttgtatgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatgcacgtgaccactattttttcatttagttaaccaaataaattctggaa 399  Q
    |||||  || ||| |||||||||||||||| |||||||||| ||||||||||| |||||||||| ||||||||| ||||||||||||| |||||||||||    
T  34364230 agttgcgtggcca-tatttagaagctgaaacatgtggtcacacaactaaaatgaacgtgaccacaattttttcacttagttaaccaaaaaaattctggaa 34364328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 294 - 401
Target Start/End: Complemental strand, 29677202 - 29677095
Alignment:
Q  294 tttttcagttgtatgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatgcacgtgaccactattttttcatttagttaaccaaataaatt 393  Q
    |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| || |||||||||||||||||||    
T  29677202 tttttcagttgagtgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatgtgcgtgaccactatttttccacttagttaaccaaataaatt 29677103  T
Q  394 ctggaaaa 401  Q
    ||| ||||    
T  29677102 ctgaaaaa 29677095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 264 - 401
Target Start/End: Original strand, 25238439 - 25238575
Alignment:
Q  264 taactaaatatatggtctgtgtgaccaaattttttcagttgtatgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatgcacgtgaccac 363  Q
    |||||||||||||||||| | ||| ||||||||||||||||  ||||||||||||||||||| ||||||||||||||| || |||||||  ||| |||||    
T  25238439 taactaaatatatggtctatatgatcaaattttttcagttgcgtgaccactatttagaagctaaaaaatgtggtcacgtaa-taaaatgtgcgtaaccac 25238537  T
Q  364 tattttttcatttagttaaccaaataaattctggaaaa 401  Q
    ||||||| || |||||||||||||||||||||| ||||    
T  25238538 tatttttccacttagttaaccaaataaattctgaaaaa 25238575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 276 - 401
Target Start/End: Original strand, 42604192 - 42604317
Alignment:
Q  276 tggtctgtgtgaccaaattttttcagttgtatgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatgcacgtgaccactattttttcatt 375  Q
    |||| |||||||||| ||||||||||||| || ||||||||||||||||| |||| | ||||||  |||||||||||| |||||||||||||||| || |    
T  42604192 tggtatgtgtgaccacattttttcagttgcatcaccactatttagaagcttaaaagtatggtcatacaactaaaatgcgcgtgaccactatttttccact 42604291  T
Q  376 tagttaaccaaataaattctggaaaa 401  Q
    |||||||| |||||||||||| ||||    
T  42604292 tagttaacgaaataaattctgaaaaa 42604317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 277 - 394
Target Start/End: Complemental strand, 29167943 - 29167827
Alignment:
Q  277 ggtctgtgtgaccaaattttttcagttgtatgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatgcacgtgaccactattttttcattt 376  Q
    ||||||||| | || |||||||||||||  ||||||||||||||||||| |||||| ||||||||||| |||||||| | |||||||||||||| || ||    
T  29167943 ggtctgtgtaatcacattttttcagttgcgtgaccactatttagaagctaaaaaatatggtcacgcaa-taaaatgcgcatgaccactatttttccactt 29167845  T
Q  377 agttaaccaaataaattc 394  Q
    ||||||||||||||||||    
T  29167844 agttaaccaaataaattc 29167827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 257 - 392
Target Start/End: Original strand, 9468064 - 9468199
Alignment:
Q  257 tttcaggtaactaaatatatggtctgtgtgaccaaattttttcagttgtatgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatgcacg 356  Q
    |||||| |||| ||||||||||| |||||||||| |||||||||||||| |||||| |||||| |||||| |||||||| |||| ||||||||||| | |    
T  9468064 tttcagttaaccaaatatatggtatgtgtgaccatattttttcagttgtctgacca-tatttaaaagctgtaaaatgtgatcacacaactaaaatgtatg 9468162  T
Q  357 tgaccactattttt-tcatttagttaaccaaataaat 392  Q
    |||| |||||||||  || ||||||||||||||||||    
T  9468163 tgactactatttttgccacttagttaaccaaataaat 9468199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 203 - 391
Target Start/End: Complemental strand, 517623 - 517433
Alignment:
Q  203 taaagattgatagacacccttaatgtgtagatcattt---tataccactctcgaaaatttcaggtaactaaatatatggtctgtgtgaccaaattttttc 299  Q
    ||||||| |||||||| |||||||||||| |||||||   | || ||||||| ||||||| || |||| ||||||||| | ||||  |||| |||||| |    
T  517623 taaagatcgatagacatccttaatgtgtacatcatttatttgtatcactctcaaaaatttaagttaaccaaatatatgatatgtgcaaccacattttt-c 517525  T
Q  300 agttgtatgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatgcacgtgaccactattttttcatttagttaaccaaataaa 391  Q
    | |||  | ||||||||||||||| | |||||| || |||||||||||||||| || |||| |||||||||| | |||||||||||||||||    
T  517524 aattgcgtaaccactatttagaagttaaaaaatatgatcacgcaactaaaatgaacatgactactattttttaacttagttaaccaaataaa 517433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 200 - 401
Target Start/End: Original strand, 5831431 - 5831631
Alignment:
Q  200 gaataaagattgatagacacccttaatgtgtagatcattttataccactctcgaaaatttcaggtaactaaatatatggtctgtgtgaccaaattttttc 299  Q
    |||||||||||| |||||||  |||||| ||| | | |||| || || |||  ||||||| || |||||||| ||||||| ||||||| || ||||| |     
T  5831431 gaataaagattggtagacact-ttaatgagtacacccttttgtaacattctgaaaaattttagttaactaaagatatggtatgtgtgatcatattttgtt 5831529  T
Q  300 agttgtatgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatgcacgtgaccactattttttcatttagttaaccaaataaattctggaa 399  Q
     |||| |||||||||||||||||| | |||||| ||||| || |||||||||||   | ||||| |||||| || |||||||||||||||||||||||||    
T  5831530 tgttgcatgaccactatttagaagttaaaaaatatggtcccgtaactaaaatgcgtattaccacaatttttccacttagttaaccaaataaattctggaa 5831629  T
Q  400 aa 401  Q
    ||    
T  5831630 aa 5831631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 242 - 398
Target Start/End: Original strand, 38951844 - 38952003
Alignment:
Q  242 taccactctcgaaaatttcaggtaactaaatatatggtctgtgtgaccaaatttttt-cagttgtatgaccactatttagaagctgaaaaa--tgtggtc 338  Q
    |||||||||||||||||| || |||| ||||||||||||| ||  |||| ||||||| ||| ||  |||||||||||||||| ||||||||  | | |||    
T  38951844 taccactctcgaaaatttaagttaaccaaatatatggtctatgaaaccacatttttttcagctgcgtgaccactatttagaaactgaaaaaaatatagtc 38951943  T
Q  339 acgcaactaaaatgcacgtgaccactattttttcatttagttaaccaaataaattctgga 398  Q
    |||||||||||||||   ||||||||||||||  | ||||||||||||||||||| ||||    
T  38951944 acgcaactaaaatgcgtctgaccactatttttctacttagttaaccaaataaattttgga 38952003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 213 - 318
Target Start/End: Original strand, 13350894 - 13350999
Alignment:
Q  213 tagacacccttaatgtgtagatcattttataccactctcgaaaatttcaggtaactaaatatatggtctgtgtgaccaaattttttcagttgtatgacca 312  Q
    |||||| |||||||||||| | | |||| ||||||||||||||||||||| |||| ||||||||||| ||||||| ||  |||||||||||| ||| | |    
T  13350894 tagacatccttaatgtgtacacccttttgtaccactctcgaaaatttcagttaaccaaatatatggtatgtgtgatcacgttttttcagttgcatggcta 13350993  T
Q  313 ctattt 318  Q
    ||||||    
T  13350994 ctattt 13350999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 315 - 391
Target Start/End: Original strand, 2996025 - 2996101
Alignment:
Q  315 atttagaagctgaaaaatgtggtcacgcaactaaaatgcacgtgaccactattttttcatttagttaaccaaataaa 391  Q
    |||||||||||||||||||||||||||||| |||||||| |||| || |||||||| |  |||||||||||||||||    
T  2996025 atttagaagctgaaaaatgtggtcacgcaaataaaatgcgcgtggccgctatttttccgcttagttaaccaaataaa 2996101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 200 - 392
Target Start/End: Original strand, 5855005 - 5855205
Alignment:
Q  200 gaataaagattgatagacacccttaatgtgtagatcattttataccactctcgaaaatttcaggtaactaaatatatggtctgtgtgaccaaattttttc 299  Q
    |||||||||| | ||||||| |||||||| || |||  ||| ||| ||| |  |||||||||| |||| |||||||||||||||||||||| || |||||    
T  5855005 gaataaagataggtagacacgcttaatgtttacatccctttgtactact-tgaaaaatttcagctaaccaaatatatggtctgtgtgaccacatattttc 5855103  T
Q  300 agttgtatgaccac-----------tatttagaagctgaaaaatgtggtcacgcaactaaaatgcacgtgaccactattttttcatttagttaaccaaat 388  Q
    |||||| |||||||            ||||| ||||| ||| |||||||||| ||||||||||  |||||||  |||||||| |||||| ||||||||||    
T  5855104 agttgtgtgaccacaatttttccaacatttaaaagctaaaatatgtggtcacacaactaaaat--acgtgacgtctatttttccatttaattaaccaaat 5855201  T
Q  389 aaat 392  Q
    ||||    
T  5855202 aaat 5855205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 213 - 315
Target Start/End: Complemental strand, 34490391 - 34490289
Alignment:
Q  213 tagacacccttaatgtgtagatcattttataccactctcgaaaatttcaggtaactaaatatatggtctgtgtgaccaaattttttcagttgtatgacca 312  Q
    ||||||| ||||||||||| | || ||| |||||||||  |||||||||| | || |||||||||||||||||||||| ||||||| |||||  ||||||    
T  34490391 tagacactcttaatgtgtacaccactttgtaccactctgaaaaatttcagtttacaaaatatatggtctgtgtgaccacatttttttagttgcgtgacca 34490292  T
Q  313 cta 315  Q
    |||    
T  34490291 cta 34490289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 253 - 353
Target Start/End: Complemental strand, 9929935 - 9929836
Alignment:
Q  253 aaaatttcaggtaactaaatatatggtctgtgtgaccaaattttttcagttgtatgaccactatttagaagctgaaaa-atgtggtcacgcaactaaaat 351  Q
    |||||||||  ||||||||||||||||||||||||||| ||||||||| |||  ||||||||||||     | ||||| |||||||||||||||||||||    
T  9929935 aaaatttcaattaactaaatatatggtctgtgtgaccacattttttcatttgcgtgaccactattt--tttcagaaaatatgtggtcacgcaactaaaat 9929838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 269 - 316
Target Start/End: Complemental strand, 38244848 - 38244801
Alignment:
Q  269 aaatatatggtctgtgtgaccaaattttttcagttgtatgaccactat 316  Q
    |||||||||||||||||||||| |||||||||||||  ||||||||||    
T  38244848 aaatatatggtctgtgtgaccacattttttcagttgcgtgaccactat 38244801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 355 - 401
Target Start/End: Original strand, 2569961 - 2570007
Alignment:
Q  355 cgtgaccactattttttcatttagttaaccaaataaattctggaaaa 401  Q
    |||||||||||||||| || ||||||||||||||||||||| |||||    
T  2569961 cgtgaccactatttttccacttagttaaccaaataaattctagaaaa 2570007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 253 - 315
Target Start/End: Complemental strand, 5831695 - 5831633
Alignment:
Q  253 aaaatttcaggtaactaaatatatggtctgtgtgaccaaattttttcagttgtatgaccacta 315  Q
    |||||||||  |||| |||||||||||||||||||||| ||||||| |||||  |||||||||    
T  5831695 aaaatttcaattaaccaaatatatggtctgtgtgaccatatttttttagttgcgtgaccacta 5831633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 253 - 315
Target Start/End: Original strand, 29167757 - 29167818
Alignment:
Q  253 aaaatttcaggtaactaaatatatggtctgtgtgaccaaattttttcagttgtatgaccacta 315  Q
    |||||||||| |||||||||||||||| |||||||||| ||||||| |||||  |||||||||    
T  29167757 aaaatttcagttaactaaatatatggtttgtgtgaccacatttttt-agttgcctgaccacta 29167818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 253 - 318
Target Start/End: Original strand, 29677032 - 29677096
Alignment:
Q  253 aaaatttcaggtaactaaatatatggtctgtgtgaccaaattttttcagttgtatgaccactattt 318  Q
    ||||||| || |||| |||||||||| ||||||||||| ||||||| ||||| |||||||||||||    
T  29677032 aaaattttagttaaccaaatatatggcctgtgtgaccacatttttt-agttgcatgaccactattt 29677096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 237 - 319
Target Start/End: Complemental strand, 5855283 - 5855201
Alignment:
Q  237 ttttataccactctcgaaaatttcaggtaactaaatatatggtctgtgtgaccaaattttttcagttgtatgaccactattta 319  Q
    |||| |||||||||  ||||||| || |||| ||||||||||| |||||||||| ||||  | |||||  |||||||||||||    
T  5855283 ttttgtaccactctgaaaaatttaagttaaccaaatatatggtatgtgtgaccacatttagttagttgcgtgaccactattta 5855201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 318
Target Start/End: Original strand, 24708074 - 24708123
Alignment:
Q  269 aaatatatggtctgtgtgaccaaattttttcagttgtatgaccactattt 318  Q
    |||||||||||||||||||||| ||||||| || ||  ||||||||||||    
T  24708074 aaatatatggtctgtgtgaccacattttttaaggtgcgtgaccactattt 24708123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 253 - 318
Target Start/End: Complemental strand, 38952070 - 38952005
Alignment:
Q  253 aaaatttcaggtaactaaatatatggtctgtgtgaccaaattttttcagttgtatgaccactattt 318  Q
    |||||||||| |||| |||| |||||| | |||||||| ||||||| |||||  ||||||||||||    
T  38952070 aaaatttcagttaacaaaatgtatggtatatgtgaccatatttttttagttgcttgaccactattt 38952005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 242 - 318
Target Start/End: Complemental strand, 2570082 - 2570006
Alignment:
Q  242 taccactctcgaaaatttcaggtaactaaatatatggtctgtgtgaccaaattttttcagttgtatgaccactattt 318  Q
    |||| |||| |||||||| || |||| || |||||||| ||||| |||| ||||||| |||||  ||||||||||||    
T  2570082 taccgctctggaaaatttaagttaaccaagtatatggtttgtgttaccatattttttgagttgcgtgaccactattt 2570006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 269 - 317
Target Start/End: Original strand, 17227500 - 17227548
Alignment:
Q  269 aaatatatggtctgtgtgaccaaattttttcagttgtatgaccactatt 317  Q
    |||||||||||||||||||||| ||||||| || ||  |||||||||||    
T  17227500 aaatatatggtctgtgtgaccacattttttaaggtgcgtgaccactatt 17227548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 298
Target Start/End: Complemental strand, 28499720 - 28499644
Alignment:
Q  222 ttaatgtgtagatcattttataccactctcgaaaatttcaggtaactaaatatatggtctgtgtgaccaaatttttt 298  Q
    |||| ||||| |||||||| ||||| |||  |||||||||| |||| |||||||||||| |  |||||| |||||||    
T  28499720 ttaacgtgtacatcattttgtaccattctaaaaaatttcagttaaccaaatatatggtccggatgaccacatttttt 28499644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 95; Significance: 2e-46; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 195 - 401
Target Start/End: Original strand, 13312492 - 13312697
Alignment:
Q  195 gcaaagaataaagattgatagacacccttaatgtgtagatcattttataccactctcgaaaatttcaggtaactaaatatatggtctgtgtgaccaaatt 294  Q
    ||||| ||||||||||| |||| ||| |||||||||| | | |||| ||| | | ||||||||||||  |||| ||||||||||||| ||||| || |||    
T  13312492 gcaaacaataaagattggtagatacctttaatgtgtacacccttttgtactattttcgaaaatttcaattaaccaaatatatggtctatgtgaacacatt 13312591  T
Q  295 ttttcagttgtatgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatgcacgtgaccactattttttcatttagttaaccaaataaattc 394  Q
    || |||||||  ||||| ||||||||||||||||||||||||||||||||||||||||| |||| | ||||||||| || |||||||||||||||||||     
T  13312592 tt-tcagttgggtgaccgctatttagaagctgaaaaatgtggtcacgcaactaaaatgcgcgtggcaactatttttccacttagttaaccaaataaatta 13312690  T
Q  395 tggaaaa 401  Q
    |||||||    
T  13312691 tggaaaa 13312697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 206 - 393
Target Start/End: Original strand, 22169361 - 22169548
Alignment:
Q  206 agattgatagacacccttaatgtgtagatcattttataccactctcgaaaatttcaggtaactaaatatatggtctgtgtgaccaaattttttcagttgt 305  Q
    |||||| ||||||||||||||||||| | | | || || || | | ||||||||||| |||||||||||||||  | ||||| || |||||||||||||     
T  22169361 agattggtagacacccttaatgtgtacaccctattgtatcatttttgaaaatttcagttaactaaatatatggaatatgtgatcacattttttcagttgc 22169460  T
Q  306 atgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatgcacgtgaccactattttttcatttagttaaccaaataaatt 393  Q
     ||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||||||||||  |  ||||||||||||||||||    
T  22169461 gtgaccactatttataagttgaaaaatgtggtcacgcaactaaaatgcgcgtgaccactatttttcaacgtagttaaccaaataaatt 22169548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 199 - 401
Target Start/End: Complemental strand, 43461912 - 43461711
Alignment:
Q  199 agaataaagattgatagacacccttaatgtgtagatcattttataccactctcgaaaatttcaggtaactaaatatatggtctgtgtgaccaaatttttt 298  Q
    ||||||||||| | ||||||| ||||||||||  | |  ||| || |||| | ||||||||||| |||  ||||||||||||| || ||||| |||||||    
T  43461912 agaataaagataggtagacactcttaatgtgtgtacccctttgtagcacttttgaaaatttcagttaatcaaatatatggtctttg-gaccatatttttt 43461814  T
Q  299 cagttgtatgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatgcacgtgaccactattttttcatttagttaaccaaataaattctgga 398  Q
    ||||||| ||||||||||||||||| ||||||||  ||||||||||||||||| ||||| |||||||||||| || ||||| |||||||||||||||| |    
T  43461813 cagttgtgtgaccactatttagaagttgaaaaatacggtcacgcaactaaaattcacgtaaccactatttttccacttagtaaaccaaataaattctgaa 43461714  T
Q  399 aaa 401  Q
    |||    
T  43461713 aaa 43461711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 264 - 401
Target Start/End: Complemental strand, 38522114 - 38521978
Alignment:
Q  264 taactaaatatatggtctgtgtgaccaaattttttcagttgtatgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatgcacgtgaccac 363  Q
    |||| ||||||||||||| |||||||| ||||||||| ||| ||||||||||||||||||||||||||||||||||||| | |||||||| |||||||||    
T  38522114 taaccaaatatatggtctatgtgaccacattttttcaattgcatgaccactatttagaagctgaaaaatgtggtcacgcga-taaaatgcgcgtgaccac 38522016  T
Q  364 tattttttcatttagttaaccaaataaattctggaaaa 401  Q
    ||||||| || ||||||||| ||||||||||| |||||    
T  38522015 tatttttacacttagttaactaaataaattctagaaaa 38521978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 199 - 400
Target Start/End: Original strand, 31189473 - 31189675
Alignment:
Q  199 agaataaagattgatagacacccttaatgtgtagatcattttataccactctcgaaaatttcaggtaactaaatatatggtctgtgtgaccaaatttt-- 296  Q
    |||||||||||||  ||||||| ||||| |||| | |||||| ||||||||||||||||||||| |||| |||||||| || |||||||||| |||||      
T  31189473 agaataaagattggcagacacctttaatatgtacaacattttgtaccactctcgaaaatttcagttaaccaaatatatagtatgtgtgaccacatttttg 31189572  T
Q  297 ttcagttgtatgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatgcacgtgaccactattttttcatttagttaaccaaataaattctg 396  Q
    | || ||| ||||  |||||||||||||||||||||||| ||||||||||||||||   |||||||||| |||| || || ||||| |||||||||||||    
T  31189573 tccaattgcatgattactatttagaagctgaaaaatgtgatcacgcaactaaaatgtttgtgaccacta-ttttccacttggttaatcaaataaattctg 31189671  T
Q  397 gaaa 400  Q
    ||||    
T  31189672 gaaa 31189675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 201 - 401
Target Start/End: Complemental strand, 33959189 - 33958990
Alignment:
Q  201 aataaagattgatagacacccttaatgtgtagatcattttataccactctcgaaaatttcaggtaactaaatatatggtctgtgtgaccaaattttttca 300  Q
    ||||||||||  ||||||||||||||||||| ||   ||||||||| ||||||||| ||||| |||| ||||||||  ||| |||||  | |||||||||    
T  33959189 aataaagattagtagacacccttaatgtgtatattcctttataccattctcgaaaacttcagttaacaaaatatata-tctatgtgattacattttttca 33959091  T
Q  301 gttgtatgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatgcacgtgaccactattttttcatttagttaaccaaataaattctggaaa 400  Q
    | ||  |||||||||||||||| ||||||||| |||||||||||||||||| |  || |||||||||||| || |||||| |||||||||||||||||||    
T  33959090 gctgcgtgaccactatttagaaactgaaaaatatggtcacgcaactaaaatccgagtaaccactatttttccacttagttgaccaaataaattctggaaa 33958991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 292 - 401
Target Start/End: Original strand, 35922722 - 35922831
Alignment:
Q  292 attttttcagttgtatgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatgcacgtgaccactattttttcatttagttaaccaaataaa 391  Q
    |||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||| ||||||||||||||||||||    
T  35922722 attttttcagttgcgtgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatgcgtatgaccactatttttccatttagttaaccaaataaa 35922821  T
Q  392 ttctggaaaa 401  Q
    ||||| ||||    
T  35922822 ttctgaaaaa 35922831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 197 - 350
Target Start/End: Complemental strand, 36169546 - 36169394
Alignment:
Q  197 aaagaataaagattgatagacacccttaatgtgtagatcattttataccactctcgaaaatttcaggtaactaaatatatggtctgtgtgaccaaatttt 296  Q
    ||||||||||||||| |||||| | ||||||| || ||| ||||| ||||||||| |||||||||| | |  ||||||||||| |||||||||| ||| |    
T  36169546 aaagaataaagattgctagacatctttaatgtatacatc-ttttacaccactctcaaaaatttcagctgatcaaatatatggtatgtgtgaccacattct 36169448  T
Q  297 ttcagttgtatgaccactatttagaagctgaaaaatgtggtcacgcaactaaaa 350  Q
    ||||||||  |||||||||||||||||||||||||| |||||||||||||||||    
T  36169447 ttcagttgcgtgaccactatttagaagctgaaaaatatggtcacgcaactaaaa 36169394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 317 - 401
Target Start/End: Original strand, 42034771 - 42034855
Alignment:
Q  317 ttagaagctgaaaaatgtggtcacgcaactaaaatgcacgtgaccactattttttcatttagttaaccaaataaattctggaaaa 401  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| |||||||    
T  42034771 ttagaagctgaaaaatgtggtcacgcaactaaaatgcacgtgaccactatttttccacttagttaaccaaataaattttggaaaa 42034855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 253 - 401
Target Start/End: Complemental strand, 19621630 - 19621483
Alignment:
Q  253 aaaatttcaggtaactaaatatatggtctgtgtgaccaaattttttcagttgtatgaccactattt----agaagctgaaaaatgtggtcacgcaactaa 348  Q
    |||||||||| |||| ||||||||||| |||||||||| |||||| || |||  ||||||||||||    ||||     |||| ||||||||||||||||    
T  19621630 aaaatttcagttaaccaaatatatggtatgtgtgaccacatttttccatttgcgtgaccactatttttccagaa-----aaaacgtggtcacgcaactaa 19621536  T
Q  349 aatgcacgtgaccactattttttcatttagttaaccaaataaattctggaaaa 401  Q
    ||||  |||||||||||||||| || |||||||||||||||||||||||||||    
T  19621535 aatgtgcgtgaccactatttttccacttagttaaccaaataaattctggaaaa 19621483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 200 - 389
Target Start/End: Complemental strand, 43262911 - 43262708
Alignment:
Q  200 gaataaagattgatagacacccttaatgtgtagatcattttataccactctcgaaaatttcaggtaactaaatatatggtctgtgtgaccaaattttttc 299  Q
    ||||||||||   ||||||||||||||||||| | |  ||| ||| ||| |  |||||||||| |||| |||||||||||||||||||||| |||| ||     
T  43262911 gaataaagataagtagacacccttaatgtgtacacccctttgtactactttgaaaaatttcagttaaccaaatatatggtctgtgtgaccacatttgttt 43262812  T
Q  300 agttgtatgaccactattt-----------agaagctgaa---aaatgtggtcacgcaactaaaatgcacgtgaccactattttttcatttagttaacca 385  Q
    |||| | |||| |||||||           | ||||||||   |||||||||||| |||||||||||| |||||||||||||||| || |||||||||||    
T  43262811 agttatgtgactactatttttccaacatttaaaagctgaagaaaaatgtggtcacacaactaaaatgcgcgtgaccactatttttccacttagttaacca 43262712  T
Q  386 aata 389  Q
    ||||    
T  43262711 aata 43262708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 222 - 392
Target Start/End: Original strand, 7156000 - 7156182
Alignment:
Q  222 ttaatgtgtagatcattttataccactctcgaaaatttcaggtaactaaatatatggtctgtgtgaccaaattttttcagttgtatgaccactattt--- 318  Q
    |||||||||| ||| |||| ||||||| | ||||||||||| |||  ||||||||||| | | ||| || |||||||||||| ||||||||||||||       
T  7156000 ttaatgtgtacatctttttgtaccactttagaaaatttcagttaatcaaatatatggtttatatgatcacattttttcagttatatgaccactatttttt 7156099  T
Q  319 ---------agaagctgaaaaatgtggtcacgcaactaaaatgcacgtgaccactattttttcatttagttaaccaaataaat 392  Q
             ||||||||||||||||| || ||||||||||||   |||||||| ||||||| || ||| ||||||||||||||    
T  7156100 tcagaatttagaagctgaaaaatgtgatcgcgcaactaaaatatgcgtgaccattatttttccacttaattaaccaaataaat 7156182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 315 - 392
Target Start/End: Complemental strand, 30704476 - 30704398
Alignment:
Q  315 atttagaagctgaaaaa-tgtggtcacgcaactaaaatgcacgtgaccactattttttcatttagttaaccaaataaat 392  Q
    ||||| ||||||||||| ||||||| | |||||||||||| |||||||||||||||| || ||||||||||||||||||    
T  30704476 atttaaaagctgaaaaaatgtggtcgcacaactaaaatgcgcgtgaccactatttttccacttagttaaccaaataaat 30704398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 253 - 318
Target Start/End: Complemental strand, 15221727 - 15221662
Alignment:
Q  253 aaaatttcaggtaactaaatatatggtctgtgtgaccaaattttttcagttgtatgaccactattt 318  Q
    |||||||||| ||||||||||||||||||||||||||| ||||||| | |||| ||||||||||||    
T  15221727 aaaatttcagttaactaaatatatggtctgtgtgaccacatttttttaattgtgtgaccactattt 15221662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 339 - 394
Target Start/End: Original strand, 30045885 - 30045940
Alignment:
Q  339 acgcaactaaaatgcacgtgaccactattttttcatttagttaaccaaataaattc 394  Q
    ||||||||||||| | |||||||||||||||| |||||| ||||||||||||||||    
T  30045885 acgcaactaaaatacgcgtgaccactatttttccatttaattaaccaaataaattc 30045940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 298
Target Start/End: Original strand, 35922607 - 35922704
Alignment:
Q  201 aataaagattgatagacacccttaatgtgtagatcattttataccactctcgaaaatttcaggtaactaaatatatggtctgtgtgaccaaatttttt 298  Q
    ||||||||| | ||||||| ||||||||||| |||  ||| || ||||||  |||||||||| |||  ||||||||||| |||||||||| |||||||    
T  35922607 aataaagatcggtagacacacttaatgtgtacatccctttgtatcactctgaaaaatttcagttaatcaaatatatggtatgtgtgaccacatttttt 35922704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 213 - 318
Target Start/End: Complemental strand, 13312797 - 13312696
Alignment:
Q  213 tagacacccttaatgtgtagatcattttataccactctcgaaaatttcaggtaactaaatatatggtctgtgtgaccaaattttttcagttgtatgacca 312  Q
    |||||||||||||||||||     |||| |||||||||  |||||||||| |||| | ||||||| | |||||||||| ||||||| |||||  ||||||    
T  13312797 tagacacccttaatgtgtac----ttttgtaccactctgaaaaatttcagttaaccatatatatgatttgtgtgaccacatttttttagttgcgtgacca 13312702  T
Q  313 ctattt 318  Q
    ||||||    
T  13312701 ctattt 13312696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 253 - 318
Target Start/End: Complemental strand, 35922895 - 35922830
Alignment:
Q  253 aaaatttcaggtaactaaatatatggtctgtgtgaccaaattttttcagttgtatgaccactattt 318  Q
    ||||||| || |||| |||| ||||||||||| ||||| ||||||| ||||| |||||||||||||    
T  35922895 aaaatttaagttaaccaaatttatggtctgtgggaccatattttttaagttgcatgaccactattt 35922830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 271 - 319
Target Start/End: Complemental strand, 7156226 - 7156178
Alignment:
Q  271 atatatggtctgtgtgaccaaattttttcagttgtatgaccactattta 319  Q
    |||||||||| ||||||||| ||||||| |||||| |||||||||||||    
T  7156226 atatatggtccgtgtgaccacatttttttagttgtgtgaccactattta 7156178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 318
Target Start/End: Original strand, 33958887 - 33958991
Alignment:
Q  213 tagacacccttaatgtgtagatcattttataccactctcgaaaatttcaggtaactaaatatatggtctgtgtgaccaaattttttcagttgtatgacca 312  Q
    |||||||||||||| |||| ||| |||  |||||||||  |||||||||  |||| ||||||||||||| ||| | || ||||||| || || |||||||    
T  33958887 tagacacccttaatatgtatatcctttg-taccactctgaaaaatttcacttaaccaaatatatggtctatgtaatcacatttttttagctgcatgacca 33958985  T
Q  313 ctattt 318  Q
    | ||||    
T  33958986 caattt 33958991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 242 - 290
Target Start/End: Original strand, 15221576 - 15221624
Alignment:
Q  242 taccactctcgaaaatttcaggtaactaaatatatggtctgtgtgacca 290  Q
    ||||| |||||||||||| || |||| ||||||||||| ||||||||||    
T  15221576 taccattctcgaaaattttagttaaccaaatatatggtttgtgtgacca 15221624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1126 (Bit Score: 93; Significance: 4e-45; HSPs: 1)
Name: scaffold1126
Description:

Target: scaffold1126; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 198 - 390
Target Start/End: Complemental strand, 422 - 230
Alignment:
Q  198 aagaataaagattgatagacacccttaatgtgtagatcattttataccactctcgaaaatttcaggtaactaaatatatggtctgtgtgaccaaattttt 297  Q
    ||||| ||| |||| || ||||||||||| |||| |||  ||| |||||||||  ||| |||||| |||| |||||||||||||||||| ||| | ||||    
T  422 aagaacaaaaattggtaaacacccttaatttgtacatctctttgtaccactctgaaaattttcagttaaccaaatatatggtctgtgtggccacactttt 323  T
Q  298 tcagttgtatgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatgcacgtgaccactattttttcatttagttaaccaaataa 390  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| || ||| ||| ||||||||    
T  322 tcagttgcgtgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatgcgcatgaccactatttttccacttacttatccaaataa 230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 79; Significance: 8e-37; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 201 - 395
Target Start/End: Complemental strand, 10825 - 10631
Alignment:
Q  201 aataaagattgatagacacccttaatgtgtagatcattttataccactctcgaaaatttcaggtaactaaatatatggtctgtgtgaccaaattttttca 300  Q
    ||||||||| | || ||| ||||||| |||| ||   ||| ||||||||| ||||||||||  |||| |||||||||||||  ||||| | ||||||| |    
T  10825 aataaagataggtaaacatccttaatatgtacattcctttgtaccactctagaaaatttcaattaaccaaatatatggtctaggtgactatattttttaa 10726  T
Q  301 gttgtatgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatgcacgtgaccactattttttcatttagttaaccaaataaattct 395  Q
    |||| |||||||||||||| ||  | ||||||||||||||||||||||||| | |||||||| ||||||| || |||||||||||||||||||||    
T  10725 gttgcatgaccactatttaaaaaataaaaaatgtggtcacgcaactaaaatacccgtgaccattatttttccacttagttaaccaaataaattct 10631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 66; Significance: 5e-29; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 198 - 342
Target Start/End: Complemental strand, 21691 - 21549
Alignment:
Q  198 aagaataaagattgatagacacccttaatgtgtagatcattttataccactctcgaaaatttcaggtaactaaatatatggtctgtgtgaccaaattttt 297  Q
    |||||||||||||| |||||||| |||||||||| |    ||| | ||||| | |||||| |||| ||||  ||||||||||||||||||||| ||||||    
T  21691 aagaataaagattggtagacacctttaatgtgtacacg--tttgtgccactttagaaaatctcagttaaccgaatatatggtctgtgtgaccacattttt 21594  T
Q  298 tcagttgtatgaccactatttagaagctgaaaaatgtggtcacgc 342  Q
    |||||||  |||||||||| |||||||||||||||||||||||||    
T  21593 tcagttgcgtgaccactatatagaagctgaaaaatgtggtcacgc 21549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 64; Significance: 7e-28; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 278 - 401
Target Start/End: Complemental strand, 24153 - 24031
Alignment:
Q  278 gtctgtgtgaccaaattttttcagttgtatgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatgcacgtgaccactattttttcattta 377  Q
    |||| |||||| | ||||||||||||| |||||||||||||||||||| ||||||||||| |||| | |||||||| |||||||||||||||| || |||    
T  24153 gtctatgtgactacattttttcagttgcatgaccactatttagaagctaaaaaatgtggttacgc-attaaaatgcgcgtgaccactatttttccactta 24055  T
Q  378 gttaaccaaataaattctggaaaa 401  Q
     || ||||||||||||||| ||||    
T  24054 ttttaccaaataaattctgaaaaa 24031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 58; Significance: 3e-24; HSPs: 2)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 315 - 392
Target Start/End: Original strand, 87035 - 87112
Alignment:
Q  315 atttagaagctgaaaaatgtggtcacgcaactaaaatgcacgtgaccactattttttcatttagttaaccaaataaat 392  Q
    |||||||| |||||||||||||||||||||||||||| ||||||||||||||||||  | ||||||||||||||||||    
T  87035 atttagaaactgaaaaatgtggtcacgcaactaaaatacacgtgaccactatttttctacttagttaaccaaataaat 87112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 200 - 318
Target Start/End: Original strand, 86873 - 86991
Alignment:
Q  200 gaataaagattgatagacacccttaatgtgtagatcattttataccactctcgaaaatttcaggtaactaaatatatggtctgtgtgaccaaattttttc 299  Q
    |||||| ||||| || |||  ||||||||||| | |  ||| ||||| ||| ||||| ||||  |||  |||||||| || |||||||||| ||||||||    
T  86873 gaataatgattggtaaacattcttaatgtgtacacccctttctaccattctagaaaacttcaattaatcaaatatatagtttgtgtgaccacattttttc 86972  T
Q  300 agttgtatgaccactattt 318  Q
     ||||| ||||||||||||    
T  86973 ggttgtgtgaccactattt 86991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 315 - 392
Target Start/End: Original strand, 112158 - 112235
Alignment:
Q  315 atttagaagctgaaaaatgtggtcacgcaactaaaatgcacgtgaccactattttttcatttagttaaccaaataaat 392  Q
    ||||||||||||||||| |||||||||||| ||||||||||||||||||||||||| || ||||||||| ||||||||    
T  112158 atttagaagctgaaaaacgtggtcacgcaattaaaatgcacgtgaccactatttttccacttagttaactaaataaat 112235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 315 - 392
Target Start/End: Original strand, 5870 - 5947
Alignment:
Q  315 atttagaagctgaaaaatgtggtcacgcaactaaaatgcacgtgaccactattttttcatttagttaaccaaataaat 392  Q
    ||||| |||||||||| ||||||  |||||||||||| | |||||||||||||||| || ||| ||||||||||||||    
T  5870 atttaaaagctgaaaagtgtggtgtcgcaactaaaatacgcgtgaccactatttttgcacttaattaaccaaataaat 5947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 36; Significance: 0.00000000004; HSPs: 2)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 254 - 317
Target Start/End: Complemental strand, 24995 - 24932
Alignment:
Q  254 aaatttcaggtaactaaatatatggtctgtgtgaccaaattttttcagttgtatgaccactatt 317  Q
    ||||||||| || | |||||||| ||||||||||||| || ||||||||||| |||||||||||    
T  24995 aaatttcagttagccaaatatatagtctgtgtgaccacatgttttcagttgtgtgaccactatt 24932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 252 - 318
Target Start/End: Complemental strand, 25416 - 25350
Alignment:
Q  252 gaaaatttcaggtaactaaatatatggtctgtgtgaccaaattttttcagttgtatgaccactattt 318  Q
    |||||||| || |||| ||||||||||||||| | |||| ||||||  |||||||||||||||||||    
T  25416 gaaaattttagttaaccaaatatatggtctgtataaccacatttttaaagttgtatgaccactattt 25350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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