View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20706_high_44 (Length: 307)
Name: NF20706_high_44
Description: NF20706
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20706_high_44 |
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Alignment Details
Target: chr7 (Bit Score: 255; Significance: 1e-142; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 29 - 298
Target Start/End: Complemental strand, 44039195 - 44038925
Alignment:
| Q |
29 |
agagaatctattcatcaataacggagagaattgaagcagttagttccttt-atcttatttggattttctctaacccactactaaaacatgcattggttat |
127 |
Q |
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| T |
44039195 |
agagaatctattcatcaataacggagagaattgaagcagttagttccttttatcttatttgtattttctctaacccactactaaaacatgcattggttat |
44039096 |
T |
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| Q |
128 |
gtgaactagagaaagcacgctcatgctctttcgaaggttgaaagctcttttaaatccgaagattctggtttgcgtttgtaaccctctgtatttgttattc |
227 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44039095 |
gtgaactagagaaagcacgctcatgctctttcgaaggttgaaagctcttttaaatccgaagattctggtttgcgtttgtaaccctctgtatttgttattc |
44038996 |
T |
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| Q |
228 |
gaacacataaatcaaagctaaaacattgaccaatttttagttttgtccaactttgattattccagaataat |
298 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
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| T |
44038995 |
gaacacataaatcaaagctaaaacattgaccaatttttagttttctccaactttgattattccagaataat |
44038925 |
T |
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