View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20706_low_30 (Length: 369)

Name: NF20706_low_30
Description: NF20706
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20706_low_30
NF20706_low_30
[»] chr1 (46 HSPs)
chr1 (168-361)||(9783858-9784051)
chr1 (15-170)||(9784098-9784249)
chr1 (15-170)||(21718287-21718441)
chr1 (168-350)||(35522156-35522339)
chr1 (168-356)||(22402908-22403097)
chr1 (31-170)||(35054830-35054969)
chr1 (168-353)||(35055016-35055202)
chr1 (16-170)||(49967710-49967863)
chr1 (168-350)||(21718488-21718670)
chr1 (168-349)||(49967910-49968092)
chr1 (229-361)||(51627457-51627589)
chr1 (35-170)||(22403144-22403279)
chr1 (168-356)||(27329563-27329753)
chr1 (30-169)||(41212145-41212283)
chr1 (226-356)||(20346342-20346472)
chr1 (15-91)||(35522432-35522507)
chr1 (16-152)||(51627716-51627851)
chr1 (31-168)||(27329792-27329928)
chr1 (168-253)||(41212331-41212415)
chr1 (229-349)||(36356096-36356217)
chr1 (49-165)||(20177267-20177383)
chr1 (168-266)||(19603357-19603455)
chr1 (186-347)||(22829232-22829395)
chr1 (30-156)||(16656711-16656837)
chr1 (30-167)||(16645985-16646122)
chr1 (186-301)||(20955292-20955409)
chr1 (124-170)||(35522386-35522432)
chr1 (31-91)||(15861547-15861607)
chr1 (229-331)||(20893479-20893582)
chr1 (16-156)||(37233908-37234047)
chr1 (35-91)||(21860089-21860145)
chr1 (229-349)||(37844284-37844405)
chr1 (31-91)||(44035092-44035152)
chr1 (229-266)||(16646235-16646272)
chr1 (229-266)||(16656961-16656998)
chr1 (31-91)||(22367093-22367152)
chr1 (15-66)||(9784238-9784288)
chr1 (229-349)||(38033476-38033598)
chr1 (309-356)||(41212421-41212467)
chr1 (186-261)||(17609205-17609282)
chr1 (244-349)||(20913351-20913459)
chr1 (319-349)||(21860427-21860457)
chr1 (319-349)||(41218821-41218851)
chr1 (319-349)||(44034780-44034810)
chr1 (283-351)||(20177553-20177622)
chr1 (206-260)||(37233754-37233810)
[»] chr3 (115 HSPs)
chr3 (168-361)||(8632050-8632243)
chr3 (168-352)||(14527881-14528067)
chr3 (168-356)||(35123955-35124144)
chr3 (168-350)||(50111855-50112038)
chr3 (15-170)||(12349573-12349727)
chr3 (168-357)||(3578348-3578540)
chr3 (168-352)||(14295699-14295884)
chr3 (168-352)||(14301326-14301511)
chr3 (30-170)||(54424085-54424225)
chr3 (175-357)||(17522685-17522869)
chr3 (168-350)||(6146572-6146756)
chr3 (168-356)||(16181747-16181933)
chr3 (168-356)||(14304308-14304496)
chr3 (168-329)||(17938833-17938994)
chr3 (38-170)||(8631871-8632003)
chr3 (30-170)||(17100726-17100866)
chr3 (30-170)||(17101411-17101551)
chr3 (168-356)||(54424272-54424461)
chr3 (168-350)||(6154134-6154318)
chr3 (17-170)||(14295499-14295652)
chr3 (17-170)||(14301126-14301279)
chr3 (16-170)||(50112085-50112238)
chr3 (167-356)||(13817770-13817958)
chr3 (168-343)||(17100913-17101089)
chr3 (168-343)||(17101598-17101774)
chr3 (31-170)||(19260873-19261012)
chr3 (170-356)||(16995860-16996045)
chr3 (15-170)||(35123755-35123908)
chr3 (168-356)||(317309-317496)
chr3 (168-356)||(34439140-34439329)
chr3 (168-356)||(38527988-38528175)
chr3 (16-170)||(17522923-17523076)
chr3 (217-352)||(55440659-55440796)
chr3 (168-352)||(12560037-12560223)
chr3 (168-304)||(12349388-12349526)
chr3 (170-356)||(19570490-19570674)
chr3 (30-170)||(14298494-14298634)
chr3 (30-170)||(14304121-14304261)
chr3 (185-351)||(11060809-11060977)
chr3 (168-306)||(14298681-14298821)
chr3 (219-357)||(40939437-40939578)
chr3 (30-170)||(3578161-3578302)
chr3 (175-356)||(22144071-22144252)
chr3 (30-170)||(55440882-55441023)
chr3 (186-361)||(17139785-17139963)
chr3 (34-169)||(34439378-34439513)
chr3 (45-170)||(11061039-11061165)
chr3 (15-149)||(17938633-17938766)
chr3 (30-170)||(22144306-22144446)
chr3 (229-356)||(30207539-30207668)
chr3 (230-350)||(12487580-12487701)
chr3 (30-170)||(317543-317682)
chr3 (30-170)||(16996094-16996233)
chr3 (15-168)||(53898491-53898643)
chr3 (30-170)||(19570723-19570862)
chr3 (16-155)||(11329010-11329148)
chr3 (30-170)||(6146780-6146920)
chr3 (30-170)||(6154365-6154505)
chr3 (30-170)||(13817585-13817724)
chr3 (30-165)||(16880196-16880331)
chr3 (16-167)||(17139568-17139718)
chr3 (16-167)||(12488763-12488913)
chr3 (31-166)||(12560274-12560409)
chr3 (30-170)||(16181980-16182119)
chr3 (30-156)||(39656599-39656725)
chr3 (186-351)||(48421855-48422022)
chr3 (229-361)||(16880446-16880579)
chr3 (229-351)||(13839201-13839321)
chr3 (30-167)||(14059250-14059387)
chr3 (229-351)||(11882021-11882144)
chr3 (294-361)||(14080881-14080948)
chr3 (60-170)||(11196353-11196456)
chr3 (30-100)||(12349834-12349904)
chr3 (186-301)||(14059067-14059183)
chr3 (16-97)||(14528118-14528199)
chr3 (31-91)||(3992624-3992684)
chr3 (168-353)||(11328765-11328953)
chr3 (31-91)||(38167988-38168048)
chr3 (186-351)||(39656803-39656970)
chr3 (31-91)||(2844265-2844325)
chr3 (44-167)||(3576475-3576598)
chr3 (31-91)||(16261527-16261587)
chr3 (31-91)||(30153016-30153076)
chr3 (69-170)||(38527841-38527941)
chr3 (31-91)||(53771115-53771175)
chr3 (31-91)||(54685422-54685482)
chr3 (274-356)||(13835989-13836070)
chr3 (30-167)||(30207289-30207426)
chr3 (229-349)||(38810818-38810940)
chr3 (229-342)||(28558495-28558610)
chr3 (229-349)||(38168238-38168362)
chr3 (31-91)||(33341955-33342015)
chr3 (229-349)||(33342205-33342323)
chr3 (229-349)||(2050116-2050239)
chr3 (245-349)||(12029980-12030088)
chr3 (44-156)||(17191628-17191740)
chr3 (229-266)||(17960200-17960237)
chr3 (94-167)||(47784803-47784876)
chr3 (31-91)||(7854056-7854116)
chr3 (229-261)||(14080832-14080864)
chr3 (31-87)||(17956109-17956165)
chr3 (31-91)||(23492447-23492507)
chr3 (35-91)||(45581709-45581765)
chr3 (229-261)||(47784654-47784686)
chr3 (229-260)||(13301364-13301395)
chr3 (229-260)||(13312020-13312051)
chr3 (225-260)||(15550918-15550953)
chr3 (319-349)||(2844607-2844637)
chr3 (319-349)||(7854398-7854428)
chr3 (215-261)||(9590647-9590693)
chr3 (319-349)||(15857072-15857102)
chr3 (229-349)||(17912306-17912429)
chr3 (229-349)||(19260657-19260780)
chr3 (215-264)||(51961027-51961076)
chr3 (35-91)||(54038245-54038301)
[»] chr5 (57 HSPs)
chr5 (168-357)||(19405798-19405990)
chr5 (168-350)||(24182936-24183119)
chr5 (168-350)||(11336989-11337173)
chr5 (168-356)||(20712335-20712526)
chr5 (168-352)||(23466696-23466881)
chr5 (168-356)||(1168004-1168191)
chr5 (16-170)||(1168238-1168391)
chr5 (16-170)||(11337220-11337373)
chr5 (168-349)||(4865522-4865702)
chr5 (15-170)||(24183166-24183320)
chr5 (168-354)||(28261776-28261960)
chr5 (16-170)||(20712136-20712289)
chr5 (30-170)||(19405610-19405751)
chr5 (168-356)||(21397352-21397540)
chr5 (168-356)||(21906959-21907147)
chr5 (175-358)||(21646538-21646720)
chr5 (30-170)||(21397165-21397305)
chr5 (229-357)||(22662477-22662608)
chr5 (30-170)||(4865336-4865475)
chr5 (31-170)||(11584125-11584267)
chr5 (16-156)||(3673922-3674061)
chr5 (229-350)||(23494241-23494366)
chr5 (215-351)||(432770-432907)
chr5 (30-170)||(28261594-28261729)
chr5 (168-260)||(11584314-11584405)
chr5 (30-170)||(24475653-24475790)
chr5 (229-351)||(7728743-7728866)
chr5 (16-156)||(7728480-7728619)
chr5 (30-170)||(21646774-21646913)
chr5 (168-347)||(3674122-3674303)
chr5 (32-167)||(5450880-5451015)
chr5 (44-167)||(19862296-19862419)
chr5 (16-167)||(23493979-23494129)
chr5 (186-350)||(16595784-16595951)
chr5 (31-91)||(21650769-21650829)
chr5 (17-168)||(21906778-21906910)
chr5 (168-328)||(23981336-23981503)
chr5 (30-167)||(16595581-16595717)
chr5 (229-351)||(5450643-5450767)
chr5 (30-156)||(28902264-28902390)
chr5 (30-156)||(28938659-28938785)
chr5 (16-156)||(432523-432662)
chr5 (31-91)||(2031884-2031944)
chr5 (31-91)||(11342759-11342819)
chr5 (31-91)||(21205000-21205060)
chr5 (229-349)||(21651019-21651137)
chr5 (229-331)||(27182399-27182502)
chr5 (229-361)||(32965941-32966073)
chr5 (16-156)||(21222656-21222795)
chr5 (229-266)||(28902514-28902551)
chr5 (229-266)||(28938909-28938946)
chr5 (231-266)||(21297063-21297098)
chr5 (319-349)||(11584466-11584496)
chr5 (16-58)||(23466517-23466558)
chr5 (16-156)||(21617076-21617215)
chr5 (186-260)||(21617294-21617370)
chr5 (229-261)||(21310602-21310634)
[»] chr6 (47 HSPs)
chr6 (15-170)||(31628327-31628481)
chr6 (168-356)||(32899050-32899240)
chr6 (186-353)||(18777407-18777576)
chr6 (168-356)||(13014507-13014697)
chr6 (31-170)||(18777220-18777359)
chr6 (168-350)||(18570539-18570721)
chr6 (168-356)||(16086277-16086466)
chr6 (168-356)||(16106776-16106965)
chr6 (30-170)||(32898863-32899003)
chr6 (15-170)||(16106575-16106729)
chr6 (31-170)||(18570353-18570492)
chr6 (168-356)||(22441194-22441380)
chr6 (30-170)||(18432716-18432856)
chr6 (15-170)||(16086076-16086230)
chr6 (229-351)||(15079513-15079636)
chr6 (229-361)||(35135804-35135937)
chr6 (175-352)||(18432910-18433086)
chr6 (186-356)||(18399215-18399387)
chr6 (229-361)||(33325015-33325148)
chr6 (30-170)||(22441007-22441147)
chr6 (30-170)||(13014744-13014883)
chr6 (16-167)||(18398998-18399148)
chr6 (229-363)||(16887581-16887716)
chr6 (225-356)||(25640359-25640491)
chr6 (229-349)||(25919936-25920057)
chr6 (16-167)||(18381720-18381870)
chr6 (186-349)||(21410854-21411020)
chr6 (274-356)||(31628558-31628638)
chr6 (16-156)||(25367285-25367424)
chr6 (30-170)||(28195127-28195268)
chr6 (62-167)||(21411087-21411191)
chr6 (15-91)||(18583376-18583451)
chr6 (44-167)||(21623255-21623378)
chr6 (31-91)||(26089809-26089869)
chr6 (31-91)||(15742341-15742401)
chr6 (31-91)||(23994997-23995057)
chr6 (31-91)||(35015278-35015338)
chr6 (229-331)||(23148304-23148407)
chr6 (229-331)||(23153755-23153858)
chr6 (16-156)||(22361813-22361952)
chr6 (16-156)||(25651297-25651436)
chr6 (31-91)||(18002617-18002677)
chr6 (186-266)||(25367124-25367206)
chr6 (32-86)||(25744331-25744385)
chr6 (229-331)||(27751743-27751846)
chr6 (319-349)||(19983101-19983131)
chr6 (315-351)||(25367038-25367074)
[»] chr8 (57 HSPs)
chr8 (168-350)||(20561435-20561618)
chr8 (168-356)||(20529650-20529840)
chr8 (168-356)||(20572991-20573179)
chr8 (30-170)||(20561665-20561805)
chr8 (15-170)||(20573226-20573380)
chr8 (30-165)||(20653944-20654079)
chr8 (168-357)||(21681263-21681456)
chr8 (168-353)||(37611928-37612114)
chr8 (225-352)||(21259298-21259426)
chr8 (16-170)||(20481665-20481818)
chr8 (168-356)||(19992857-19993042)
chr8 (30-151)||(20647882-20648003)
chr8 (170-356)||(41246919-41247105)
chr8 (229-361)||(39446558-39446691)
chr8 (168-356)||(22234604-22234791)
chr8 (168-356)||(25122702-25122888)
chr8 (168-350)||(22981531-22981713)
chr8 (30-161)||(21681075-21681207)
chr8 (30-170)||(37611741-37611881)
chr8 (16-170)||(41246718-41246870)
chr8 (185-356)||(20481881-20482051)
chr8 (16-166)||(39446804-39446953)
chr8 (242-350)||(20653837-20653946)
chr8 (35-167)||(22981351-22981483)
chr8 (16-167)||(38533709-38533859)
chr8 (30-170)||(22234838-22234977)
chr8 (30-170)||(19993089-19993228)
chr8 (224-351)||(38533967-38534095)
chr8 (16-167)||(23837258-23837408)
chr8 (168-300)||(7000479-7000611)
chr8 (16-167)||(21198189-21198339)
chr8 (229-349)||(31194127-31194248)
chr8 (16-156)||(26011554-26011693)
chr8 (31-91)||(274517-274577)
chr8 (31-91)||(641272-641332)
chr8 (31-91)||(827078-827138)
chr8 (31-91)||(16039002-16039062)
chr8 (31-91)||(41506930-41506990)
chr8 (186-261)||(15970098-15970174)
chr8 (31-91)||(39115349-39115409)
chr8 (16-156)||(5854674-5854813)
chr8 (94-167)||(17285341-17285414)
chr8 (229-301)||(22735699-22735772)
chr8 (31-91)||(24716983-24717043)
chr8 (319-349)||(274859-274889)
chr8 (319-349)||(640960-640990)
chr8 (319-349)||(826766-826796)
chr8 (185-260)||(23225973-23226050)
chr8 (319-349)||(24716671-24716701)
chr8 (319-349)||(29760367-29760397)
chr8 (16-156)||(15933358-15933497)
chr8 (229-349)||(24385560-24385683)
chr8 (229-349)||(24928624-24928747)
chr8 (133-170)||(25122618-25122655)
chr8 (16-156)||(29306477-29306616)
chr8 (315-351)||(21191408-21191444)
chr8 (315-351)||(21197954-21197990)
[»] scaffold0044 (2 HSPs)
scaffold0044 (168-356)||(38558-38748)
scaffold0044 (30-168)||(38371-38509)
[»] chr4 (61 HSPs)
chr4 (30-170)||(16732242-16732382)
chr4 (168-349)||(23269738-23269921)
chr4 (31-170)||(12837234-12837373)
chr4 (168-356)||(819729-819918)
chr4 (168-356)||(20813345-20813534)
chr4 (168-356)||(44056174-44056364)
chr4 (168-350)||(52265311-52265495)
chr4 (168-356)||(12837000-12837187)
chr4 (168-356)||(34395517-34395706)
chr4 (168-353)||(45458656-45458842)
chr4 (168-356)||(8872272-8872459)
chr4 (168-356)||(30458163-30458352)
chr4 (15-170)||(45458889-45459043)
chr4 (178-356)||(21959262-21959441)
chr4 (168-356)||(44347086-44347272)
chr4 (168-361)||(13809303-13809497)
chr4 (30-170)||(30457976-30458116)
chr4 (168-350)||(16732429-16732612)
chr4 (168-361)||(18494119-18494315)
chr4 (16-170)||(21959498-21959650)
chr4 (168-350)||(30232299-30232484)
chr4 (168-356)||(53704533-53704721)
chr4 (16-170)||(34395317-34395470)
chr4 (30-170)||(44055988-44056127)
chr4 (168-350)||(27961231-27961415)
chr4 (30-170)||(53704768-53704907)
chr4 (16-170)||(23269968-23270121)
chr4 (30-170)||(8872506-8872645)
chr4 (229-352)||(15045150-15045274)
chr4 (229-352)||(15109150-15109274)
chr4 (30-170)||(55376632-55376771)
chr4 (185-356)||(53907508-53907678)
chr4 (32-170)||(44346902-44347039)
chr4 (16-167)||(27961031-27961181)
chr4 (229-361)||(40885356-40885490)
chr4 (16-167)||(13809547-13809697)
chr4 (30-170)||(53907734-53907873)
chr4 (168-331)||(55376423-55376585)
chr4 (16-167)||(15044888-15045038)
chr4 (16-167)||(52265545-52265695)
chr4 (30-105)||(820015-820090)
chr4 (31-168)||(30232533-30232669)
chr4 (229-349)||(19821580-19821701)
chr4 (93-170)||(20813581-20813658)
chr4 (16-167)||(15109386-15109536)
chr4 (16-167)||(41165983-41166133)
chr4 (186-351)||(34177450-34177617)
chr4 (30-156)||(47535113-47535239)
chr4 (30-170)||(18494362-18494502)
chr4 (31-91)||(14951836-14951896)
chr4 (229-331)||(13246738-13246841)
chr4 (35-91)||(5682648-5682704)
chr4 (31-91)||(15272433-15272493)
chr4 (186-266)||(14901508-14901590)
chr4 (229-266)||(37956912-37956949)
chr4 (31-91)||(25119328-25119388)
chr4 (139-170)||(819965-819996)
chr4 (319-349)||(5682337-5682367)
chr4 (15-89)||(10104380-10104453)
chr4 (215-260)||(7185739-7185784)
chr4 (16-156)||(18276494-18276633)
[»] scaffold0075 (1 HSPs)
scaffold0075 (16-170)||(5001-5154)
[»] scaffold0031 (5 HSPs)
scaffold0031 (178-356)||(70883-71063)
scaffold0031 (175-357)||(31310-31497)
scaffold0031 (30-170)||(70686-70826)
scaffold0031 (30-170)||(31117-31256)
scaffold0031 (30-156)||(97246-97372)
[»] chr7 (64 HSPs)
chr7 (16-170)||(11287477-11287630)
chr7 (168-356)||(45451966-45452155)
chr7 (168-350)||(11287677-11287859)
chr7 (168-356)||(12759247-12759436)
chr7 (168-356)||(3895285-3895472)
chr7 (16-170)||(26070298-26070451)
chr7 (16-170)||(26094085-26094238)
chr7 (168-356)||(143899-144087)
chr7 (15-166)||(7284098-7284248)
chr7 (15-170)||(15822465-15822619)
chr7 (185-357)||(12247915-12248091)
chr7 (31-170)||(3895099-3895238)
chr7 (168-356)||(15822231-15822419)
chr7 (168-356)||(44865491-44865677)
chr7 (16-170)||(12369874-12370027)
chr7 (168-356)||(12369637-12369827)
chr7 (185-352)||(16569807-16569976)
chr7 (185-352)||(16595686-16595855)
chr7 (16-170)||(16570039-16570193)
chr7 (16-170)||(16595469-16595623)
chr7 (168-356)||(35095075-35095262)
chr7 (31-170)||(12248154-12248294)
chr7 (168-361)||(49047467-49047661)
chr7 (168-356)||(39046427-39046615)
chr7 (168-353)||(47290041-47290229)
chr7 (30-170)||(12759060-12759200)
chr7 (168-356)||(13862731-13862916)
chr7 (30-170)||(13862963-13863104)
chr7 (30-170)||(45452202-45452340)
chr7 (168-352)||(13275037-13275222)
chr7 (30-168)||(47289854-47289992)
chr7 (168-358)||(26070061-26070251)
chr7 (168-358)||(26093848-26094038)
chr7 (30-170)||(143712-143852)
chr7 (30-170)||(44865303-44865444)
chr7 (16-167)||(49047711-49047861)
chr7 (237-358)||(26069403-26069525)
chr7 (31-170)||(35094890-35095028)
chr7 (168-260)||(7283956-7284047)
chr7 (16-167)||(13377589-13377739)
chr7 (30-170)||(39046662-39046797)
chr7 (31-91)||(3049657-3049717)
chr7 (16-165)||(17223977-17224125)
chr7 (16-154)||(13274847-13274974)
chr7 (31-91)||(111390-111450)
chr7 (31-91)||(126489-126549)
chr7 (31-91)||(2028995-2029055)
chr7 (31-91)||(2190307-2190367)
chr7 (229-351)||(13377852-13377976)
chr7 (31-91)||(42056410-42056470)
chr7 (229-331)||(11580589-11580692)
chr7 (229-331)||(13036866-13036969)
chr7 (16-156)||(9838939-9839078)
chr7 (44-128)||(16919646-16919730)
chr7 (35-91)||(32494167-32494223)
chr7 (229-349)||(16212072-16212195)
chr7 (16-156)||(48356704-48356843)
chr7 (319-349)||(111078-111108)
chr7 (319-349)||(126831-126861)
chr7 (319-349)||(3060364-3060394)
chr7 (319-349)||(7283865-7283895)
chr7 (229-346)||(36052972-36053092)
chr7 (215-264)||(25124437-25124486)
chr7 (303-351)||(17223737-17223785)
[»] scaffold0396 (2 HSPs)
scaffold0396 (168-349)||(11512-11695)
scaffold0396 (16-170)||(11742-11895)
[»] chr2 (55 HSPs)
chr2 (168-352)||(28974309-28974494)
chr2 (168-346)||(25602284-25602466)
chr2 (168-349)||(27262063-27262247)
chr2 (15-170)||(271229-271383)
chr2 (168-356)||(4447932-4448120)
chr2 (30-170)||(36890719-36890859)
chr2 (16-170)||(25602084-25602237)
chr2 (170-356)||(271432-271617)
chr2 (16-170)||(28974109-28974262)
chr2 (15-170)||(4448167-4448321)
chr2 (168-346)||(36890493-36890672)
chr2 (168-356)||(25875721-25875907)
chr2 (168-346)||(22579671-22579849)
chr2 (168-361)||(24571084-24571279)
chr2 (68-170)||(27261915-27262016)
chr2 (16-170)||(32465918-32466070)
chr2 (225-361)||(7321837-7321974)
chr2 (168-356)||(23836507-23836692)
chr2 (229-351)||(19668911-19669034)
chr2 (210-356)||(17367119-17367268)
chr2 (30-170)||(23836739-23836879)
chr2 (32-170)||(25875954-25876091)
chr2 (16-167)||(68052-68202)
chr2 (16-167)||(24571329-24571479)
chr2 (30-170)||(22579896-22580033)
chr2 (229-350)||(68315-68436)
chr2 (229-349)||(3050-3171)
chr2 (30-167)||(31146218-31146354)
chr2 (186-261)||(722668-722743)
chr2 (16-167)||(43645953-43646103)
chr2 (30-97)||(6879510-6879577)
chr2 (186-260)||(19666805-19666880)
chr2 (31-91)||(22274796-22274856)
chr2 (31-91)||(22284029-22284089)
chr2 (229-349)||(24294326-24294447)
chr2 (168-331)||(32466117-32466278)
chr2 (229-350)||(31145982-31146104)
chr2 (229-349)||(9652709-9652827)
chr2 (214-256)||(17366958-17367000)
chr2 (229-331)||(22863236-22863339)
chr2 (206-301)||(23821492-23821589)
chr2 (206-301)||(23830571-23830668)
chr2 (31-87)||(21274174-21274230)
chr2 (229-300)||(463044-463116)
chr2 (319-349)||(19794538-19794568)
chr2 (30-167)||(22775242-22775379)
chr2 (30-167)||(22780620-22780757)
chr2 (229-331)||(36982292-36982395)
chr2 (229-266)||(22775102-22775139)
chr2 (229-266)||(22780480-22780517)
chr2 (31-87)||(9653021-9653077)
chr2 (16-84)||(19433452-19433519)
chr2 (311-351)||(24087256-24087296)
chr2 (30-128)||(25305518-25305617)
chr2 (303-351)||(25305830-25305878)
[»] scaffold0035 (4 HSPs)
scaffold0035 (16-170)||(117997-118150)
scaffold0035 (16-170)||(109496-109649)
scaffold0035 (168-356)||(109260-109449)
scaffold0035 (168-356)||(117761-117950)
[»] scaffold0014 (4 HSPs)
scaffold0014 (168-349)||(159560-159742)
scaffold0014 (16-170)||(85392-85545)
scaffold0014 (168-357)||(85592-85782)
scaffold0014 (16-170)||(159359-159513)
[»] scaffold0012 (3 HSPs)
scaffold0012 (30-170)||(253023-253163)
scaffold0012 (168-242)||(252902-252976)
scaffold0012 (229-331)||(247293-247397)
[»] scaffold0554 (2 HSPs)
scaffold0554 (169-348)||(2177-2357)
scaffold0554 (16-170)||(1976-2129)
[»] scaffold0338 (2 HSPs)
scaffold0338 (16-170)||(9047-9200)
scaffold0338 (170-349)||(9249-9430)
[»] scaffold0037 (3 HSPs)
scaffold0037 (168-358)||(24523-24715)
scaffold0037 (31-170)||(24762-24901)
scaffold0037 (31-91)||(95049-95109)
[»] scaffold0240 (2 HSPs)
scaffold0240 (168-356)||(7830-8019)
scaffold0240 (16-170)||(7629-7782)
[»] scaffold0008 (2 HSPs)
scaffold0008 (168-356)||(22951-23140)
scaffold0008 (16-170)||(22751-22904)
[»] scaffold0310 (4 HSPs)
scaffold0310 (15-170)||(148-302)
scaffold0310 (30-170)||(6442-6582)
scaffold0310 (175-260)||(10-94)
scaffold0310 (175-260)||(6304-6388)
[»] scaffold0190 (2 HSPs)
scaffold0190 (15-170)||(9996-10150)
scaffold0190 (168-350)||(10197-10378)
[»] scaffold0022 (6 HSPs)
scaffold0022 (168-349)||(112351-112532)
scaffold0022 (16-170)||(112579-112732)
scaffold0022 (16-167)||(109650-109800)
scaffold0022 (30-167)||(102959-103096)
scaffold0022 (229-300)||(109905-109977)
scaffold0022 (168-350)||(102727-102909)
[»] scaffold0034 (6 HSPs)
scaffold0034 (168-356)||(40919-41108)
scaffold0034 (168-356)||(46426-46615)
scaffold0034 (31-170)||(46239-46379)
scaffold0034 (31-170)||(40732-40872)
scaffold0034 (35-91)||(79942-79998)
scaffold0034 (319-349)||(80280-80310)
[»] scaffold1867 (2 HSPs)
scaffold1867 (168-356)||(404-591)
scaffold1867 (15-170)||(203-357)
[»] scaffold0103 (2 HSPs)
scaffold0103 (168-350)||(33922-34106)
scaffold0103 (16-170)||(33722-33875)
[»] scaffold0740 (2 HSPs)
scaffold0740 (168-356)||(4544-4730)
scaffold0740 (30-170)||(4358-4497)
[»] scaffold0480 (4 HSPs)
scaffold0480 (168-356)||(5048-5234)
scaffold0480 (16-170)||(8916-9069)
scaffold0480 (168-352)||(8683-8869)
scaffold0480 (16-170)||(5281-5433)
[»] scaffold0021 (10 HSPs)
scaffold0021 (168-356)||(88535-88725)
scaffold0021 (170-352)||(16162-16347)
scaffold0021 (170-352)||(25693-25878)
scaffold0021 (168-352)||(11948-12135)
scaffold0021 (16-170)||(132284-132437)
scaffold0021 (31-170)||(88349-88488)
scaffold0021 (168-356)||(132047-132237)
scaffold0021 (16-170)||(11747-11901)
scaffold0021 (80-170)||(16022-16112)
scaffold0021 (80-170)||(25553-25643)
[»] scaffold0610 (2 HSPs)
scaffold0610 (168-357)||(371-563)
scaffold0610 (16-170)||(610-763)
[»] scaffold0359 (4 HSPs)
scaffold0359 (15-170)||(1376-1530)
scaffold0359 (168-356)||(11453-11640)
scaffold0359 (168-356)||(1577-1764)
scaffold0359 (30-170)||(11687-11828)
[»] scaffold0117 (2 HSPs)
scaffold0117 (15-170)||(11602-11756)
scaffold0117 (168-356)||(11368-11555)
[»] scaffold0120 (5 HSPs)
scaffold0120 (168-357)||(31470-31661)
scaffold0120 (168-357)||(47345-47536)
scaffold0120 (35-170)||(21590-21724)
scaffold0120 (30-170)||(31284-31423)
scaffold0120 (168-357)||(21771-21962)
[»] scaffold0092 (2 HSPs)
scaffold0092 (168-361)||(3579-3774)
scaffold0092 (30-167)||(3392-3529)
[»] scaffold0589 (2 HSPs)
scaffold0589 (168-361)||(8065-8260)
scaffold0589 (78-167)||(7927-8015)
[»] scaffold0160 (2 HSPs)
scaffold0160 (16-170)||(81-234)
scaffold0160 (168-300)||(278-411)
[»] scaffold0001 (7 HSPs)
scaffold0001 (168-356)||(79687-79877)
scaffold0001 (15-170)||(60865-61019)
scaffold0001 (168-356)||(61066-61256)
scaffold0001 (33-170)||(70655-70793)
scaffold0001 (168-356)||(70422-70608)
scaffold0001 (229-349)||(172211-172334)
scaffold0001 (229-349)||(177914-178037)
[»] scaffold0816 (1 HSPs)
scaffold0816 (168-356)||(2865-3052)
[»] scaffold0025 (4 HSPs)
scaffold0025 (31-170)||(146675-146814)
scaffold0025 (229-349)||(146907-147030)
scaffold0025 (31-156)||(53420-53545)
scaffold0025 (186-260)||(53623-53699)
[»] scaffold0673 (4 HSPs)
scaffold0673 (168-356)||(6646-6832)
scaffold0673 (175-343)||(633-802)
scaffold0673 (30-170)||(856-996)
scaffold0673 (30-170)||(6879-7019)
[»] scaffold0026 (1 HSPs)
scaffold0026 (168-352)||(89666-89852)
[»] scaffold1164 (3 HSPs)
scaffold1164 (31-170)||(1455-1594)
scaffold1164 (168-260)||(1641-1732)
scaffold1164 (319-349)||(1793-1823)
[»] scaffold0083 (2 HSPs)
scaffold0083 (168-355)||(15133-15319)
scaffold0083 (30-170)||(14947-15086)
[»] scaffold0058 (1 HSPs)
scaffold0058 (206-352)||(70107-70256)
[»] scaffold0447 (4 HSPs)
scaffold0447 (168-356)||(4824-5009)
scaffold0447 (168-356)||(9438-9623)
scaffold0447 (16-170)||(4623-4777)
scaffold0447 (16-170)||(9237-9391)
[»] scaffold0383 (2 HSPs)
scaffold0383 (168-356)||(7433-7618)
scaffold0383 (45-170)||(7260-7386)
[»] scaffold0011 (5 HSPs)
scaffold0011 (15-170)||(254848-255002)
scaffold0011 (15-170)||(261454-261608)
scaffold0011 (168-356)||(254614-254801)
scaffold0011 (168-356)||(261220-261407)
scaffold0011 (229-339)||(123007-123118)
[»] scaffold0342 (4 HSPs)
scaffold0342 (229-351)||(12590-12714)
scaffold0342 (16-170)||(6000-6155)
scaffold0342 (31-91)||(572-632)
scaffold0342 (168-227)||(6202-6261)
[»] scaffold0095 (2 HSPs)
scaffold0095 (229-361)||(33520-33653)
scaffold0095 (16-166)||(33766-33915)
[»] scaffold0016 (5 HSPs)
scaffold0016 (170-356)||(164476-164661)
scaffold0016 (32-170)||(164290-164427)
scaffold0016 (31-91)||(162299-162359)
scaffold0016 (31-91)||(166385-166445)
scaffold0016 (319-349)||(166073-166103)
[»] scaffold0389 (1 HSPs)
scaffold0389 (185-361)||(10938-11116)
[»] scaffold0158 (3 HSPs)
scaffold0158 (168-331)||(25471-25634)
scaffold0158 (30-170)||(25031-25171)
scaffold0158 (30-170)||(25284-25424)
[»] scaffold0068 (4 HSPs)
scaffold0068 (30-170)||(48220-48359)
scaffold0068 (30-170)||(61668-61807)
scaffold0068 (168-356)||(48406-48592)
scaffold0068 (168-356)||(61854-62040)
[»] scaffold0409 (2 HSPs)
scaffold0409 (185-351)||(1150-1319)
scaffold0409 (185-351)||(9405-9574)
[»] scaffold0456 (2 HSPs)
scaffold0456 (185-351)||(1348-1517)
scaffold0456 (185-351)||(8493-8662)
[»] scaffold0077 (3 HSPs)
scaffold0077 (30-170)||(15505-15645)
scaffold0077 (168-260)||(15367-15458)
scaffold0077 (319-349)||(15276-15306)
[»] scaffold0521 (1 HSPs)
scaffold0521 (186-361)||(11372-11548)
[»] scaffold0138 (1 HSPs)
scaffold0138 (229-349)||(22233-22354)
[»] scaffold0260 (1 HSPs)
scaffold0260 (226-356)||(8665-8795)
[»] scaffold0032 (5 HSPs)
scaffold0032 (283-361)||(93643-93721)
scaffold0032 (31-91)||(55655-55715)
scaffold0032 (229-330)||(55905-56007)
scaffold0032 (83-167)||(93810-93893)
scaffold0032 (215-260)||(104518-104563)
[»] scaffold0243 (2 HSPs)
scaffold0243 (186-336)||(2134-2286)
scaffold0243 (17-167)||(2353-2502)
[»] scaffold0049 (2 HSPs)
scaffold0049 (60-170)||(20275-20386)
scaffold0049 (168-260)||(20433-20524)
[»] scaffold0195 (1 HSPs)
scaffold0195 (17-104)||(618-704)
[»] scaffold0123 (2 HSPs)
scaffold0123 (229-361)||(8332-8465)
scaffold0123 (229-352)||(11198-11322)
[»] scaffold0876 (2 HSPs)
scaffold0876 (168-260)||(34-125)
scaffold0876 (319-349)||(186-216)
[»] scaffold0122 (4 HSPs)
scaffold0122 (168-260)||(19850-19941)
scaffold0122 (168-260)||(24154-24245)
scaffold0122 (117-170)||(19988-20041)
scaffold0122 (117-170)||(24292-24345)
[»] scaffold1295 (1 HSPs)
scaffold1295 (186-349)||(384-548)
[»] scaffold0091 (2 HSPs)
scaffold0091 (30-98)||(32276-32344)
scaffold0091 (30-98)||(41959-42027)
[»] scaffold0028 (3 HSPs)
scaffold0028 (17-89)||(89584-89655)
scaffold0028 (229-331)||(89306-89409)
scaffold0028 (229-331)||(107636-107739)
[»] scaffold0327 (1 HSPs)
scaffold0327 (271-349)||(6033-6111)
[»] scaffold0162 (2 HSPs)
scaffold0162 (30-167)||(7062-7199)
scaffold0162 (229-351)||(26251-26371)
[»] scaffold0013 (2 HSPs)
scaffold0013 (30-167)||(35551-35688)
scaffold0013 (229-351)||(35800-35925)
[»] scaffold0053 (1 HSPs)
scaffold0053 (16-156)||(76895-77034)
[»] scaffold0234 (2 HSPs)
scaffold0234 (31-91)||(17525-17585)
scaffold0234 (229-349)||(17217-17335)
[»] scaffold0183 (1 HSPs)
scaffold0183 (229-331)||(5498-5603)
[»] scaffold0706 (2 HSPs)
scaffold0706 (31-91)||(6664-6724)
scaffold0706 (229-345)||(6355-6474)
[»] scaffold0686 (2 HSPs)
scaffold0686 (31-91)||(6204-6264)
scaffold0686 (319-349)||(5686-5716)
[»] scaffold0597 (2 HSPs)
scaffold0597 (31-91)||(1099-1159)
scaffold0597 (229-349)||(791-909)
[»] scaffold0251 (2 HSPs)
scaffold0251 (31-91)||(13507-13567)
scaffold0251 (31-91)||(21481-21541)
[»] scaffold0184 (1 HSPs)
scaffold0184 (31-91)||(31401-31461)
[»] scaffold0175 (1 HSPs)
scaffold0175 (31-91)||(15023-15083)
[»] scaffold0078 (1 HSPs)
scaffold0078 (31-91)||(41383-41443)
[»] scaffold0483 (1 HSPs)
scaffold0483 (30-167)||(6734-6871)
[»] scaffold0465 (2 HSPs)
scaffold0465 (229-349)||(9795-9913)
scaffold0465 (31-84)||(10094-10147)
[»] scaffold0150 (2 HSPs)
scaffold0150 (229-349)||(28859-28980)
scaffold0150 (50-156)||(28629-28735)
[»] scaffold0700 (1 HSPs)
scaffold0700 (16-156)||(2585-2724)
[»] scaffold0302 (1 HSPs)
scaffold0302 (229-349)||(12419-12543)
[»] scaffold0808 (1 HSPs)
scaffold0808 (271-327)||(1948-2004)
[»] scaffold0574 (1 HSPs)
scaffold0574 (31-91)||(9628-9688)
[»] scaffold0507 (1 HSPs)
scaffold0507 (186-258)||(1406-1478)
[»] scaffold0039 (2 HSPs)
scaffold0039 (35-91)||(12641-12697)
scaffold0039 (229-349)||(12326-12449)
[»] scaffold0018 (1 HSPs)
scaffold0018 (278-349)||(51018-51089)
[»] scaffold0009 (2 HSPs)
scaffold0009 (16-155)||(69517-69655)
scaffold0009 (229-349)||(272331-272454)
[»] scaffold0006 (1 HSPs)
scaffold0006 (16-170)||(197287-197440)
[»] scaffold0833 (1 HSPs)
scaffold0833 (15-57)||(3358-3399)
[»] scaffold0266 (2 HSPs)
scaffold0266 (244-349)||(3416-3524)
scaffold0266 (229-349)||(1431-1554)
[»] scaffold0132 (1 HSPs)
scaffold0132 (319-349)||(42767-42797)
[»] scaffold0116 (1 HSPs)
scaffold0116 (319-349)||(30510-30540)
[»] scaffold0004 (2 HSPs)
scaffold0004 (31-91)||(186647-186706)
scaffold0004 (31-91)||(193609-193668)
[»] scaffold0498 (1 HSPs)
scaffold0498 (229-349)||(9184-9307)
[»] scaffold0010 (1 HSPs)
scaffold0010 (186-260)||(31297-31373)


Alignment Details
Target: chr1 (Bit Score: 186; Significance: 1e-100; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 168 - 361
Target Start/End: Complemental strand, 9784051 - 9783858
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagatagag 267  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  9784051 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaattgcagtaagtgattatgatgaattctaacccccttaccttagatagag 9783952  T
Q  268 taatccctagcttaggcttcaattttgctcctagctctcatccaatccttgattcttcaagttcctcttctctctaacccttttctcctttgct 361  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9783951 taatccctagcttaggcttcaattttgctcctagctctcacccaatccttgattcttcaagttcctcttctctctaacccttttctcctttgct 9783858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 15 - 170
Target Start/End: Complemental strand, 9784249 - 9784098
Alignment:
Q  15 tcaacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctc 114  Q
    ||||||||||| || |||||||||||||||||||||||||||||   ||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  9784249 tcaacaacaac-atcaattgatcatgaaacttatcacaattcaa---caacaaagcataattcaccaattaagcatattttcaacatataccaacttctc 9784154  T
Q  115 atactttgaacatgtgattcaactaacaacaattcaattatccataacttcataca 170  Q
    ||||||||||||||| ||||||  ||||||||||||||||||||||||||||||||    
T  9784153 atactttgaacatgtaattcaatcaacaacaattcaattatccataacttcataca 9784098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 15 - 170
Target Start/End: Original strand, 21718287 - 21718441
Alignment:
Q  15 tcaacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctc 114  Q
    ||||||||||| || |||||||||||||||||||||||| |||  ||||||| |||||||||||||||||||||||||||| |||| ||||||| |||||    
T  21718287 tcaacaacaac-atcaattgatcatgaaacttatcacaaatcatcaacaacatagcataattcaccaattgagcatattttgaacacataccaatttctc 21718385  T
Q  115 atactttgaacatgtgattcaactaacaacaattcaattatccataacttcataca 170  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  21718386 atactttgaacatgtaattcaactaacaacaattcaattatccataacttcataca 21718441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 168 - 350
Target Start/End: Complemental strand, 35522339 - 35522156
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattg-aaaattgcaataagtgattatgatgaattctaacccccttaccttagataga 266  Q
    |||||| |||||||||||||||||||| |||||||||| |||||||| ||||||||||||| |||||||||||||||||||| |||||||||||| ||||    
T  35522339 acaattaatcaattcacccaattaagcccttttcatacaaataattgaaaaattgcaataa-tgattatgatgaattctaactcccttaccttagttaga 35522241  T
Q  267 gtaa--tccctagcttaggcttcaattttgctcctagctctcatccaatccttgattcttcaagttcctcttctctctaacccttt 350  Q
     |||  ||| |||||||||||||||||||||||||||||||| | ||  |||||||||||||||||||||||||||||||||||||    
T  35522240 ttaatctccttagcttaggcttcaattttgctcctagctctc-ttcaccccttgattcttcaagttcctcttctctctaacccttt 35522156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 168 - 356
Target Start/End: Complemental strand, 22403097 - 22402908
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagatagag 267  Q
    |||||| ||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||      
T  22403097 acaattaatcaattcacccaattaagcacttttcatacaaataattgaaaattacaataagtgattatgatgaattctaacccccttaccttagttaggt 22402998  T
Q  268 taa--tccctagcttaggcttcaattttgctcctagctc-tcatccaatccttgattcttcaagttcctcttctctctaacccttttctcct 356  Q
    |||  || ||| ||||||||| ||||||||||||| ||| || ||||| ||||||||||||||| ||||||||||||| |||||||| ||||    
T  22402997 taatctctctaccttaggctttaattttgctcctaactcttcttccaacccttgattcttcaag-tcctcttctctct-acccttttatcct 22402908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 31 - 170
Target Start/End: Original strand, 35054830 - 35054969
Alignment:
Q  31 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatgtg 130  Q
    |||||||||||||||||||||| ||||  ||| ||| ||||||||||||||||||||||||||||||||| ||||| | || |||||||||||||||||     
T  35054830 attgatcatgaaacttatcacagttcatcaactacatagcataattcaccaattgagcatattttcaacacatacccatttttcatactttgaacatgta 35054929  T
Q  131 attcaactaacaacaattcaattatccataacttcataca 170  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  35054930 attcaactaacaacaattcaattattcataacttcataca 35054969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 168 - 353
Target Start/End: Original strand, 35055016 - 35055202
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagatagag 267  Q
    |||||| | ||||||||||||||||||||||||||||| ||||||||||||| | ||||||||||||||||||||| ||||||||||||||||| |||      
T  35055016 acaattaaccaattcacccaattaagcacttttcatacaaataattgaaaatagaaataagtgattatgatgaattttaacccccttaccttagttaggt 35055115  T
Q  268 taa--tccctagcttaggcttcaattttgctcctagctc-tcatccaatccttgattcttcaagttcctcttctctctaacccttttct 353  Q
    |||  || |||||||||||||||||||||||||||| || ||  |||| ||||||||||||| | ||||||||||||| ||||||||||    
T  35055116 taatctctctagcttaggcttcaattttgctcctagatcttctcccaacccttgattcttcatg-tcctcttctctct-acccttttct 35055202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 16 - 170
Target Start/End: Original strand, 49967710 - 49967863
Alignment:
Q  16 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctca 115  Q
    |||||||||| || ||||||||||||||| ||||||||||||  |||||||| | |||||||||||||||||||||||||||||| ||||| | || | |    
T  49967710 caacaacaac-atcaattgatcatgaaacgtatcacaattcatcaacaacaatgtataattcaccaattgagcatattttcaacacatacccatttttta 49967808  T
Q  116 tactttgaacatgtgattcaactaacaacaattcaattatccataacttcataca 170  Q
    || ||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  49967809 taatttgaacatgtaattcaactaacaacaattcaattattcataacttcataca 49967863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 168 - 350
Target Start/End: Original strand, 21718488 - 21718670
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaa-ttgcaataagtgattatgatgaattctaacccccttaccttagataga 266  Q
    |||||| ||||||||||||||||||||||||||||||| |||||||||||| ||||||||| |||||||  |||||||||| ||| ||||||||| ||||    
T  21718488 acaattaatcaattcacccaattaagcacttttcatac-aataattgaaaaattgcaataa-tgattatattgaattctaatccc-ttaccttagttaga 21718584  T
Q  267 gtaatc--cctagcttaggcttcaattttgctcctagctctcatccaatccttgattcttcaagttcctcttctctctaacccttt 350  Q
     || ||  ||||||||| |||||||||| |||| ||||| ||  |||||| ||||||||||||||||||||||||| |||||||||    
T  21718585 ttagtctccctagcttatgcttcaatttagctcatagctttcccccaatcattgattcttcaagttcctcttctctttaacccttt 21718670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 168 - 349
Target Start/End: Original strand, 49967910 - 49968092
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagatagag 267  Q
    |||||| ||||||||| ||||||||||||||||||| | |||||||||||||| ||||||||||||| |||||||||||||||||||||||||| |||      
T  49967910 acaattaatcaattcatccaattaagcacttttcatgcaaataattgaaaattacaataagtgattacgatgaattctaacccccttaccttag-taggt 49968008  T
Q  268 taa--tccctagcttaggcttcaattttgctcctagctc-tcatccaatccttgattcttcaagttcctcttctctctaaccctt 349  Q
    |||  || ||| ||||| ||||||||||||| ||||||| ||  ||||  |||||||||||||| || |||||||||||||||||    
T  49968009 taatctctctaccttagacttcaattttgcttctagctcttctcccaactcttgattcttcaag-tcatcttctctctaaccctt 49968092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 229 - 361
Target Start/End: Complemental strand, 51627589 - 51627457
Alignment:
Q  229 tgattatgatgaattctaacccccttaccttagatagagtaa-tccctagcttaggcttcaattttgctcctagctctcatccaatccttgattcttcaa 327  Q
    ||||||||||||||||||||||||||||||||| |||| ||| ||||||||||| |||||||||| ||||||||||| | |||||||||||| |||||||    
T  51627589 tgattatgatgaattctaacccccttaccttagttagattaactccctagcttaagcttcaatttagctcctagctccc-tccaatccttgaatcttcaa 51627491  T
Q  328 gttcctcttctctctaacccttttctcctttgct 361  Q
    ||||| ||||||||||||| |||||  |||||||    
T  51627490 gttccccttctctctaaccattttcctctttgct 51627457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 35 - 170
Target Start/End: Complemental strand, 22403279 - 22403144
Alignment:
Q  35 atcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcat--actttgaacatgtgat 132  Q
    |||||||||||||||||||||||  |||||||| |||||||||||||||||||||||||||||||| ||||| | || ||||  ||||||||||||| ||    
T  22403279 atcatgaaacttatcacaattcatcaacaacaatgcataattcaccaattgagcatattttcaacacataccca-ttttcatacactttgaacatgtaat 22403181  T
Q  133 tcaactaacaacaattcaattatccataacttcataca 170  Q
    ||||||||| |||||| |||||| ||||||||||||||    
T  22403180 tcaactaac-acaatttaattattcataacttcataca 22403144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 168 - 356
Target Start/End: Complemental strand, 27329753 - 27329563
Alignment:
Q  168 acaatttatcaattcacccaattaagcactt-ttcataccaataattgaaaa-ttgcaataagtgattatgatgaattctaacccccttaccttagatag 265  Q
    |||||| ||||||| || ||||||| ||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||    
T  27329753 acaattaatcaatt-acacaattaaacacttattcatacca-taattgaaaaattgcaataagtgattatgatgaattctaacccccttaccttagttag 27329656  T
Q  266 agtaa--tccctagcttaggcttcaattttgctcctagctctcatc-caatccttgattcttcaagttcctcttctctctaacccttttctcct 356  Q
      |||  || |||| || |||||||||||| |||||||||||  || ||||| ||||||||||||| |||||||||||||| | |||| |||||    
T  27329655 gttaatctctctagattgggcttcaattttactcctagctcttctctcaatcattgattcttcaag-tcctcttctctctagctctttcctcct 27329563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 30 - 169
Target Start/End: Original strand, 41212145 - 41212283
Alignment:
Q  30 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatgt 129  Q
    ||||||||||||||| ||||||||||||  |||||||  ||||||||||| |||||||||||||||  ||| ||||| | || |||||||||||||||      
T  41212145 aattgatcatgaaacatatcacaattcatcaacaacagtgcataattcactaattgagcatatttt-tacacatacccatttttcatactttgaacatac 41212243  T
Q  130 gattcaactaacaacaattcaattatccataacttcatac 169  Q
      |||||||||||||||||||||||| |||||||||||||    
T  41212244 agttcaactaacaacaattcaattattcataacttcatac 41212283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 226 - 356
Target Start/End: Original strand, 20346342 - 20346472
Alignment:
Q  226 aagtgattatgatgaattctaacccccttaccttagatagagtaa--tccctagcttaggcttcaattttgctcctagctctcatcc-aatccttgattc 322  Q
    |||||||||||||||||||||||||||||||||||| |||  |||  |||||||||||||||||||||||||||||||||||  ||| || |||||||||    
T  20346342 aagtgattatgatgaattctaacccccttaccttag-taggttaatctccctagcttaggcttcaattttgctcctagctcttctcctaacccttgattc 20346440  T
Q  323 ttcaagttcctcttctctctaacccttttctcct 356  Q
    |||||| ||||||||||| | |||||||||||||    
T  20346441 ttcaag-tcctcttctctat-acccttttctcct 20346472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 15 - 91
Target Start/End: Complemental strand, 35522507 - 35522432
Alignment:
Q  15 tcaacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 91  Q
    ||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  35522507 tcaacaacaac-atcaattgatcatgaaacttatcacaattcaacaacaacaaagcataattcaccaattgagcata 35522432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 16 - 152
Target Start/End: Complemental strand, 51627851 - 51627716
Alignment:
Q  16 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattc-accaattgagcatattttcaacatataccaacttctc 114  Q
    |||||||||| || ||||||||||||| ||||||||||||||| |||| || | |||||||| ||||||||| |||| |||||||||||||||  |||||    
T  51627851 caacaacaac-atcaattgatcatgaatcttatcacaattcaacaacaccatatcataattcaaccaattgaacata-tttcaacatataccattttctc 51627754  T
Q  115 atactttgaacatgtgattcaactaacaacaattcaat 152  Q
    ||||||||||||||   ||  |||||||||||||||||    
T  51627753 atactttgaacatgaagtttcactaacaacaattcaat 51627716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 31 - 168
Target Start/End: Complemental strand, 27329928 - 27329792
Alignment:
Q  31 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaac--ttctcatactttgaacatg 128  Q
    ||||||||||||||||||||||||| || ||||||| ||||||||||||||||||||||||||||| ||||| ||| ||  ||| |||||||||| ||||    
T  27329928 attgatcatgaaacttatcacaatttaacaacaacatagcataattcaccaattgagcatattttc-acata-acccacttttcacatactttgatcatg 27329831  T
Q  129 tgattcaactaacaacaattcaattatccataacttcata 168  Q
       ||  || ||||||||||||||||| ||||||||||||    
T  27329830 aagtttcaccaacaacaattcaattat-cataacttcata 27329792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 168 - 253
Target Start/End: Original strand, 41212331 - 41212415
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaattctaaccccct 253  Q
    |||||| ||||||||| |||||||| ||||| |||||| |||||||||||||| ||| ||||||||||||||||||||||||||||    
T  41212331 acaattaatcaattcatccaattaaacacttatcatacaaataattgaaaattacaa-aagtgattatgatgaattctaaccccct 41212415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 229 - 349
Target Start/End: Complemental strand, 36356217 - 36356096
Alignment:
Q  229 tgattatgatgaattctaacccccttaccttagatagagtaa-tccctagcttaggcttcaattttgctccta-gctctcatccaatccttgattcttca 326  Q
    |||||||||||||||||||||||||||| |||| ||||  || ||||||||| | |||||| ||| ||||||| | |||| |||  | ||||| ||||||    
T  36356217 tgattatgatgaattctaacccccttactttagttagatcaattccctagctcaagcttcactttagctcctaggttctc-tcctcttcttgaatcttca 36356119  T
Q  327 agttcctcttctctctaaccctt 349  Q
    |||||||||||||||||||||||    
T  36356118 agttcctcttctctctaaccctt 36356096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 49 - 165
Target Start/End: Original strand, 20177267 - 20177383
Alignment:
Q  49 cacaattcaataacaacaaagcataattcaccaatt-gagcatattttcaacatataccaacttctcatactttgaacatgtgattcaactaacaacaat 147  Q
    |||||||||| ||||||| ||||||||||| ||||| ||||||| || ||||||||| ||  |||||||||||||||||||  |||  || |||||||||    
T  20177267 cacaattcaacaacaacatagcataattcaacaatttgagcataatt-caacatatatcactttctcatactttgaacatgaaatttcaccaacaacaat 20177365  T
Q  148 tcaattatccataacttc 165  Q
    ||||||||| | ||||||    
T  20177366 tcaattatcaacaacttc 20177383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 168 - 266
Target Start/End: Original strand, 19603357 - 19603455
Alignment:
Q  168 acaatttatcaattcacccaattaagcactt-ttcataccaataattgaaaatt-gcaataagtgattatgatgaattctaacccccttaccttagatag 265  Q
    |||||| ||||||| || ||||||||||||| ||||||| |||||||||||||| ||| ||| |||||||||||||||||| |||||||||||||| |||    
T  19603357 acaattaatcaatt-actcaattaagcacttattcatac-aataattgaaaatttgcactaaatgattatgatgaattctagcccccttaccttagttag 19603454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 186 - 347
Target Start/End: Complemental strand, 22829395 - 22829232
Alignment:
Q  186 caattaagcactt-ttcataccaataattgaaaa-ttgcaataagtgattatgatgaattctaacccccttaccttagatagagtaa-tccctagcttag 282  Q
    ||||||||||||| ||||||| || ||||||||| ||||| ||| |||||||||||||||||||||||||||| |||| ||||  || ||||||||  |     
T  22829395 caattaagcacttattcatac-aacaattgaaaaattgcactaaatgattatgatgaattctaacccccttactttagttagatcaattccctagcccaa 22829297  T
Q  283 gcttcaattttgctcctagctctcatccaatccttgattcttcaagttcctcttctctctaaccc 347  Q
    |||||| ||| ||||||||    | |||  | ||||| |||||||| ||||||||||||||||||    
T  22829296 gcttcactttagctcctaggatccttcctcttcttgaatcttcaagctcctcttctctctaaccc 22829232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 30 - 156
Target Start/End: Original strand, 16656711 - 16656837
Alignment:
Q  30 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaa-ttgagcatattttcaacatataccaacttctcatactttgaacatg 128  Q
    |||||| |||||| ||||||||||||||| ||||||| ||||||||| | ||| |||||||||  ||||||||||| ||  ||||||||||||||||| |    
T  16656711 aattgaacatgaatcttatcacaattcaacaacaacatagcataattgatcaatttgagcata-attcaacatatatcactttctcatactttgaacacg 16656809  T
Q  129 tgattcaactaacaacaattcaattatc 156  Q
       ||  || ||||||||||||||||||    
T  16656810 aagtttcaccaacaacaattcaattatc 16656837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 167
Target Start/End: Original strand, 16645985 - 16646122
Alignment:
Q  30 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaa-ttgagcatattttcaacatataccaacttctcatactttgaacatg 128  Q
    |||||| |||||| ||||||||||||||| ||||||| ||||||||| | ||| ||||| |||  ||||||||||| ||  |||||||||||||||||||    
T  16645985 aattgaacatgaatcttatcacaattcaacaacaacatagcataattaatcaatttgagaata-attcaacatatatcactttctcatactttgaacatg 16646083  T
Q  129 tgattcaactaacaacaattcaattatccataacttcat 167  Q
      |||  || |||| ||||| ||||||| | ||||||||    
T  16646084 aaattttaccaacatcaattaaattatcaacaacttcat 16646122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 186 - 301
Target Start/End: Complemental strand, 20955409 - 20955292
Alignment:
Q  186 caattaagcactt-ttcataccaataattgaaaatt-gcaataagtgattatgatgaattctaacccccttaccttagatagagtaa-tccctagcttag 282  Q
    ||||||||||||| ||||||| || ||||||||||| ||| ||| ||||||||||||||| ||||||||||||||||| ||||  || ||||||||| |     
T  20955409 caattaagcacttattcatac-aacaattgaaaatttgcactaaatgattatgatgaattataacccccttaccttagttagatcaattccctagctcaa 20955311  T
Q  283 gcttcaattttgctcctag 301  Q
    |||||| ||| ||||||||    
T  20955310 gcttcactttagctcctag 20955292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 124 - 170
Target Start/End: Complemental strand, 35522432 - 35522386
Alignment:
Q  124 acatgtgattcaactaacaacaattcaattatccataacttcataca 170  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||    
T  35522432 acatgtaattcaactaacaacaattcaattatccataacttcataca 35522386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 15861607 - 15861547
Alignment:
Q  31 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 91  Q
    |||||||||||||| ||||||||||||  |||||| | |||||||||||||||||||||||    
T  15861607 attgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 15861547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 229 - 331
Target Start/End: Complemental strand, 20893582 - 20893479
Alignment:
Q  229 tgattatgatgaattctaacccccttaccttag--atagagtaatccctagcttaggcttcaattttgctcct-agctctcatccaatccttgattcttc 325  Q
    |||||||||||||  ||||||||||||||||||  | ||| ||||||| | ||||||||||||||| |||||| ||||| | |||||| |||||||||||    
T  20893582 tgattatgatgaagactaacccccttaccttaggtaaagattaatccc-aacttaggcttcaatttagctcctaagctcac-tccaattcttgattcttc 20893485  T
Q  326 aagttc 331  Q
    ||||||    
T  20893484 aagttc 20893479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 156
Target Start/End: Complemental strand, 37234047 - 37233908
Alignment:
Q  16 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaatt-gagcatattttcaacatataccaacttctc 114  Q
    |||||||||| || |||||| |||||| || ||||||||||||  |||||| ||||||||||| || || |||||||  ||||||||||| ||  |||      
T  37234047 caacaacaac-atcaattgaacatgaatctcatcacaattcaaccacaacatagcataattcaacatttagagcata-attcaacatatatcactttcat 37233950  T
Q  115 atactttgaacatgtgattcaactaacaacaattcaattatc 156  Q
    ||||||||||||||  |||  || ||||||||||||||||||    
T  37233949 atactttgaacatgcaattttaccaacaacaattcaattatc 37233908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 35 - 91
Target Start/End: Original strand, 21860089 - 21860145
Alignment:
Q  35 atcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 91  Q
    |||||||||| ||||||||||||  |||||| | |||||||||||||||||||||||    
T  21860089 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 21860145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 229 - 349
Target Start/End: Complemental strand, 37844405 - 37844284
Alignment:
Q  229 tgattatgatgaattctaacccccttaccttagatagag--taatccctagcttaggcttcaattttgctccta-gctctcatccaatccttgattcttc 325  Q
    |||||||||| ||  ||||||||||||||||||||| |   ||||||| | ||||||||||||||| ||||||| |||| | ||||||||||  ||||||    
T  37844405 tgattatgataaagactaacccccttaccttagataaaaattaatcccaa-cttaggcttcaatttagctcctaagctcac-tccaatccttagttcttc 37844308  T
Q  326 aagttcctcttctctctaaccctt 349  Q
    ||||||  |||||||| |||||||    
T  37844307 aagttctccttctctcaaaccctt 37844284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 44035152 - 44035092
Alignment:
Q  31 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 91  Q
    |||||||||||||| ||||||||||||  |||||| | |||||||||||||| ||||||||    
T  44035152 attgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaaatgagcata 44035092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 229 - 266
Target Start/End: Original strand, 16646235 - 16646272
Alignment:
Q  229 tgattatgatgaattctaacccccttaccttagataga 266  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  16646235 tgattatgatgaattctaacccccttaccttagttaga 16646272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 229 - 266
Target Start/End: Original strand, 16656961 - 16656998
Alignment:
Q  229 tgattatgatgaattctaacccccttaccttagataga 266  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  16656961 tgattatgatgaattctaacccccttaccttagttaga 16656998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 22367093 - 22367152
Alignment:
Q  31 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 91  Q
    |||||||||||||| ||||||||||||  |||||| | |||| ||||||||||||||||||    
T  22367093 attgatcatgaaacatatcacaattcatcaacaaccatgcat-attcaccaattgagcata 22367152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 15 - 66
Target Start/End: Complemental strand, 9784288 - 9784238
Alignment:
Q  15 tcaacaacaaccatgaattgatcatgaaacttatcacaattcaataacaaca 66  Q
    ||||||||||| || |||||||| |||||||||||||||||||| |||||||    
T  9784288 tcaacaacaac-atcaattgatcttgaaacttatcacaattcaacaacaaca 9784238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 229 - 349
Target Start/End: Complemental strand, 38033598 - 38033476
Alignment:
Q  229 tgattatgatgaattctaaccccctt-accttagatagagtaat-ccctagcttaggcttcaattttgctcctagct-ctcatccaatccttgattcttc 325  Q
    |||||||||||||||||||||||||| ||||||| || |  ||| |||||| |   |||||| ||| |||||||| | ||| |||  | ||||| |||||    
T  38033598 tgattatgatgaattctaaccccctttaccttagttatatcaattccctagttcgagcttcactttagctcctaggttctc-tcctcttcttgaatcttc 38033500  T
Q  326 aagttcctcttctctctaaccctt 349  Q
    ||||||||||||||||||||||||    
T  38033499 aagttcctcttctctctaaccctt 38033476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 309 - 356
Target Start/End: Original strand, 41212421 - 41212467
Alignment:
Q  309 ccaatccttgattcttcaagttcctcttctctctaacccttttctcct 356  Q
    ||||||||||||||||||| | ||||||||||||||||||| ||||||    
T  41212421 ccaatccttgattcttcaaat-cctcttctctctaacccttatctcct 41212467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 261
Target Start/End: Original strand, 17609205 - 17609282
Alignment:
Q  186 caattaagcacttt-tcataccaataattgaaaa-ttgcaataagtgattatgat-gaattctaacccccttaccttag 261  Q
    |||||||||||||  |||||| |||||||||||| || || ||| |||||||||| |||||||||||||||||||||||    
T  17609205 caattaagcacttaatcatac-aataattgaaaaattacactaaatgattatgattgaattctaacccccttaccttag 17609282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 349
Target Start/End: Original strand, 20913351 - 20913459
Alignment:
Q  244 ctaacccccttaccttagat--agagtaatccctagcttaggcttcaattttgctcct-agctctcatccaatccttgattcttcaagtt---cctcttc 337  Q
    ||||||||||||||||||||  ||| ||||||| | ||||||||||| ||| |||||| ||||| | |||||| ||||||||||||| ||   |||||||    
T  20913351 ctaacccccttaccttagataaagattaatccc-aacttaggcttcactttagctcctaagctcac-tccaat-cttgattcttcaatttctccctcttc 20913447  T
Q  338 tctctaaccctt 349  Q
    ||||||||||||    
T  20913448 tctctaaccctt 20913459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 319 - 349
Target Start/End: Original strand, 21860427 - 21860457
Alignment:
Q  319 attcttcaagttcctcttctctctaaccctt 349  Q
    |||||||||||||||||||||||||||||||    
T  21860427 attcttcaagttcctcttctctctaaccctt 21860457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 319 - 349
Target Start/End: Original strand, 41218821 - 41218851
Alignment:
Q  319 attcttcaagttcctcttctctctaaccctt 349  Q
    |||||||||||||||||||||||||||||||    
T  41218821 attcttcaagttcctcttctctctaaccctt 41218851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 319 - 349
Target Start/End: Complemental strand, 44034810 - 44034780
Alignment:
Q  319 attcttcaagttcctcttctctctaaccctt 349  Q
    |||||||||||||||||||||||||||||||    
T  44034810 attcttcaagttcctcttctctctaaccctt 44034780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 283 - 351
Target Start/End: Original strand, 20177553 - 20177622
Alignment:
Q  283 gcttcaattttgctcctagc-tctcatccaatccttgattcttcaagttcctcttctctctaaccctttt 351  Q
    |||||| ||| ||||||||  |||| |||||| ||||| |||||||| || |||||||||||||||||||    
T  20177553 gcttcactttagctcctaggatctcttccaattcttgaatcttcaagctcttcttctctctaaccctttt 20177622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 206 - 260
Target Start/End: Complemental strand, 37233810 - 37233754
Alignment:
Q  206 caataattgaaaa-ttgcaataagtgattatgat-gaattctaacccccttacctta 260  Q
    ||||||||||||| || || ||| |||||||||| ||||||||||||||||||||||    
T  37233810 caataattgaaaaattacactaaatgattatgattgaattctaacccccttacctta 37233754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 166; Significance: 9e-89; HSPs: 115)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 166; E-Value: 9e-89
Query Start/End: Original strand, 168 - 361
Target Start/End: Original strand, 8632050 - 8632243
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagatagag 267  Q
    |||||| || |||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  8632050 acaattaattaattcatccaattaagcacttttcatacaaataattgaaaattgcaataagtgattatgatgaatcctaacccccttaccttagatagag 8632149  T
Q  268 taatccctagcttaggcttcaattttgctcctagctctcatccaatccttgattcttcaagttcctcttctctctaacccttttctcctttgct 361  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  8632150 taatccctagcttaggcttcaattttgctcctagctctcacccaatccttgattcttcaagttcctcttctctctaacccttttctcctgtgct 8632243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 168 - 352
Target Start/End: Complemental strand, 14528067 - 14527881
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaa-ttgcaataagtgattatgatgaattctaacccccttaccttagataga 266  Q
    |||||| ||||||||||| ||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  14528067 acaattaatcaattcacctaattaagcacttttcatac-aataattgaaaaattgcaataaatgattatgatgaattctaacccccttaccttagttaga 14527969  T
Q  267 gtaatc--cctagcttaggcttcaattttgctcctagctctcatccaatccttgattcttcaagttcctcttctctctaacccttttc 352  Q
     |||||  ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||| |||||    
T  14527968 ttaatctccctagcttaggcttcaattttgctcctagctctcccccaatccttgattcttcaagttcctcttctctctaaccattttc 14527881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 168 - 356
Target Start/End: Original strand, 35123955 - 35124144
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaa-ttgcaataagtgattatgatgaattctaacccccttaccttagataga 266  Q
    |||||| ||||||||||||||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||||||| ||||||||| ||||    
T  35123955 acaattaatcaattcacccaattaagcacttttcatacaaataattgaaaaattgcaataa-tgattatgatgaattctaacccctttaccttagttaga 35124053  T
Q  267 gtaatc--cctagcttaggcttcaattttgctcctagctctcatccaatccttgattcttcaagttcctcttctctctaacccttttctcct 356  Q
     |||||  ||||||||||||||||||||||||||||||||||   ||||||||||||||||||| |||||||||||||||||||||||||||    
T  35124054 ttaatctccctagcttaggcttcaattttgctcctagctctctctcaatccttgattcttcaag-tcctcttctctctaacccttttctcct 35124144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 168 - 350
Target Start/End: Complemental strand, 50112038 - 50111855
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagatagag 267  Q
    |||||| ||||||||| ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||      
T  50112038 acaattaatcaattcatccaattaagcacttttcatacaaataattgaaaattacaataagtgattatgatgaattctaacccccttaccttagttaggt 50111939  T
Q  268 taa--tccctagcttaggcttcaattttgctcctagctctcatccaatccttgattcttcaagttcctcttctctctaacccttt 350  Q
    |||  || ||||||||||||||||||||||||||||||||| | ||  |||||||||||||||||||||||||||||||||||||    
T  50111938 taatctctctagcttaggcttcaattttgctcctagctctc-ttcacaccttgattcttcaagttcctcttctctctaacccttt 50111855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 15 - 170
Target Start/End: Complemental strand, 12349727 - 12349573
Alignment:
Q  15 tcaacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctc 114  Q
    ||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  12349727 tcaacaacaac-atcaattgatcatgaaacttatcacaattcaacaacaacaaagcataattcaccaattgagcatattttcaacatataacaacttctc 12349629  T
Q  115 atactttgaacatgtgattcaactaacaacaattcaattatccataacttcataca 170  Q
    | ||||||||||||| ||||||||||||||||||||||||||||||| || |||||    
T  12349628 acactttgaacatgtaattcaactaacaacaattcaattatccataaatttataca 12349573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 168 - 357
Target Start/End: Original strand, 3578348 - 3578540
Alignment:
Q  168 acaatttatcaattcacccaattaagcactt-ttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagataga 266  Q
    |||||| ||||||| |||||||||||||||| ||| ||| ||||||||||||||||||||| |||||||||||||||||||||| |||||||||| ||||    
T  3578348 acaattaatcaatttacccaattaagcacttattcctac-aataattgaaaattgcaataaatgattatgatgaattctaacccgcttaccttagttaga 3578446  T
Q  267 gtaa--tccctagcttaggcttcaattttgctcctagctctcatccaatccttgattcttcaagttc-ctcttctctctaacccttttctcctt 357  Q
     |||  ||||||||||||||||||||||| ||| |||||||| |||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  3578447 ttaatctccctagcttaggcttcaatttttctcatagctctcttccaatccttgattcttcaagttctcccttctctctaacccttttctcctt 3578540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 168 - 352
Target Start/End: Original strand, 14295699 - 14295884
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaa-ttgcaataagtgattatgatgaattctaacccccttaccttagataga 266  Q
    |||||| ||||||||||||| || |||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  14295699 acaattaatcaattcacccattttagcacttttcatac-aataattgaaaaattgcaataa-tgattatgatgaattctaacccccttaccttagttaga 14295796  T
Q  267 gtaatc--cctagcttaggcttcaattttgctcctagctctcatccaatccttgattcttcaagttcctcttctctctaacccttttc 352  Q
     |||||  ||||| ||||| |||||||| |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  14295797 ttaatctccctagattagggttcaatttagctcctagctctcccccaatccttgattcttcaagttcctcttctctctaacccttttc 14295884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 168 - 352
Target Start/End: Original strand, 14301326 - 14301511
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaa-ttgcaataagtgattatgatgaattctaacccccttaccttagataga 266  Q
    |||||| ||||||||||||| || |||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  14301326 acaattaatcaattcacccattttagcacttttcatac-aataattgaaaaattgcaataa-tgattatgatgaattctaacccccttaccttagttaga 14301423  T
Q  267 gtaatc--cctagcttaggcttcaattttgctcctagctctcatccaatccttgattcttcaagttcctcttctctctaacccttttc 352  Q
     |||||  ||||| ||||| |||||||| |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  14301424 ttaatctccctagattagggttcaatttagctcctagctctcccccaatccttgattcttcaagttcctcttctctctaacccttttc 14301511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 30 - 170
Target Start/End: Original strand, 54424085 - 54424225
Alignment:
Q  30 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatgt 129  Q
    ||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  54424085 aattgatcatgaaacttatcacaattcatcaacaacatagcataattcaccaattgagcatattttcaacatatatcaatttctcatactttgaacatgt 54424184  T
Q  130 gattcaactaacaacaattcaattatccataacttcataca 170  Q
     ||||||||||| ||||||||||||||||||||||||||||    
T  54424185 aattcaactaaccacaattcaattatccataacttcataca 54424225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 175 - 357
Target Start/End: Complemental strand, 17522869 - 17522685
Alignment:
Q  175 atcaattcacccaattaagcacttttcataccaataattgaaaa-ttgcaataagtgattatgatgaattctaacccccttaccttagatagagtaatc- 272  Q
    |||||||||||||| ||||||||| |||||| |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| || | |||||     
T  17522869 atcaattcacccaaataagcacttctcatac-aataattgaaaaattgcaataa-tgattatgatgaattctaacccccttaccttagttatattaatct 17522772  T
Q  273 -cctagcttaggcttcaattttgctcctagctctcatccaatccttgattcttcaagttc-ctcttctctctaacccttttctcctt 357  Q
     ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  17522771 ccctagcttaggcttcaattttgctcctagctctcccccaatccttgattcttcaagttctcccttctctctaacccttttctcctt 17522685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 168 - 350
Target Start/End: Complemental strand, 6146756 - 6146572
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagatagag 267  Q
    |||||| ||||||||| ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||      
T  6146756 acaattaatcaattcatccaattaagcacttttcatacaaataattgaaaattacaataagtgattatgatgaattctaacccccttaccttagttaggt 6146657  T
Q  268 taa--tccctagcttaggcttcaattttgctcctagctc-tcatccaatccttgattcttcaagttcctcttctctctaacccttt 350  Q
    |||  || ||||||||||||||||||||||||||||||| ||  |||| ||||||||||||||| ||||||||||| |||||||||    
T  6146656 taatctctctagcttaggcttcaattttgctcctagctcttctcccaacccttgattcttcaag-tcctcttctctataacccttt 6146572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 168 - 356
Target Start/End: Complemental strand, 16181933 - 16181747
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagatagag 267  Q
    |||||| ||||||||| |||||||||||||| |||||| |||||||||||||| ||| |||||||||||||||||||||||||||||||||||| ||||     
T  16181933 acaattaatcaattcatccaattaagcacttatcatacaaataattgaaaattacaa-aagtgattatgatgaattctaacccccttaccttag-tagat 16181836  T
Q  268 taa--tccctagcttaggcttcaattttgctcctagctctc-atccaatccttgattcttcaagttcctcttctctctaacccttttctcct 356  Q
    |||  |||||||||||||||||||||||||||||||||||| |||  | ||||||||||||||| |||||||||||||||||||||||||||    
T  16181835 taatctccctagcttaggcttcaattttgctcctagctctctatc--acccttgattcttcaag-tcctcttctctctaacccttttctcct 16181747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 168 - 356
Target Start/End: Original strand, 14304308 - 14304496
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattg-aaaattgcaataagtgattatgatgaattctaacccccttaccttagataga 266  Q
    |||||| ||||||||||||||||||||||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||| |||     
T  14304308 acaattaatcaattcacccaattaagcacttttcatacaaataattgaaaaattgcaataa-tgattatgatgaattctaacccccttaccttagttagg 14304406  T
Q  267 gtaa--tccctagcttaggcttcaattttgctcctagctctcatccaatccttgattcttcaagttcctcttctctctaacccttttctcct 356  Q
     |||  || |||||||||||||||||||| |||||||||||| | ||  ||||||||||||||| |||||||||||||||||||||||||||    
T  14304407 ttaatctctctagcttaggcttcaatttttctcctagctctc-ttcaccccttgattcttcaag-tcctcttctctctaacccttttctcct 14304496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 168 - 329
Target Start/End: Original strand, 17938833 - 17938994
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagatagag 267  Q
    |||||| || |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||  |||||||||||| ||||||| |||    
T  17938833 acaattaattaattcacccaattaagcacttttcatacaaataattgaaaattgcaataagtgattatgatgaaccctaacccccttatcttagatggag 17938932  T
Q  268 taatccctagcttaggcttcaattttgctcctagctctcatccaatccttgattcttcaagt 329  Q
    |||||||||||||| ||||||||||||||||||||||     ||| ||||||||||||||||    
T  17938933 taatccctagcttaagcttcaattttgctcctagctcaaccacaacccttgattcttcaagt 17938994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 38 - 170
Target Start/End: Original strand, 8631871 - 8632003
Alignment:
Q  38 atgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatgtgattcaac 137  Q
    ||||||||||||||||| ||| |||||||||||||||||||| || | |||||||||||||||||||||||||||||| ||||||||||||| |||||||    
T  8631871 atgaaacttatcacaatccaacaacaacaaagcataattcactaaataagcatattttcaacatataccaacttctcaaactttgaacatgtaattcaac 8631970  T
Q  138 taacaacaattcaattatccataacttcataca 170  Q
    |||||||||||||||||||||||||||||||||    
T  8631971 taacaacaattcaattatccataacttcataca 8632003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 30 - 170
Target Start/End: Original strand, 17100726 - 17100866
Alignment:
Q  30 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatgt 129  Q
    ||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||||||||| ||||| |  | |||||||||||||||||    
T  17100726 aattgatcatgaaacttatcacaattcatcaacaacatagcataattcaccaattgagcatattttcaacacatacccatgtttcatactttgaacatgt 17100825  T
Q  130 gattcaactaacaacaattcaattatccataacttcataca 170  Q
     ||||||||||||||||||||||||||||||||||||||||    
T  17100826 aattcaactaacaacaattcaattatccataacttcataca 17100866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 30 - 170
Target Start/End: Original strand, 17101411 - 17101551
Alignment:
Q  30 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatgt 129  Q
    ||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||||||||| ||||| |  | |||||||||||||||||    
T  17101411 aattgatcatgaaacttatcacaattcatcaacaacatagcataattcaccaattgagcatattttcaacacatacccatgtttcatactttgaacatgt 17101510  T
Q  130 gattcaactaacaacaattcaattatccataacttcataca 170  Q
     ||||||||||||||||||||||||||||||||||||||||    
T  17101511 aattcaactaacaacaattcaattatccataacttcataca 17101551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 168 - 356
Target Start/End: Original strand, 54424272 - 54424461
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagatagag 267  Q
    |||||| ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||      
T  54424272 acaattaatcaattcacccaattaagcacttttcatacaaataattgaaaattgaaataagtgattatgatgaattctaacccccttaccttagttaggt 54424371  T
Q  268 taa--tccctagcttaggcttcaattttgctcctagctc-tcatccaatccttgattcttcaagttcctcttctctctaacccttttctcct 356  Q
    |||  || ||||||||| |||||||||||| |||||||| ||  |||||||||||||||| ||| ||||||||||| | |||||||||||||    
T  54424372 taatctctctagcttagacttcaattttgcgcctagctcttctcccaatccttgattctttaag-tcctcttctctgt-acccttttctcct 54424461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 168 - 350
Target Start/End: Complemental strand, 6154318 - 6154134
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagatagag 267  Q
    |||||| ||||||||| ||||||||||||||||||||  ||||||||||||||  ||||||||||||||||||||||||||||||||||||||| |||      
T  6154318 acaattaatcaattcatccaattaagcacttttcatagaaataattgaaaattataataagtgattatgatgaattctaacccccttaccttagttaggt 6154219  T
Q  268 ta--atccctagcttaggcttcaattttgctcctagctc-tcatccaatccttgattcttcaagttcctcttctctctaacccttt 350  Q
    ||  ||| |||||||||||||||||||||||||||| || ||  |||| ||||||||||||||| |||||||||||||||||||||    
T  6154218 taatatctctagcttaggcttcaattttgctcctagatcttctcccaacccttgattcttcaag-tcctcttctctctaacccttt 6154134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 17 - 170
Target Start/End: Original strand, 14295499 - 14295652
Alignment:
Q  17 aacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattca-ccaattgagcatattttcaacatataccaacttctca 115  Q
    ||||||||| || ||||||||||||| ||||||||||||||| ||||||| ||||||||||| |||||||||||||||||||||||||||||  ||||||    
T  14295499 aacaacaac-atcaattgatcatgaatcttatcacaattcaacaacaacatagcataattcaaccaattgagcatattttcaacatataccattttctca 14295597  T
Q  116 tactttgaacatgtgattcaactaacaacaattcaattatccataacttcataca 170  Q
    |||||||||||||   |||||||||||||||||||||||||||||||||||||||    
T  14295598 tactttgaacatgaatttcaactaacaacaattcaattatccataacttcataca 14295652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 17 - 170
Target Start/End: Original strand, 14301126 - 14301279
Alignment:
Q  17 aacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattca-ccaattgagcatattttcaacatataccaacttctca 115  Q
    ||||||||| || ||||||||||||| ||||||||||||||| ||||||| ||||||||||| |||||||||||||||||||||||||||||  ||||||    
T  14301126 aacaacaac-atcaattgatcatgaatcttatcacaattcaacaacaacatagcataattcaaccaattgagcatattttcaacatataccattttctca 14301224  T
Q  116 tactttgaacatgtgattcaactaacaacaattcaattatccataacttcataca 170  Q
    |||||||||||||   |||||||||||||||||||||||||||||||||||||||    
T  14301225 tactttgaacatgaatttcaactaacaacaattcaattatccataacttcataca 14301279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 16 - 170
Target Start/End: Complemental strand, 50112238 - 50112085
Alignment:
Q  16 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctca 115  Q
    |||||||||| || ||||||||||||||||||||||||||||  |||||||| |||||||||||||||||||||||||||||||| ||||| | || |||    
T  50112238 caacaacaac-atcaattgatcatgaaacttatcacaattcatcaacaacaatgcataattcaccaattgagcatattttcaacacatacccatttttca 50112140  T
Q  116 tactttgaacatgtgattcaactaacaacaattcaattatccataacttcataca 170  Q
    |||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||    
T  50112139 tactttgaacatgtaattcaaccaacaacaattcaattattcataacttcataca 50112085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 167 - 356
Target Start/End: Original strand, 13817770 - 13817958
Alignment:
Q  167 tacaatttatcaattcacccaattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagataga 266  Q
    ||||||| ||||||||| |||||||||||||| |||||| |||||||||||||| ||| |||||||||||||||||||||||||||||||||||| |||     
T  13817770 tacaattaatcaattcatccaattaagcacttatcatacaaataattgaaaattacaa-aagtgattatgatgaattctaacccccttaccttag-tagg 13817867  T
Q  267 gtaa--tccctagcttaggcttcaattttgctcctagctctcatccaatccttgattcttcaagttcctcttctctctaacccttttctcct 356  Q
     |||  |||||||||||| |||||||||||||| |||||     |||||||||||||||||||| |||||||||||||||||||||||||||    
T  13817868 ttaatctccctagcttagacttcaattttgctcatagcttaaccccaatccttgattcttcaag-tcctcttctctctaacccttttctcct 13817958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 168 - 343
Target Start/End: Original strand, 17100913 - 17101089
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagatagag 267  Q
    |||||| ||||||||||||||||||||||||||||||| || |||||||||| ||||||||||||||||||||||||||||||||||||||||| |||      
T  17100913 acaattaatcaattcacccaattaagcacttttcatacaaa-aattgaaaatagcaataagtgattatgatgaattctaacccccttaccttagttaggt 17101011  T
Q  268 taa--tccctagcttaggcttcaattttgctcctagctc-tcatccaatccttgattcttcaagttcctcttctctcta 343  Q
    |||  || ||||||||| ||||||||||||||||||||| ||  |||| ||||||||||||||| ||||||||||||||    
T  17101012 taatttctctagcttagacttcaattttgctcctagctcttctcccaacccttgattcttcaag-tcctcttctctcta 17101089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 168 - 343
Target Start/End: Original strand, 17101598 - 17101774
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagatagag 267  Q
    |||||| ||||||||||||||||||||||||||||||| || |||||||||| ||||||||||||||||||||||||||||||||||||||||| |||      
T  17101598 acaattaatcaattcacccaattaagcacttttcatacaaa-aattgaaaatagcaataagtgattatgatgaattctaacccccttaccttagttaggt 17101696  T
Q  268 taa--tccctagcttaggcttcaattttgctcctagctc-tcatccaatccttgattcttcaagttcctcttctctcta 343  Q
    |||  || ||||||||| ||||||||||||||||||||| ||  |||| ||||||||||||||| ||||||||||||||    
T  17101697 taatttctctagcttagacttcaattttgctcctagctcttctcccaacccttgattcttcaag-tcctcttctctcta 17101774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 31 - 170
Target Start/End: Complemental strand, 19261012 - 19260873
Alignment:
Q  31 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatgtg 130  Q
    |||||||||||||||||||||||||||  ||||||  || |||||||||||||||||||||||||||||| ||||| | || |||||||||||||||||     
T  19261012 attgatcatgaaacttatcacaattcatcaacaacttagtataattcaccaattgagcatattttcaacacatacccatttttcatactttgaacatgta 19260913  T
Q  131 attcaactaacaacaattcaattatccataacttcataca 170  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  19260912 attcaactaacaacaattcaattatccataacttcataca 19260873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 170 - 356
Target Start/End: Complemental strand, 16996045 - 16995860
Alignment:
Q  170 aatttatcaattcacccaattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagatagagta 269  Q
    |||| ||||||||| |||||||||||||| |||||| |||||||||||||| ||| |||||||||||||||||||||||||||||||||||| |||  ||    
T  16996045 aattaatcaattcatccaattaagcacttatcatacaaataattgaaaattacaa-aagtgattatgatgaattctaacccccttaccttag-tagctta 16995948  T
Q  270 atc--cctagcttaggcttcaattttgctcctagctc-tcatccaatccttgattcttcaagttcctcttctctctaacccttttctcct 356  Q
    |||  |||||||||||||||||||||||||||||||| ||  |||| ||||||||||||||| ||||||||||||| |||||||||||||    
T  16995947 atctacctagcttaggcttcaattttgctcctagctcttctcccaacccttgattcttcaag-tcctcttctctct-acccttttctcct 16995860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 15 - 170
Target Start/End: Original strand, 35123755 - 35123908
Alignment:
Q  15 tcaacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctc 114  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||  ||| ||    
T  35123755 tcaacaacaac-atcaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacacatacc--cttttc 35123851  T
Q  115 atac-tttgaacatgtgattcaactaacaacaattcaattatccataacttcataca 170  Q
    ||||  || ||||||| |||| |||||||||||||||||||||||||| ||||||||    
T  35123852 atacactttaacatgtaattcgactaacaacaattcaattatccataatttcataca 35123908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 168 - 356
Target Start/End: Complemental strand, 317496 - 317309
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagatagag 267  Q
    |||||| ||||||||| |||||||||||||| |||||| |||||||||||||| ||| |||||||||||||||||||||||||||||||||||| |||      
T  317496 acaattaatcaattcatccaattaagcacttatcatacaaataattgaaaattacaa-aagtgattatgatgaattctaacccccttaccttag-taggt 317399  T
Q  268 taa--tccctagcttaggcttcaattttgctcctagctc-tcatccaatccttgattcttcaagttcctcttctctctaacccttttctcct 356  Q
    |||  |||||||||||||||||||||||||||||||||| ||  |||| ||||||||||||||| ||||| ||||||| |||||||||||||    
T  317398 taatctccctagcttaggcttcaattttgctcctagctcttctcccaacccttgattcttcaag-tcctcatctctct-acccttttctcct 317309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 168 - 356
Target Start/End: Complemental strand, 34439329 - 34439140
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagatagag 267  Q
    |||||| ||||||||| |||||||| |||||||||||| |||||||||||||| |||||||||||||||||||||||||| | ||||||||||| |||      
T  34439329 acaattaatcaattcatccaattaaacacttttcatacaaataattgaaaattacaataagtgattatgatgaattctaatctccttaccttag-taggt 34439231  T
Q  268 taa--tccctagcttaggcttcaattttgctcctagctc-tcatccaatccttgattcttcaagttcctcttctctctaacccttttctcct 356  Q
    |||  || ||||| ||||||||||||||||||||||||| ||  |||| ||||||||||||||||| ||||||||||||| |||||||||||    
T  34439230 taatctctctagcataggcttcaattttgctcctagctcttctcccaacccttgattcttcaagtt-ctcttctctctaatccttttctcct 34439140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 168 - 356
Target Start/End: Original strand, 38527988 - 38528175
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagatagag 267  Q
    |||||| ||||||||| ||||||||||||||||||||| |||| ||||||||| ||| |||||||||||||||||||||||||||||||||||| |||      
T  38527988 acaattaatcaattcatccaattaagcacttttcatacaaatagttgaaaattacaa-aagtgattatgatgaattctaacccccttaccttag-taggt 38528085  T
Q  268 taa--tccctagcttaggcttcaattttgctcctagctc-tcatccaatccttgattcttcaagttcctcttctctctaacccttttctcct 356  Q
    |||  ||||||||||| |||||||||||||||||||||| ||  |||| ||||||||||||||| ||||||||||||| |||||||||||||    
T  38528086 taatctccctagcttaagcttcaattttgctcctagctcttctcccaacccttgattcttcaag-tcctcttctctct-acccttttctcct 38528175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 16 - 170
Target Start/End: Complemental strand, 17523076 - 17522923
Alignment:
Q  16 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctca 115  Q
    |||||||||| || ||||| ||||||||||||||||||||||  || |||| ||||||||||||||||||||||||||||||||||||||||  || | |    
T  17523076 caacaacaac-atcaattggtcatgaaacttatcacaattcatcaataacatagcataattcaccaattgagcatattttcaacatataccattttgtta 17522978  T
Q  116 tactttgaacatgtgattcaactaacaacaattcaattatccataacttcataca 170  Q
    |||||||||||||| |||||||||||||||||||||||||||| | |||||||||    
T  17522977 tactttgaacatgtaattcaactaacaacaattcaattatccacatcttcataca 17522923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 217 - 352
Target Start/End: Complemental strand, 55440796 - 55440659
Alignment:
Q  217 aattgcaataagtgattatgatgaattctaacccccttaccttagatagagtaatc--cctagcttaggcttcaattttgctcctagctctcatccaatc 314  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||  |||||| ||||||||||||||||||||||||||| |||||||    
T  55440796 aattgcaataaatgattatgatgaattctaacccccttaccttagttagattaatctccctagcctaggcttcaattttgctcctagctctcttccaatc 55440697  T
Q  315 cttgattcttcaagttcctcttctctctaacccttttc 352  Q
    |||||||||||||||||||||||| |||| || |||||    
T  55440696 cttgattcttcaagttcctcttctttctaccctttttc 55440659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 168 - 352
Target Start/End: Complemental strand, 12560223 - 12560037
Alignment:
Q  168 acaatttatcaattcacccaattaagcactt-ttcataccaataattgaaaa-ttgcaataagtgattatgatgaattctaacccccttaccttagatag 265  Q
    |||||| ||||||| || ||||||||||||| ||||||| |||||||||||| ||||||||| ||||||||||||||| ||||||||||||||||| |||    
T  12560223 acaattaatcaatt-actcaattaagcacttattcatac-aataattgaaaaattgcaataaatgattatgatgaattttaacccccttaccttagttag 12560126  T
Q  266 agtaatc--cctagcttaggcttcaattttgctcctagctctcatccaatccttgattcttcaagttcctcttctctctaacccttttc 352  Q
    | |||||  |||| |||| |||||||||| |||| ||| |||| ||||||||||||||||||||||||| |||||||||||||||||||    
T  12560125 attaatctccctaacttaagcttcaatttagctcatagttctcttccaatccttgattcttcaagttccccttctctctaacccttttc 12560037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 168 - 304
Target Start/End: Complemental strand, 12349526 - 12349388
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagatagag 267  Q
    |||||| || |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||      
T  12349526 acaattaattaattcacccaattaagcacttttcatacaaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagttaggt 12349427  T
Q  268 taa--tccctagcttaggcttcaattttgctcctagctc 304  Q
    |||  || |||||||| |||||||| |||||||||||||    
T  12349426 taatctctctagcttaagcttcaatattgctcctagctc 12349388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 170 - 356
Target Start/End: Complemental strand, 19570674 - 19570490
Alignment:
Q  170 aatttatcaattcacccaattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagatagagta 269  Q
    |||| ||||||||| |||||||||||||| |||||| |||||||||||||| ||| |||||||||||||||||||||| ||||||||||||| |||  ||    
T  19570674 aattaatcaattcatccaattaagcacttatcatacaaataattgaaaattacaa-aagtgattatgatgaattctaa-ccccttaccttag-taggtta 19570578  T
Q  270 a--tccctagcttaggcttcaattttgctcctagctctcatccaatccttgattcttcaagttcctcttctctctaacccttttctcct 356  Q
    |  ||||||||| |||||| ||||||||||||||||     |||||||||||||||||||| |||||||||||||||||||||||||||    
T  19570577 atctccctagctaaggcttgaattttgctcctagcttaaccccaatccttgattcttcaag-tcctcttctctctaacccttttctcct 19570490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 30 - 170
Target Start/End: Original strand, 14298494 - 14298634
Alignment:
Q  30 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatgt 129  Q
    ||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||  || | |  ||  | |||||||||||||    
T  14298494 aattgatcatgaaacttatcacaattcgacaacaacaaagcataattcaccaattgagcatattttcaacacgtaaccatatcatacactttgaacatgt 14298593  T
Q  130 gattcaactaacaacaattcaattatccataacttcataca 170  Q
     ||||||||||| ||||||||||||||||||||||||||||    
T  14298594 aattcaactaaccacaattcaattatccataacttcataca 14298634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 30 - 170
Target Start/End: Original strand, 14304121 - 14304261
Alignment:
Q  30 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatgt 129  Q
    ||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||  || | |  ||  | |||||||||||||    
T  14304121 aattgatcatgaaacttatcacaattcgacaacaacaaagcataattcaccaattgagcatattttcaacacgtaaccatatcatacactttgaacatgt 14304220  T
Q  130 gattcaactaacaacaattcaattatccataacttcataca 170  Q
     ||||||||||| ||||||||||||||||||||||||||||    
T  14304221 aattcaactaaccacaattcaattatccataacttcataca 14304261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 185 - 351
Target Start/End: Complemental strand, 11060977 - 11060809
Alignment:
Q  185 ccaattaagcactt-ttcataccaataattgaaaa-ttgcaataagtgattatgatgaattctaacccccttaccttagatagagtaatc--cctagctt 280  Q
    |||||||||||||| ||||||| |||||||||||| ||||||| | |||||||||||||||| |||||||||||||||| |||| |||||  ||||||||    
T  11060977 ccaattaagcacttattcatac-aataattgaaaaattgcaatta-tgattatgatgaattccaacccccttaccttagttagattaatctccctagctt 11060880  T
Q  281 aggcttcaattttgctcctagctctcatccaatccttgattcttcaagttcctcttctctctaaccctttt 351  Q
    | |||||| ||||||||||||||||| |||| |||||||||||||||||||| ||||||||||||| ||||    
T  11060879 aagcttcagttttgctcctagctctcttccactccttgattcttcaagttccccttctctctaaccatttt 11060809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 168 - 306
Target Start/End: Original strand, 14298681 - 14298821
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattg-aaaattgcaataagtgattatgatgaattctaacccccttaccttagataga 266  Q
    |||||| ||||||||||||||||||||||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||| |||     
T  14298681 acaattaatcaattcacccaattaagcacttttcatacaaataattgaaaaattgcaataa-tgattatgatgaattctaacccccttaccttagttagg 14298779  T
Q  267 gtaa--tccctagcttaggcttcaattttgctcctagctctc 306  Q
     |||  || |||||||||||||||||||| ||||||||||||    
T  14298780 ttaatctctctagcttaggcttcaatttttctcctagctctc 14298821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 219 - 357
Target Start/End: Original strand, 40939437 - 40939578
Alignment:
Q  219 ttgcaataagtgattatgatgaattctaacccccttaccttagatagagtaatc--cctagcttaggcttcaattttgctcctagctctcatccaatcct 316  Q
    ||||||| | ||||||||||||||||||||||||||||||||| || | |||||  ||||||||||||||||||||||||||||||||||  ||||||||    
T  40939437 ttgcaatgaatgattatgatgaattctaacccccttaccttagttatattaatctccctagcttaggcttcaattttgctcctagctctctcccaatcct 40939536  T
Q  317 tgattcttcaagttc-ctcttctctctaacccttttctcctt 357  Q
    ||||||||||||||| | ||||||||||||||||||| ||||    
T  40939537 tgattcttcaagttctcccttctctctaacccttttcacctt 40939578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 30 - 170
Target Start/End: Original strand, 3578161 - 3578302
Alignment:
Q  30 aattgatcatgaaacttatcacaattcaataacaacaaagcataattca-ccaattgagcatattttcaacatataccaacttctcatactttgaacatg 128  Q
    |||||||||||||||||||| ||||||||  |||||| ||| ||||||| ||| ||||||||||||||||||||||| |  |||||||||||||||||||    
T  3578161 aattgatcatgaaacttatcgcaattcaaccacaacatagcgtaattcaaccagttgagcatattttcaacatatactattttctcatactttgaacatg 3578260  T
Q  129 tgattcaactaacaacaattcaattatccataacttcataca 170  Q
      |||||||||| |||||||||||||||||||||||||||||    
T  3578261 aaattcaactaataacaattcaattatccataacttcataca 3578302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 175 - 356
Target Start/End: Complemental strand, 22144252 - 22144071
Alignment:
Q  175 atcaattcacccaattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagatagagtaa--tc 272  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||||||||||||||||||||| |||  |||  ||    
T  22144252 atcaattcacccaattaagcacttttcatacaaataattgaaaattacaaaaagtgattatgatgaattctaacccccttaccttag-taggttaatctc 22144154  T
Q  273 cctagcttaggcttcaattttgctcctagctc-tcatccaatccttgattcttcaagttcctcttctctctaacccttttctcct 356  Q
     |||||||||||||||||||| || ||| ||| ||  |||| ||||||||||||||||| ||| ||||||| |||||||| ||||    
T  22144153 tctagcttaggcttcaatttttcttctatctcttctcccaacccttgattcttcaagtt-ctcctctctct-acccttttttcct 22144071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 30 - 170
Target Start/End: Complemental strand, 55441023 - 55440882
Alignment:
Q  30 aattgatcatgaaacttatcacaattcaataacaacaaagcataattca-ccaattgagcatattttcaacatataccaacttctcatactttgaacatg 128  Q
    |||||||||||||||||||||||||||||  |||||| || |||||||| ||| ||||||||||||||| |||||| ||  |||||||||||||||||||    
T  55441023 aattgatcatgaaacttatcacaattcaaccacaacatagtataattcaaccagttgagcatattttcatcatatatcattttctcatactttgaacatg 55440924  T
Q  129 tgattcaactaacaacaattcaattatccataacttcataca 170  Q
      |||| |||||||||||||||||||||||||||||||||||    
T  55440923 aaattccactaacaacaattcaattatccataacttcataca 55440882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 186 - 361
Target Start/End: Original strand, 17139785 - 17139963
Alignment:
Q  186 caattaagcactt-ttcataccaataattgaaaattgcaataag--tgattatgatgaattctaacccccttaccttagatagagtaat-ccctagctta 281  Q
    ||||||||||||| ||||||| || |||||||| || || ||||  ||||||||||||||||||||||||||||||||| |||| |||| |||||||  |    
T  17139785 caattaagcacttattcatac-aacaattgaaatttacactaagaatgattatgatgaattctaacccccttaccttagttagattaattccctagccca 17139883  T
Q  282 ggcttcaattttgctcctagctctcatccaatccttgattcttcaagttcctcttctctctaacccttttctcctttgct 361  Q
     ||||||||||  |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||  |||||||    
T  17139884 agcttcaatttacctcctagctctcttccaatccttgaatcttcaagttcctcttctctctaacccttttcctctttgct 17139963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 34 - 169
Target Start/End: Complemental strand, 34439513 - 34439378
Alignment:
Q  34 gatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatgtgatt 133  Q
    ||||||||||||||||| ||||||  |||||||| ||||||||||||||||||||||||||| |||| ||||| | ||  |||||||||||||||| |||    
T  34439513 gatcatgaaacttatcataattcatcaacaacaatgcataattcaccaattgagcatattttaaacacatacccattttacatactttgaacatgtaatt 34439414  T
Q  134 caactaacaacaattcaattatccataacttcatac 169  Q
    |||| |||||||||||| ||||||||||||||||||    
T  34439413 caaccaacaacaattcatttatccataacttcatac 34439378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 45 - 170
Target Start/End: Complemental strand, 11061165 - 11061039
Alignment:
Q  45 ttatcacaattcaataacaacaaagcataattca-ccaattgagcatattttcaacatataccaacttctcatactttgaacatgtgattcaactaacaa 143  Q
    |||||||||||||| ||||||| ||||||||||| |||||||||||||||||||||||||||||  |||||||||||||||| ||  |||||||||||||    
T  11061165 ttatcacaattcaacaacaacatagcataattcaaccaattgagcatattttcaacatataccattttctcatactttgaacctgaaattcaactaacaa 11061066  T
Q  144 caattcaattatccataacttcataca 170  Q
    |||| ||||||| ||||||||||||||    
T  11061065 caatccaattattcataacttcataca 11061039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 15 - 149
Target Start/End: Original strand, 17938633 - 17938766
Alignment:
Q  15 tcaacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctc 114  Q
    ||||||||||| || |||||||||||||| | | |||||| ||| ||||||||||||||||||| ||||| ||||||||||||||||||| |||||||||    
T  17938633 tcaacaacaac-atcaattgatcatgaaaataaccacaatccaacaacaacaaagcataattcatcaattaagcatattttcaacatatatcaacttctc 17938731  T
Q  115 atactttgaacatgtgattcaactaacaacaattc 149  Q
    ||||||||||||||  |||||||||||||||||||    
T  17938732 atactttgaacatgcaattcaactaacaacaattc 17938766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 30 - 170
Target Start/End: Complemental strand, 22144446 - 22144306
Alignment:
Q  30 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcat--actttgaacat 127  Q
    ||||||||||||||||||||||||||||  |||||||| ||||| |||||||||||||||||||||||||| ||||| | || ||||  |||||||||||    
T  22144446 aattgatcatgaaacttatcacaattcatcaacaacaatgcatacttcaccaattgagcatattttcaacacataccca-ttttcatacactttgaacat 22144348  T
Q  128 gtgattcaactaacaacaattcaattatccataacttcataca 170  Q
    || ||||||||||| ||||||||||||| ||||||||||||||    
T  22144347 gtaattcaactaac-acaattcaattattcataacttcataca 22144306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 229 - 356
Target Start/End: Original strand, 30207539 - 30207668
Alignment:
Q  229 tgattatgatgaattctaacccccttaccttagatagagtaatc--cctagcttaggcttcaattttgctcctagctc-tcatccaatccttgattcttc 325  Q
    ||||||||||||||| ||||||||||||||||| |||| |||||  |||||||||||||||||||||||||||||||| ||  |||| ||||||||||||    
T  30207539 tgattatgatgaattataacccccttaccttagttagattaatctccctagcttaggcttcaattttgctcctagctcttctcccaacccttgattcttc 30207638  T
Q  326 aagttcctcttctctctaacccttttctcct 356  Q
    ||| |||||||||||||||||||||||||||    
T  30207639 aag-tcctcttctctctaacccttttctcct 30207668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 230 - 350
Target Start/End: Complemental strand, 12487701 - 12487580
Alignment:
Q  230 gattatgatgaattctaacccccttaccttagatagagtaat-ccctagcttaggcttcaattttgctcctagctctcatccaatccttgattcttcaag 328  Q
    |||||||||||||||||||||||||||||||| |||| |||| |||||||| | |||||| ||| |||| |||||||| |||||||||||| ||||||||    
T  12487701 gattatgatgaattctaacccccttaccttagttagattaattccctagctcaagcttcattttagctcttagctctcttccaatccttgaatcttcaag 12487602  T
Q  329 ttcctcttctctctaacccttt 350  Q
    ||||||||||||||||||||||    
T  12487601 ttcctcttctctctaacccttt 12487580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 30 - 170
Target Start/End: Complemental strand, 317682 - 317543
Alignment:
Q  30 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatgt 129  Q
    ||||||||||||||| ||||||||||||  |||||||| |||||||||||||||| ||||||||||| ||| ||||| | || |||||||||||||||      
T  317682 aattgatcatgaaacatatcacaattcatcaacaacaatgcataattcaccaatttagcatattttc-acacatacccatttttcatactttgaacatac 317584  T
Q  130 gattcaactaacaacaattcaattatccataacttcataca 170  Q
     |||||||||||||||||||||| || ||||||||||||||    
T  317583 aattcaactaacaacaattcaatcattcataacttcataca 317543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 30 - 170
Target Start/End: Complemental strand, 16996233 - 16996094
Alignment:
Q  30 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatgt 129  Q
    ||||||||||||||| ||||||||||||  |||||||| |||||||||||||||||||||||||||| ||| ||||| | || |||||||||||||||      
T  16996233 aattgatcatgaaacatatcacaattcatcaacaacaatgcataattcaccaattgagcatattttc-acacatacccatttttcatactttgaacatac 16996135  T
Q  130 gattcaactaacaacaattcaattatccataacttcataca 170  Q
     |||||| ||||||||||||||| || ||||||||||||||    
T  16996134 aattcaagtaacaacaattcaatcattcataacttcataca 16996094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 15 - 168
Target Start/End: Complemental strand, 53898643 - 53898491
Alignment:
Q  15 tcaacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctc 114  Q
    ||||||||||| || ||||||||||||||||||||||||| ||| |||||||| |||||||||||||||||||||||||||||||| ||||| | || ||    
T  53898643 tcaacaacaac-attaattgatcatgaaacttatcacaatgcaacaacaacaatgcataattcaccaattgagcatattttcaacacataccca-ttttc 53898546  T
Q  115 at--actttgaacatgtgattcaactaacaacaattcaattatccataacttcata 168  Q
    ||  ||||||||||| | || |||||||| ||||||||||||| ||||||||||||    
T  53898545 atacactttgaacatttaatgcaactaac-acaattcaattattcataacttcata 53898491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 30 - 170
Target Start/End: Complemental strand, 19570862 - 19570723
Alignment:
Q  30 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatatac-caacttctcatactttgaacatg 128  Q
    ||||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||||| |||| |||||||| ||  |||  | ||||||||||||    
T  19570862 aattgatcatgaaacttatcacaattcaccaacaacaatgcataattcaccaattgagcata-tttccacatatactcattttcatacactttgaacatg 19570764  T
Q  129 tgattcaactaacaacaattcaattatccataacttcataca 170  Q
    | ||||||||||| ||||||||||||| ||||||||||||||    
T  19570763 taattcaactaac-acaattcaattattcataacttcataca 19570723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 16 - 155
Target Start/End: Complemental strand, 11329148 - 11329010
Alignment:
Q  16 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaatt-gagcatattttcaacatataccaacttctc 114  Q
    |||||||||| || ||||||||||||| ||||||||||||||| ||||||| ||||||||||| ||||| |||||||||| ||||||||||||  |||||    
T  11329148 caacaacaac-atcaattgatcatgaatcttatcacaattcaacaacaacatagcataattcaacaatttgagcatattt-caacatataccactttctc 11329051  T
Q  115 atactttgaacatgtgattcaactaacaacaattcaattat 155  Q
    ||||||||||||||  |||  ||||||||||||||||||||    
T  11329050 atactttgaacatgaaatttcactaacaacaattcaattat 11329010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 30 - 170
Target Start/End: Complemental strand, 6146920 - 6146780
Alignment:
Q  30 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcat--actttgaacat 127  Q
    |||||| |||||||||||||||||||||  |||||||| |||| ||||||||||||||||||||||||||| ||||| | || ||||  |||||||||||    
T  6146920 aattgaccatgaaacttatcacaattcatcaacaacaatgcatgattcaccaattgagcatattttcaacacataccca-ttttcatacactttgaacat 6146822  T
Q  128 gtgattcaactaacaacaattcaattatccataacttcataca 170  Q
    || ||||||||||  ||||||||||||| ||||||||||||||    
T  6146821 gtaattcaactaa-tacaattcaattattcataacttcataca 6146780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 30 - 170
Target Start/End: Complemental strand, 6154505 - 6154365
Alignment:
Q  30 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcat--actttgaacat 127  Q
    ||||||||||||||||||||||||||||  || ||||| |||||||||||||||||||||||||||||||| ||||| | || ||||  |||||||||||    
T  6154505 aattgatcatgaaacttatcacaattcatcaataacaatgcataattcaccaattgagcatattttcaacacataccca-ttttcataaactttgaacat 6154407  T
Q  128 gtgattcaactaacaacaattcaattatccataacttcataca 170  Q
    || ||||||||||| ||||||||| ||| ||||| ||||||||    
T  6154406 gtaattcaactaac-acaattcaactattcataatttcataca 6154365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 30 - 170
Target Start/End: Original strand, 13817585 - 13817724
Alignment:
Q  30 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcat--actttgaacat 127  Q
    ||||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||||| |||| ||||||||| | || ||||  |||||||||||    
T  13817585 aattgatcatgaaacttatcacaattcaccaacaacaatgcataattcaccaattgagcata-tttccacatataccca-ttttcatacactttgaacat 13817682  T
Q  128 gtgattcaactaacaacaattcaattatccataacttcataca 170  Q
    || ||||||||||| | ||||||||||| ||||||||||||||    
T  13817683 gtaattcaactaac-ataattcaattattcataacttcataca 13817724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 30 - 165
Target Start/End: Original strand, 16880196 - 16880331
Alignment:
Q  30 aattgatcatgaaacttatcacaattcaataacaacaaagcataatt-caccaattgagcatattttcaacatataccaacttctcatactttgaacatg 128  Q
    |||||| |||||| ||||||||||||||| ||||||| ||||||||| ||| ||||||||||||| | |||||||||||  |||||||||||||||||||    
T  16880196 aattgaacatgaatcttatcacaattcaacaacaacatagcataatttcacaaattgagcatattct-aacatataccactttctcatactttgaacatg 16880294  T
Q  129 tgattcaactaacaacaattcaattatccataacttc 165  Q
      |||  ||||||||||||||||||||| | ||||||    
T  16880295 aaattttactaacaacaattcaattatcaacaacttc 16880331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 16 - 167
Target Start/End: Original strand, 17139568 - 17139718
Alignment:
Q  16 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattc-accaattgagcatattttcaacatataccaacttctc 114  Q
    |||||||||| || ||||||||||||| ||||||||||||||| ||||||| ||||| |||| |||||||||||||| |||||||||||||||  |||||    
T  17139568 caacaacaac-atcaattgatcatgaatcttatcacaattcaacaacaacatagcatgattcaaccaattgagcata-tttcaacatataccattttctc 17139665  T
Q  115 atactttgaacatgtgattcaactaacaacaattcaattatccataacttcat 167  Q
    ||| ||||||||||  |||  || |||||||||||||||| | | ||||||||    
T  17139666 atagtttgaacatgaaatttcaccaacaacaattcaattaccaacaacttcat 17139718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 16 - 167
Target Start/End: Complemental strand, 12488913 - 12488763
Alignment:
Q  16 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaa-ttgagcatattttcaacatataccaacttctc 114  Q
    |||||||||| || ||||||||||||| ||||||||||||||| ||||||| | ||||||||| ||| |||||||||  ||||||||||| ||  |||||    
T  12488913 caacaacaac-atcaattgatcatgaatcttatcacaattcaacaacaacataacataattcatcaatttgagcata-attcaacatatatcactttctc 12488816  T
Q  115 atactttgaacatgtgattcaactaacaacaattcaattatccataacttcat 167  Q
    ||||||||||||||  |||  |  |||||||||||||||||| | ||||||||    
T  12488815 atactttgaacatgaaatttcatcaacaacaattcaattatcaacaacttcat 12488763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 31 - 166
Target Start/End: Complemental strand, 12560409 - 12560274
Alignment:
Q  31 attgatcatgaaacttatcacaattcaataacaacaaagcataattc-accaattgagcatattttcaacatataccaacttctcatactttgaacatgt 129  Q
    |||||||||||| | ||||||||||||| ||||||| |||||||||| |||| ||| |||||||||| ||||||||||  |||||||||||||||||||     
T  12560409 attgatcatgaatcatatcacaattcaacaacaacatagcataattcaaccagttgggcatattttc-acatataccactttctcatactttgaacatga 12560311  T
Q  130 gattcaactaacaacaattcaattatccataacttca 166  Q
     |||   ||||||| ||||||| |||| |||||||||    
T  12560310 aatttctctaacaaaaattcaagtatcaataacttca 12560274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 30 - 170
Target Start/End: Complemental strand, 16182119 - 16181980
Alignment:
Q  30 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcat--actttgaacat 127  Q
    |||||||||| |||||||||||||||||  ||| |||| ||||||||||||||||  |||||||||| ||| ||||| | || ||||  |||||||||||    
T  16182119 aattgatcattaaacttatcacaattcatcaacgacaatgcataattcaccaatttggcatattttc-acacataccca-ttttcatacactttgaacat 16182022  T
Q  128 gtgattcaactaacaacaattcaattatccataacttcataca 170  Q
    || ||| ||||||| ||||||||||||| ||||||||||||||    
T  16182021 gtaatttaactaac-acaattcaattattcataacttcataca 16181980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 30 - 156
Target Start/End: Original strand, 39656599 - 39656725
Alignment:
Q  30 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaatt-gagcatattttcaacatataccaacttctcatactttgaacatg 128  Q
    |||||| |||||| ||||  ||||||||| ||||||| ||||||||||| ||||| |||||||||| ||||||||| ||  |||||||||||||||||||    
T  39656599 aattgaacatgaatcttacaacaattcaacaacaacatagcataattcaacaatttgagcatattt-caacatatatcactttctcatactttgaacatg 39656697  T
Q  129 tgattcaactaacaacaattcaattatc 156  Q
      |||  |||||||||||||||||||||    
T  39656698 aaatttcactaacaacaattcaattatc 39656725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 186 - 351
Target Start/End: Original strand, 48421855 - 48422022
Alignment:
Q  186 caattaagcactt-ttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagatagagtaat-ccctagcttagg 283  Q
    ||||||||||||| ||||||| |  |||  |||||| || ||| |||||||||||||||||||| | |||||||||| ||||  ||| ||||||||   |    
T  48421855 caattaagcacttattcatacaacaaatgaaaaattacactaaatgattatgatgaattctaactctcttaccttagttagatcaattccctagctctag 48421954  T
Q  284 cttcaattttgctcctagctctcatccaatccttgattcttcaagttcctcttctctctaaccctttt 351  Q
    ||||| |||  |||||||| ||| |||||||||||| |||||||| |||| |||||||||||||||||    
T  48421955 cttcactttaactcctagccctcttccaatccttgaatcttcaagctccttttctctctaaccctttt 48422022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 229 - 361
Target Start/End: Original strand, 16880446 - 16880579
Alignment:
Q  229 tgattatgatgaattctaacccccttaccttagatagagtaa-tccctagcttaggcttcaattttgctcctagctctcatccaatccttgattcttcaa 327  Q
    ||||||||||||||||||||||||||||||||| ||||  || ||||||||| | |||||| ||| ||| |||| ||   |||||  ||||| |||||||    
T  16880446 tgattatgatgaattctaacccccttaccttagttagatcaattccctagctcaagcttcactttagcttctaggtcctctccaactcttgaatcttcaa 16880545  T
Q  328 gttcctcttctctctaacccttttctcctttgct 361  Q
    | |||||||||||||||||||||||  |||||||    
T  16880546 gctcctcttctctctaacccttttcctctttgct 16880579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 229 - 351
Target Start/End: Original strand, 13839201 - 13839321
Alignment:
Q  229 tgattatgatgaattctaacccccttaccttagat--agagtaatccctagcttaggcttcaattttgctcct-agctctcatccaatccttgattcttc 325  Q
    |||||||||||||  ||||||||||||||||||||  ||||||||||||| ||||||||||||||| |||||| ||||| | |||||||||  |||||||    
T  13839201 tgattatgatgaagactaacccccttaccttagatgaagagtaatcccta-cttaggcttcaatttagctcctaagctcac-tccaatcctcaattcttc 13839298  T
Q  326 aagttcctcttctctctaaccctttt 351  Q
    ||||   |||||||||||||||||||    
T  13839299 aagt---tcttctctctaaccctttt 13839321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 30 - 167
Target Start/End: Complemental strand, 14059387 - 14059250
Alignment:
Q  30 aattgatcatgaaacttatcacaattcaataacaacaaagcataattca-ccaattgagcatattttcaacatataccaacttctcatactttgaacatg 128  Q
    |||||| ||||||  |||||||||||||| ||||||| ||||||||||| | ||||||||||| |||||||||||  ||  |||||||||||||||||||    
T  14059387 aattgaacatgaatattatcacaattcaacaacaacatagcataattcatcaaattgagcata-tttcaacatatgtcattttctcatactttgaacatg 14059289  T
Q  129 tgattcaactaacaacaattcaattatccataacttcat 167  Q
      |||   |||| ||||||||||||||| | ||||||||    
T  14059288 aaatttctctaaaaacaattcaattatcaacaacttcat 14059250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 229 - 351
Target Start/End: Complemental strand, 11882144 - 11882021
Alignment:
Q  229 tgattatgatgaattctaacccccttaccttagatagagtaa-tccctagcttaggcttcaattttgctccta-gctctcatccaatccttgattcttca 326  Q
    ||||||||||||||||||||||||||||||||| ||||  || ||||||| | | |||||| ||| ||||||| | |||| |||||  ||||| ||||||    
T  11882144 tgattatgatgaattctaacccccttaccttagttagatcaattccctaggtcaagcttcactttagctcctaggatctc-tccaactcttgaatcttca 11882046  T
Q  327 agttcctcttctctctaaccctttt 351  Q
    || ||||||||||||||||||||||    
T  11882045 agctcctcttctctctaaccctttt 11882021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 294 - 361
Target Start/End: Original strand, 14080881 - 14080948
Alignment:
Q  294 gctcctagctctcatccaatccttgattcttcaagttcctcttctctctaacccttttctcctttgct 361  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||| ||||||||||  |||||||    
T  14080881 gctcctagctctcttccaatccttgaatcttcaagttcctcttctctccaacccttttcctctttgct 14080948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 60 - 170
Target Start/End: Complemental strand, 11196456 - 11196353
Alignment:
Q  60 aacaacaaagcataattca-ccaattgagcatattttcaacatataccaacttctcatactttgaacatgtgattcaactaacaacaattcaattatcca 158  Q
    ||||||||| ||||||||| |||||| ||||||||||||||||||||||  ||||||        ||||   ||||||||||||||||||||||||||||    
T  11196456 aacaacaaatcataattcaaccaattaagcatattttcaacatataccattttctca--------acataaaattcaactaacaacaattcaattatcca 11196365  T
Q  159 taacttcataca 170  Q
    ||||||||||||    
T  11196364 taacttcataca 11196353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 30 - 100
Target Start/End: Complemental strand, 12349904 - 12349834
Alignment:
Q  30 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaaca 100  Q
    ||||||||||||||||||||||||||||  ||| || | ||||||||||||||||||||||||| ||||||    
T  12349904 aattgatcatgaaacttatcacaattcatcaactacgatgcataattcaccaattgagcatattatcaaca 12349834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 186 - 301
Target Start/End: Complemental strand, 14059183 - 14059067
Alignment:
Q  186 caattaagcactt-ttcataccaataattgaaaattgcaataag-tgattatgatgaattctaacccccttaccttagatagagtaa-tccctagcttag 282  Q
    ||||||||||||| ||||||| ||||||||||||||||| |||  ||||||||||||||| ||||||||||| ||||| |||| ||| ||||||||||||    
T  14059183 caattaagcacttattcatac-aataattgaaaattgcactaaaatgattatgatgaattataaccccctta-cttagttagattaattccctagcttag 14059086  T
Q  283 gcttcaattttgctcctag 301  Q
     ||||| ||| ||||||||    
T  14059085 acttcactttagctcctag 14059067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 14528199 - 14528118
Alignment:
Q  16 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattc-accaattgagcatattttca 97  Q
    |||||||||| || ||||||||||||| ||||||||||||||| ||||||| ||||| |||| ||||||||||||||||||||    
T  14528199 caacaacaac-atcaattgatcatgaatcttatcacaattcaacaacaacatagcatgattcaaccaattgagcatattttca 14528118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 3992624 - 3992684
Alignment:
Q  31 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 91  Q
    |||||||||||||||||||||||||||  |||||| | |||||||||||||||||||||||    
T  3992624 attgatcatgaaacttatcacaattcatcaacaaccatgcataattcaccaattgagcata 3992684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 168 - 353
Target Start/End: Complemental strand, 11328953 - 11328765
Alignment:
Q  168 acaatttatcaattcacccaattaagcactt-ttcataccaataattgaaaattg---caataagtgattatgatgaattctaacccccttaccttagat 263  Q
    |||||| ||||||| || ||||||||||||| ||||||| ||||||||||||||    | | || ||||||||||||||||||||||||||||||||| |    
T  11328953 acaattaatcaatt-actcaattaagcacttattcatac-aataattgaaaatttacactaaaaatgattatgatgaattctaacccccttaccttagtt 11328856  T
Q  264 agagtaa-tccctagcttaggcttcaattttgctcctagctctcatccaatccttgattcttcaagttcctcttctctctaacccttttct 353  Q
    |||  || | ||||| | | |||||| ||| |||||||| ||   |||||  ||||| |||||||| ||||||||||||||| || |||||    
T  11328855 agatcaatttcctagatcaagcttcactttagctcctaggtcctctccaactcttgaatcttcaagctcctcttctctctaatccctttct 11328765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 38167988 - 38168048
Alignment:
Q  31 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 91  Q
    |||||||||||||||||| ||||||||  ||||||| ||||||||||||||||||||||||    
T  38167988 attgatcatgaaacttattacaattcatcaacaacatagcataattcaccaattgagcata 38168048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 186 - 351
Target Start/End: Original strand, 39656803 - 39656970
Alignment:
Q  186 caattaagcactt-ttcataccaataattgaaaa-ttgcaataagtgattatgatgaattctaacccccttaccttagatagagtaa-tccctagcttag 282  Q
    ||||||||||||| ||||||| || ||||||||| ||||| ||| |||||||||| ||||||||| |||||||||||| ||||  || ||||||||| |     
T  39656803 caattaagcacttattcatac-aacaattgaaaaattgcactaaatgattatgatcaattctaactcccttaccttagttagatcaattccctagctcaa 39656901  T
Q  283 gcttcaattttgctcctagctctcatccaatccttgattcttcaagttcctcttctctctaaccctttt 351  Q
    |||||| |||  ||||||| |   |||   | ||||| |||||||| ||||||||||||||||||||||    
T  39656902 gcttcattttaactcctaggttctatcatcttcttgaatcttcaagctcctcttctctctaaccctttt 39656970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 2844265 - 2844325
Alignment:
Q  31 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 91  Q
    |||||||||||||||||||||||||||  || ||| | |||||||||||||||||||||||    
T  2844265 attgatcatgaaacttatcacaattcatcaagaaccatgcataattcaccaattgagcata 2844325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 44 - 167
Target Start/End: Complemental strand, 3576598 - 3576475
Alignment:
Q  44 cttatcacaattcaataacaacaaagcataattcaccaatt-gagcatattttcaacatataccaacttctcatactttgaacatgtgattcaactaaca 142  Q
    ||||||||||||||| ||||||| |||||||| || ||||| ||||||| || ||| ||||| ||  ||||||||| |||||||||  |||  || ||||    
T  3576598 cttatcacaattcaacaacaacatagcataatccatcaatttgagcataatt-caatatatatcactttctcatacattgaacatgaaatttcaccaaca 3576500  T
Q  143 acaattcaattatccataacttcat 167  Q
    |||||||||||||| | ||||||||    
T  3576499 acaattcaattatcaacaacttcat 3576475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 16261527 - 16261587
Alignment:
Q  31 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 91  Q
    |||||||||||||| ||||||||||||  |||||| | |||||||||||||||||||||||    
T  16261527 attgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 16261587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 30153016 - 30153076
Alignment:
Q  31 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 91  Q
    |||||||||||||| ||||||||||||  |||||| | |||||||||||||||||||||||    
T  30153016 attgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 30153076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 69 - 170
Target Start/End: Original strand, 38527841 - 38527941
Alignment:
Q  69 gcataattcaccaattgagcatattttcaacatataccaacttctcatac--tttgaacatgtgattcaactaacaacaattcaattatccataacttca 166  Q
    ||||||||||||||||||||||||||||  || ||||| | || ||||||  ||||||||||| ||||||||||| | ||||||||||| ||||||||||    
T  38527841 gcataattcaccaattgagcatattttcc-cacatacccattt-tcatacactttgaacatgtaattcaactaac-ataattcaattattcataacttca 38527937  T
Q  167 taca 170  Q
    ||||    
T  38527938 taca 38527941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 53771115 - 53771175
Alignment:
Q  31 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 91  Q
    |||||||||||||| ||||||||||||  |||||| | |||||||||||||||||||||||    
T  53771115 attgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 53771175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 54685482 - 54685422
Alignment:
Q  31 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 91  Q
    |||||||||||||| ||||||||||||  |||||| | |||||||||||||||||||||||    
T  54685482 attgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 54685422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 274 - 356
Target Start/End: Original strand, 13835989 - 13836070
Alignment:
Q  274 ctagcttaggcttcaattttgctcctagctc-tcatccaatccttgattcttcaagttcctcttctctctaacccttttctcct 356  Q
    ||||||||||||||||||||||||||||||| ||  |||| ||||||||||||||| |||| |||||||| ||| |||||||||    
T  13835989 ctagcttaggcttcaattttgctcctagctcttctcccaacccttgattcttcaag-tcctattctctct-accattttctcct 13836070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 167
Target Start/End: Original strand, 30207289 - 30207426
Alignment:
Q  30 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaa-ttgagcatattttcaacatataccaacttctcatactttgaacatg 128  Q
    |||||| | |||| |||||||||||| || ||||||| |||| |||||| ||| || ||||||  ||||||||||| ||  |||||||||||||||||||    
T  30207289 aattgaacttgaatcttatcacaattgaacaacaacatagcacaattcatcaatttaagcata-attcaacatatatcactttctcatactttgaacatg 30207387  T
Q  129 tgattcaactaacaacaattcaattatccataacttcat 167  Q
       ||  || |||||||||||||||||| | ||||||||    
T  30207388 aagtttcaccaacaacaattcaattatcaacaacttcat 30207426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 229 - 349
Target Start/End: Complemental strand, 38810940 - 38810818
Alignment:
Q  229 tgattatgatgaattctaacccccttaccttagata-gagtaatccctagcttaggcttcaattttgctccta-gctctcatccaatccttgattcttca 326  Q
    ||||||||||||||||||||||||||||||||| ||  |  ||| ||||||  | |||||| ||| ||||||| | |||| |||| | ||||| ||||||    
T  38810940 tgattatgatgaattctaacccccttaccttagttatcaccaattcctagcccaagcttcactttagctcctaggatctcttccagttcttgaatcttca 38810841  T
Q  327 agttcctcttctctctaaccctt 349  Q
    || ||||||||| ||||||||||    
T  38810840 agctcctcttctatctaaccctt 38810818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 229 - 342
Target Start/End: Original strand, 28558495 - 28558610
Alignment:
Q  229 tgattatgatgaattctaacccccttaccttagatagag--taatccctagcttaggcttcaattttgctcctagctctcatccaatccttg-attcttc 325  Q
    |||||||||| ||  ||||||| ||||||||||||| ||  ||||||| | |||||||||||||||||||||||    || || || ||||| |||||||    
T  28558495 tgattatgataaaaactaaccctcttaccttagataaagattaatcccaa-cttaggcttcaattttgctcctatgattcttcaaacccttgaattcttc 28558593  T
Q  326 aagttcctcttctctct 342  Q
    |||||||||||||||||    
T  28558594 aagttcctcttctctct 28558610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 229 - 349
Target Start/End: Original strand, 38168238 - 38168362
Alignment:
Q  229 tgattatgatgaattctaacccccttaccttagat--agagtaatccctagcttaggcttcaattttgctcctagctctca-tccaatccttgattcttc 325  Q
    |||||||||| ||  ||||||||||||||||||||  ||| ||||||| | ||||||||||||||| |||||||  | ||| |||||||||| |||||||    
T  38168238 tgattatgataaagactaacccccttaccttagatgaagattaatcccaa-cttaggcttcaatttagctcctaagt-tcactccaatccttaattcttc 38168335  T
Q  326 aagttc---ctcttctctctaaccctt 349  Q
    ||| ||   ||||||||||||||||||    
T  38168336 aagctctccctcttctctctaaccctt 38168362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 33341955 - 33342015
Alignment:
Q  31 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 91  Q
    |||||||||||||| ||||| ||||||  |||||| | |||||||||||||||||||||||    
T  33341955 attgatcatgaaacatatcataattcatcaacaaccatgcataattcaccaattgagcata 33342015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 349
Target Start/End: Original strand, 33342205 - 33342323
Alignment:
Q  229 tgattatgatgaattctaacccccttaccttagat--agagtaatccctagcttaggcttcaattttgctcctagctctca-tccaatccttgattcttc 325  Q
    |||||||||| ||  ||||||| ||||||||||||  ||| ||||||| | ||||||||||||||| |||||||  | ||| |||||||||| |||||||    
T  33342205 tgattatgataaagactaaccctcttaccttagatgaagattaatcccaa-cttaggcttcaatttagctcctaagt-tcactccaatccttaattcttc 33342302  T
Q  326 aagttcctcttctctctaaccctt 349  Q
    ||||   |||||||||||||||||    
T  33342303 aagt---tcttctctctaaccctt 33342323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 229 - 349
Target Start/End: Original strand, 2050116 - 2050239
Alignment:
Q  229 tgattatgatgaattctaacccccttaccttagat--agagtaatccctagcttaggcttcaattttgctcct-agctctcatccaatccttgattcttc 325  Q
    |||||||||| ||  ||||||||||||||||||||  ||| ||||||| | ||||||||||||||| |||||| | ||| | |||||| |||||||||||    
T  2050116 tgattatgataaagactaacccccttaccttagataaagattaatccc-aacttaggcttcaatttagctcctaaactcac-tccaat-cttgattcttc 2050212  T
Q  326 aag---ttcctcttctctctaaccctt 349  Q
    |||   | |||||||||||||||||||    
T  2050213 aagctctccctcttctctctaaccctt 2050239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 245 - 349
Target Start/End: Complemental strand, 12030088 - 12029980
Alignment:
Q  245 taacccccttaccttagat--agagtaatccctagcttaggcttcaattttgctcct-agctctcatccaatccttgattcttcaag---ttcctcttct 338  Q
    |||||||||||||||||||  ||| ||||||| | ||||||||||||||| |||||| ||||| | ||||||||||  |||||||||   | ||||||||    
T  12030088 taacccccttaccttagataaagattaatccc-aacttaggcttcaatttagctcctaagctcac-tccaatccttagttcttcaagctctccctcttct 12029991  T
Q  339 ctctaaccctt 349  Q
    |||||||||||    
T  12029990 ctctaaccctt 12029980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 44 - 156
Target Start/End: Original strand, 17191628 - 17191740
Alignment:
Q  44 cttatcacaattcaataacaacaaagcataattcaccaatt-gagcatattttcaacatataccaacttctcatactttgaacatgtgattcaactaaca 142  Q
    ||||||||||||||  ||||||| | ||||||||| ||||| ||||||| || ||||||| | ||  |||||||||||||||||||  |||  || ||||    
T  17191628 cttatcacaattcagcaacaacataacataattcatcaatttgagcataatt-caacataaatcactttctcatactttgaacatgaaatttcaccaaca 17191726  T
Q  143 acaattcaattatc 156  Q
    ||||||| ||||||    
T  17191727 acaattcgattatc 17191740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 229 - 266
Target Start/End: Complemental strand, 17960237 - 17960200
Alignment:
Q  229 tgattatgatgaattctaacccccttaccttagataga 266  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  17960237 tgattatgatgaattctaacccccttaccttagttaga 17960200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 94 - 167
Target Start/End: Complemental strand, 47784876 - 47784803
Alignment:
Q  94 ttcaacatataccaacttctcatactttgaacatgtgattcaactaacaacaattcaattatccataacttcat 167  Q
    ||||||||||| ||  |||||||||||||||||||  |||  || |||||||||||||||||| | ||||||||    
T  47784876 ttcaacatatatcactttctcatactttgaacatgaaatttcaccaacaacaattcaattatcaacaacttcat 47784803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #99
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 7854056 - 7854116
Alignment:
Q  31 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 91  Q
    |||||||||||||| ||||||||||||  |||||  | |||||||||||||||||| ||||    
T  7854056 attgatcatgaaacatatcacaattcatcaacaatcatgcataattcaccaattgaacata 7854116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #100
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 261
Target Start/End: Original strand, 14080832 - 14080864
Alignment:
Q  229 tgattatgatgaattctaacccccttaccttag 261  Q
    |||||||||||||||||||||||||||||||||    
T  14080832 tgattatgatgaattctaacccccttaccttag 14080864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #101
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 87
Target Start/End: Complemental strand, 17956165 - 17956109
Alignment:
Q  31 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgag 87  Q
    |||||||||||||| ||||||||||||  |||||| | ||||||| |||||||||||    
T  17956165 attgatcatgaaacatatcacaattcatcaacaaccatgcataatacaccaattgag 17956109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #102
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 23492447 - 23492507
Alignment:
Q  31 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 91  Q
    |||||||||||||| ||||||||||||  |||||| |  |||||||||||| |||||||||    
T  23492447 attgatcatgaaacatatcacaattcatcaacaaccatccataattcaccatttgagcata 23492507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #103
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 91
Target Start/End: Original strand, 45581709 - 45581765
Alignment:
Q  35 atcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 91  Q
    |||||||||| ||||||||||||  |||||  | |||||||||||||||||||||||    
T  45581709 atcatgaaacatatcacaattcatcaacaatcatgcataattcaccaattgagcata 45581765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #104
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 261
Target Start/End: Complemental strand, 47784686 - 47784654
Alignment:
Q  229 tgattatgatgaattctaacccccttaccttag 261  Q
    |||||||||||||||||||||||||||||||||    
T  47784686 tgattatgatgaattctaacccccttaccttag 47784654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #105
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 229 - 260
Target Start/End: Complemental strand, 13301395 - 13301364
Alignment:
Q  229 tgattatgatgaattctaacccccttacctta 260  Q
    ||||||||||||||||||||||||||||||||    
T  13301395 tgattatgatgaattctaacccccttacctta 13301364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #106
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 229 - 260
Target Start/End: Complemental strand, 13312051 - 13312020
Alignment:
Q  229 tgattatgatgaattctaacccccttacctta 260  Q
    ||||||||||||||||||||||||||||||||    
T  13312051 tgattatgatgaattctaacccccttacctta 13312020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #107
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 225 - 260
Target Start/End: Original strand, 15550918 - 15550953
Alignment:
Q  225 taagtgattatgatgaattctaacccccttacctta 260  Q
    ||||||||||||||||||||||||||||||| ||||    
T  15550918 taagtgattatgatgaattctaacccccttatctta 15550953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #108
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 319 - 349
Target Start/End: Original strand, 2844607 - 2844637
Alignment:
Q  319 attcttcaagttcctcttctctctaaccctt 349  Q
    |||||||||||||||||||||||||||||||    
T  2844607 attcttcaagttcctcttctctctaaccctt 2844637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #109
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 319 - 349
Target Start/End: Original strand, 7854398 - 7854428
Alignment:
Q  319 attcttcaagttcctcttctctctaaccctt 349  Q
    |||||||||||||||||||||||||||||||    
T  7854398 attcttcaagttcctcttctctctaaccctt 7854428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #110
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 261
Target Start/End: Complemental strand, 9590693 - 9590647
Alignment:
Q  215 aaaattgcaataagtgattatgatgaattctaacccccttaccttag 261  Q
    |||||| || ||| ||||||||||||||||||| |||||||||||||    
T  9590693 aaaattacactaaatgattatgatgaattctaatccccttaccttag 9590647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #111
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 319 - 349
Target Start/End: Complemental strand, 15857102 - 15857072
Alignment:
Q  319 attcttcaagttcctcttctctctaaccctt 349  Q
    |||||||||||||||||||||||||||||||    
T  15857102 attcttcaagttcctcttctctctaaccctt 15857072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #112
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 349
Target Start/End: Complemental strand, 17912429 - 17912306
Alignment:
Q  229 tgattatgatgaattctaacccccttaccttagat--agagtaatccctagcttaggcttcaattttgctcct-agctctcatccaatccttgattcttc 325  Q
    |||||||||| ||  ||||||||||||||||||||  ||| ||||||| | || |||||||||||| |||||| ||||| | ||||| ||||||||||||    
T  17912429 tgattatgataaagactaacccccttaccttagataaagattaatccc-acctcaggcttcaatttagctcctaagctcac-tccaa-ccttgattcttc 17912333  T
Q  326 aag---ttcctcttctctctaaccctt 349  Q
    |||   | |||||||||| ||||||||    
T  17912332 aagctctccctcttctctttaaccctt 17912306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #113
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 349
Target Start/End: Complemental strand, 19260780 - 19260657
Alignment:
Q  229 tgattatgatgaattctaacccccttaccttagat--agagtaatccctagcttaggcttcaattttgctcctagctctca-tccaatccttgattcttc 325  Q
    |||||||||| ||  ||||||||||||||||||||  ||| ||||||| | ||||| ||||||||| |||| ||  ||||| |||||| |||||||||||    
T  19260780 tgattatgataaagactaacccccttaccttagataaagattaatccc-aacttagacttcaatttagctctta-atctcactccaat-cttgattcttc 19260684  T
Q  326 aag---ttcctcttctctctaaccctt 349  Q
    |||   | |||||||||||||||||||    
T  19260683 aagctctccctcttctctctaaccctt 19260657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #114
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 264
Target Start/End: Complemental strand, 51961076 - 51961027
Alignment:
Q  215 aaaattgcaataagtgattatgatgaattctaacccccttaccttagata 264  Q
    |||||| || ||| |||||||||||||  |||||||||||||||||||||    
T  51961076 aaaattacactaaatgattatgatgaagactaacccccttaccttagata 51961027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #115
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 91
Target Start/End: Complemental strand, 54038301 - 54038245
Alignment:
Q  35 atcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 91  Q
    |||||||||| ||||||| ||||  |||||| | |||||||||||||||| ||||||    
T  54038301 atcatgaaacatatcacatttcatcaacaaccatgcataattcaccaatttagcata 54038245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 131; Significance: 7e-68; HSPs: 57)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 168 - 357
Target Start/End: Original strand, 19405798 - 19405990
Alignment:
Q  168 acaatttatcaattcacccaattaagcactt-ttcataccaataattgaaaa-ttgcaataagtgattatgatgaattctaacccccttaccttagatag 265  Q
    |||||| |||||||||||||||||||||||| ||||||| |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| |||    
T  19405798 acaattaatcaattcacccaattaagcacttattcatac-aataattgaaaaattgcaataaatgattatgatgaattctaacccccttaccttagttag 19405896  T
Q  266 agtaatc--cctagcttaggcttcaattttgctcctagctctcatccaatccttgattcttcaagttcctcttctctctaacccttttctcctt 357  Q
    | |||||  |||||||||||||||||||| |||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  19405897 attaatctccctagcttaggcttcaatttagctcctagctctcccccaatccttgattcttcaagttcctcttctctctaacccttttctcctt 19405990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 168 - 350
Target Start/End: Complemental strand, 24183119 - 24182936
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaa-ttgcaataagtgattatgatgaattctaacccccttaccttagataga 266  Q
    |||||| ||||||||||||||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  24183119 acaattaatcaattcacccaattaagcacttttcatacaaataattgaaaaattgcaataa-tgattatgatgaattctaacccccttaccttagttaga 24183021  T
Q  267 gtaatc--cctagcttaggcttcaattttgctcctagctctcatccaatccttgattcttcaagttcctcttctctctaacccttt 350  Q
     |||||  ||||||||||||||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||||| ||||    
T  24183020 ttaatctccctagcttaggcttcaattttgctcctagctctctcccaatccttgattcttcaag-tcctcttctctctaactcttt 24182936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 168 - 350
Target Start/End: Complemental strand, 11337173 - 11336989
Alignment:
Q  168 acaatttatcaattcacccaattaagcactt-ttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagataga 266  Q
    |||||| | ||||||| |||||||||||||| ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  11337173 acaattaaccaattcatccaattaagcacttattcatac-aataattgaaaattgcaataaatgattatgatgaattctaacccccttaccttagttaga 11337075  T
Q  267 gtaatc--cctagcttaggcttcaattttgctcctagctctcatccaatccttgattcttcaagttcctcttctctctaacccttt 350  Q
     |||||  ||||||| | ||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||    
T  11337074 ttaatctccctagctcaagcttcaattttgctcctagctctcccccaatccttgattcttcaatttcctcttctctctaacccttt 11336989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 168 - 356
Target Start/End: Original strand, 20712335 - 20712526
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaattgc-aataagtgattatgatgaattctaacccccttaccttagataga 266  Q
    |||||| |||||||||| |||||||||||||||||||| | |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||     
T  20712335 acaattaatcaattcactcaattaagcacttttcatacaagtaattgaaaattgcaaataagtgattatgatgaattctaacccccttaccttagttagg 20712434  T
Q  267 gtaa--tccctagcttaggcttcaattttgctcctagctc-tcatccaatccttgattcttcaagttcctcttctctctaacccttttctcct 356  Q
     |||  || ||||||||||||||||||||||||||||||| ||  |||| ||||||||||||||||| |||||||||||||||||||||||||    
T  20712435 ttaatttctctagcttaggcttcaattttgctcctagctcttctcccaacccttgattcttcaagtt-ctcttctctctaacccttttctcct 20712526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 168 - 352
Target Start/End: Original strand, 23466696 - 23466881
Alignment:
Q  168 acaatttatcaattcacccaattaagcactt-ttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagataga 266  Q
    |||||| ||||||| || ||||||| ||||| ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  23466696 acaattaatcaatt-acacaattaatcacttattcatac-aataattgaaaattgcaataattgattatgatgaattctaacccccttaccttagttaga 23466793  T
Q  267 gtaatc--cctagcttaggcttcaattttgctcctagctctcatccaatccttgattcttcaagttcctcttctctctaacccttttc 352  Q
     |||||  |||||||||||||||||||||||||||||||||| |||| ||||||||||||||| |||| ||||||||||||| |||||    
T  23466794 ttaatctccctagcttaggcttcaattttgctcctagctctcttccactccttgattcttcaaattccccttctctctaaccattttc 23466881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 168 - 356
Target Start/End: Complemental strand, 1168191 - 1168004
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagatagag 267  Q
    |||||| ||||||||||| || |||||| ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||     
T  1168191 acaattaatcaattcaccaaaataagcatttttcatacaaataattgaaaattgcaataagtga-tatgatgaattctaacccccttaccttag-tagat 1168094  T
Q  268 taa--tccctagcttaggcttcaattttgctcctagctc-tcatccaatccttgattcttcaagttcctcttctctctaacccttttctcct 356  Q
    |||  |||||||||||||||||||||||||||||||||| ||  |||| ||||||||||||||| ||||||||||||| |||||||||||||    
T  1168093 taatctccctagcttaggcttcaattttgctcctagctcttctcccaacccttgattcttcaag-tcctcttctctct-acccttttctcct 1168004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 16 - 170
Target Start/End: Complemental strand, 1168391 - 1168238
Alignment:
Q  16 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctca 115  Q
    |||||||||| || ||||||||||||||||||||||||||||  |||||||  |||||||||||||||||||||||||||||||||||| ||  ||||||    
T  1168391 caacaacaac-atcaattgatcatgaaacttatcacaattcatcaacaacattgcataattcaccaattgagcatattttcaacatatatcattttctca 1168293  T
Q  116 tactttgaacatgtgattcaactaacaacaattcaattatccataacttcataca 170  Q
    |||||||||||||| |||||||||||||| |||| ||||||||||||||||||||    
T  1168292 tactttgaacatgtaattcaactaacaaccattctattatccataacttcataca 1168238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 16 - 170
Target Start/End: Complemental strand, 11337373 - 11337220
Alignment:
Q  16 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctca 115  Q
    |||||||||| || ||||||||||||||||||||||||||||  ||||||| | ||||||||||||| |||||||||||||||||| |||||  ||||||    
T  11337373 caacaacaac-atcaattgatcatgaaacttatcacaattcatcaacaacataacataattcaccaaatgagcatattttcaacatttaccatattctca 11337275  T
Q  116 tactttgaacatgtgattcaactaacaacaattcaattatccataacttcataca 170  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  11337274 tactttgaacatgtaattcaactaacaacaattcaattattcataacttcataca 11337220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 168 - 349
Target Start/End: Original strand, 4865522 - 4865702
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagatagag 267  Q
    |||||| ||||||||| |||||||||||||| |||||| |||||||||||||| ||| |||||||||||||||||||||||||||||||||||| |||      
T  4865522 acaattaatcaattcatccaattaagcacttatcatacaaataattgaaaattacaa-aagtgattatgatgaattctaacccccttaccttag-taggt 4865619  T
Q  268 taa--tccctagcttaggcttcaattttgctcctagctctcatccaatccttgattcttcaagttcctcttctctctaaccctt 349  Q
    |||  ||||||||||||||||||||||||||||||||||    | |||||||||||||||||| ||||||||||||||||||||    
T  4865620 taatctccctagcttaggcttcaattttgctcctagctcaacccaaatccttgattcttcaag-tcctcttctctctaaccctt 4865702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 15 - 170
Target Start/End: Complemental strand, 24183320 - 24183166
Alignment:
Q  15 tcaacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctc 114  Q
    ||||||||| |||| |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||   |||      
T  24183320 tcaacaaca-ccatcaattgatcatgaaactcatcacaattcaacaacaacaaagcataattcaccaattgagcatattttcaacatatacccttttcat 24183222  T
Q  115 atactttgaacatgtgattcaactaacaacaattcaattatccataacttcataca 170  Q
    | ||||||||||||| |||| |||||||||||||||||||||||| ||||||||||    
T  24183221 acactttgaacatgtaattcgactaacaacaattcaattatccatgacttcataca 24183166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 168 - 354
Target Start/End: Original strand, 28261776 - 28261960
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagatagag 267  Q
    |||||| ||||||||| |||||||||||||| |||||| |||||||||||||| ||| |||||||||||||||||||||||||||||||||||| |||      
T  28261776 acaattaatcaattcatccaattaagcacttatcatacaaataattgaaaattacaa-aagtgattatgatgaattctaacccccttaccttag-taggt 28261873  T
Q  268 taa--tccctagcttaggcttcaattttgctcctagctctc-atccaatccttgattcttcaagttcctcttctctctaacccttttctc 354  Q
    |||  ||| |||||||||||||||||||||||||||||||| |||  | ||||||||||||||| |||||||||||||||||||||||||    
T  28261874 taatctccttagcttaggcttcaattttgctcctagctctctatc--acccttgattcttcaag-tcctcttctctctaacccttttctc 28261960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 16 - 170
Target Start/End: Original strand, 20712136 - 20712289
Alignment:
Q  16 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctca 115  Q
    |||||||||| || ||||||||||| ||||||||||||||||  |||||||||||||||||||||||||||||||||| |||||| ||||| | || |||    
T  20712136 caacaacaac-atcaattgatcatgcaacttatcacaattcatcaacaacaaagcataattcaccaattgagcatattatcaacacatacccatttttca 20712234  T
Q  116 tactttgaacatgtgattcaactaacaacaattcaattatccataacttcataca 170  Q
    |||||||||||||| ||||||  |||||||||||| |||||||||||||||||||    
T  20712235 tactttgaacatgtaattcaatcaacaacaattcagttatccataacttcataca 20712289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 30 - 170
Target Start/End: Original strand, 19405610 - 19405751
Alignment:
Q  30 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcacc-aattgagcatattttcaacatataccaacttctcatactttgaacatg 128  Q
    ||||||||||||||||||||||||||||| |||||| || ||||||||| | ||||||||||||||||||||||||||   |||||||||||||||||||    
T  19405610 aattgatcatgaaacttatcacaattcaacaacaacgaatcataattcaactaattgagcatattttcaacatatacccttttctcatactttgaacatg 19405709  T
Q  129 tgattcaactaacaacaattcaattatccataacttcataca 170  Q
      ||||||||||||| ||||||||||||||||||||||||||    
T  19405710 aaattcaactaacaataattcaattatccataacttcataca 19405751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 168 - 356
Target Start/End: Original strand, 21397352 - 21397540
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagatagag 267  Q
    |||||| ||||||||| ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||      
T  21397352 acaattaatcaattcatccaattaagcacttttcatacaaataattgaaaattacaataagtgattatgatgaattctaacccccttaccttagttaggt 21397451  T
Q  268 taa--tccctagcttaggcttcaattttgctcctagctc-tcatccaatccttgattcttcaagttcctcttctctctaacccttttctcct 356  Q
    |||  || ||| |||||||||||||||| ||||||| || ||  |||| ||||||||||||||| ||||||  ||| |||||||||||||||    
T  21397452 taatctctctatcttaggcttcaatttttctcctagatcttctcccaacccttgattcttcaag-tcctct--tctttaacccttttctcct 21397540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 168 - 356
Target Start/End: Original strand, 21906959 - 21907147
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagatagag 267  Q
    |||||| || |||||||||||||||||||||||||||| |||||||||||||||  |||| |||||||||| |||||| ||||||||||||||| || |     
T  21906959 acaattaattaattcacccaattaagcacttttcatacaaataattgaaaattgtgataaatgattatgataaattct-acccccttaccttagttatat 21907057  T
Q  268 ta--atccctagcttaggcttcaattttgctcctagctctcatcc-aatccttgattcttcaagttcctcttctctctaacccttttctcct 356  Q
    ||   || ||||||||||||||||||||||||||||||||  ||| || ||||||||||||||| ||||||||||||| |||||||||||||    
T  21907058 tactctctctagcttaggcttcaattttgctcctagctcttctccaaacccttgattcttcaag-tcctcttctctct-acccttttctcct 21907147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 175 - 358
Target Start/End: Complemental strand, 21646720 - 21646538
Alignment:
Q  175 atcaattcacccaattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagatagagtaa--tc 272  Q
    |||||||||||||| |||||||||||||||| ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| |||  |||  ||    
T  21646720 atcaattcacccaaataagcacttttcatacaaataattgaaa-ttgcaataagtgattatgatgaattttaacccccttaccttag-taggttaatctc 21646623  T
Q  273 cctagcttaggcttcaattttgctcctagctc-tcatccaatccttgattcttcaagttcctcttctctctaacccttttctccttt 358  Q
     |||| |||||||||||||||||||||||||| ||  |||| ||||||||||||||| ||||||||||| | ||| |||||||||||    
T  21646622 tctagtttaggcttcaattttgctcctagctcttctcccaacccttgattcttcaag-tcctcttctct-ttaccattttctccttt 21646538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 30 - 170
Target Start/End: Original strand, 21397165 - 21397305
Alignment:
Q  30 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcat--actttgaacat 127  Q
    ||||||||||||||||||||||||||||  |||||||| |||||||||||||||||||||||||||||||| ||||| | || ||||  |||||||||||    
T  21397165 aattgatcatgaaacttatcacaattcatcaacaacaatgcataattcaccaattgagcatattttcaacacataccca-ttttcatacactttgaacat 21397263  T
Q  128 gtgattcaactaacaacaattcaattatccataacttcataca 170  Q
    || ||||||||||| ||||||||||||| ||||||||||||||    
T  21397264 gtaattcaactaac-acaattcaattattcataacttcataca 21397305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 229 - 357
Target Start/End: Complemental strand, 22662608 - 22662477
Alignment:
Q  229 tgattatgatgaattctaacccccttaccttagatagagtaatc--cctagcttaggcttcaattttgctcctagctctcatccaatccttgattcttca 326  Q
    |||||||||||||||||| |||||||||||||| |||| |||||  |||||||||| |||||||||| ||||||||||||  |||||||||||||||||     
T  22662608 tgattatgatgaattctatcccccttaccttagttagattaatctccctagcttagacttcaatttttctcctagctctctcccaatccttgattcttct 22662509  T
Q  327 agttc-ctcttctctctaacccttttctcctt 357  Q
    ||||| | ||||||||||||||||||||||||    
T  22662508 agttctcccttctctctaacccttttctcctt 22662477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 30 - 170
Target Start/End: Original strand, 4865336 - 4865475
Alignment:
Q  30 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatgt 129  Q
    ||||||||||||||| ||||||||||||  ||| |||| |||||||||||||||||||||||||||| ||  ||||| | || |||||||||||||||      
T  4865336 aattgatcatgaaacatatcacaattcatcaaccacaatgcataattcaccaattgagcatattttc-acccatacccatttttcatactttgaacatac 4865434  T
Q  130 gattcaactaacaacaattcaattatccataacttcataca 170  Q
     |||||||||||||||||||||| || ||||||||||||||    
T  4865435 aattcaactaacaacaattcaatcattcataacttcataca 4865475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 31 - 170
Target Start/End: Original strand, 11584125 - 11584267
Alignment:
Q  31 attgatcatgaaacttatcacaattcaataaca---acaaagcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacat 127  Q
    |||||||||||||| ||||||||||||| ||||   |||||||||||||||||||||||||||||||||||||||||||   |||  | ||||  |||||    
T  11584125 attgatcatgaaacatatcacaattcaacaacaacaacaaagcataattcaccaattgagcatattttcaacatatacccttttcatacacttgaaacat 11584224  T
Q  128 gtgattcaactaacaacaattcaattatccataacttcataca 170  Q
    |   |||||||||||||||||||||||| ||||||||||||||    
T  11584225 gaatttcaactaacaacaattcaattattcataacttcataca 11584267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 16 - 156
Target Start/End: Original strand, 3673922 - 3674061
Alignment:
Q  16 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaa-ttgagcatattttcaacatataccaacttctc 114  Q
    |||||||||| || ||||||||||||||||||||||||||||| ||||||| ||||||||||| ||| ||||||||| |||||||||||||||  |||||    
T  3673922 caacaacaac-atcaattgatcatgaaacttatcacaattcaacaacaacatagcataattcaacaatttgagcata-tttcaacatataccactttctc 3674019  T
Q  115 atactttgaacatgtgattcaactaacaacaattcaattatc 156  Q
    ||||||||| ||||  |||   ||||||||||||||||||||    
T  3674020 atactttgatcatgaaatttccctaacaacaattcaattatc 3674061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 229 - 350
Target Start/End: Original strand, 23494241 - 23494366
Alignment:
Q  229 tgattatgatgaattctaacccccttaccttagatagagtaat-ccctagcttaggcttcaattttgctcctag---ctctcatccaatccttgattctt 324  Q
    |||||||||||| |||||||||||||||||||| |||| |||| |||||||| | |||||| ||| ||||||||   ||||| |||||||||||| ||||    
T  23494241 tgattatgatgatttctaacccccttaccttagttagattaattccctagctcaagcttcactttagctcctaggttctctcttccaatccttgaatctt 23494340  T
Q  325 caagttcctcttctctctaacccttt 350  Q
    ||||||||||||||||||||||||||    
T  23494341 caagttcctcttctctctaacccttt 23494366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 215 - 351
Target Start/End: Original strand, 432770 - 432907
Alignment:
Q  215 aaaattgcaataagtgattatgatgaattctaacccccttaccttagatagagtaa-tccctagcttaggcttcaattttgctcctagctctcatccaat 313  Q
    ||||||||| ||| ||||||||||||||||||||||||||||||||| ||||  || |||||||||   |||||| ||| ||||||||||||| ||||||    
T  432770 aaaattgcagtaaatgattatgatgaattctaacccccttaccttagttagatcaattccctagctctagcttcactttagctcctagctctcttccaat 432869  T
Q  314 ccttgattcttcaagttcctcttctctctaaccctttt 351  Q
     ||||| |||||||| | || |||||||||||||||||    
T  432870 tcttgaatcttcaagcttctattctctctaaccctttt 432907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 30 - 170
Target Start/End: Original strand, 28261594 - 28261729
Alignment:
Q  30 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttca-acatataccaacttctcatactttgaacatg 128  Q
    |||||||||| |||| |||||||||| |  |||||||| ||||||||||||||||||||||||||||| ||||||      || |||||||||||||||     
T  28261594 aattgatcataaaacatatcacaatttatcaacaacaatgcataattcaccaattgagcatattttcacacatat------ttttcatactttgaacata 28261687  T
Q  129 tgattcaactaacaacaattcaattatccataacttcataca 170  Q
      |||||||||||||||||||||| || ||||||||||||||    
T  28261688 caattcaactaacaacaattcaatcattcataacttcataca 28261729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 168 - 260
Target Start/End: Original strand, 11584314 - 11584405
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttacctta 260  Q
    |||||| || |||||| |||||||||||||| |||||| |||||||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  11584314 acaattaattaattcatccaattaagcacttatcatacaaataattgaaaattacaa-aagtgattatgatgaattctaacccccttacctta 11584405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 30 - 170
Target Start/End: Original strand, 24475653 - 24475790
Alignment:
Q  30 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcat--actttgaacat 127  Q
    ||||||||||||||| ||  ||||||||  |||||||| |||||||||||||||||||||||||||| ||| ||||| | || ||||  |||||||||||    
T  24475653 aattgatcatgaaacata--acaattcatcaacaacaatgcataattcaccaattgagcatattttc-acacataccca-ttttcatacactttgaacat 24475748  T
Q  128 gtgattcaactaacaacaattcaattatccataacttcataca 170  Q
    || ||||||||||| ||||||||||||| ||||||||||||||    
T  24475749 gtaattcaactaac-acaattcaattattcataacttcataca 24475790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 229 - 351
Target Start/End: Original strand, 7728743 - 7728866
Alignment:
Q  229 tgattatgatgaattctaacccccttaccttagatagagtaat-ccctagcttaggcttcaattttgctcctagctctcatccaatccttgattcttcaa 327  Q
    ||||||||||||||||||||||||||||||||| ||||  ||| |||| |||   |||||| ||| ||||||||||||| || |||| |||| |||||||    
T  7728743 tgattatgatgaattctaacccccttaccttagttagatcaattccctggctctagcttcactttagctcctagctctcttctaatctttgaatcttcaa 7728842  T
Q  328 gttcctcttctctctaaccctttt 351  Q
    ||||||||||||||||||| ||||    
T  7728843 gttcctcttctctctaaccttttt 7728866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 16 - 156
Target Start/End: Original strand, 7728480 - 7728619
Alignment:
Q  16 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaa-ttgagcatattttcaacatataccaacttctc 114  Q
    |||||||||| || |||||| |||||| ||||||||||||||| ||||||| ||||||||||| ||| ||||||||| |||||||||||| ||  |||||    
T  7728480 caacaacaac-atcaattgaacatgaatcttatcacaattcaacaacaacatagcataattcaacaatttgagcata-tttcaacatatatcactttctc 7728577  T
Q  115 atactttgaacatgtgattcaactaacaacaattcaattatc 156  Q
    ||||||||||||||  |||  || |||||||| |||||||||    
T  7728578 atactttgaacatgaaatttcaccaacaacaaatcaattatc 7728619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 30 - 170
Target Start/End: Complemental strand, 21646913 - 21646774
Alignment:
Q  30 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttca-acatataccaacttctcatactttgaacatg 128  Q
    ||||||||||||||| ||||||||||||  |||||| |  ||||||||||||||||| |||||||||| |||||  |||  |||  | ||||| ||||||    
T  21646913 aattgatcatgaaacatatcacaattcatcaacaacgatacataattcaccaattgaacatattttcatacata-cccattttcatacacttttaacatg 21646815  T
Q  129 tgattcaactaacaacaattcaattatccataacttcataca 170  Q
    | ||||||||||| ||||||||||||| ||||||||||||||    
T  21646814 taattcaactaac-acaattcaattattcataacttcataca 21646774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 168 - 347
Target Start/End: Original strand, 3674122 - 3674303
Alignment:
Q  168 acaatttatcaattcacccaattaagcactt-ttcataccaataattgaaaattgcaataag--tgattatgatgaattctaacccccttaccttagata 264  Q
    |||||| ||||||| || ||||||||||||| ||||||| || ||||||||||| || |||   ||||||||||||||||||||||||||||||||| ||    
T  3674122 acaattaatcaatt-actcaattaagcacttattcatac-aacaattgaaaattacactaaaaatgattatgatgaattctaacccccttaccttagtta 3674219  T
Q  265 gagtaa-tccctagcttaggcttcaattttgctcctagctctcatccaatccttgattcttcaagttcctcttctctctaaccc 347  Q
    || ||| ||||||||| | |||||| ||| |||||||| ||   |||  | ||||| |||||||| ||||||||||| ||||||    
T  3674220 gattaattccctagctcaagcttcactttagctcctagatcctctcctcttcttgaatcttcaagctcctcttctctataaccc 3674303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 32 - 167
Target Start/End: Complemental strand, 5451015 - 5450880
Alignment:
Q  32 ttgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaatt-gagcatattttcaacatataccaacttctcatactttgaacatgtg 130  Q
    |||| ||||||  |||||||||||||| ||||||| ||||||||||| ||||| ||||||| || ||||||||| ||  |||||||||||||||||||      
T  5451015 ttgaacatgaattttatcacaattcaacaacaacatagcataattcatcaatttgagcataatt-caacatatatcactttctcatactttgaacatgaa 5450917  T
Q  131 attcaactaacaacaattcaattatccataacttcat 167  Q
    |||  || |||||||||||||||||| | ||||||||    
T  5450916 atttcaccaacaacaattcaattatcaacaacttcat 5450880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 44 - 167
Target Start/End: Original strand, 19862296 - 19862419
Alignment:
Q  44 cttatcacaattcaataacaacaaagcataattcaccaatt-gagcatattttcaacatataccaacttctcatactttgaacatgtgattcaactaaca 142  Q
    ||||||||||||||| ||||||| ||||||||||| ||||| ||||||| || ||||||||| ||  |||||||||||||||||||  |||  || ||||    
T  19862296 cttatcacaattcaacaacaacatagcataattcaacaatttgagcataatt-caacatatatcactttctcatactttgaacatgaaatttcaccaaca 19862394  T
Q  143 acaattcaattatccataacttcat 167  Q
    |||||||||||||| | ||||||||    
T  19862395 acaattcaattatcaacaacttcat 19862419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 167
Target Start/End: Original strand, 23493979 - 23494129
Alignment:
Q  16 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattc-accaattgagcatattttcaacatataccaacttctc 114  Q
    |||||||||| || |||||| |||||| ||||||||||||||| ||||||| |||||||||| |||||||  ||||| | |||||||||||| | |  ||    
T  23493979 caacaacaac-atcaattgaacatgaatcttatcacaattcaacaacaacatagcataattcaaccaatttcgcata-tctcaacatatacctattcttc 23494076  T
Q  115 atactttgaacatgtgattcaactaacaacaattcaattatccataacttcat 167  Q
    |||||||||||||   |||| ||||| |||||||||||| |||| ||||||||    
T  23494077 atactttgaacataaaattccactaataacaattcaattttccacaacttcat 23494129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 186 - 350
Target Start/End: Original strand, 16595784 - 16595951
Alignment:
Q  186 caattaagcactt-ttcataccaataattgaaaattg-caataag-tgattatgatgaattctaacccccttaccttagatagagtaa-tccctagctta 281  Q
    ||||||||||||| ||||||| ||||||||||||||  || |||  |||||||||||||||||||||||||||||||||  ||| ||| ||| ||||| |    
T  16595784 caattaagcacttattcatac-aataattgaaaatttacactaaaatgattatgatgaattctaacccccttaccttagtaagattaattccatagctca 16595882  T
Q  282 ggcttcaattttgctcctagctctcatccaatccttgattcttcaagttcctcttctctctaacccttt 350  Q
     | |||| ||| |||||||| ||   |||||  ||||| |||||||| |||||||||||||||||||||    
T  16595883 agtttcactttagctcctaggtcctctccaactcttgaatcttcaagctcctcttctctctaacccttt 16595951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 21650769 - 21650829
Alignment:
Q  31 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 91  Q
    |||||||||||||||||||||||||||| |||||| | |||||||||||||||||||||||    
T  21650769 attgatcatgaaacttatcacaattcaacaacaaccatgcataattcaccaattgagcata 21650829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 17 - 168
Target Start/End: Original strand, 21906778 - 21906910
Alignment:
Q  17 aacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcat 116  Q
    ||||||||| || ||||||||||||||||||||||||||||  ||||||| ||||||||||| ||||||| ||||||||||                  |    
T  21906778 aacaacaac-atcaattgatcatgaaacttatcacaattcatcaacaacatagcataattcatcaattgaacatattttca------------------t 21906858  T
Q  117 actttgaacatgtgattcaactaacaacaattcaattatccataacttcata 168  Q
    ||||||||||||| ||||||| |||| |||||||||||||||||||||||||    
T  21906859 actttgaacatgtaattcaaccaacatcaattcaattatccataacttcata 21906910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 168 - 328
Target Start/End: Complemental strand, 23981503 - 23981336
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaattgcaataagtgatta------tgatgaattctaacccccttaccttag 261  Q
    |||||| |||||| |||  |||||||||||| |||||| ||||||||||||||||||||||||||||      |||||||  ||||||||||||||| ||    
T  23981503 acaattaatcaatgcactaaattaagcacttatcatacaaataattgaaaattgcaataagtgattatgattttgatgaagactaacccccttacctaag 23981404  T
Q  262 at--agagtaatccctagcttaggcttcaattttgctcct-agctctcatccaatccttgattcttcaag 328  Q
    ||  ||| |||| || | ||||||||||||||| |||||| ||||| |  ||||| ||||||||||||||    
T  23981403 atgaagattaat-ccaaacttaggcttcaatttagctcctaagctcac-cccaattcttgattcttcaag 23981336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 30 - 167
Target Start/End: Original strand, 16595581 - 16595717
Alignment:
Q  30 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatgt 129  Q
    |||||| |||||| || | || ||||||| | ||||| | |||||||||| | |||||||||||| ||||||||||||  |||||||||||||||||||     
T  16595581 aattgaacatgaatctcaacataattcaacatcaacataacataattcacaatttgagcatattt-caacatataccactttctcatactttgaacatga 16595679  T
Q  130 gattcaactaacaacaattcaattatccataacttcat 167  Q
     |||   ||| |||||||||||||||| | ||||||||    
T  16595680 aatttctctatcaacaattcaattatcaacaacttcat 16595717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 229 - 351
Target Start/End: Complemental strand, 5450767 - 5450643
Alignment:
Q  229 tgattatgatgaattctaacccccttaccttagatagagt-aatccctagcttaggcttcaattttgctcctagc-tctcatccaatccttgattcttca 326  Q
    ||||||||||||||||||||||||||||||||  ||   | ||| ||||||  | |||||| ||| ||||||||  |||| |||||| ||||| ||||||    
T  5450767 tgattatgatgaattctaacccccttaccttaattattatcaattcctagcccaagcttcactttagctcctaggatctcttccaattcttgaatcttca 5450668  T
Q  327 agttcctcttctctctaaccctttt 351  Q
    || ||||||||||||||||||||||    
T  5450667 agctcctcttctctctaaccctttt 5450643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 30 - 156
Target Start/End: Original strand, 28902264 - 28902390
Alignment:
Q  30 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaa-ttgagcatattttcaacatataccaacttctcatactttgaacatg 128  Q
    |||||| |||||| ||||||||||||||| ||||||| ||||||||| | ||| |||||||||  ||||||||||| ||  ||||||||||||||||| |    
T  28902264 aattgaacatgaatcttatcacaattcaacaacaacatagcataattgatcaatttgagcata-attcaacatatatcactttctcatactttgaacacg 28902362  T
Q  129 tgattcaactaacaacaattcaattatc 156  Q
       ||  || ||||||||||||||||||    
T  28902363 aagtttcaccaacaacaattcaattatc 28902390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 30 - 156
Target Start/End: Original strand, 28938659 - 28938785
Alignment:
Q  30 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaa-ttgagcatattttcaacatataccaacttctcatactttgaacatg 128  Q
    |||||| |||||| ||||||||||||||| ||||||| ||||||||| | ||| |||||||||  ||||||||||| ||  ||||||||||||||||| |    
T  28938659 aattgaacatgaatcttatcacaattcaacaacaacatagcataattgatcaatttgagcata-attcaacatatatcactttctcatactttgaacacg 28938757  T
Q  129 tgattcaactaacaacaattcaattatc 156  Q
       ||  || ||||||||||||||||||    
T  28938758 aagtttcaccaacaacaattcaattatc 28938785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 16 - 156
Target Start/End: Original strand, 432523 - 432662
Alignment:
Q  16 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaatt-gagcatattttcaacatataccaacttctc 114  Q
    |||||||||| || |||||| |||||| |||| |||||| ||| ||||||| || |||||||| ||||| ||||||| || ||||||||| ||  |||||    
T  432523 caacaacaac-atcaattgaacatgaatcttaccacaatccaacaacaacatagtataattcatcaatttgagcataatt-caacatatatcattttctc 432620  T
Q  115 atactttgaacatgtgattcaactaacaacaattcaattatc 156  Q
    ||||||||||||||   ||  || ||||||||||||||||||    
T  432621 atactttgaacatgaagtttcaccaacaacaattcaattatc 432662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 2031884 - 2031944
Alignment:
Q  31 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 91  Q
    |||||||||||||| ||||||||||||  |||||| | |||||||||||||||||||||||    
T  2031884 attgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 2031944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 11342759 - 11342819
Alignment:
Q  31 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 91  Q
    |||||||||||||| ||||||||||||  |||||| | |||||||||||||||||||||||    
T  11342759 attgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 11342819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 21205000 - 21205060
Alignment:
Q  31 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 91  Q
    |||||||||||||| ||||||||||||  |||||| | |||||||||||||||||||||||    
T  21205000 attgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 21205060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 229 - 349
Target Start/End: Original strand, 21651019 - 21651137
Alignment:
Q  229 tgattatgatgaattctaacccccttaccttagat--agagtaatccctagcttaggcttcaattttgctcct-agctctcatccaatccttgattcttc 325  Q
    |||||||||| |||  |||||||||||||||||||  ||| ||||||| | ||||| ||||||||| |||||| ||||| | |||||||||| |||||||    
T  21651019 tgattatgataaatattaacccccttaccttagatgaagattaatccc-aacttagacttcaatttagctcctaagctcac-tccaatccttaattcttc 21651116  T
Q  326 aagttcctcttctctctaaccctt 349  Q
    ||||   |||||||||||||||||    
T  21651117 aagt---tcttctctctaaccctt 21651137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 229 - 331
Target Start/End: Complemental strand, 27182502 - 27182399
Alignment:
Q  229 tgattatgatgaattctaacccccttaccttag--atagagtaatccctagcttaggcttcaattttgctcct-agctctcatccaatccttgattcttc 325  Q
    |||||||||||||  ||||||||||||||||||  | ||| ||||||| | ||||||||||||||| |||||| ||||| | |||||| |||||||||||    
T  27182502 tgattatgatgaagactaacccccttaccttaggtaaagattaatccc-aacttaggcttcaatttagctcctaagctcac-tccaattcttgattcttc 27182405  T
Q  326 aagttc 331  Q
    ||||||    
T  27182404 aagttc 27182399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 361
Target Start/End: Complemental strand, 32966073 - 32965941
Alignment:
Q  229 tgattatgatgaattctaacccccttaccttagatagagtaa-tccctagcttaggcttcaattttgctccta-gctctcatccaatccttgattcttca 326  Q
    |||||||||||||||||||||| |||||||||| ||||  || ||||||||  | |||||| ||| ||||||| | |||| |||  | ||||| ||||||    
T  32966073 tgattatgatgaattctaaccctcttaccttagttagatcaattccctagcccaagcttcactttagctcctaggttctc-tcctcttcttgaatcttca 32965975  T
Q  327 agttcctcttctctctaacccttttctcctttgct 361  Q
    |||||||| | |||||||||||||||  |||||||    
T  32965974 agttcctcct-tctctaacccttttcctctttgct 32965941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 16 - 156
Target Start/End: Complemental strand, 21222795 - 21222656
Alignment:
Q  16 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaatt-gagcatattttcaacatataccaacttctc 114  Q
    |||||||||| || |||||| |||||| ||||||||||||||| ||||||| |||| |||| | || || |||||||  ||||||||||| ||  |||      
T  21222795 caacaacaac-attaattgaacatgaatcttatcacaattcaacaacaacatagcacaattaaacatttagagcata-attcaacatataacactttcat 21222698  T
Q  115 atactttgaacatgtgattcaactaacaacaattcaattatc 156  Q
    ||||||||||||||  |||  || |||||||||| |||||||    
T  21222697 atactttgaacatgcaatttcaccaacaacaatttaattatc 21222656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 229 - 266
Target Start/End: Original strand, 28902514 - 28902551
Alignment:
Q  229 tgattatgatgaattctaacccccttaccttagataga 266  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  28902514 tgattatgatgaattctaacccccttaccttagttaga 28902551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 229 - 266
Target Start/End: Original strand, 28938909 - 28938946
Alignment:
Q  229 tgattatgatgaattctaacccccttaccttagataga 266  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  28938909 tgattatgatgaattctaacccccttaccttagttaga 28938946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 231 - 266
Target Start/End: Complemental strand, 21297098 - 21297063
Alignment:
Q  231 attatgatgaattctaacccccttaccttagataga 266  Q
    ||||||||||||||||||||||||||||||| ||||    
T  21297098 attatgatgaattctaacccccttaccttagttaga 21297063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 319 - 349
Target Start/End: Original strand, 11584466 - 11584496
Alignment:
Q  319 attcttcaagttcctcttctctctaaccctt 349  Q
    |||||||||||||||||||||||||||||||    
T  11584466 attcttcaagttcctcttctctctaaccctt 11584496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 58
Target Start/End: Original strand, 23466517 - 23466558
Alignment:
Q  16 caacaacaaccatgaattgatcatgaaacttatcacaattcaa 58  Q
    |||||||||| || |||||||||||||||||||||||||||||    
T  23466517 caacaacaac-atcaattgatcatgaaacttatcacaattcaa 23466558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 156
Target Start/End: Original strand, 21617076 - 21617215
Alignment:
Q  16 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaatt-gagcatattttcaacatataccaacttctc 114  Q
    |||||||||| || |||||| |||||| || |||||||||||| ||||||| || | |||||| || || |||||||  ||||||||||| ||  |||      
T  21617076 caacaacaac-atcaattgaacatgaatctcatcacaattcaacaacaacatagaacaattcaacatttagagcata-gttcaacatataacactttcat 21617173  T
Q  115 atactttgaacatgtgattcaactaacaacaattcaattatc 156  Q
    |||||| |||||||  |||  |||||||||||| ||||||||    
T  21617174 atacttggaacatgcaatttcactaacaacaatccaattatc 21617215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 260
Target Start/End: Original strand, 21617294 - 21617370
Alignment:
Q  186 caattaagcacttt-tcataccaataattgaaaa-ttgcaataagtgattatgat-gaattctaacccccttacctta 260  Q
    |||||||||||||  |||||| |||||||||||| || || ||| |||||||||| ||||||||||||||||||||||    
T  21617294 caattaagcacttaatcatac-aataattgaaaaattacactaaatgattatgattgaattctaacccccttacctta 21617370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 229 - 261
Target Start/End: Complemental strand, 21310634 - 21310602
Alignment:
Q  229 tgattatgatgaattctaacccccttaccttag 261  Q
    ||||||||||||||| |||||||||||||||||    
T  21310634 tgattatgatgaattttaacccccttaccttag 21310602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 128; Significance: 4e-66; HSPs: 47)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 15 - 170
Target Start/End: Original strand, 31628327 - 31628481
Alignment:
Q  15 tcaacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctc 114  Q
    ||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  31628327 tcaacaacaac-atcaattgatcatgaaacttatcacaattcaacaacaacaaagcataattcaccaattaagcatattttcaacatataccaacttctc 31628425  T
Q  115 atactttgaacatgtgattcaactaacaacaattcaattatccataacttcataca 170  Q
    ||||||||||||||| |||||||||||||||||||||||||| |||||||||||||    
T  31628426 atactttgaacatgtaattcaactaacaacaattcaattatcaataacttcataca 31628481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 168 - 356
Target Start/End: Original strand, 32899050 - 32899240
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagatagag 267  Q
    |||||| ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||      
T  32899050 acaattaatcaattcaccaaattaagcacttttcataccaataattgaaaattacaataagtgattatgatgaattctaacccccttaccttagttaggt 32899149  T
Q  268 taatc--cctagcttaggcttcaattttgctcctagctc-tcatccaatccttgattcttcaagttcctcttctctctaacccttttctcct 356  Q
    |||||   ||||||||| ||||||||||||||||||||| ||  |||| ||||||||||||||| |||||||||||||||||||||| ||||    
T  32899150 taatctatctagcttagacttcaattttgctcctagctcttctcccaacccttgattcttcaag-tcctcttctctctaacccttttatcct 32899240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 186 - 353
Target Start/End: Original strand, 18777407 - 18777576
Alignment:
Q  186 caattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagatagagtaa--tccctagcttagg 283  Q
    |||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||  |||  || ||||||||||    
T  18777407 caattaagcacttttcatacaaataattgaaaattccaataagtgattatgatgaattctaacccccttaccttagttaggttaatctctctagcttagg 18777506  T
Q  284 cttcaattttgctcctagctc-tcatccaatccttgattcttcaagttcctcttctctctaacccttttct 353  Q
    ||||||||||||||||||||| ||  |||| ||||||||||||||| ||||||||||||||||||||||||    
T  18777507 cttcaattttgctcctagctcttctcccaacccttgattcttcaag-tcctcttctctctaacccttttct 18777576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 168 - 356
Target Start/End: Complemental strand, 13014697 - 13014507
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaa--taattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagatag 265  Q
    |||||| |||||||||||||||| |||||||||||||| ||  |||||||||||| ||||||||||||||||| |||||||||||||||||||||| |||    
T  13014697 acaattaatcaattcacccaatttagcacttttcatacaaacataattgaaaattacaataagtgattatgataaattctaacccccttaccttag-tag 13014599  T
Q  266 agtaa--tccctagcttaggcttcaattttgctcctagctctcatccaatccttgattcttcaagttcctcttctctctaacccttttctcct 356  Q
      |||  |||||||||||||||| |||||||||||||||||||  | | |||||||||||||||| |||||||||||||||||||||||||||    
T  13014598 gttaatctccctagcttaggcttaaattttgctcctagctctccccaagtccttgattcttcaag-tcctcttctctctaacccttttctcct 13014507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 31 - 170
Target Start/End: Original strand, 18777220 - 18777359
Alignment:
Q  31 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatgtg 130  Q
    |||||||||||||||||||||||||||  ||||||| ||||||||||||||||||| ||||||||||||| ||||| | || |||||||||||||||||     
T  18777220 attgatcatgaaacttatcacaattcatcaacaacatagcataattcaccaattgaacatattttcaacacatacccatttttcatactttgaacatgta 18777319  T
Q  131 attcaactaacaacaattcaattatccataacttcataca 170  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  18777320 attcaactaacaacaattcaattatccataacttcataca 18777359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 168 - 350
Target Start/End: Original strand, 18570539 - 18570721
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagatagag 267  Q
    |||||| ||||||||| |||||||||||||| |||||| |||||||||||||| ||| || ||||||||||||||||||||||||||||||||| ||       
T  18570539 acaattaatcaattcatccaattaagcacttatcatacaaataattgaaaattacaa-aattgattatgatgaattctaacccccttaccttag-tatgt 18570636  T
Q  268 taa--tccctagcttaggcttcaattttgctcctagctctcatccaatccttgattcttcaagttcctcttctctctaacccttt 350  Q
    |||  ||| ||||||||||||||||||||||||||||||    ||||||||||||||||||||||||||||||||||||||||||    
T  18570637 taatctccttagcttaggcttcaattttgctcctagctcaaccccaatccttgattcttcaagttcctcttctctctaacccttt 18570721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 168 - 356
Target Start/End: Original strand, 16086277 - 16086466
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagatagag 267  Q
    |||||| || |||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||      
T  16086277 acaattaattaattcacccaattaagcacttttcatacaattaattgaaaattgcaataaatgattatgatgaattctaacccccttaccttagttaggt 16086376  T
Q  268 taa--tccctagcttaggcttcaattttgctcctagctc-tcatccaatccttgattcttcaagttcctcttctctctaacccttttctcct 356  Q
    |||  || |||||||||||||||||||||||||||  || ||  |||| ||||||||||||||||| ||||||||||| |||||||||||||    
T  16086377 taatctctctagcttaggcttcaattttgctcctatttcttctcccaacccttgattcttcaagtt-ctcttctctct-acccttttctcct 16086466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 168 - 356
Target Start/End: Original strand, 16106776 - 16106965
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagatagag 267  Q
    |||||| || ||||||| |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||      
T  16106776 acaattaattaattcactcaattaagcacttttcatacaattaattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagttaggt 16106875  T
Q  268 taa--tccctagcttaggcttcaattttgctcctagctc-tcatccaatccttgattcttcaagttcctcttctctctaacccttttctcct 356  Q
    |||  || |||||||||||||||||||| |||||||||| ||  |||| ||||||||||||||| |||| |||||||| |||||||||||||    
T  16106876 taatctctctagcttaggcttcaattttactcctagctcttctcccaacccttgattcttcaag-tcctattctctct-acccttttctcct 16106965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 30 - 170
Target Start/End: Original strand, 32898863 - 32899003
Alignment:
Q  30 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatgt 129  Q
    ||||||||||||||||||||||||||||  ||||| || |||||||||||||||||||||||||||||||| ||||| | || |||||||||||||||||    
T  32898863 aattgatcatgaaacttatcacaattcatcaacaataatgcataattcaccaattgagcatattttcaacacatacccatttttcatactttgaacatgt 32898962  T
Q  130 gattcaactaacaacaattcaattatccataacttcataca 170  Q
     ||||||||||||||||||||||||| ||||||||||||||    
T  32898963 aattcaactaacaacaattcaattattcataacttcataca 32899003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 15 - 170
Target Start/End: Original strand, 16106575 - 16106729
Alignment:
Q  15 tcaacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctc 114  Q
    ||||||||||| || || |||||||||||||||||||||||||| |||||||| | |||||||||||||| ||||||||||||||| ||||  | || ||    
T  16106575 tcaacaacaac-atcaaatgatcatgaaacttatcacaattcaacaacaacaaggtataattcaccaattaagcatattttcaacacatactcatttttc 16106673  T
Q  115 atactttgaacatgtgattcaactaacaacaattcaattatccataacttcataca 170  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||    
T  16106674 atactttgaacatgtaattcaaccaacaacaattcaattatccataacttcataca 16106729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 31 - 170
Target Start/End: Original strand, 18570353 - 18570492
Alignment:
Q  31 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatgtg 130  Q
    |||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||||||||| ||||| | || |||||||||||||||||     
T  18570353 attgatcatgaaacttatcacaattcatcaacaacatagcataattcaccaattgagcatattttcaacacatacccatttttcatactttgaacatgta 18570452  T
Q  131 attcaactaacaacaattcaattatccataacttcataca 170  Q
    ||| |||||| ||||||||||||||||||||| |||||||    
T  18570453 atttaactaataacaattcaattatccataacatcataca 18570492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 168 - 356
Target Start/End: Original strand, 22441194 - 22441380
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagatagag 267  Q
    |||||| |||||||||| ||||||||||||| |||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||      
T  22441194 acaattaatcaattcactcaattaagcacttatcatacaaataattgaaaattgcaa-aagtgattatgatgaattctaacccccttaccttag-taggt 22441291  T
Q  268 taa--tccctagcttaggcttcaattttgctcctagctctcatccaatccttgattcttcaagttcctcttctctctaacccttttctcct 356  Q
    |||  ||| |||||||| |||||||||| |||||||||||| |   | ||||||||||||||| |||||||||||||||||||||||||||    
T  22441292 taatctccatagcttagacttcaatttttctcctagctctc-ttttacccttgattcttcaag-tcctcttctctctaacccttttctcct 22441380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 30 - 170
Target Start/End: Original strand, 18432716 - 18432856
Alignment:
Q  30 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatgt 129  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| ||| | || ||||||||| |||||||    
T  18432716 aattgatcatgaaacttatcacaattcaacaacaacaaagcataattcaccaattaagcatattttcaacatacacccatttttcatacttttaacatgt 18432815  T
Q  130 gattcaactaacaacaattcaattatccataacttcataca 170  Q
     ||||||  ||||||||||||| ||| ||||||||||||||    
T  18432816 aattcaatcaacaacaattcaagtattcataacttcataca 18432856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 15 - 170
Target Start/End: Original strand, 16086076 - 16086230
Alignment:
Q  15 tcaacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctc 114  Q
    ||||||||||| || || |||||||||||||||||| ||||||| |||||||| | |||||||||||||| ||||||||||||||| ||||| | || ||    
T  16086076 tcaacaacaac-atcaaatgatcatgaaacttatcataattcaacaacaacaaggtataattcaccaattaagcatattttcaacacatacccatttttc 16086174  T
Q  115 atactttgaacatgtgattcaactaacaacaattcaattatccataacttcataca 170  Q
     |||||||||||||| ||||||| ||||||||||||||||||||||||||||||||    
T  16086175 gtactttgaacatgtaattcaacaaacaacaattcaattatccataacttcataca 16086230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 229 - 351
Target Start/End: Complemental strand, 15079636 - 15079513
Alignment:
Q  229 tgattatgatgaattctaacccccttaccttagatagagtaatccct--agcttaggcttcaattttgctcctagctctcatccaatccttgattcttca 326  Q
    ||||||||||||||||||||||| ||||||||| |||| ||||||||  |||||| |||||| ||||||||||||||||| |||||||||||||||||||    
T  15079636 tgattatgatgaattctaacccc-ttaccttagttagattaatccctctagcttaagcttcacttttgctcctagctctcttccaatccttgattcttca 15079538  T
Q  327 agttcctcttctctctaaccctttt 351  Q
    |||||||||||||||||||||||||    
T  15079537 agttcctcttctctctaaccctttt 15079513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 229 - 361
Target Start/End: Complemental strand, 35135937 - 35135804
Alignment:
Q  229 tgattatgatgaattctaacccccttaccttagatagagtaat-ccctagcttaggcttcaattttgctcctagctctcatccaatccttgattcttcaa 327  Q
    ||||||||||||||||||||||||||||||||| |||| |||| |||||||| | |||||| ||| ||||||||||||| |||||||||||| |||||||    
T  35135937 tgattatgatgaattctaacccccttaccttagttagattaattccctagctcaagcttcactttagctcctagctctcttccaatccttgaatcttcaa 35135838  T
Q  328 gttcctcttctctctaacccttttctcctttgct 361  Q
    |||||||| ||||||||||||||||| |||||||    
T  35135837 gttcctctcctctctaacccttttcttctttgct 35135804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 175 - 352
Target Start/End: Original strand, 18432910 - 18433086
Alignment:
Q  175 atcaattcacccaattaagcacttttcataccaataattgaaaatt-gcaataagtgattatgatgaattctaacccccttaccttagatagagtaa--t 271  Q
    |||||||||||||||||||| |||||||||| |||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| |||  |||  |    
T  18432910 atcaattcacccaattaagctcttttcatac-aataattgaaaatttgcaataa-tgattatgatgaattctaacccccttaccttagttaggttaatct 18433007  T
Q  272 ccctagcttaggcttcaattttgctcctagctc-tcatccaatccttgattcttcaagttcctcttctctctaacccttttc 352  Q
    | |||||||||||||||||||| |||||||||| ||  |||| ||||||||||||||| ||||||  |||||||||||||||    
T  18433008 ctctagcttaggcttcaatttttctcctagctcttctcccaacccttgattcttcaag-tcctct--tctctaacccttttc 18433086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 186 - 356
Target Start/End: Original strand, 18399215 - 18399387
Alignment:
Q  186 caattaagcactt-ttcataccaataattgaaaattgcaataag-tgattatgatgaattctaacccccttaccttagatagagtaatc--cctagctta 281  Q
    ||||||||||||| ||||||| ||||||||||| || || |||  ||||||||| ||||||||||||||||||||||| |||| |||||  |||||||||    
T  18399215 caattaagcacttattcatac-aataattgaaatttacactaaaatgattatgaagaattctaacccccttaccttagttagattaatctccctagctta 18399313  T
Q  282 ggcttcaattttgctcctagctctcatccaatccttgattcttcaagttcctcttctctctaacccttttctcct 356  Q
    | ||||||||||||||||||||||| || |  |||||||| ||||||||| ||||||||||||||||||||||||    
T  18399314 gacttcaattttgctcctagctctcttc-accccttgatttttcaagttcatcttctctctaacccttttctcct 18399387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 229 - 361
Target Start/End: Original strand, 33325015 - 33325148
Alignment:
Q  229 tgattatgatgaattctaacccccttaccttagatagagtaat-ccctagcttaggcttcaattttgctcctagctctcatccaatccttgattcttcaa 327  Q
    ||||||||||||||||||||||||||||||||| ||||  ||| |||||||| | |||||| ||| ||||||||||||| |||||||||||| |||| ||    
T  33325015 tgattatgatgaattctaacccccttaccttagttagatgaattccctagctcaagcttcactttagctcctagctctcttccaatccttgaatctttaa 33325114  T
Q  328 gttcctcttctctctaacccttttctcctttgct 361  Q
    |||||||| ||||||||||||||||| |||||||    
T  33325115 gttcctctcctctctaacccttttcttctttgct 33325148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 30 - 170
Target Start/End: Original strand, 22441007 - 22441147
Alignment:
Q  30 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatgt 129  Q
    |||||||||||||||||||||||| |||  |||||||| |||||||||||||||||||||||||||||||  ||||| | || ||||||||| |||||||    
T  22441007 aattgatcatgaaacttatcacaaatcatgaacaacaatgcataattcaccaattgagcatattttcaactcatacccatttttcatacttttaacatgt 22441106  T
Q  130 gattcaactaacaacaattcaattatccataacttcataca 170  Q
     ||||| |  |  ||||||||||||| ||||||||||||||    
T  22441107 aattcaccccatcacaattcaattattcataacttcataca 22441147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 30 - 170
Target Start/End: Complemental strand, 13014883 - 13014744
Alignment:
Q  30 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatgt 129  Q
    |||||||| |||||||||||||||||||  |||||||| |||||||||||||||||||||||||| ||||  ||||| | || |||||| || |||||      
T  13014883 aattgatcttgaaacttatcacaattcatcaacaacaatgcataattcaccaattgagcatatttccaactcatacccatttttcatac-ttcaacatac 13014785  T
Q  130 gattcaactaacaacaattcaattatccataacttcataca 170  Q
     |||||||||||||||||||||| || ||||||||||||||    
T  13014784 aattcaactaacaacaattcaatcattcataacttcataca 13014744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 16 - 167
Target Start/End: Original strand, 18398998 - 18399148
Alignment:
Q  16 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaa-ttgagcatattttcaacatataccaacttctc 114  Q
    |||||||||| || |||||| |||||| || |||||||||||| ||||||| ||||||||||| ||| ||||||||| ||||||||||||| |  |||||    
T  18398998 caacaacaac-atcaattgaacatgaatctcatcacaattcaacaacaacatagcataattcaacaatttgagcata-tttcaacatatactattttctc 18399095  T
Q  115 atactttgaacatgtgattcaactaacaacaattcaattatccataacttcat 167  Q
    ||||||||||||||  |||   |||||||||||||||||||| | ||||||||    
T  18399096 atactttgaacatgaaatttctctaacaacaattcaattatcaacaacttcat 18399148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 229 - 363
Target Start/End: Complemental strand, 16887716 - 16887581
Alignment:
Q  229 tgattatgatgaattctaacccccttaccttagatagagtaat-ccctagcttaggcttcaattttgctccta-gctctcatccaatccttgattcttca 326  Q
    ||||||||||||||||||||||||||||||||| ||||  ||| |||||| | | |||||| ||| ||||||| | |||| |||  | ||||||||||||    
T  16887716 tgattatgatgaattctaacccccttaccttagttagatcaattccctagttcaagcttcactttagctcctatgttctc-tcctcttcttgattcttca 16887618  T
Q  327 agttcctcttctctctaacccttttctcctttgcttc 363  Q
    ||||||||||||||||||||||||||  |||||||||    
T  16887617 agttcctcttctctctaacccttttcctctttgcttc 16887581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 225 - 356
Target Start/End: Complemental strand, 25640491 - 25640359
Alignment:
Q  225 taagtgattatgatgaattctaacccccttaccttagatagagtaatccct--agcttaggcttcaattttgctcctagctc-tcatccaatccttgatt 321  Q
    ||||||||||||||||||||||||||||||||||||| | |  ||||| ||  || |||||||||||||||||||||||||| ||  |||| ||||||||    
T  25640491 taagtgattatgatgaattctaacccccttaccttagttggt-taatctctctagattaggcttcaattttgctcctagctcttctcccaacccttgatt 25640393  T
Q  322 cttcaagttcctcttctctctaacccttttctcct 356  Q
    ||||||| || |||||||| | |||||||||||||    
T  25640392 cttcaag-tcttcttctctttgacccttttctcct 25640359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 229 - 349
Target Start/End: Original strand, 25919936 - 25920057
Alignment:
Q  229 tgattatgatgaattctaacccccttaccttagatagagtaat-ccctagcttaggcttcaattttgctcctagctctcatccaatccttgattcttcaa 327  Q
    ||||||||||||||||||||||||||||||||| ||||  ||| |||||| |    ||||| ||| |||||||||||||  ||||||||||| |||||||    
T  25919936 tgattatgatgaattctaacccccttaccttagttagatcaattccctagttctaacttcactttagctcctagctctcccccaatccttgaatcttcaa 25920035  T
Q  328 gttcctcttctctctaaccctt 349  Q
    | |||||| |||||||||||||    
T  25920036 gctcctctactctctaaccctt 25920057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 167
Target Start/End: Complemental strand, 18381870 - 18381720
Alignment:
Q  16 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaa-ttgagcatattttcaacatataccaacttctc 114  Q
    |||||||||| || |||||| |||||  ||||||||||||||| ||||||||||||||||||| ||| || ||||||  ||||||||||| ||  |||||    
T  18381870 caacaacaac-atcaattgaacatgactcttatcacaattcaacaacaacaaagcataattcaacaatttaagcata-attcaacatatatcactttctc 18381773  T
Q  115 atactttgaacatgtgattcaactaacaacaattcaattatccataacttcat 167  Q
    ||||||||||||||  |||  || |||||| ||||||||||| | ||||||||    
T  18381772 atactttgaacatgaaatttcaccaacaaccattcaattatcaacaacttcat 18381720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 186 - 349
Target Start/End: Complemental strand, 21411020 - 21410854
Alignment:
Q  186 caattaagcactt-ttcataccaataattgaaaattg-caataag-tgattatgatgaattctaacccccttaccttagatagagtaa-tccctagctta 281  Q
    ||||||||||||| ||||||| ||||||||||||||  || |||  ||||||||||||||||||||||||||||||||| |||| ||| ||||||||| |    
T  21411020 caattaagcacttattcatac-aataattgaaaatttacactaaaatgattatgatgaattctaacccccttaccttagttagattaattccctagctca 21410922  T
Q  282 ggcttcaattttgctcctag-ctctcatccaatccttgattcttcaagttcctcttctctctaaccctt 349  Q
     |||||| ||| ||||||||  |||| |||  | ||||| ||||||||||||| |||||||||||||||    
T  21410921 agcttcactttagctcctagattctc-tcctcttcttgaatcttcaagttccttttctctctaaccctt 21410854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 274 - 356
Target Start/End: Original strand, 31628558 - 31628638
Alignment:
Q  274 ctagcttaggcttcaattttgctcctagctctcatccaatccttgattcttcaagttcctcttctctctaacccttttctcct 356  Q
    |||||||||||||||||||||||||||||||||   | ||||||||||||||||| ||||||||||||| |||||||||||||    
T  31628558 ctagcttaggcttcaattttgctcctagctctctctccatccttgattcttcaag-tcctcttctctct-acccttttctcct 31628638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 156
Target Start/End: Complemental strand, 25367424 - 25367285
Alignment:
Q  16 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaa-ttgagcatattttcaacatataccaacttctc 114  Q
    |||||||||| || |||||| |||||| ||||||||||||||| ||||||| | || |||||| ||| ||||||||| |||||||||| ||||  |||||    
T  25367424 caacaacaac-atcaattgaacatgaatcttatcacaattcaacaacaacataacacaattcaacaatttgagcata-tttcaacataaaccactttctc 25367327  T
Q  115 atactttgaacatgtgattcaactaacaacaattcaattatc 156  Q
    ||||||||||||||  |||   ||||||||||||| ||||||    
T  25367326 atactttgaacatgaaatttctctaacaacaattccattatc 25367285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 30 - 170
Target Start/End: Complemental strand, 28195268 - 28195127
Alignment:
Q  30 aattgatcatgaaa-cttatcacaattcaataacaacaaagcataattcacc-aattgagcatattttcaacatataccaacttctcatactttgaacat 127  Q
    |||||||||| ||| || |||||||||||| |||| ||  |||||||||| | ||||||||| |||| || |||||||||  |||||||||| |||||||    
T  28195268 aattgatcataaaatctcatcacaattcaacaacatcatggcataattcaactaattgagcacattt-catcatataccattttctcatactatgaacat 28195170  T
Q  128 gtgattcaactaacaacaattcaattatccataacttcataca 170  Q
    |  |||  ||||||||||||||||||||| | |||||||||||    
T  28195169 gaaattttactaacaacaattcaattatcaacaacttcataca 28195127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 62 - 167
Target Start/End: Complemental strand, 21411191 - 21411087
Alignment:
Q  62 caacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatgtgattcaactaacaacaattcaattatccataa 161  Q
    ||||| |||||||||||| | |||||||||||| ||||||||||||  |||||||||||||||||||  ||| |  ||||||| ||||||||||| | ||    
T  21411191 caacatagcataattcacaatttgagcatattt-caacatataccactttctcatactttgaacatgaaatttatttaacaaccattcaattatcaacaa 21411093  T
Q  162 cttcat 167  Q
    ||||||    
T  21411092 cttcat 21411087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 15 - 91
Target Start/End: Original strand, 18583376 - 18583451
Alignment:
Q  15 tcaacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 91  Q
    ||||||||||| || ||||||||||||||| ||||||||||||  |||||| | |||||||||||||||||||||||    
T  18583376 tcaacaacaac-atcaattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 18583451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 44 - 167
Target Start/End: Original strand, 21623255 - 21623378
Alignment:
Q  44 cttatcacaattcaataacaacaaagcataattcaccaa-ttgagcatattttcaacatataccaacttctcatactttgaacatgtgattcaactaaca 142  Q
    |||| |||||||||| ||||||| ||||||||||| ||| |||||||||  ||||||||||| ||  |||||||||||||||||||  |||  |  ||||    
T  21623255 cttaccacaattcaacaacaacatagcataattcaacaatttgagcata-attcaacatatatcactttctcatactttgaacatgaaatttcagcaaca 21623353  T
Q  143 acaattcaattatccataacttcat 167  Q
    |||||||||||||| | ||||||||    
T  21623354 acaattcaattatcaacaacttcat 21623378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 26089809 - 26089869
Alignment:
Q  31 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 91  Q
    |||||||||||||||||||||||||||  |||||| | |||||||||||||||||||||||    
T  26089809 attgatcatgaaacttatcacaattcatcaacaaccatgcataattcaccaattgagcata 26089869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 15742401 - 15742341
Alignment:
Q  31 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 91  Q
    |||||||||||||| ||||||||||||  |||||| | |||||||||||||||||||||||    
T  15742401 attgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 15742341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 23994997 - 23995057
Alignment:
Q  31 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 91  Q
    |||||||||||||| ||||||||||||  |||||| | |||||||||||||||||||||||    
T  23994997 attgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 23995057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 35015338 - 35015278
Alignment:
Q  31 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 91  Q
    |||||||||||||| ||||||||||||  |||||| | |||||||||||||||||||||||    
T  35015338 attgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 35015278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 229 - 331
Target Start/End: Original strand, 23148304 - 23148407
Alignment:
Q  229 tgattatgatgaattctaacccccttaccttag--atagagtaatccctagcttaggcttcaattttgctcct-agctctcatccaatccttgattcttc 325  Q
    |||||||||||||  ||||||||||||||||||  | ||| ||||||| | ||||||||||||||| |||||| ||||| | |||||| |||||||||||    
T  23148304 tgattatgatgaagactaacccccttaccttaggtaaagattaatccc-aacttaggcttcaatttagctcctaagctcac-tccaattcttgattcttc 23148401  T
Q  326 aagttc 331  Q
    ||||||    
T  23148402 aagttc 23148407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 229 - 331
Target Start/End: Original strand, 23153755 - 23153858
Alignment:
Q  229 tgattatgatgaattctaacccccttaccttag--atagagtaatccctagcttaggcttcaattttgctcct-agctctcatccaatccttgattcttc 325  Q
    |||||||||||||  ||||||||||||||||||  | ||| ||||||| | ||||||||||||||| |||||| ||||| | |||||| |||||||||||    
T  23153755 tgattatgatgaagactaacccccttaccttaggtaaagattaatccc-aacttaggcttcaatttagctcctaagctcac-tccaattcttgattcttc 23153852  T
Q  326 aagttc 331  Q
    ||||||    
T  23153853 aagttc 23153858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 156
Target Start/End: Complemental strand, 22361952 - 22361813
Alignment:
Q  16 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaa-ttgagcatattttcaacatataccaacttctc 114  Q
    |||||||||| || |||||| ||||||  | |||||||||||| ||||||| ||||||||||| ||| |||||||||  |||||| |||  ||  |||||    
T  22361952 caacaacaac-atcaattgaacatgaatttcatcacaattcaacaacaacatagcataattcatcaatttgagcata-attcaacttatgtcactttctc 22361855  T
Q  115 atactttgaacatgtgattcaactaacaacaattcaattatc 156  Q
    ||||||||||||||  |||  |  ||||||||||||||||||    
T  22361854 atactttgaacatgaaatttcagcaacaacaattcaattatc 22361813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 156
Target Start/End: Original strand, 25651297 - 25651436
Alignment:
Q  16 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaatt-gagcatattttcaacatataccaacttctc 114  Q
    |||||||||| || |||||| |||||| || |||| ||||||| ||||||| |||| |||||| || || ||||||| || ||||||||| ||  ||| |    
T  25651297 caacaacaac-atcaattgaacatgaatctcatcataattcaacaacaacatagcacaattcaacatttagagcataatt-caacatataacactttcac 25651394  T
Q  115 atactttgaacatgtgattcaactaacaacaattcaattatc 156  Q
    ||||||||||||||  |||  || ||||||||||||||||||    
T  25651395 atactttgaacatgcaatttcaccaacaacaattcaattatc 25651436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 18002677 - 18002617
Alignment:
Q  31 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 91  Q
    |||||||||||||| ||||||||||||  |||||| | |||||||||| ||||||||||||    
T  18002677 attgatcatgaaacatatcacaattcatcaacaaccatgcataattcatcaattgagcata 18002617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 186 - 266
Target Start/End: Complemental strand, 25367206 - 25367124
Alignment:
Q  186 caattaagcactt-ttcataccaataattgaaaattg-caataag-tgattatgatgaattctaacccccttaccttagataga 266  Q
    ||||||||||||| ||||||| ||||||||||||||  || |||  ||||||||||||||||||||||||||||||||| ||||    
T  25367206 caattaagcacttattcatac-aataattgaaaatttacactaaaatgattatgatgaattctaacccccttaccttagctaga 25367124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 86
Target Start/End: Complemental strand, 25744385 - 25744331
Alignment:
Q  32 ttgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattga 86  Q
    ||||||||||||| ||||||||||||  |||||||| ||||||||||||| ||||    
T  25744385 ttgatcatgaaacatatcacaattcatcaacaacaatgcataattcaccacttga 25744331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 331
Target Start/End: Original strand, 27751743 - 27751846
Alignment:
Q  229 tgattatgatgaattctaacccccttaccttagatagag--taatccctagcttaggcttcaattttgctcct-agctctcatccaatccttgattcttc 325  Q
    |||||||||||||  ||||||||||||||||||||| ||  ||||||  | ||||||||||||||| |||||| ||||| |  ||||| |||||||||||    
T  27751743 tgattatgatgaagactaacccccttaccttagataaagattaatccaaa-cttaggcttcaatttagctcctaagctcac-cccaattcttgattcttc 27751840  T
Q  326 aagttc 331  Q
    ||||||    
T  27751841 aagttc 27751846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 319 - 349
Target Start/End: Complemental strand, 19983131 - 19983101
Alignment:
Q  319 attcttcaagttcctcttctctctaaccctt 349  Q
    |||||||||||||||||||||||||||||||    
T  19983131 attcttcaagttcctcttctctctaaccctt 19983101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 315 - 351
Target Start/End: Complemental strand, 25367074 - 25367038
Alignment:
Q  315 cttgattcttcaagttcctcttctctctaaccctttt 351  Q
    ||||| |||||||||||||||||||||||||| ||||    
T  25367074 cttgaatcttcaagttcctcttctctctaaccatttt 25367038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 127; Significance: 2e-65; HSPs: 57)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 168 - 350
Target Start/End: Complemental strand, 20561618 - 20561435
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaa-ttgcaataagtgattatgatgaattctaacccccttaccttagataga 266  Q
    |||||| ||||||||||||||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  20561618 acaattaatcaattcacccaattaagcacttttcatacaaataattgaaaaattgcaataa-tgattatgatgaattctaacccccttaccttagttaga 20561520  T
Q  267 gtaatc--cctagcttaggcttcaattttgctcctagctctcatccaatccttgattcttcaagttcctcttctctctaacccttt 350  Q
     |||||  ||||||||||||||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||||||||||    
T  20561519 ttaatctccctagcttaggcttcaattttgctcctagctctctcccaatccttgattcttcaag-tcctcttctctctaacccttt 20561435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 168 - 356
Target Start/End: Complemental strand, 20529840 - 20529650
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagatagag 267  Q
    |||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||      
T  20529840 acaattaatcaattcacccaattaagcacttttcatacaaataattgaaaattgcaataagtgattatgatgaattataacccccttaccttagttaggt 20529741  T
Q  268 taa--tccctagcttaggcttcaattttgctcctagctc-tcatccaatccttgattcttcaagttcctcttctctctaacccttttctcct 356  Q
    |||  || |||||||||||||||||||||||||||| || ||  |||| ||||||||||||||| |||||||||||||||||||||||||||    
T  20529740 taatctctctagcttaggcttcaattttgctcctagatcttctcccaacccttgattcttcaag-tcctcttctctctaacccttttctcct 20529650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 168 - 356
Target Start/End: Complemental strand, 20573179 - 20572991
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattg-aaaattgcaataagtgattatgatgaattctaacccccttaccttagataga 266  Q
    |||||| |||||||||||||||||||||||| |||||| |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  20573179 acaattaatcaattcacccaattaagcacttatcatacaaataattgaaaaattgcaataa-tgattatgatgaattctaacccccttaccttagttaga 20573081  T
Q  267 gtaa--tccctagcttaggcttcaattttgctcctagctctcatccaatccttgattcttcaagttcctcttctctctaacccttttctcct 356  Q
     |||  |||||||||||||||||||||||||||||||||||| | ||  ||||||||||||||| |||| ||||||||||||||||||||||    
T  20573080 ttaatctccctagcttaggcttcaattttgctcctagctctc-ttcaccccttgattcttcaag-tccttttctctctaacccttttctcct 20572991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 30 - 170
Target Start/End: Complemental strand, 20561805 - 20561665
Alignment:
Q  30 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatgt 129  Q
    ||||||||||||||||||||||||||||  ||||||| ||||||||||||||||| | |||| |||||||||||||||| ||||||||||||||||||||    
T  20561805 aattgatcatgaaacttatcacaattcatcaacaacatagcataattcaccaattaaacataatttcaacatataccaatttctcatactttgaacatgt 20561706  T
Q  130 gattcaactaacaacaattcaattatccataacttcataca 170  Q
     |||||||||||||||||||||||||| |||||||||||||    
T  20561705 aattcaactaacaacaattcaattatctataacttcataca 20561665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 15 - 170
Target Start/End: Complemental strand, 20573380 - 20573226
Alignment:
Q  15 tcaacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctc 114  Q
    ||||||||||| || ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| |||||   |||      
T  20573380 tcaacaacaac-atcaattgatcatgaaacttatcacaattcaacaacaacaaaggataattcaccaattgagcatattttcaacacatacccttttcat 20573282  T
Q  115 atactttgaacatgtgattcaactaacaacaattcaattatccataacttcataca 170  Q
    | ||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  20573281 acactttgaacatgtaattcaactaacaacaattcaattatccataacttcataca 20573226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 30 - 165
Target Start/End: Complemental strand, 20654079 - 20653944
Alignment:
Q  30 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatgt 129  Q
    ||||||||||||||||||||||||||||  ||||||  ||||||||||||||||| ||||||||||||| ||||||||| ||||||||||||||||||||    
T  20654079 aattgatcatgaaacttatcacaattcatcaacaacttagcataattcaccaattaagcatattttcaatatataccaatttctcatactttgaacatgt 20653980  T
Q  130 gattcaactaacaacaattcaattatccataacttc 165  Q
     |||||||||||||||||||||||||||||||||||    
T  20653979 aattcaactaacaacaattcaattatccataacttc 20653944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 168 - 357
Target Start/End: Original strand, 21681263 - 21681456
Alignment:
Q  168 acaatttatcaattcacccaattaagcactt-ttcataccaataattgaaaa-ttgcaataagtgattatgatgaattctaacccccttaccttagatag 265  Q
    |||||| ||||||||| | |||||||||||| ||||||| |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||  |||    
T  21681263 acaattaatcaattcaacaaattaagcacttattcatac-aataattgaaaaattgcaataaatgattatgatgaattctaacccccttaccttatttag 21681361  T
Q  266 agtaatc--cctagcttaggcttcaattttgctcctagctctcatccaatccttgattcttcaagttc-ctcttctctctaacccttttctcctt 357  Q
    | |||||  ||||||||||||||||||||| ||||||||||||  |||||||||||||||||||| || | ||||||||||||||||||||||||    
T  21681362 attaatctccctagcttaggcttcaatttttctcctagctctctcccaatccttgattcttcaaggtctcccttctctctaacccttttctcctt 21681456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 168 - 353
Target Start/End: Original strand, 37611928 - 37612114
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagatagag 267  Q
    |||||| ||||||||| | ||||||||||||||||||| ||||||||||||||  ||||||||||||||||||||||||||||||||||||||| |||      
T  37611928 acaattaatcaattcatctaattaagcacttttcatacaaataattgaaaattataataagtgattatgatgaattctaacccccttaccttag-taggt 37612026  T
Q  268 taa--tccctagcttaggcttcaattttgctcctagctc-tcatccaatccttgattcttcaagttcctcttctctctaacccttttct 353  Q
    |||  || ||| ||||||||||||||||||||||||||| ||  |||| ||||||||||||||| || |||||||||||||||||||||    
T  37612027 taatctctctatcttaggcttcaattttgctcctagctcttctcccaacccttgattcttcaag-tcatcttctctctaacccttttct 37612114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 225 - 352
Target Start/End: Complemental strand, 21259426 - 21259298
Alignment:
Q  225 taagtgattatgatgaattctaacccccttaccttagatagagtaat-ccctagcttaggcttcaattttgctcctagctctcatccaatccttgattct 323  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||| |||||||||| |||||||||| ||||||||||||| |||||||||||| |||    
T  21259426 taagtgattatgatgaattctaacccccttaccttagttagattaattccctagcttaagcttcaatttagctcctagctctcttccaatccttgaatct 21259327  T
Q  324 tcaagttcctcttctctctaacccttttc 352  Q
    |||||||||||||||||||||||||||||    
T  21259326 tcaagttcctcttctctctaacccttttc 21259298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 16 - 170
Target Start/End: Original strand, 20481665 - 20481818
Alignment:
Q  16 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctca 115  Q
    |||||||||| || ||||||||||| ||||||||||||||||  |||||||||| ||||||||||||||||||||||| |||||| ||| | | || |||    
T  20481665 caacaacaac-atcaattgatcatgcaacttatcacaattcatcaacaacaaagtataattcaccaattgagcatattatcaacacatatccatttttca 20481763  T
Q  116 tactttgaacatgtgattcaactaacaacaattcaattatccataacttcataca 170  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  20481764 tactttgaacatgtaattcaactaacaacaattcaattattcataacttcataca 20481818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 168 - 356
Target Start/End: Complemental strand, 19993042 - 19992857
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagatagag 267  Q
    |||||| ||||||||| ||||||||||||||||||||| |||||||| ||||| ||| |||||||||||||||||| ||||||||||||||||| ||||     
T  19993042 acaattaatcaattcatccaattaagcacttttcatacaaataattg-aaattacaa-aagtgattatgatgaattataacccccttaccttag-tagat 19992946  T
Q  268 taa--tccctagcttaggcttcaattttgctcctagctctc-atccaatccttgattcttcaagttcctcttctctctaacccttttctcct 356  Q
    |||  ||||||||||||||||||||||| |||||||||||| |||  | ||||||||||||||| |||| ||||||||||||||||||||||    
T  19992945 taatctccctagcttaggcttcaatttttctcctagctctctatc--acccttgattcttcaag-tcctattctctctaacccttttctcct 19992857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 30 - 151
Target Start/End: Complemental strand, 20648003 - 20647882
Alignment:
Q  30 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatgt 129  Q
    ||||||||||||||||||||||||||||  ||||||| ||||||||||||||||| | |||| |||||||||||||||| ||||||||||||||||||||    
T  20648003 aattgatcatgaaacttatcacaattcatcaacaacatagcataattcaccaattaaacataatttcaacatataccaatttctcatactttgaacatgt 20647904  T
Q  130 gattcaactaacaacaattcaa 151  Q
     |||||||||||||||||||||    
T  20647903 aattcaactaacaacaattcaa 20647882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 170 - 356
Target Start/End: Original strand, 41246919 - 41247105
Alignment:
Q  170 aatttatcaattcacccaattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagatagagta 269  Q
    |||| ||||||||| ||||||||||||||||||||| | |||||||||||| |||||||||||||||||||| ||||||||||||||||||| |||   |    
T  41246919 aattaatcaattcatccaattaagcacttttcatacaactaattgaaaattacaataagtgattatgatgaactctaacccccttaccttag-taggtca 41247017  T
Q  270 a--tccctagcttaggcttcaattttgctcctagctctcatccaatccttgattcttcaagttcctcttctctctaacccttttctcct 356  Q
    |  || ||||||||||||||||||||||||||| ||||  ||| | || | |||||||||| |||||||||||||||||||||| ||||    
T  41247018 atctctctagcttaggcttcaattttgctcctacctcttctccgaacccttattcttcaag-tcctcttctctctaacccttttttcct 41247105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 229 - 361
Target Start/End: Complemental strand, 39446691 - 39446558
Alignment:
Q  229 tgattatgatgaattctaacccccttaccttagatagagtaat-ccctagcttaggcttcaattttgctcctagctctcatccaatccttgattcttcaa 327  Q
    ||||||||||||||||||||||||||||||||| |||| |||| |||||||| | |||||||||| |||| |||||||| |||||||||||| |||||||    
T  39446691 tgattatgatgaattctaacccccttaccttagttagattaattccctagctcaagcttcaatttagctcatagctctcttccaatccttgaatcttcaa 39446592  T
Q  328 gttcctcttctctctaacccttttctcctttgct 361  Q
    |||||||||||||||||||||||||  |||||||    
T  39446591 gttcctcttctctctaacccttttcctctttgct 39446558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 168 - 356
Target Start/End: Complemental strand, 22234791 - 22234604
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagatagag 267  Q
    |||||| |||||||||  ||||||||||||| |||||| |||||||||||||| ||| |||||||||||||||||||||||||||||||||||| ||||     
T  22234791 acaattaatcaattcattcaattaagcacttatcatacaaataattgaaaattacaa-aagtgattatgatgaattctaacccccttaccttag-tagat 22234694  T
Q  268 taa--tccctagcttaggcttcaattttgctcctagctc-tcatccaatccttgattcttcaagttcctcttctctctaacccttttctcct 356  Q
    |||  |||| | ||||| ||||||||||||||||||||| ||  |||| ||||||||||||||| ||||||||||||| ||| |||||||||    
T  22234693 taatctcccaaacttagtcttcaattttgctcctagctcttctcccaacccttgattcttcaag-tcctcttctctct-accattttctcct 22234604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 168 - 356
Target Start/End: Original strand, 25122702 - 25122888
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagatagag 267  Q
    |||||| ||||||||| ||||||||||||||||||||| ||||||||||||||  ||||| ||||||||||||||||||||||||||||||||| |||      
T  25122702 acaattaatcaattcatccaattaagcacttttcatacaaataattgaaaattataataa-tgattatgatgaattctaacccccttaccttag-taggt 25122799  T
Q  268 taa--tccctagcttaggcttcaattttgctcctagctc-tcatccaatccttgattcttcaagttcctcttctctctaacccttttctcct 356  Q
    |||  || ||||||||||||||||||||||||||||||| ||  |||| ||||| ||||||||| |||| |||||||| |||||||||||||    
T  25122800 taatctctctagcttaggcttcaattttgctcctagctcttctcccaacccttg-ttcttcaag-tccttttctctct-acccttttctcct 25122888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 168 - 350
Target Start/End: Original strand, 22981531 - 22981713
Alignment:
Q  168 acaatttatcaattcacccaattaagcactt-ttcataccaataattgaaaa-ttgcaataagtgattatgatgaattctaacccccttaccttagatag 265  Q
    |||||| ||||||| |||||||||||||||| ||||||| ||  |||||||| ||||||||  ||||||||||||||||||||||||||||||||| |||    
T  22981531 acaattaatcaatt-acccaattaagcacttattcatacaaa--attgaaaaattgcaatatatgattatgatgaattctaacccccttaccttagttag 22981627  T
Q  266 agtaat-ccctagcttaggcttcaattttgctcctagctctcatccaatccttgattcttcaagttcctcttctctctaacccttt 350  Q
    | |||| ||| |||| | |||||||||| |||||||| |||| ||||||| |||| || |||||||||||||||||||||||||||    
T  22981628 attaattccccagctcaagcttcaatttagctcctagatctcttccaatctttgaatcatcaagttcctcttctctctaacccttt 22981713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 30 - 161
Target Start/End: Original strand, 21681075 - 21681207
Alignment:
Q  30 aattgatcatgaaacttatcacaattcaataacaacaaagcataa-ttcaccaattgagcatattttcaacatataccaacttctcatactttgaacatg 128  Q
    |||||||||||||||| |||||||||||| ||||||||||||||| || |||||||||||||||||||||||||||||    ||||||||||| ||||||    
T  21681075 aattgatcatgaaactaatcacaattcaacaacaacaaagcataatttaaccaattgagcatattttcaacatatacccttctctcatactttaaacatg 21681174  T
Q  129 tgattcaactaacaacaattcaattatccataa 161  Q
      ||||||||||||| |||||||||||||||||    
T  21681175 aaattcaactaacaataattcaattatccataa 21681207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 30 - 170
Target Start/End: Original strand, 37611741 - 37611881
Alignment:
Q  30 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcat--actttgaacat 127  Q
    ||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||||||||||||||||| ||||| | || ||||  |||||||||||    
T  37611741 aattgatcatgaaacttttcacaattcatcaacaacaaagcataattcaccaattgagcatattttcaacacataccca-ttttcatacactttgaacat 37611839  T
Q  128 gtgattcaactaacaacaattcaattatccataacttcataca 170  Q
    || ||||||||||| |||||||||||||  |||||||||||||    
T  37611840 gtaattcaactaac-acaattcaattatttataacttcataca 37611881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 16 - 170
Target Start/End: Original strand, 41246718 - 41246870
Alignment:
Q  16 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctca 115  Q
    |||||||||| || ||||||||||||||||||||||||||||  |||||||| |||||||||||||||| |||||| ||||| |||||||| | || ||     
T  41246718 caacaacaac-atcaattgatcatgaaacttatcacaattcatcaacaacaatgcataattcaccaattaagcata-tttcatcatatacccatttttcc 41246815  T
Q  116 tactttgaacatgtgattcaactaacaacaattcaattatccataacttcataca 170  Q
    |||||| ||||||| ||||||| |||||||||| |||||| ||||||||||||||    
T  41246816 tacttttaacatgtaattcaaccaacaacaatttaattattcataacttcataca 41246870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 185 - 356
Target Start/End: Original strand, 20481881 - 20482051
Alignment:
Q  185 ccaattaagcactt-ttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagatagagtaa--tccctagctta 281  Q
    |||||||||||||| ||||||| | |||||||||||| ||| |||||||||||||||||| ||||||||||||||||| |||  |||  |||||||||||    
T  20481881 ccaattaagcacttattcatac-attaattgaaaattacaa-aagtgattatgatgaattttaacccccttaccttag-taggttaatctccctagctta 20481977  T
Q  282 ggcttcaattttgctcctagctc-tcatccaatccttgattcttcaagttcctcttctctctaacccttttctcct 356  Q
    ||||||||||||||||||| ||| ||  |||| ||||||||||||||| ||||||||||||| |||||||||||||    
T  20481978 ggcttcaattttgctcctacctcttctcccaacccttgattcttcaag-tcctcttctctct-acccttttctcct 20482051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 16 - 166
Target Start/End: Complemental strand, 39446953 - 39446804
Alignment:
Q  16 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattc-accaattgagcatattttcaacatataccaacttc-t 113  Q
    |||||||||| || ||||||||||||| ||||||||||||||| ||||||| |||||||||| ||||||| |||||| |||||||||||| | ||||| |    
T  39446953 caacaacaac-atcaattgatcatgaatcttatcacaattcaacaacaacatagcataattcaaccaatttagcata-tttcaacatataac-acttctt 39446857  T
Q  114 catactttgaacatgtgattcaactaacaacaattcaattatccataacttca 166  Q
    |||||||| ||||||  |||| ||||||||||||||||||||||| |||||||    
T  39446856 catactttaaacatgaaattccactaacaacaattcaattatccacaacttca 39446804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 242 - 350
Target Start/End: Complemental strand, 20653946 - 20653837
Alignment:
Q  242 ttctaacccccttaccttagatagagtaatc--cctagcttaggcttcaattttgctcctagctctcatccaatccttgattcttcaagttcctcttctc 339  Q
    |||||||||||||||||||| |||| |||||  ||||||||||||||||||||||||||||||||||  | |||||||||||||||||| ||||||||||    
T  20653946 ttctaacccccttaccttagttagattaatctccctagcttaggcttcaattttgctcctagctctctcctaatccttgattcttcaag-tcctcttctc 20653848  T
Q  340 tctaacccttt 350  Q
    ||||| |||||    
T  20653847 tctaaaccttt 20653837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 35 - 167
Target Start/End: Original strand, 22981351 - 22981483
Alignment:
Q  35 atcatgaaacttatcacaattcaataacaacaaagcataattcaccaa-ttgagcatattttcaacatataccaacttctcatactttgaacatgtgatt 133  Q
    |||||||| ||||||||||||||| ||||||| ||||||||||| ||| ||||||||| |||||||||||||||  |||||||||||||||||||  |||    
T  22981351 atcatgaatcttatcacaattcaacaacaacatagcataattcaacaatttgagcata-tttcaacatataccactttctcatactttgaacatgaaatt 22981449  T
Q  134 caactaacaacaattcaattatccataacttcat 167  Q
       |||||||||||||||||||| | ||||||||    
T  22981450 tctctaacaacaattcaattatcaacaacttcat 22981483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 16 - 167
Target Start/End: Original strand, 38533709 - 38533859
Alignment:
Q  16 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaatt-gagcatattttcaacatataccaacttctc 114  Q
    |||||||||| || |||||| |||||| || |||||||||||| ||||||| |||||||||||  |||| |||||||||| ||||||||||||  |||||    
T  38533709 caacaacaac-atcaattgaacatgaatctcatcacaattcaacaacaacatagcataattcaataatttgagcatattt-caacatataccattttctc 38533806  T
Q  115 atactttgaacatgtgattcaactaacaacaattcaattatccataacttcat 167  Q
    |||||||||||||| ||||   |||||||||||||||||||| | ||||||||    
T  38533807 atactttgaacatgagatttctctaacaacaattcaattatcaacaacttcat 38533859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 30 - 170
Target Start/End: Complemental strand, 22234977 - 22234838
Alignment:
Q  30 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcat--actttgaacat 127  Q
    ||||||||||||||| ||||||||||||  |||||||| |||||||||||||||||||||||||||| ||| ||||| | || ||||  ||||||| |||    
T  22234977 aattgatcatgaaacatatcacaattcatcaacaacaatgcataattcaccaattgagcatattttc-acacataccca-ttttcatacactttgagcat 22234880  T
Q  128 gtgattcaactaacaacaattcaattatccataacttcataca 170  Q
    || ||||||||||| |||||| |||||| ||||||||||||||    
T  22234879 gtaattcaactaac-acaattaaattattcataacttcataca 22234838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 30 - 170
Target Start/End: Complemental strand, 19993228 - 19993089
Alignment:
Q  30 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcat--actttgaacat 127  Q
    ||||||| |||||| |||||||||||||  |||||||| |||||||||||||||||||||||||||| ||| ||||| | || ||||  ||||||||||     
T  19993228 aattgatgatgaaatttatcacaattcatcaacaacaatgcataattcaccaattgagcatattttc-acacataccca-ttttcatacactttgaacaa 19993131  T
Q  128 gtgattcaactaacaacaattcaattatccataacttcataca 170  Q
    || ||||||||||| ||||||||||||| ||||||||| ||||    
T  19993130 gtaattcaactaac-acaattcaattattcataacttcgtaca 19993089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 224 - 351
Target Start/End: Original strand, 38533967 - 38534095
Alignment:
Q  224 ataagtgattatgatgaattctaacccccttaccttagatagagtaatc-cctagcttaggcttcaattttgctcctagctctcatccaatccttgattc 322  Q
    |||| |||||||||||||||||||||||||||||||||  | |  |||  |||||||   |||||| ||| ||||||||||||| ||||||| |||| ||    
T  38533967 ataaatgattatgatgaattctaacccccttaccttagtcaaatcaatttcctagctctagcttcactttagctcctagctctcttccaatctttgaatc 38534066  T
Q  323 ttcaagttcctcttctctctaaccctttt 351  Q
    ||||||||| |||||||||||||||||||    
T  38534067 ttcaagttcttcttctctctaaccctttt 38534095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 167
Target Start/End: Original strand, 23837258 - 23837408
Alignment:
Q  16 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaatt-gagcatattttcaacatataccaacttctc 114  Q
    |||||||||| || |||||| |||||  |||| |||||||||| ||||||| ||||||||||| ||||| ||||||| || ||||||||| ||  |||||    
T  23837258 caacaacaac-atcaattgaacatgactcttaccacaattcaacaacaacatagcataattcaacaatttgagcatagtt-caacatatatcactttctc 23837355  T
Q  115 atactttgaacatgtgattcaactaacaacaattcaattatccataacttcat 167  Q
    ||||||||||||||  |||  | ||||||||||||||||||| | ||||||||    
T  23837356 atactttgaacatgaaatttcaataacaacaattcaattatcaacaacttcat 23837408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 168 - 300
Target Start/End: Complemental strand, 7000611 - 7000479
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagata--g 265  Q
    |||||| ||||||||| || ||||||||||| |||||| ||||||||||||||  || ||||||||||||||||  ||||||||||||| |||||||  |    
T  7000611 acaattaatcaattcatcctattaagcacttatcatacaaataattgaaaatt-aaaaaagtgattatgatgaaaactaacccccttactttagataagg 7000513  T
Q  266 agtaatccctagcttaggcttcaattttgctccta 300  Q
    | ||| ||| | ||||||||||||||| |||||||    
T  7000512 attaa-cccaaacttaggcttcaatttagctccta 7000479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 16 - 167
Target Start/End: Complemental strand, 21198339 - 21198189
Alignment:
Q  16 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaatt-gagcatattttcaacatataccaacttctc 114  Q
    |||||||||| || |||||| |||||  |||| |||||||||| ||||||| | ||||||||| ||||| ||||||| || ||||||||| ||  |||||    
T  21198339 caacaacaac-atcaattgaacatgattcttaccacaattcaacaacaacataacataattcaacaatttgagcataatt-caacatatatcactttctc 21198242  T
Q  115 atactttgaacatgtgattcaactaacaacaattcaattatccataacttcat 167  Q
    ||||||||||||||  |||  || |||||||||||||||||| | ||||||||    
T  21198241 atactttgaacatgaaatttcaccaacaacaattcaattatctacaacttcat 21198189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 229 - 349
Target Start/End: Complemental strand, 31194248 - 31194127
Alignment:
Q  229 tgattatgatgaattctaacccccttaccttagatagagtaa-tccctagcttaggcttcaattttgctcctagctctcatccaatccttgattcttcaa 327  Q
    |||||||||||||  |||||||||||||||||| |||| ||| || |||||||| |||||| |||||||||||    || || |||| |||| || ||||    
T  31194248 tgattatgatgaaaactaacccccttaccttagttagattaattcactagcttaagcttcacttttgctcctatgattcttcaaatctttgaatcctcaa 31194149  T
Q  328 gttcctcttctctctaaccctt 349  Q
    |||| |||||||||||||||||    
T  31194148 gttcttcttctctctaaccctt 31194127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 16 - 156
Target Start/End: Original strand, 26011554 - 26011693
Alignment:
Q  16 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaatt-gagcatattttcaacatataccaacttctc 114  Q
    |||||||||| || |||| | |||||| || |||||||||||| ||||||| |||| |||||| || || ||||||| || ||||||||| ||  ||| |    
T  26011554 caacaacaac-atcaattcaacatgaatctcatcacaattcaacaacaacatagcacaattcaacatttagagcataatt-caacatataacactttcac 26011651  T
Q  115 atactttgaacatgtgattcaactaacaacaattcaattatc 156  Q
    ||||||||||||||| |||  || ||||||||||||||||||    
T  26011652 atactttgaacatgtaatttcaccaacaacaattcaattatc 26011693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 274517 - 274577
Alignment:
Q  31 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 91  Q
    |||||||||||||||||||||||||||  |||||| | |||||||||||||||||| ||||    
T  274517 attgatcatgaaacttatcacaattcatcaacaaccatgcataattcaccaattgaacata 274577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 641332 - 641272
Alignment:
Q  31 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 91  Q
    |||||||||||||||||||||||||||  |||||| | |||||||||||||||||| ||||    
T  641332 attgatcatgaaacttatcacaattcatcaacaaccatgcataattcaccaattgaacata 641272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 827138 - 827078
Alignment:
Q  31 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 91  Q
    |||||||||||||||||||||||||||  |||||| | |||||||||||||||||| ||||    
T  827138 attgatcatgaaacttatcacaattcatcaacaaccatgcataattcaccaattgaacata 827078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 16039062 - 16039002
Alignment:
Q  31 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 91  Q
    |||||||||||||||||||||||||||  |||||| | ||||||||||| |||||||||||    
T  16039062 attgatcatgaaacttatcacaattcatcaacaaccatgcataattcactaattgagcata 16039002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 41506990 - 41506930
Alignment:
Q  31 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 91  Q
    |||||||||||||| ||||||||||||  |||||| | |||||||||||||||||||||||    
T  41506990 attgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 41506930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 186 - 261
Target Start/End: Original strand, 15970098 - 15970174
Alignment:
Q  186 caattaagcactt-ttcataccaataattgaaaa-ttgcaataagtgattatgatgaattctaacccccttaccttag 261  Q
    |||||||||| || ||||||| |||||||||||| ||||| ||| |||||||||||||||| ||||||||||||||||    
T  15970098 caattaagcatttattcatac-aataattgaaaaattgcactaaatgattatgatgaattccaacccccttaccttag 15970174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 39115349 - 39115409
Alignment:
Q  31 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 91  Q
    |||||||||||||| |||||| |||||  |||||| | |||||||||||||||||||||||    
T  39115349 attgatcatgaaacatatcacgattcatcaacaactatgcataattcaccaattgagcata 39115409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 16 - 156
Target Start/End: Original strand, 5854674 - 5854813
Alignment:
Q  16 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaatt-gagcatattttcaacatataccaacttctc 114  Q
    |||||||||| || |||||| |||||| || |||||||||||| ||||||| |||| || ||| || || ||||||| || ||||||||| ||  |||      
T  5854674 caacaacaac-atcaattgaacatgaatctcatcacaattcaacaacaacatagcacaactcaacatttagagcataatt-caacatataacactttcat 5854771  T
Q  115 atactttgaacatgtgattcaactaacaacaattcaattatc 156  Q
    ||||||||||||||  |||  || ||||||||||||||||||    
T  5854772 atactttgaacatgctatttcaccaacaacaattcaattatc 5854813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 94 - 167
Target Start/End: Original strand, 17285341 - 17285414
Alignment:
Q  94 ttcaacatataccaacttctcatactttgaacatgtgattcaactaacaacaattcaattatccataacttcat 167  Q
    ||||||||||| ||  |||||||||||||||||||  |||  || |||||||||||||||||| | ||||||||    
T  17285341 ttcaacatatatcactttctcatactttgaacatgaaatttcaccaacaacaattcaattatcaacaacttcat 17285414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 229 - 301
Target Start/End: Complemental strand, 22735772 - 22735699
Alignment:
Q  229 tgattatgatgaattctaacccccttaccttagatagagtaa-tccctagcttaggcttcaattttgctcctag 301  Q
    ||||||||||||||| ||||||||||||||||| ||||  || ||||||||| | |||||| ||| ||||||||    
T  22735772 tgattatgatgaattttaacccccttaccttagttagataaattccctagctcaagcttcactttagctcctag 22735699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 24717043 - 24716983
Alignment:
Q  31 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 91  Q
    ||||| ||||||||  |||||||||||  |||||| | |||||||||||||||||||||||    
T  24717043 attgaacatgaaacaaatcacaattcatcaacaaccatgcataattcaccaattgagcata 24716983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 319 - 349
Target Start/End: Original strand, 274859 - 274889
Alignment:
Q  319 attcttcaagttcctcttctctctaaccctt 349  Q
    |||||||||||||||||||||||||||||||    
T  274859 attcttcaagttcctcttctctctaaccctt 274889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 319 - 349
Target Start/End: Complemental strand, 640990 - 640960
Alignment:
Q  319 attcttcaagttcctcttctctctaaccctt 349  Q
    |||||||||||||||||||||||||||||||    
T  640990 attcttcaagttcctcttctctctaaccctt 640960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 319 - 349
Target Start/End: Complemental strand, 826796 - 826766
Alignment:
Q  319 attcttcaagttcctcttctctctaaccctt 349  Q
    |||||||||||||||||||||||||||||||    
T  826796 attcttcaagttcctcttctctctaaccctt 826766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 260
Target Start/End: Complemental strand, 23226050 - 23225973
Alignment:
Q  185 ccaattaagcactttt-cataccaataattgaaaa-ttgcaataag-tgattatgatgaattctaacccccttacctta 260  Q
    |||||||| ||||||| ||||| |||||||||||| ||||| |||  ||||||||||||||||||||||| ||||||||    
T  23226050 ccaattaaacactttttcatac-aataattgaaaaattgcactaaaatgattatgatgaattctaacccctttacctta 23225973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 319 - 349
Target Start/End: Complemental strand, 24716701 - 24716671
Alignment:
Q  319 attcttcaagttcctcttctctctaaccctt 349  Q
    |||||||||||||||||||||||||||||||    
T  24716701 attcttcaagttcctcttctctctaaccctt 24716671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 319 - 349
Target Start/End: Original strand, 29760367 - 29760397
Alignment:
Q  319 attcttcaagttcctcttctctctaaccctt 349  Q
    |||||||||||||||||||||||||||||||    
T  29760367 attcttcaagttcctcttctctctaaccctt 29760397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 156
Target Start/End: Original strand, 15933358 - 15933497
Alignment:
Q  16 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaatt-gagcatattttcaacatataccaacttctc 114  Q
    |||||||||| || |||||| |||||| || |||| ||||||| ||||||| | || |||||| || || ||||||| || |||||| || ||  ||| |    
T  15933358 caacaacaac-atcaattgaacatgaatctcatcataattcaacaacaacataacacaattcaacatttagagcataatt-caacatttaacactttcac 15933455  T
Q  115 atactttgaacatgtgattcaactaacaacaattcaattatc 156  Q
    ||||||||||||||  |||  || ||||||||||||||||||    
T  15933456 atactttgaacatgcaatttcaccaacaacaattcaattatc 15933497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 349
Target Start/End: Complemental strand, 24385683 - 24385560
Alignment:
Q  229 tgattatgatgaattctaacccccttaccttagat--agagtaatccctagcttaggcttcaattttgctcct-agctctcatccaatccttgattcttc 325  Q
    |||||||||| ||  ||||||||||||||||||||  ||| ||||||| | ||||||||||| ||| |||||| ||||| | |||||| |||||||||||    
T  24385683 tgattatgataaagactaacccccttaccttagatgaagattaatccc-aacttaggcttcactttagctcctaagctcac-tccaat-cttgattcttc 24385587  T
Q  326 aag---ttcctcttctctctaaccctt 349  Q
    |||   | ||||||||||| |||||||    
T  24385586 aagctctccctcttctctccaaccctt 24385560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 349
Target Start/End: Complemental strand, 24928747 - 24928624
Alignment:
Q  229 tgattatgatgaattctaacccccttaccttagat--agagtaatccctagcttaggcttcaattttgctcct-agctctcatccaatccttgattcttc 325  Q
    |||||||||| ||  |||||||| |||||||||||  ||| ||||||| | ||||| ||||||||| |||||| ||||| | |||||| |||||||||||    
T  24928747 tgattatgataaagactaaccccattaccttagataaagattaatccc-aacttagacttcaatttagctcctaagctcac-tccaat-cttgattcttc 24928651  T
Q  326 aag---ttcctcttctctctaaccctt 349  Q
    |||   | |||||||||||||||||||    
T  24928650 aagatctccctcttctctctaaccctt 24928624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 170
Target Start/End: Original strand, 25122618 - 25122655
Alignment:
Q  133 tcaactaacaacaattcaattatccataacttcataca 170  Q
    ||||||| ||||||||||||||| ||||||||||||||    
T  25122618 tcaactagcaacaattcaattattcataacttcataca 25122655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 156
Target Start/End: Original strand, 29306477 - 29306616
Alignment:
Q  16 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaa-ttgagcatattttcaacatataccaacttctc 114  Q
    |||||||||| || |||| | |||||| || |||||||||||| ||||||| |||| |||||| ||| |||||||||  ||||||||||| ||  ||| |    
T  29306477 caacaacaac-atcaattaaacatgaatctcatcacaattcaacaacaacatagcacaattcaacaatttgagcata-attcaacatatatcattttcac 29306574  T
Q  115 atactttgaacatgtgattcaactaacaacaattcaattatc 156  Q
    | |||||||||||   | |  || ||||||||||||||||||    
T  29306575 aaactttgaacatacaaattcaccaacaacaattcaattatc 29306616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 315 - 351
Target Start/End: Complemental strand, 21191444 - 21191408
Alignment:
Q  315 cttgattcttcaagttcctcttctctctaaccctttt 351  Q
    ||||| |||||||| ||||||||||||||||||||||    
T  21191444 cttgaatcttcaagctcctcttctctctaaccctttt 21191408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 315 - 351
Target Start/End: Complemental strand, 21197990 - 21197954
Alignment:
Q  315 cttgattcttcaagttcctcttctctctaaccctttt 351  Q
    ||||| |||||||| ||||||||||||||||||||||    
T  21197990 cttgaatcttcaagctcctcttctctctaaccctttt 21197954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 125; Significance: 3e-64; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 168 - 356
Target Start/End: Original strand, 38558 - 38748
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagatagag 267  Q
    |||||| || |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||      
T  38558 acaattaattaattcacccaattaagcacttttcatacaaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagttaggt 38657  T
Q  268 taa--tccctagcttaggcttcaattttgctcctagctc-tcatccaatccttgattcttcaagttcctcttctctctaacccttttctcct 356  Q
    |||  || ||||||||||||||||||||||||||||||| ||  |||| ||||||||||||||| |||||||||||||||||||||||||||    
T  38658 taatctctctagcttaggcttcaattttgctcctagctcttctcccaacccttgattcttcaag-tcctcttctctctaacccttttctcct 38748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 30 - 168
Target Start/End: Original strand, 38371 - 38509
Alignment:
Q  30 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatgt 129  Q
    ||||||||||||||||||||||||||||  |||||||| ||||||||| |||||||||||||||||||||||||||| | ||||| | ||||||||||||    
T  38371 aattgatcatgaaacttatcacaattcatcaacaacaatgcataattcgccaattgagcatattttcaacatatacccatttctcttcctttgaacatgt 38470  T
Q  130 gattcaactaacaacaattcaattatccataacttcata 168  Q
     ||||||| ||||| ||||||||||| ||||| ||||||    
T  38471 aattcaaccaacaaaaattcaattattcataaattcata 38509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 125; Significance: 3e-64; HSPs: 61)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 30 - 170
Target Start/End: Original strand, 16732242 - 16732382
Alignment:
Q  30 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatgt 129  Q
    ||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16732242 aattgatcatgaaacttatcacaattcatcaacaacatagcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatgt 16732341  T
Q  130 gattcaactaacaacaattcaattatccataacttcataca 170  Q
     ||||||||||||||||||||||||||||||||||||||||    
T  16732342 aattcaactaacaacaattcaattatccataacttcataca 16732382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 168 - 349
Target Start/End: Complemental strand, 23269921 - 23269738
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagatagag 267  Q
    |||||| ||||||||| |||||||| |||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||      
T  23269921 acaattaatcaattcatccaattaaacacttttcatacaaataattgaaaattacaataagtgattatgatgaattctaacccccttaccttagttaggt 23269822  T
Q  268 taa--tccctagcttaggcttcaattttgctcctagctctcatccaatccttgattcttcaagttcctcttctctctaaccctt 349  Q
    |||  || |||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||| ||||||    
T  23269821 taatctctctagcttaggcttcaattttgctcctagctcaactccaatccttgattcttcaagttcctcttctctctgaccctt 23269738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 31 - 170
Target Start/End: Complemental strand, 12837373 - 12837234
Alignment:
Q  31 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatgtg 130  Q
    ||||| ||||||||||||||||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||     
T  12837373 attgaccatgaaacttatcacaatttaacaacaacatagcataattcaccaattgagcatattttcaacatataccaatttctcatactttgaacatgta 12837274  T
Q  131 attcaactaacaacaattcaattatccataacttcataca 170  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  12837273 attcaactaacaacaattcaattatccataacttcataca 12837234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 168 - 356
Target Start/End: Complemental strand, 819918 - 819729
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagatagag 267  Q
    |||||| ||||||||||||||||||||| ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||      
T  819918 acaattaatcaattcacccaattaagcatttttcatacaaataattaaaaattgcaataagtgattatgatgaattctaacccccttaccttagttaggt 819819  T
Q  268 taa--tccctagcttaggcttcaattttgctcctagctc-tcatccaatccttgattcttcaagttcctcttctctctaacccttttctcct 356  Q
    |||  || |||||||||||||||||||||||| |||||| ||  |||| ||||||||||||||| ||||||||||||| |||||||||||||    
T  819818 taatctctctagcttaggcttcaattttgctcatagctcttctcccaacccttgattcttcaag-tcctcttctctct-acccttttctcct 819729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 168 - 356
Target Start/End: Complemental strand, 20813534 - 20813345
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagatagag 267  Q
    |||||| ||||||||||||||||||||| ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||      
T  20813534 acaattaatcaattcacccaattaagcatttttcatacaaataatttaaaattgcaataagtgattatgatgaattctaacccccttaccttagttaggt 20813435  T
Q  268 taa--tccctagcttaggcttcaattttgctcctagctc-tcatccaatccttgattcttcaagttcctcttctctctaacccttttctcct 356  Q
    |||  || ||||||||||||||||||| ||||||||||| ||  |||| ||||||||||||||| ||||||||||||| |||||||||||||    
T  20813434 taatctctctagcttaggcttcaatttcgctcctagctcttctcccaacccttgattcttcaag-tcctcttctctct-acccttttctcct 20813345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 168 - 356
Target Start/End: Original strand, 44056174 - 44056364
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagatagag 267  Q
    |||||| ||||||||| ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||      
T  44056174 acaattaatcaattcatccaattaagcacttttcatacaaataattgaaaattacaataagtgattatgatgaattctaacccccttaccttagttaggt 44056273  T
Q  268 taa--tccctagcttaggcttcaattttgctcctagctc-tcatccaatccttgattcttcaagttcctcttctctctaacccttttctcct 356  Q
    |||  || |||||||||| |||||||||||||||||||| ||  | || ||||||||||||||  |||||||||||||||||||||||||||    
T  44056274 taatctctctagcttaggtttcaattttgctcctagctcttctactaacccttgattcttcaa-atcctcttctctctaacccttttctcct 44056364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 168 - 350
Target Start/End: Complemental strand, 52265495 - 52265311
Alignment:
Q  168 acaatttatcaattcacccaattaagcactt-ttcataccaataattgaaaa-ttgcaataagtgattatgatgaattctaacccccttaccttagatag 265  Q
    |||||| ||||||| |||||||||| ||||| ||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||  ||    
T  52265495 acaattaatcaatt-acccaattaaacacttattcatac-aataattgaaaaattgcaataaatgattatgatgaattctaacccccttaccttagtcag 52265398  T
Q  266 agtaatc--cctagcttaggcttcaattttgctcctagctctcatccaatccttgattcttcaagttcctcttctctctaacccttt 350  Q
    | |||||  |||||||||||||||||||| ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||    
T  52265397 attaatctccctagcttaggcttcaatttagctcctagctctcttccaatctttgattcttcaagttcctcttctctctaacccttt 52265311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 168 - 356
Target Start/End: Complemental strand, 12837187 - 12837000
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagatagag 267  Q
    |||||| ||||||||||||||||||||||||||||| | || |||||||||| ||||||||||||||||||||||||||||||||||||||||| |||      
T  12837187 acaattaatcaattcacccaattaagcacttttcattcaaa-aattgaaaatagcaataagtgattatgatgaattctaacccccttaccttag-taggt 12837090  T
Q  268 taa--tccctagcttaggcttcaattttgctcctagctc-tcatccaatccttgattcttcaagttcctcttctctctaacccttttctcct 356  Q
    |||  |||||||||||||||||||||||||||||||||| ||  |||| ||||||||||||||| ||||||||||||| |||||||||||||    
T  12837089 taatctccctagcttaggcttcaattttgctcctagctcttctcccaacccttgattcttcaag-tcctcttctctct-acccttttctcct 12837000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 168 - 356
Target Start/End: Original strand, 34395517 - 34395706
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagatagag 267  Q
    |||||| |||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||      
T  34395517 acaattaatcagttcacccaattaagcacttttcatacaaataattgaaaattgcaataagtgataatgatgaattctaacccccttaccttagttaggt 34395616  T
Q  268 taa--tccctagcttaggcttcaattttgctcctagctc-tcatccaatccttgattcttcaagttcctcttctctctaacccttttctcct 356  Q
    |||  || |||||||||||||||||||| |||||||||| ||  |||| ||||||||||||||| ||||||||||||| ||| |||||||||    
T  34395617 taatctctctagcttaggcttcaatttttctcctagctcttctcccaacccttgattcttcaag-tcctcttctctct-acctttttctcct 34395706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 168 - 353
Target Start/End: Complemental strand, 45458842 - 45458656
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagatagag 267  Q
    |||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||| ||| ||||||||||||| |||      
T  45458842 acaattaatcaattcacccaattaagcacttttcatacaaataattgaaaattgcaataaatgattatgatgaattataa-ccccttaccttagttaggt 45458744  T
Q  268 taatccc--tagcttaggcttcaattttgctcctagc-tctcatccaatccttgattcttcaagttcctcttctctctaacccttttct 353  Q
    ||||| |  |||||||| ||||||||||||||||||| | ||  |||| ||||||||||||||| ||||||||||||||||||||||||    
T  45458743 taatctctttagcttagacttcaattttgctcctagcttttctcccaacccttgattcttcaag-tcctcttctctctaacccttttct 45458656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 168 - 356
Target Start/End: Complemental strand, 8872459 - 8872272
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagatagag 267  Q
    |||||| ||||||||| |||||||||||||| |||||| |||||||||||||| ||| ||||||||||||||||||||||||||||||| |||| |||      
T  8872459 acaattaatcaattcatccaattaagcacttatcatacaaataattgaaaattacaa-aagtgattatgatgaattctaacccccttactttag-taggt 8872362  T
Q  268 taa--tccctagcttaggcttcaattttgctcctagctctcatcc-aatccttgattcttcaagttcctcttctctctaacccttttctcct 356  Q
    |||  |||||||||||||||||||||||||||||||||||  ||| || ||||||||||||||| ||||||||||||| |||||||||||||    
T  8872361 taatctccctagcttaggcttcaattttgctcctagctcttctcctaacccttgattcttcaag-tcctcttctctct-acccttttctcct 8872272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 168 - 356
Target Start/End: Original strand, 30458163 - 30458352
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagatagag 267  Q
    |||||| ||||||||| ||||||||||||||||||||| ||||||| |||||| |||||||| ||||||||||||||||||||||||||||||| |||      
T  30458163 acaattaatcaattcatccaattaagcacttttcatacaaataattcaaaattacaataagtaattatgatgaattctaacccccttaccttag-taggt 30458261  T
Q  268 taa--tccctagcttaggcttcaattttgctcctagctctcatc-caatccttgattcttcaagttcctcttctctctaacccttttctcct 356  Q
    |||  || |||||||||||||||||||||||||||| | |  || ||| ||| ||||||||||| |||||||||||||||||||||||||||    
T  30458262 taatctctctagcttaggcttcaattttgctcctagattttctctcaaccctcgattcttcaag-tcctcttctctctaacccttttctcct 30458352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 15 - 170
Target Start/End: Complemental strand, 45459043 - 45458889
Alignment:
Q  15 tcaacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctc 114  Q
    ||||||||||| || ||||| ||||||||||||||||||||||| |||| |||||||||||||||||||||| ||||| || ||||||||| ||||||||    
T  45459043 tcaacaacaac-atcaattggtcatgaaacttatcacaattcaacaacagcaaagcataattcaccaattgaacatatctttaacatatacaaacttctc 45458945  T
Q  115 atactttgaacatgtgattcaactaacaacaattcaattatccataacttcataca 170  Q
    ||| ||||| ||||| |||||||||||||||||||||||||| || ||||||||||    
T  45458944 atattttgagcatgtaattcaactaacaacaattcaattatctatcacttcataca 45458889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 178 - 356
Target Start/End: Complemental strand, 21959441 - 21959262
Alignment:
Q  178 aattcacccaattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagatagagtaa--tccct 275  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||  |||  || ||    
T  21959441 aattcacccaaataagcacttttcatacaaataattgaaaattgcaataaatgattatgatgaattctaacccccttaccttagttaggttaatctctct 21959342  T
Q  276 agcttaggcttcaattttgctcctagctc-tcatccaatccttgattcttcaagttcctcttctctctaacccttttctcct 356  Q
    ||||||| ||||||||||||||||||||| ||  ||||  |||||||||||||| || |||||||||| |||||||||||||    
T  21959341 agcttagacttcaattttgctcctagctcttctcccaactcttgattcttcaag-tcatcttctctct-acccttttctcct 21959262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 168 - 356
Target Start/End: Original strand, 44347086 - 44347272
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagatagag 267  Q
    |||||| ||||||||| |||||||||||||| |||||| |||||||||||||| ||| ||||||||||||||||||||||| |||||||||||| ||||     
T  44347086 acaattaatcaattcatccaattaagcacttatcatacaaataattgaaaattacaa-aagtgattatgatgaattctaactcccttaccttag-tagat 44347183  T
Q  268 taa--tccctagcttaggcttcaattttgctcctagctctc-atccaatccttgattcttcaagttcctcttctctctaacccttttctcct 356  Q
    |||  ||| |||||||||||||||||||||||||| ||||| |||  | |||||||||||||| |||||||||||||| |||||||||||||    
T  44347184 taatctccttagcttaggcttcaattttgctcctaactctctatc--acccttgattcttcaa-ttcctcttctctctgacccttttctcct 44347272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 168 - 361
Target Start/End: Complemental strand, 13809497 - 13809303
Alignment:
Q  168 acaatttatcaattcacccaattaagcactt-ttcataccaataattgaaaattg-caataagtgattatgatgaattctaacccccttaccttagatag 265  Q
    |||||| ||||||| || ||||||||||||| ||||||| |||||||||||| || |||||| ||||||||||||||||||||||||||||||||| |||    
T  13809497 acaattaatcaatt-actcaattaagcacttattcatac-aataattgaaaaatggcaataaatgattatgatgaattctaacccccttaccttagttag 13809400  T
Q  266 agtaat-ccctagcttaggcttcaattttgctcctagctctcatccaatccttgattcttcaagttcctcttctctctaacccttttctcctttgct 361  Q
    | |||| |||||||| | |||||||||| || ||||||||||  ||||||||||| |||||||||||||||||||||||| |||||||  |||||||    
T  13809399 attaattccctagctcaagcttcaatttagcccctagctctctcccaatccttgaatcttcaagttcctcttctctctaatccttttcctctttgct 13809303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 30 - 170
Target Start/End: Original strand, 30457976 - 30458116
Alignment:
Q  30 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatgt 129  Q
    ||||||||||||||||||||||||||||  |||||||| || ||||||||||||||||||||||||||||| ||||| | ||  ||||||||||||||||    
T  30457976 aattgatcatgaaacttatcacaattcatcaacaacaatgcgtaattcaccaattgagcatattttcaacacatacccattttacatactttgaacatgt 30458075  T
Q  130 gattcaactaacaacaattcaattatccataacttcataca 170  Q
     ||||||| |||||||||| |||||||||||||||||||||    
T  30458076 aattcaaccaacaacaatttaattatccataacttcataca 30458116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 168 - 350
Target Start/End: Original strand, 16732429 - 16732612
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataatt-gaaaattgcaataagtgattatgatgaattctaacccccttaccttagataga 266  Q
    |||||| |||||||||||||||||||||||||||||| || |||||  ||||||||||||| ||||||||||||||||||||| | ||||||||| ||||    
T  16732429 acaattaatcaattcacccaattaagcacttttcata-cactaattaaaaaattgcaataa-tgattatgatgaattctaacctctttaccttagttaga 16732526  T
Q  267 gtaa--tccctagcttaggcttcaattttgctcctagctctcatccaatccttgattcttcaagttcctcttctctctaacccttt 350  Q
     |||  ||||||| |||||||||||||||| ||||||||||| ||    ||||||||| |||||||||||||||||||||||||||    
T  16732527 ttaatctccctagtttaggcttcaattttggtcctagctctcttcacccccttgattcgtcaagttcctcttctctctaacccttt 16732612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 168 - 361
Target Start/End: Complemental strand, 18494315 - 18494119
Alignment:
Q  168 acaatttatcaattcacccaattaagcactt-ttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagataga 266  Q
    |||||| ||||||| || ||||||||||| | ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  18494315 acaattgatcaatt-acacaattaagcacctattcatacca-taattgaaaattgcaataaatgattatgatgaattctaacccccttaccttagttaga 18494218  T
Q  267 gtaa--tccctagcttaggcttcaattttgctcctagctctcatccaatccttgattcttcaagtt--cctcttctctctaacccttttctcctttgct 361  Q
     |||  ||||||||||| || ||||||| |||||||| | || |||||||||||||||||||||||  || ||||||| |||||||||||  |||||||    
T  18494217 ttaatctccctagcttaagcctcaatttagctcctagatttcttccaatccttgattcttcaagtttcccccttctctttaacccttttcctctttgct 18494119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 16 - 170
Target Start/End: Complemental strand, 21959650 - 21959498
Alignment:
Q  16 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctca 115  Q
    |||||||||| || ||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||||||||| ||||| | || |||    
T  21959650 caacaacaac-atcaattgatcatgaaacttatcacaattcatcaacaacatagcataattcaccaattgagcatattttcaacacatacccatttttca 21959552  T
Q  116 tactttgaacatgtgattcaactaacaacaattcaattatccataacttcataca 170  Q
    ||||||| | |||| ||||||  ||||||||||||| ||||||||||||||||||    
T  21959551 tactttg-agatgtaattcaatcaacaacaattcaaatatccataacttcataca 21959498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 168 - 350
Target Start/End: Complemental strand, 30232484 - 30232299
Alignment:
Q  168 acaatttatcaattcacccaattaagcactt-ttcataccaataattgaaaa--ttgcaataagtgattatgatgaattctaacccccttaccttagata 264  Q
    |||||| ||||||| || ||||||||||||| ||||||||| ||||||||||  |||||||||||||||||||||||||||||||| |||||||||| ||    
T  30232484 acaattaatcaatt-acacaattaagcacttattcatacca-taattgaaaaaattgcaataagtgattatgatgaattctaaccctcttaccttagtta 30232387  T
Q  265 gagtaa--tccctagcttaggcttcaattttgctcctagctc-tcatccaatccttgattcttcaagttcctcttctctctaacccttt 350  Q
    |  |||  || ||||||||| ||||||||||||||||||||| ||  |||||||||||||||||||| |||||||||||||||||||||    
T  30232386 ggttaatctctctagcttagacttcaattttgctcctagctcttctcccaatccttgattcttcaag-tcctcttctctctaacccttt 30232299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 168 - 356
Target Start/End: Complemental strand, 53704721 - 53704533
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagatagag 267  Q
    |||||| ||||||||| |||||||||||||| |||||| |||||||||||| |   | |||||||||||||||||||||||||||||||||||| |||      
T  53704721 acaattaatcaattcatccaattaagcacttatcatacaaataattgaaaaataacaaaagtgattatgatgaattctaacccccttaccttag-taggt 53704623  T
Q  268 taatccc--tagcttaggcttcaattttgctcctagctctcatccaatccttgattcttcaagttcctcttctctctaacccttttctcct 356  Q
    || ||||   |||||| ||||||||||| |||||||||     |||||||||||||||||||| |||||||||||||||||||||||||||    
T  53704622 tactcccctaagcttaagcttcaattttactcctagcttaaccccaatccttgattcttcaag-tcctcttctctctaacccttttctcct 53704533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 16 - 170
Target Start/End: Original strand, 34395317 - 34395470
Alignment:
Q  16 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctca 115  Q
    |||||||||| || ||||||||||||||||||||||||||||  |||||||| |||||||||||||||||||||||||||||||| ||||| | || |||    
T  34395317 caacaacaac-atcaattgatcatgaaacttatcacaattcatcaacaacaatgcataattcaccaattgagcatattttcaacacataccca-ttttca 34395414  T
Q  116 t--actttgaacatgtgattcaactaacaacaattcaattatccataacttcataca 170  Q
    |  ||||||||||||| ||||||||||| ||||||||||||| ||| ||||||||||    
T  34395415 tacactttgaacatgtaattcaactaac-acaattcaattattcattacttcataca 34395470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 30 - 170
Target Start/End: Original strand, 44055988 - 44056127
Alignment:
Q  30 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatgt 129  Q
    ||||||||||||||||||||||||||||  ||||| || |||||||||||||||||||||||||||||||| |||   | || |||||||||||||||||    
T  44055988 aattgatcatgaaacttatcacaattcatcaacaataatgcataattcaccaattgagcatattttcaacacatattcatttttcatactttgaacatgt 44056087  T
Q  130 gattcaactaacaacaattcaattatccataacttcataca 170  Q
     |||||||||||||||||||||  || ||||||||||||||    
T  44056088 aattcaactaacaacaattcaa-aattcataacttcataca 44056127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 168 - 350
Target Start/End: Original strand, 27961231 - 27961415
Alignment:
Q  168 acaatttatcaattcacccaattaagcactt-ttcataccaataattgaaaattgcaataag--tgattatgatgaattctaacccccttaccttagata 264  Q
    |||||| ||||||| || ||||||||||||| ||||||| || |||||||| || || |||   ||||||||||||||||||||||||||||||||| ||    
T  27961231 acaattaatcaatt-actcaattaagcacttattcatac-aacaattgaaatttacactaacaatgattatgatgaattctaacccccttaccttagtta 27961328  T
Q  265 gagtaat-ccctagcttaggcttcaattttgctcctagctctcatccaatccttgattcttcaagttcctcttctctctaacccttt 350  Q
    || |||| |||||||| | |||||| ||||||||||||||||| | |||||||||| |||||||||||| |||||||||||||||||    
T  27961329 gattaattccctagctcaagcttcacttttgctcctagctctctttcaatccttgaatcttcaagttccccttctctctaacccttt 27961415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 30 - 170
Target Start/End: Complemental strand, 53704907 - 53704768
Alignment:
Q  30 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatgt 129  Q
    ||||||||||||||| ||||||||||||  |||||| | |||||||||||||||||||||||||||| ||| ||||| | || |||||||||||||||      
T  53704907 aattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcatattttc-acacatacccatttttcatactttgaacatac 53704809  T
Q  130 gattcaactaacaacaattcaattatccataacttcataca 170  Q
     |||||||||||||||||||||| || ||||||||||||||    
T  53704808 aattcaactaacaacaattcaatcattcataacttcataca 53704768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 16 - 170
Target Start/End: Complemental strand, 23270121 - 23269968
Alignment:
Q  16 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctca 115  Q
    |||||||||| || |||||||||||| |||||||||||||||  |||||||| |||||||||| |||||||| |||||||||||| ||||| | || |||    
T  23270121 caacaacaac-atcaattgatcatgatacttatcacaattcatcaacaacaatgcataattcatcaattgagtatattttcaacacataccca-ttttca 23270024  T
Q  116 t--actttgaacatgtgattcaactaacaacaattcaattatccataacttcataca 170  Q
    |  ||||||||||||| ||||||||||| ||||||||||||| ||||||||||||||    
T  23270023 tacactttgaacatgtaattcaactaac-acaattcaattattcataacttcataca 23269968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 30 - 170
Target Start/End: Complemental strand, 8872645 - 8872506
Alignment:
Q  30 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatgt 129  Q
    ||||||||||||||| ||||||||||||  |||||||| |||||||||||||||||||||||||||| ||| ||||| | || |||||||||||||||      
T  8872645 aattgatcatgaaacatatcacaattcatcaacaacaacgcataattcaccaattgagcatattttc-acacatacccatttttcatactttgaacatac 8872547  T
Q  130 gattcaactaacaacaattcaattatccataacttcataca 170  Q
     ||||||||||||||| |||||| || |||| |||||||||    
T  8872546 aattcaactaacaacacttcaatcattcatagcttcataca 8872506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 229 - 352
Target Start/End: Original strand, 15045150 - 15045274
Alignment:
Q  229 tgattatgatgaattctaacccccttaccttagatagagtaat-ccctagcttaggcttcaattttgctcctagctctcatccaatccttgattcttcaa 327  Q
    ||||||||||||| ||||||||||||||||||| |||| |||| |||||||| | ||||||  || ||||||||||||| |||||||||||| |||||||    
T  15045150 tgattatgatgaaatctaacccccttaccttagttagattaattccctagctcaagcttcaccttagctcctagctctcttccaatccttgaatcttcaa 15045249  T
Q  328 gttcctcttctctctaacccttttc 352  Q
    |||||||| ||||||||||||||||    
T  15045250 gttcctctcctctctaacccttttc 15045274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 229 - 352
Target Start/End: Complemental strand, 15109274 - 15109150
Alignment:
Q  229 tgattatgatgaattctaacccccttaccttagatagagtaat-ccctagcttaggcttcaattttgctcctagctctcatccaatccttgattcttcaa 327  Q
    ||||||||||||| ||||||||||||||||||| |||| |||| |||||||| | ||||||  || ||||||||||||| |||||||||||| |||||||    
T  15109274 tgattatgatgaaatctaacccccttaccttagttagattaattccctagctcaagcttcaccttagctcctagctctcttccaatccttgaatcttcaa 15109175  T
Q  328 gttcctcttctctctaacccttttc 352  Q
    |||||||| ||||||||||||||||    
T  15109174 gttcctctcctctctaacccttttc 15109150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 30 - 170
Target Start/End: Complemental strand, 55376771 - 55376632
Alignment:
Q  30 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatgt 129  Q
    ||||||||||||||||||||||||||||  |||||||| | ||||||||||||||||| |||||||| ||| ||||| | || |||||||| ||||||      
T  55376771 aattgatcatgaaacttatcacaattcatcaacaacaatgtataattcaccaattgagtatattttc-acacatacccatttttcatacttagaacatac 55376673  T
Q  130 gattcaactaacaacaattcaattatccataacttcataca 170  Q
     |||||||||||||||||||||| || ||||||||||||||    
T  55376672 aattcaactaacaacaattcaatcattcataacttcataca 55376632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 185 - 356
Target Start/End: Complemental strand, 53907678 - 53907508
Alignment:
Q  185 ccaattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagatagagtaatc-cct-agcttag 282  Q
    |||||||||||||| |||||| |||||||||||| | ||| |||||||||||||||||||||||||||||||||||| |||  ||||| ||| ||||||     
T  53907678 ccaattaagcacttatcatacaaataattgaaaactacaa-aagtgattatgatgaattctaacccccttaccttag-taggttaatctcctaagcttaa 53907581  T
Q  283 gcttcaattttgctcctagctctcatccaatccttgattcttcaagttcctcttctctctaacccttttctcct 356  Q
    ||||||||||||||| |||||     |||||||||||||||||||| ||||| | ||||||||| |||||||||    
T  53907580 gcttcaattttgctcatagcttaaccccaatccttgattcttcaag-tcctcctttctctaaccattttctcct 53907508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 32 - 170
Target Start/End: Original strand, 44346902 - 44347039
Alignment:
Q  32 ttgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaactt-ctcatactttgaacatgtg 130  Q
    ||||||||||||| ||||||||||||  |||||||| | ||||||||||||||||||||||||||| || ||||| | || || | |||||||||||||     
T  44346902 ttgatcatgaaacatatcacaattcatgaacaacaatgtataattcaccaattgagcatattttca-cacatacccattttcttacactttgaacatgta 44347000  T
Q  131 attcaactaacaacaattcaattatccataacttcataca 170  Q
    |||||||||||| |||||||||||| ||||||||||||||    
T  44347001 attcaactaaca-caattcaattattcataacttcataca 44347039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 16 - 167
Target Start/End: Original strand, 27961031 - 27961181
Alignment:
Q  16 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattca-ccaattgagcatattttcaacatataccaacttc-t 113  Q
    |||||||||| || ||||||||||||| ||||| ||||||||| ||||| | | ||||||||| |||||| ||||||||| ||||||||||| ||||| |    
T  27961031 caacaacaac-atcaattgatcatgaatcttataacaattcaacaacaatataacataattcaaccaatttagcatattt-caacatatacc-acttctt 27961127  T
Q  114 catactttgaacatgtgattcaactaacaacaattcaattatccataacttcat 167  Q
    |||||||||||||||  |||| |||||||||||||||||||| |||||||||||    
T  27961128 catactttgaacatgaaattccactaacaacaattcaattattcataacttcat 27961181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 229 - 361
Target Start/End: Complemental strand, 40885490 - 40885356
Alignment:
Q  229 tgattatgatgaattctaacccccttaccttagata--gagtaatccctagcttaggcttcaattttgctcctagctctca-tccaa-tccttgattctt 324  Q
    ||||||||||||||||||||||||||||||||||||  || ||||||  | ||||||||||| ||| |||||||| | ||| ||||| ||||||||||||    
T  40885490 tgattatgatgaattctaacccccttaccttagataatgattaatccaaa-cttaggcttcactttagctcctagat-tcactccaaatccttgattctt 40885393  T
Q  325 caagttcctcttctctctaacccttttctcctttgct 361  Q
    ||||||||||||||||||||||||||||| |||||||    
T  40885392 caagttcctcttctctctaacccttttctgctttgct 40885356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 16 - 167
Target Start/End: Complemental strand, 13809697 - 13809547
Alignment:
Q  16 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattc-accaattgagcatattttcaacatataccaacttctc 114  Q
    |||||||||| || ||||||||||||| ||||||||||||||| ||||||| |||||||||| || ||||||||||| |||||||||||||||  |||||    
T  13809697 caacaacaac-atcaattgatcatgaatcttatcacaattcaacaacaacatagcataattcaactaattgagcata-tttcaacatataccattttctc 13809600  T
Q  115 atactttgaacatgtgattcaactaacaacaattcaattatccataacttcat 167  Q
    ||||||||||||||  ||   || |||||||||||||||| | | ||||||||    
T  13809599 atactttgaacatgaaatctcaccaacaacaattcaattaccaacaacttcat 13809547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 30 - 170
Target Start/End: Complemental strand, 53907873 - 53907734
Alignment:
Q  30 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatgt 129  Q
    ||||||||||||||| | ||||||||||  |||||||| ||||||||||||||||| |||||||||| ||| ||||| | || |||||||||||||||      
T  53907873 aattgatcatgaaacatttcacaattcatcaacaacaatgcataattcaccaattgggcatattttc-acacatacccatttttcatactttgaacatac 53907775  T
Q  130 gattcaactaacaacaattcaattatccataacttcataca 170  Q
     || ||||||| ||||||||||| || ||||||||||||||    
T  53907774 aatccaactaataacaattcaatcattcataacttcataca 53907734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 168 - 331
Target Start/End: Complemental strand, 55376585 - 55376423
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagat-aga 266  Q
    |||||| ||||||||| |||||||||||||| |||||| |||||||||||||| ||| ||||||||||||||||  |||||||||||||||||||| ||     
T  55376585 acaattaatcaattcatccaattaagcacttatcatacaaataattgaaaatttcaa-aagtgattatgatgaagactaacccccttaccttagataagg 55376487  T
Q  267 gtaatccctagcttaggcttcaattttgctcctagctctcatccaatccttgattcttcaagttc 331  Q
     | | ||| | ||||||||||||||| |||||||   |||| ||||| |||| ||||||||||||    
T  55376486 atcaacccaaacttaggcttcaatttagctccta-agctcacccaattcttggttcttcaagttc 55376423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 16 - 167
Target Start/End: Original strand, 15044888 - 15045038
Alignment:
Q  16 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaa-ttgagcatattttcaacatataccaacttctc 114  Q
    |||||||||| || |||||| |||||| ||||||||||||||| ||||||| ||||||||||| ||| |||||||||  ||||||||||| ||  |||||    
T  15044888 caacaacaac-atcaattgaacatgaatcttatcacaattcaacaacaacatagcataattcatcaatttgagcata-attcaacatatatcactttctc 15044985  T
Q  115 atactttgaacatgtgattcaactaacaacaattcaattatccataacttcat 167  Q
    ||||||||||||||  |||  || |||||||||||||||||| | ||||||||    
T  15044986 atactttgaacatgaaatttcaccaacaacaattcaattatcaacaacttcat 15045038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 16 - 167
Target Start/End: Complemental strand, 52265695 - 52265545
Alignment:
Q  16 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaa-ttgagcatattttcaacatataccaacttctc 114  Q
    |||||||||| || |||||| |||||| ||||||||||||||| |||||||  |||||||||| ||| ||||||||| |||||||||||||||  |||||    
T  52265695 caacaacaac-atcaattgaacatgaatcttatcacaattcaacaacaacattgcataattcaacaatttgagcata-tttcaacatataccactttctc 52265598  T
Q  115 atactttgaacatgtgattcaactaacaacaattcaattatccataacttcat 167  Q
    |||||||||||||   |||   |||||||||||||||||||| | ||||||||    
T  52265597 atactttgaacataaaatttctctaacaacaattcaattatcaacaacttcat 52265545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 30 - 105
Target Start/End: Complemental strand, 820090 - 820015
Alignment:
Q  30 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatatac 105  Q
    ||||||||||||||||||||||||||||  |||||||| |||||||||||||||||||||||||||||||| ||||    
T  820090 aattgatcatgaaacttatcacaattcatcaacaacaatgcataattcaccaattgagcatattttcaacacatac 820015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 31 - 168
Target Start/End: Complemental strand, 30232669 - 30232533
Alignment:
Q  31 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaac--ttctcatactttgaacatg 128  Q
    ||||||||||||||||||||||||| || ||||||| ||||||||||||||||||||||||||||| ||||| ||| ||  ||| |||||||||| ||||    
T  30232669 attgatcatgaaacttatcacaatttaacaacaacatagcataattcaccaattgagcatattttc-acata-acccacttttcacatactttgatcatg 30232572  T
Q  129 tgattcaactaacaacaattcaattatccataacttcata 168  Q
       ||  || ||||||||||||||||| ||||||||||||    
T  30232571 aagtttcaccaacaacaattcaattat-cataacttcata 30232533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 229 - 349
Target Start/End: Complemental strand, 19821701 - 19821580
Alignment:
Q  229 tgattatgatgaattctaacccccttaccttagatagagtaatcc-ctagcttaggcttcaattttgctcctagctctcatccaatccttgattcttcaa 327  Q
    ||||||||||||||||||||||||||||||||| ||||  ||| | |||| |   |||||| ||| |||||||| ||||  ||||||||||| |||||||    
T  19821701 tgattatgatgaattctaacccccttaccttagttagatcaattctctagttctagcttcactttagctcctagatctcccccaatccttgaatcttcaa 19821602  T
Q  328 gttcctcttctctctaaccctt 349  Q
    | ||||||||||||||||||||    
T  19821601 gctcctcttctctctaaccctt 19821580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 93 - 170
Target Start/End: Complemental strand, 20813658 - 20813581
Alignment:
Q  93 tttcaacatataccaacttctcatactttgaacatgtgattcaactaacaacaattcaattatccataacttcataca 170  Q
    |||||||| ||||| | || ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||    
T  20813658 tttcaacacatacccatttttcatactttgaacatgtaattcaaccaacaacaattcaattatccataacttcataca 20813581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 167
Target Start/End: Complemental strand, 15109536 - 15109386
Alignment:
Q  16 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaatt-gagcatattttcaacatataccaacttctc 114  Q
    |||||||||| || |||||| |||||| ||||||||||||||| ||||||| ||||||||| | ||||| ||| ||| || ||||||||| ||  |||||    
T  15109536 caacaacaac-atcaattgaacatgaatcttatcacaattcaacaacaacatagcataatttatcaatttgagtataatt-caacatatatcactttctc 15109439  T
Q  115 atactttgaacatgtgattcaactaacaacaattcaattatccataacttcat 167  Q
    ||||||||||||||  |||  || |||||||||||||||||| | ||||||||    
T  15109438 atactttgaacatgaaatttcaccaacaacaattcaattatcaacaacttcat 15109386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 167
Target Start/End: Complemental strand, 41166133 - 41165983
Alignment:
Q  16 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaatt-gagcatattttcaacatataccaacttctc 114  Q
    |||||||||| || |||||| |||||  |||  |||||||||| ||||||| ||||||||||| ||||| ||||||| || ||||||||| ||  |||||    
T  41166133 caacaacaac-atcaattgaacatgactcttgccacaattcaacaacaacatagcataattcaacaatttgagcataatt-caacatatatcactttctc 41166036  T
Q  115 atactttgaacatgtgattcaactaacaacaattcaattatccataacttcat 167  Q
    ||||||||||||||  |||  ||||||||||||||||||||| | ||||||||    
T  41166035 atactttgaacatgaaatttcactaacaacaattcaattatcaacaacttcat 41165983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 186 - 351
Target Start/End: Complemental strand, 34177617 - 34177450
Alignment:
Q  186 caattaagcactt-ttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagatagagtaa-tccctagcttagg 283  Q
    ||||||||||||| ||||||| |  |||  |||||| || ||| ||||||||||||||||||| ||||||||||||| ||||  || |||||||||   |    
T  34177617 caattaagcacttattcatacaacaaatgaaaaattacactaaatgattatgatgaattctaa-ccccttaccttagttagatcaattccctagctctag 34177519  T
Q  284 cttcaattttgctcctagctctcatccaat-ccttgattcttcaagttcctcttctctctaaccctttt 351  Q
    ||||| ||| ||||||||||||| |||||| |||| | |||||||| ||||||||||||| ||| ||||    
T  34177518 cttcactttagctcctagctctcttccaatcccttaaatcttcaagctcctcttctctctgaccatttt 34177450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 30 - 156
Target Start/End: Complemental strand, 47535239 - 47535113
Alignment:
Q  30 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaatt-gagcatattttcaacatataccaacttctcatactttgaacatg 128  Q
    |||||| |||||  ||||||| ||||||| ||||||| ||||||||||| ||||| |||||||||| ||||||||| ||  |||||||||||||||| ||    
T  47535239 aattgaacatgattcttatcataattcaacaacaacatagcataattcatcaatttgagcatattt-caacatatatcactttctcatactttgaacttg 47535141  T
Q  129 tgattcaactaacaacaattcaattatc 156  Q
      |||  || ||||||||||||||||||    
T  47535140 aaatttcaccaacaacaattcaattatc 47535113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 30 - 170
Target Start/End: Complemental strand, 18494502 - 18494362
Alignment:
Q  30 aattgatcatgaaacttatcacaattcaataacaacaaagcataattc-accaattgagcatattttcaacatatacca-acttctcatactttgaacat 127  Q
    ||||||||||||| |||| |||||||||| ||||||| ||||| || | |||||||||||| | |||||||||||||||   |||||||||||||| |||    
T  18494502 aattgatcatgaatcttaacacaattcaacaacaacatagcatcatccaaccaattgagcaca-tttcaacatataccatttttctcatactttgatcat 18494404  T
Q  128 gtgattcaactaacaacaattcaattatccataacttcataca 170  Q
    |   ||  || ||||||||||||||||| ||||||||||||||    
T  18494403 gaagtttcaccaacaacaattcaattat-cataacttcataca 18494362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 14951836 - 14951896
Alignment:
Q  31 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 91  Q
    |||||||||||||| ||||||||||||  |||||| | |||||||||||||||||||||||    
T  14951836 attgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 14951896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 229 - 331
Target Start/End: Original strand, 13246738 - 13246841
Alignment:
Q  229 tgattatgatgaattctaacccccttaccttagat--agagtaatccctagcttaggcttcaattttgctcct-agctctcatccaatccttgattcttc 325  Q
    |||||||||| ||  ||||||||||||||||||||  ||| ||||||| | ||||||||||||||| |||||| ||||| | |||||| |||||||||||    
T  13246738 tgattatgataaagactaacccccttaccttagataaagattaatccc-aacttaggcttcaatttagctcctaagctcac-tccaattcttgattcttc 13246835  T
Q  326 aagttc 331  Q
    ||||||    
T  13246836 aagttc 13246841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 35 - 91
Target Start/End: Complemental strand, 5682704 - 5682648
Alignment:
Q  35 atcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 91  Q
    |||||||||| ||||||||||||  |||||| | |||||||||||||||||||||||    
T  5682704 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 5682648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 15272493 - 15272433
Alignment:
Q  31 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 91  Q
    |||||||||| ||| ||||||||||||  |||||| | |||||||||||||||||||||||    
T  15272493 attgatcatggaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 15272433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 186 - 266
Target Start/End: Original strand, 14901508 - 14901590
Alignment:
Q  186 caattaagcactt-ttcataccaataattgaaaa-ttgcaataag-tgattatgatgaattctaacccccttaccttagataga 266  Q
    ||||||||||||| ||||||| |||||||||||| |||||||||  ||||||||||||| | ||||||||||||||||| ||||    
T  14901508 caattaagcacttattcatac-aataattgaaaaattgcaataaaatgattatgatgaaatttaacccccttaccttagttaga 14901590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 229 - 266
Target Start/End: Complemental strand, 37956949 - 37956912
Alignment:
Q  229 tgattatgatgaattctaacccccttaccttagataga 266  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  37956949 tgattatgatgaattctaacccccttaccttagttaga 37956912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 25119388 - 25119328
Alignment:
Q  31 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 91  Q
    |||||||||||||| ||||||||||||  || ||| | |||||||||||||||||| ||||    
T  25119388 attgatcatgaaacatatcacaattcatcaaaaaccatgcataattcaccaattgatcata 25119328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 139 - 170
Target Start/End: Complemental strand, 819996 - 819965
Alignment:
Q  139 aacaacaattcaattatccataacttcataca 170  Q
    ||||||||||||||||||||||||||||||||    
T  819996 aacaacaattcaattatccataacttcataca 819965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 319 - 349
Target Start/End: Complemental strand, 5682367 - 5682337
Alignment:
Q  319 attcttcaagttcctcttctctctaaccctt 349  Q
    |||||||||||||||||||||||||||||||    
T  5682367 attcttcaagttcctcttctctctaaccctt 5682337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 10104453 - 10104380
Alignment:
Q  15 tcaacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagca 89  Q
    ||||||||||| || |||||| |||||| | |||| |||||||| ||||||  |||| |||||||||||||||||    
T  10104453 tcaacaacaac-atcaattgaacatgaatcatatctcaattcaacaacaacttagcaaaattcaccaattgagca 10104380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 260
Target Start/End: Complemental strand, 7185784 - 7185739
Alignment:
Q  215 aaaattgcaataagtgattatgatgaattctaacccccttacctta 260  Q
    |||||| || ||| ||||||||||||||||||||| ||||||||||    
T  7185784 aaaattacactaaatgattatgatgaattctaacctccttacctta 7185739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 156
Target Start/End: Original strand, 18276494 - 18276633
Alignment:
Q  16 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaatt-gagcatattttcaacatataccaacttctc 114  Q
    |||||||||| || |||||| |||||| || |||||||||||| ||||| | |||| |||||| || || |||||||  ||||||||||| ||  ||| |    
T  18276494 caacaacaac-atcaattgaacatgaatctcatcacaattcaacaacaatatagcacaattcaacatttagagcata-attcaacatataacactttcac 18276591  T
Q  115 atactttgaacatgtgattcaactaacaacaattcaattatc 156  Q
    || |||||||||||  |||  || |||||||||| |||||||    
T  18276592 atgctttgaacatgcaatttcaccaacaacaatttaattatc 18276633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 123; Significance: 4e-63; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 16 - 170
Target Start/End: Original strand, 5001 - 5154
Alignment:
Q  16 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctca 115  Q
    |||||||||| || ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||    
T  5001 caacaacaac-atcaattgatcatgaaacttatcacaattcaacaacaacaaatcataattcaccaattaagcatattttcaacatataccaacttctca 5099  T
Q  116 tactttgaacatgtgattcaactaacaacaattcaattatccataacttcataca 170  Q
    |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  5100 tactgtgaacatgtaattcaactaacaacaattcaattatccataacttcataca 5154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 123; Significance: 4e-63; HSPs: 5)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 178 - 356
Target Start/End: Original strand, 70883 - 71063
Alignment:
Q  178 aattcacccaattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagatagagtaatc--cct 275  Q
    |||||||||||||||||||||||||||| ||||| |||||||| |||||| ||||||||||||||||||||||||||||||||| |||| |||||  |||    
T  70883 aattcacccaattaagcacttttcatac-aataactgaaaattacaataaatgattatgatgaattctaacccccttaccttagttagattaatctccct 70981  T
Q  276 agcttaggcttcaattttgctcctagctctcatccaatccttgattcttcaagttc-ctcttctctctaacccttttctcct 356  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  70982 agcttaggcttcaattttgctcctagctctctcccaatccttgattcttcaagttctctcttctctttaacccttttctcct 71063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 175 - 357
Target Start/End: Original strand, 31310 - 31497
Alignment:
Q  175 atcaattcacccaattaagcacttttcataccaataattgaaaa-ttgcaataagtgattatgatgaattctaaccccc--ttaccttagatagagtaat 271  Q
    ||||||||||||||||||||||||||||||| |||||||||||| ||||||| | ||||||||||||||||||||||||  ||||||||| |||| ||||    
T  31310 atcaattcacccaattaagcacttttcatac-aataattgaaaaattgcaatgaatgattatgatgaattctaacccccccttaccttagttagattaat 31408  T
Q  272 c--cctagcttaggcttcaattttgctcctagctctcatccaatccttgattcttcaagtt-cctcttctctctaacccttttctcctt 357  Q
    |  |||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||| || ||||||||||||||||||||||||    
T  31409 ctccctagcttaggcttcaattttgatcctagctctcttccaatccttgattcatcaagttaccccttctctctaacccttttctcctt 31497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #3
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 30 - 170
Target Start/End: Original strand, 70686 - 70826
Alignment:
Q  30 aattgatcatgaaacttatcacaattcaataacaacaaagcataattc-accaattgagcatattttcaacatataccaacttctcatactttgaacatg 128  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||| |||  |||||||||||||||||||    
T  70686 aattgatcatgaaacttatcacaattcaacaacaacaaagcataattcaaccaattaagcatattttcaacatattccattttctcatactttgaacatg 70785  T
Q  129 tgattcaactaacaacaattcaattatccataacttcataca 170  Q
      ||||||||||||||||||||||||||||||||||||||||    
T  70786 -aattcaactaacaacaattcaattatccataacttcataca 70826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 30 - 170
Target Start/End: Original strand, 31117 - 31256
Alignment:
Q  30 aattgatcatgaaacttatcacaattcaataacaacaaagcataa-ttcaccaattgagcatattttcaacatataccaacttctcatactttgaacatg 128  Q
    |||| |||||||||||||||||||||||| ||| ||||| ||||| || || |||||||||||||||||||||||||||  |||| ||||||||||||||    
T  31117 aattaatcatgaaacttatcacaattcaacaactacaaa-cataacttaacaaattgagcatattttcaacatataccattttcttatactttgaacatg 31215  T
Q  129 tgattcaactaacaacaattcaattatccataacttcataca 170  Q
      ||||||||||| ||||||||||||||||||||||||||||    
T  31216 -aattcaactaaccacaattcaattatccataacttcataca 31256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 156
Target Start/End: Complemental strand, 97372 - 97246
Alignment:
Q  30 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaatt-gagcatattttcaacatataccaacttctcatactttgaacatg 128  Q
    |||||| |||||| || |||| ||||||| | ||||| ||||||||||| || || ||||||| || ||||||||| ||  ||| |||||||||||||||    
T  97372 aattgaacatgaatctcatcataattcaacaccaacatagcataattcaacatttagagcataatt-caacatataacactttcacatactttgaacatg 97274  T
Q  129 tgattcaactaacaacaattcaattatc 156  Q
      |||| || ||||||||||||||||||    
T  97273 caattccaccaacaacaattcaattatc 97246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 123; Significance: 4e-63; HSPs: 64)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 16 - 170
Target Start/End: Original strand, 11287477 - 11287630
Alignment:
Q  16 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctca 115  Q
    |||||||||| || || |||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  11287477 caacaacaac-atcaactgatcatgaaacttatcacaattcatcaacaacatagcataattcaccaattgagcatattttcaacatataccaacttctca 11287575  T
Q  116 tactttgaacatgtgattcaactaacaacaattcaattatccataacttcataca 170  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  11287576 tactttgaacatgtaattcaactaacaacaattcaattatccataacttcataca 11287630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 168 - 356
Target Start/End: Complemental strand, 45452155 - 45451966
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagatagag 267  Q
    |||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||      
T  45452155 acaattaatcaattcacccaattaagcacttttcatacaaataattgaaaattgcaataaatgattatgatgaattctaacccccttaccttagttaggt 45452056  T
Q  268 taatccc--tagcttaggcttcaattttgctcctagctctcatccaatccttgattcttcaagttcctcttctctctaacccttttctcct 356  Q
    ||||| |  |||||||||||||||||||||||||||||||| | ||  |||||||||||||||| |  |||||||||||||||||||||||    
T  45452055 taatctctatagcttaggcttcaattttgctcctagctctc-ttcatcccttgattcttcaagtcctccttctctctaacccttttctcct 45451966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 168 - 350
Target Start/End: Original strand, 11287677 - 11287859
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaa-ttgcaataagtgattatgatgaattctaacccccttaccttagataga 266  Q
    |||||| |||||||||||||||||| |||||||||||| |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  11287677 acaattaatcaattcacccaattaaacacttttcatac-aataattgaaaaattgcaataa-tgattatgatgaattctaacccccttaccttagttaga 11287774  T
Q  267 gtaatc--cctagcttaggcttcaattttgctcctagctctcatccaatccttgattcttcaagttcctcttctctctaacccttt 350  Q
     |||||  |||||||||| ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||    
T  11287775 ttaatctccctagcttagacttcaattttgctcctagctctc-tccactccttgattcttcaagttcctcttctctctaacccttt 11287859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 168 - 356
Target Start/End: Original strand, 12759247 - 12759436
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaa-ttgcaataagtgattatgatgaattctaacccccttaccttagataga 266  Q
    |||||| |||||||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||     
T  12759247 acaattaatcaattcacccaattaaacacttttcatacaaataattgaaaaattgcaataagtgattatgatgaattctaacccccttaccttagttagg 12759346  T
Q  267 gtaa--tccctagcttaggcttcaattttgctcctagctctcatccaatccttgattcttcaagttcctcttctctctaacccttttctcct 356  Q
     |||  |||||||||||| ||||||||||||||||||||||| | ||  ||||||||||||||| |||||||||||||||| ||||||||||    
T  12759347 ttaatctccctagcttagacttcaattttgctcctagctctc-ttcaccccttgattcttcaag-tcctcttctctctaactcttttctcct 12759436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 168 - 356
Target Start/End: Original strand, 3895285 - 3895472
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagatagag 267  Q
    |||||| ||||||||| |||||||||||||| |||||| |||||||||||||| ||| |||||||||||||||||||||||||||||||||||| |||      
T  3895285 acaattaatcaattcatccaattaagcacttatcatacaaataattgaaaattacaa-aagtgattatgatgaattctaacccccttaccttag-taggt 3895382  T
Q  268 taa--tccctagcttaggcttcaattttgctcctagctctcatccaatccttgattcttcaagttcctcttctctctaacccttttctcct 356  Q
    |||  ||||||||||||||||||||||||||||||||||    |||||||||||||||||||| |||||||||||||||||||||||||||    
T  3895383 taatctccctagcttaggcttcaattttgctcctagctcaaccccaatccttgattcttcaag-tcctcttctctctaacccttttctcct 3895472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 16 - 170
Target Start/End: Complemental strand, 26070451 - 26070298
Alignment:
Q  16 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctca 115  Q
    |||||||||| || ||||||||||||||||||||||||||||  ||||||| | ||||||||||||||| ||||||||||||||||||||||  ||||||    
T  26070451 caacaacaac-atcaattgatcatgaaacttatcacaattcatcaacaacataacataattcaccaattaagcatattttcaacatataccattttctca 26070353  T
Q  116 tactttgaacatgtgattcaactaacaacaattcaattatccataacttcataca 170  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  26070352 tactttgaacatgtaattcaactaacaacaattcaattatccataacttcataca 26070298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 16 - 170
Target Start/End: Complemental strand, 26094238 - 26094085
Alignment:
Q  16 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctca 115  Q
    |||||||||| || ||||||||||||||||||||||||||||  ||||||| | ||||||||||||||| ||||||||||||||||||||||  ||||||    
T  26094238 caacaacaac-atcaattgatcatgaaacttatcacaattcatcaacaacataacataattcaccaattaagcatattttcaacatataccattttctca 26094140  T
Q  116 tactttgaacatgtgattcaactaacaacaattcaattatccataacttcataca 170  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  26094139 tactttgaacatgtaattcaactaacaacaattcaattatccataacttcataca 26094085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 168 - 356
Target Start/End: Original strand, 143899 - 144087
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagatagag 267  Q
    |||||| ||||||||| |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||      
T  143899 acaattaatcaattcatccaattaagcactttttatacaaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttag-taggt 143997  T
Q  268 taa--tccctagcttaggcttcaattttgctcctagctc-tcatccaatccttgattcttcaagttcctcttctctctaacccttttctcct 356  Q
    |||  || ||||||||||||||||||||||||||||||| ||  |||| ||||||||||||||| ||||||||||||| |||||||||||||    
T  143998 taatctctctagcttaggcttcaattttgctcctagctcttctcccaacccttgattcttcaag-tcctcttctctct-acccttttctcct 144087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 15 - 166
Target Start/End: Complemental strand, 7284248 - 7284098
Alignment:
Q  15 tcaacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctc 114  Q
    ||||||||||| || ||||||||||||||||||||||||||||| |||||||||| |||||||||||||| |||||||||||||||||||||||||||||    
T  7284248 tcaacaacaac-atcaattgatcatgaaacttatcacaattcaacaacaacaaaggataattcaccaattaagcatattttcaacatataccaacttctc 7284150  T
Q  115 atactttgaacatgtgattcaactaacaacaattcaattatccataacttca 166  Q
    |||||||||||||   |||||||||| ||||||||||| |||||||||||||    
T  7284149 atactttgaacatacaattcaactaataacaattcaatcatccataacttca 7284098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 15 - 170
Target Start/End: Complemental strand, 15822619 - 15822465
Alignment:
Q  15 tcaacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctc 114  Q
    ||||||||||| || ||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||  |||      
T  15822619 tcaacaacaac-atcaattgatcatgaaacttatcacaattcaacaacaacaaagcataattcaccatttgagcatattttcaacatataccattttcat 15822521  T
Q  115 atactttgaacatgtgattcaactaacaacaattcaattatccataacttcataca 170  Q
    | | ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  15822520 acattttgaacatgtaattcaactaacaacaattcaattatccataacttcataca 15822465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 185 - 357
Target Start/End: Complemental strand, 12248091 - 12247915
Alignment:
Q  185 ccaattaagcactt-ttcataccaataattgaaaa-ttgcaataagtgattatgatgaattctaacccccttaccttagatagagtaatc--cctagctt 280  Q
    |||||||||||||| ||||||| |||||||||||| ||||||||  ||||||||||||||||||||||||||||||||| |||| |||||  ||||||||    
T  12248091 ccaattaagcacttattcatac-aataattgaaaaattgcaatatatgattatgatgaattctaacccccttaccttagttagattaatctccctagctt 12247993  T
Q  281 aggcttcaattttgctcctagctctcatccaatccttgattcttcaag-ttcctcttctctctaacccttttctcctt 357  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  12247992 aggcttcaattttgctcctacctctcttccaatccttgattcttcaagtttccccttctctctaacccttttctcctt 12247915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 31 - 170
Target Start/End: Original strand, 3895099 - 3895238
Alignment:
Q  31 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatgtg 130  Q
    |||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||||||||| ||||| | || ||||||||||||||||      
T  3895099 attgatcatgaaacttatcacaattcatcaacaacatagcataattcaccaattgagcatattttcaacacatacccatttttcatactttgaacatgca 3895198  T
Q  131 attcaactaacaacaattcaattatccataacttcataca 170  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  3895199 attcaactaacaacaattcaattatccataacttcataca 3895238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 168 - 356
Target Start/End: Complemental strand, 15822419 - 15822231
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagatagag 267  Q
    |||||| ||||||||||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||||||||||||||||||| |||      
T  15822419 acaattaatcaattcacccaattaagcacttttcatacaaataactgaaaattacaataagtgattatgatgaattctaacccccttaccttag-taggt 15822321  T
Q  268 taa--tccctagcttaggcttcaattttgctcctagctc-tcatccaatccttgattcttcaagttcctcttctctctaacccttttctcct 356  Q
    |||  || ||||||||| ||| ||||||||||||||||| ||  |||| ||||||||||||||| ||||||||||||| |||||||||||||    
T  15822320 taatctctctagcttagactttaattttgctcctagctcttctcccaacccttgattcttcaag-tcctcttctctct-acccttttctcct 15822231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 168 - 356
Target Start/End: Original strand, 44865491 - 44865677
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagatagag 267  Q
    |||||| ||||||||| ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| ||||||||||||||||||| |||      
T  44865491 acaattaatcaattcatccaattaagcacttttcatacaaataattgaaaattacaataagtgattatgatgaa-tctaacccccttaccttag-taggt 44865588  T
Q  268 taa--tccctagcttaggcttcaattttgctcctagctctcatccaatccttgattcttcaagttcctcttctctctaacccttttctcct 356  Q
    |||  || ||||||||||||||||||||||||||||||||| | | | ||||||||||||||| || ||||||||||||||||||| ||||    
T  44865589 taatctctctagcttaggcttcaattttgctcctagctctctttc-acccttgattcttcaag-tcatcttctctctaacccttttttcct 44865677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 16 - 170
Target Start/End: Complemental strand, 12370027 - 12369874
Alignment:
Q  16 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctca 115  Q
    |||||||||| || |||| ||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||| | || |||    
T  12370027 caacaacaac-atcaattaatcatgaaagttatcacaattcaacaacaacaaggcataattcaccaattgagcatattttcaacagatacccatttttca 12369929  T
Q  116 tactttgaacatgtgattcaactaacaacaattcaattatccataacttcataca 170  Q
    |||||||||||||| ||||||| ||||||||||||||||||| ||||||||||||    
T  12369928 tactttgaacatgtaattcaaccaacaacaattcaattatccgtaacttcataca 12369874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 168 - 356
Target Start/End: Complemental strand, 12369827 - 12369637
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagatagag 267  Q
    |||||| || |||||||||||||||||||||||||||| ||||||||||||||||||||| |||| |||||||| ||||||||||||||||||| |||      
T  12369827 acaattaattaattcacccaattaagcacttttcatacaaataattgaaaattgcaataaatgataatgatgaaatctaacccccttaccttagttaggt 12369728  T
Q  268 taa--tccctagcttaggcttcaattttgctcctagctc-tcatccaatccttgattcttcaagttcctcttctctctaacccttttctcct 356  Q
    |||  || ||||||||||||||||||| |||||||  || ||  |||| ||||||||||||||| ||||||||||||||||| |||||||||    
T  12369727 taatctctctagcttaggcttcaatttcgctcctaaatcttctcccaacccttgattcttcaag-tcctcttctctctaacctttttctcct 12369637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 185 - 352
Target Start/End: Complemental strand, 16569976 - 16569807
Alignment:
Q  185 ccaattaagcactt-ttcataccaataattgaaaa-ttgcaataagtgattatgatgaattctaacccccttaccttagatagagtaatc--cctagctt 280  Q
    |||||||||||||| ||||||| |||||||||||| ||||||||| ||||||||||||||| ||||||||||||||| | |||| |||||  ||||||||    
T  16569976 ccaattaagcacttattcatac-aataattgaaaaattgcaataa-tgattatgatgaattttaacccccttacctttgttagattaatctccctagctt 16569879  T
Q  281 aggcttcaattttgctcctagctctcatccaatccttgattcttcaagttcctcttctctctaacccttttc 352  Q
    | |||||||||| |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  16569878 atgcttcaatttagctcctagctctcccccaatccttgattcttcaagttcctcttctctctaacccttttc 16569807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 185 - 352
Target Start/End: Original strand, 16595686 - 16595855
Alignment:
Q  185 ccaattaagcactt-ttcataccaataattgaaaa-ttgcaataagtgattatgatgaattctaacccccttaccttagatagagtaatc--cctagctt 280  Q
    |||||||||||||| ||||||| |||||||||||| ||||||||| ||||||||||||||| ||||||||||||||| | |||| |||||  ||||||||    
T  16595686 ccaattaagcacttattcatac-aataattgaaaaattgcaataa-tgattatgatgaattttaacccccttacctttgttagattaatctccctagctt 16595783  T
Q  281 aggcttcaattttgctcctagctctcatccaatccttgattcttcaagttcctcttctctctaacccttttc 352  Q
    | |||||||||| |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  16595784 atgcttcaatttagctcctagctctcccccaatccttgattcttcaagttcctcttctctctaacccttttc 16595855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 16 - 170
Target Start/End: Complemental strand, 16570193 - 16570039
Alignment:
Q  16 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattca-ccaattgagcatattttcaacatataccaacttctc 114  Q
    |||||||||| || |||||||||||||||||||| |||||||| ||||||| ||||||||||| |||||||||||||||||| | ||||||||  |||||    
T  16570193 caacaacaac-atcaattgatcatgaaacttatctcaattcaacaacaacatagcataattcaaccaattgagcatattttccagatataccattttctc 16570095  T
Q  115 atactttgaacatgtgattcaactaacaacaattcaattatccataacttcataca 170  Q
    ||||||||||||||  |||||||||||||||| |||||||||||||||||||||||    
T  16570094 atactttgaacatgaaattcaactaacaacaaatcaattatccataacttcataca 16570039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 16 - 170
Target Start/End: Original strand, 16595469 - 16595623
Alignment:
Q  16 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattca-ccaattgagcatattttcaacatataccaacttctc 114  Q
    |||||||||| || |||||||||||||||||||| |||||||| ||||||| ||||||||||| |||||||||||||||||| | ||||||||  |||||    
T  16595469 caacaacaac-atcaattgatcatgaaacttatctcaattcaacaacaacatagcataattcaaccaattgagcatattttccagatataccattttctc 16595567  T
Q  115 atactttgaacatgtgattcaactaacaacaattcaattatccataacttcataca 170  Q
    ||||||||||||||  |||||||||||||||| |||||||||||||||||||||||    
T  16595568 atactttgaacatgaaattcaactaacaacaaatcaattatccataacttcataca 16595623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 168 - 356
Target Start/End: Original strand, 35095075 - 35095262
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagatagag 267  Q
    |||||| ||||||||| |||||||||||||| |||||| |||||||||||||| ||| |||||||||||||||||||||||||||||||||||| |||      
T  35095075 acaattaatcaattcatccaattaagcacttatcatacaaataattgaaaattacaa-aagtgattatgatgaattctaacccccttaccttag-taggt 35095172  T
Q  268 taatc-cct-agcttaggcttcaattttgctcctagctctcatccaatccttgattcttcaagttcctcttctctctaacccttttctcct 356  Q
    ||||| ||| |||||| |||||||||||||||||||||     ||||| |||||||||||||| |||||||||||||||||||||||||||    
T  35095173 taatctcctaagcttaagcttcaattttgctcctagcttaaccccaatacttgattcttcaag-tcctcttctctctaacccttttctcct 35095262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 31 - 170
Target Start/End: Complemental strand, 12248294 - 12248154
Alignment:
Q  31 attgatcatgaaacttatcacaattcaataacaacaaagcataattca-ccaattgagcatattttcaacatataccaacttctcatactttgaacatgt 129  Q
    |||||||||||| ||||||||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||| |  |||||||||||| ||||||     
T  12248294 attgatcatgaatcttatcacaattcaacaacaacatagcataattcaaccaattgagcatattttcaacatatactattttctcatactttaaacatga 12248195  T
Q  130 gattcaactaacaacaattcaattatccataacttcataca 170  Q
     |||||||||| |||||||||||||||||||||||||||||    
T  12248194 aattcaactaataacaattcaattatccataacttcataca 12248154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 168 - 361
Target Start/End: Complemental strand, 49047661 - 49047467
Alignment:
Q  168 acaatttatcaattcacccaattaagcactt-ttcataccaataattgaaaattg-caataagtgattatgatgaattctaacccccttaccttagatag 265  Q
    |||||| ||||||| || ||||||||||||| ||||||  || ||||||||| || |||||| ||||||||||||||||||||||||||||||||| |||    
T  49047661 acaattaatcaatt-actcaattaagcacttattcatat-aacaattgaaaaatggcaataaatgattatgatgaattctaacccccttaccttagttag 49047564  T
Q  266 agtaat-ccctagcttaggcttcaattttgctcctagctctcatccaatccttgattcttcaagttcctcttctctctaacccttttctcctttgct 361  Q
    | |||| |||||| | | |||||||||| ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||  |||||||    
T  49047563 attaattccctagttcaagcttcaatttagctcctagctctcttccaatccttgaatcttcaagttcctcttctctctaacccttttcctctttgct 49047467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 168 - 356
Target Start/End: Complemental strand, 39046615 - 39046427
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagatagag 267  Q
    |||||| ||||||||| |||||||||||||| |||||| |||||||||||| |   | |||||||||||||||||||||||||||||||||||| |||      
T  39046615 acaattaatcaattcatccaattaagcacttatcatacaaataattgaaaaataacaaaagtgattatgatgaattctaacccccttaccttag-taggt 39046517  T
Q  268 taatc-cct-agcttaggcttcaattttgctcctagctctcatccaatccttgattcttcaagttcctcttctctctaacccttttctcct 356  Q
    ||||| ||| |||||| |||||||||||||||||||||     |||||||||||||||||||| |||||||||||||||||||||||||||    
T  39046516 taatctcctaagcttaagcttcaattttgctcctagcttaaccccaatccttgattcttcaag-tcctcttctctctaacccttttctcct 39046427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 168 - 353
Target Start/End: Original strand, 47290041 - 47290229
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaa-ttgcaataagtgattatgatgaattctaacccccttaccttagataga 266  Q
    |||||| ||||||||| ||||||||||| ||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||  |||     
T  47290041 acaattaatcaattcatccaattaagcatttttcatacaaataattgaaaaattgcaataagtgattatgatgaattctaacccccttaccttaattagg 47290140  T
Q  267 gtaa--tccctagcttaggcttcaattttgctcctagctc-tcatccaatccttgattcttcaagttcctcttctctctaacccttttct 353  Q
     |||  || |||| |||| ||||||||||||||| ||||| ||  |||| ||||||||||||||| ||||||||||||||||||| ||||    
T  47290141 ttaatctctctagtttagacttcaattttgctccaagctcttctcccaacccttgattcttcaag-tcctcttctctctaaccctgttct 47290229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 30 - 170
Target Start/End: Original strand, 12759060 - 12759200
Alignment:
Q  30 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatgt 129  Q
    ||||||||||||||||||||| ||||||  ||||||| ||||||||||||||||||||||||||||||||| |||||   || ||| | |||||||||||    
T  12759060 aattgatcatgaaacttatcataattcaccaacaacatagcataattcaccaattgagcatattttcaacacatacccctttttcacattttgaacatgt 12759159  T
Q  130 gattcaactaacaacaattcaattatccataacttcataca 170  Q
     ||||||| ||||||||||||||||||||||||||||||||    
T  12759160 aattcaaccaacaacaattcaattatccataacttcataca 12759200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 168 - 356
Target Start/End: Complemental strand, 13862916 - 13862731
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagatagag 267  Q
    |||||| ||| ||||||||||||||||    ||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||      
T  13862916 acaattaatctattcacccaattaagc----ttcatacaaataattgaaaattacaataagtgattatgatgaattctaacccccttaccttagttaggt 13862821  T
Q  268 taa--tccctagcttaggcttcaattttgctcctagctc-tcatccaatccttgattcttcaagttcctcttctctctaacccttttctcct 356  Q
    |||  || ||| ||||||||||||||||||||||||||| ||  |||| | ||||||||||||| ||||||||||||| |||||||||||||    
T  13862820 taatctctctaacttaggcttcaattttgctcctagctcttctcccaaccattgattcttcaag-tcctcttctctct-acccttttctcct 13862731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 30 - 170
Target Start/End: Complemental strand, 13863104 - 13862963
Alignment:
Q  30 aattgatcatgaaacttatcacaattcaataacaacaaagcataattca-ccaattgagcatattttcaacatataccaacttctcatactttgaacatg 128  Q
    |||||| ||||||  |||||||||||||| ||||||| ||||||||||| |||||||||||||||||||||| ||||| | || ||||||||||||||||    
T  13863104 aattgaacatgaatattatcacaattcaacaacaacatagcataattcaaccaattgagcatattttcaacacatacccatttttcatactttgaacatg 13863005  T
Q  129 tgattcaactaacaacaattcaattatccataacttcataca 170  Q
    | ||||||| ||||||||||||||||| ||||||||||||||    
T  13863004 taattcaaccaacaacaattcaattattcataacttcataca 13862963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 30 - 170
Target Start/End: Complemental strand, 45452340 - 45452202
Alignment:
Q  30 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatgt 129  Q
    ||||||||||||||||||||||||||||  ||||||| |||||   |||| |||||||||||||||||||| ||||| | || |||||||||||||||||    
T  45452340 aattgatcatgaaacttatcacaattcatcaacaacatagcatg--tcacaaattgagcatattttcaacacatacccatttttcatactttgaacatgt 45452243  T
Q  130 gattcaactaacaacaattcaattatccataacttcataca 170  Q
     ||||||||||||||||| ||||||||||||||||||||||    
T  45452242 aattcaactaacaacaatccaattatccataacttcataca 45452202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 168 - 352
Target Start/End: Original strand, 13275037 - 13275222
Alignment:
Q  168 acaatttatcaattcacccaattaagcactt-ttcataccaataattgaaaattg-caataagtgattatgatgaattctaacccccttaccttagatag 265  Q
    |||||| ||||||| || ||||||||||||| ||||||| || ||||||||| || |||||| ||||||||||||||||||||||||||||||||| |||    
T  13275037 acaattaatcaatt-actcaattaagcacttattcatac-aacaattgaaaaatggcaataaatgattatgatgaattctaacccccttaccttagttag 13275134  T
Q  266 agtaat-ccctagcttaggcttcaattttgctcctagctctcatccaatccttgattcttcaagttcctcttctctctaacccttttc 352  Q
    | |||| ||||| || | | |||| ||| ||||||||||||| |||||||||||| ||||||||||||||||||||| ||||||||||    
T  13275135 attaattccctaactcaagattcactttagctcctagctctcttccaatccttgaatcttcaagttcctcttctctcgaacccttttc 13275222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 30 - 168
Target Start/End: Original strand, 47289854 - 47289992
Alignment:
Q  30 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcat--actttgaacat 127  Q
    ||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||||||||||||||||| ||||| | || ||||  |||||||||||    
T  47289854 aattgatcatgaaacttttcacaattcatcaacaacaaagcataattcaccaattgagcatattttcaacacataccca-ttttcatacactttgaacat 47289952  T
Q  128 gtgattcaactaacaacaattcaattatccataacttcata 168  Q
    || ||||||||||| ||||||||||||| ||||||||||||    
T  47289953 gtaattcaactaac-acaattcaattattcataacttcata 47289992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 168 - 358
Target Start/End: Complemental strand, 26070251 - 26070061
Alignment:
Q  168 acaatttatcaattcacccaattaagcactt-ttcataccaataattgaaaa-ttgcaataagtgattatgatgaattctaacccccttaccttagatag 265  Q
    |||||| ||||||| || ||||||||||||| ||||||||| |||||||||| ||||||||| ||||||||||||||||||||||| ||||||||| |||    
T  26070251 acaattaatcaatt-acacaattaagcacttattcatacca-taattgaaaaattgcaataa-tgattatgatgaattctaacccc-ttaccttagttag 26070156  T
Q  266 agtaatccct--agcttaggcttcaattttgctcctagctctcatcc-aatccttgattcttcaagttcctcttctctctaacccttttctccttt 358  Q
      ||||| ||  ||||||| ||||||||||||||||||||||  ||| || |||||||||||||||| ||||||||||||||||||||||||||||    
T  26070155 gttaatctctctagcttagacttcaattttgctcctagctcttctcccaacccttgattcttcaagt-cctcttctctctaacccttttctccttt 26070061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 168 - 358
Target Start/End: Complemental strand, 26094038 - 26093848
Alignment:
Q  168 acaatttatcaattcacccaattaagcactt-ttcataccaataattgaaaa-ttgcaataagtgattatgatgaattctaacccccttaccttagatag 265  Q
    |||||| ||||||| || ||||||||||||| ||||||||| |||||||||| ||||||||| ||||||||||||||||||||||| ||||||||| |||    
T  26094038 acaattaatcaatt-acacaattaagcacttattcatacca-taattgaaaaattgcaataa-tgattatgatgaattctaacccc-ttaccttagttag 26093943  T
Q  266 agtaatccct--agcttaggcttcaattttgctcctagctctcatcc-aatccttgattcttcaagttcctcttctctctaacccttttctccttt 358  Q
      ||||| ||  ||||||| ||||||||||||||||||||||  ||| || |||||||||||||||| ||||||||||||||||||||||||||||    
T  26093942 gttaatctctctagcttagacttcaattttgctcctagctcttctcccaacccttgattcttcaagt-cctcttctctctaacccttttctccttt 26093848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 30 - 170
Target Start/End: Original strand, 143712 - 143852
Alignment:
Q  30 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcat--actttgaacat 127  Q
    ||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||||||||||||||||| ||||| | || ||||  |||||||||||    
T  143712 aattgatcatgaaacttttcacaattcatcaacaacaaagcataattcaccaattgagcatattttcaacacataccca-ttttcatacactttgaacat 143810  T
Q  128 gtgattcaactaacaacaattcaattatccataacttcataca 170  Q
    || ||||||||||| |||||||||||||  |||||||||||||    
T  143811 gtaattcaactaac-acaattcaattatttataacttcataca 143852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 30 - 170
Target Start/End: Original strand, 44865303 - 44865444
Alignment:
Q  30 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcat--actttgaacat 127  Q
    |||| |||||||||||||||||||||||  ||||| || |||||||||||||||||||||||||||||||| ||||| | || ||||  |||||||||||    
T  44865303 aattaatcatgaaacttatcacaattcatcaacaaaaatgcataattcaccaattgagcatattttcaacacataccca-ttttcatacactttgaacat 44865401  T
Q  128 gtgattcaactaacaacaattcaattatccataacttcataca 170  Q
    || ||||||| ||||||||||||||||| ||||||||||||||    
T  44865402 gtaattcaaccaacaacaattcaattattcataacttcataca 44865444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 16 - 167
Target Start/End: Complemental strand, 49047861 - 49047711
Alignment:
Q  16 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattca-ccaattgagcatattttcaacatataccaacttctc 114  Q
    |||||||||| || ||||||||||||| ||||||||||||||| ||||||| | ||||||||| |||||||||||||||| ||||||||||||   ||||    
T  49047861 caacaacaac-atcaattgatcatgaatcttatcacaattcaacaacaacataacataattcaaccaattgagcatattt-caacatataccactctctc 49047764  T
Q  115 atactttgaacatgtgattcaactaacaacaattcaattatccataacttcat 167  Q
    ||||||||||||||  |||  || |||||||||||||||||| | ||||||||    
T  49047763 atactttgaacatgaaatttcaccaacaacaattcaattatcaacaacttcat 49047711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 237 - 358
Target Start/End: Complemental strand, 26069525 - 26069403
Alignment:
Q  237 atgaattctaacccccttaccttagatagagtaatccct--agcttaggcttcaattttgctcctagctctcatcc-aatccttgattcttcaagttcct 333  Q
    ||||||||||||||| ||||||||| |||  ||||| ||  ||||||| ||||||||||||||||||||||  ||| || |||||||||||||||| |||    
T  26069525 atgaattctaacccc-ttaccttagttaggttaatctctctagcttagacttcaattttgctcctagctcttctcccaacccttgattcttcaagt-cct 26069428  T
Q  334 cttctctctaacccttttctccttt 358  Q
    |||||||||||||||||||||||||    
T  26069427 cttctctctaacccttttctccttt 26069403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 31 - 170
Target Start/End: Original strand, 35094890 - 35095028
Alignment:
Q  31 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttca-acatataccaacttctcatactttgaacatgt 129  Q
    |||||||||||||| | | ||||||||  |||||||  ||||||||||||||||||||||||||||| |||||  |||  |||  |||||||||||||||    
T  35094890 attgatcatgaaacatttaacaattcatcaacaacagtgcataattcaccaattgagcatattttcacacata-cccattttcatatactttgaacatgt 35094988  T
Q  130 gattcaactaacaacaattcaattatccataacttcataca 170  Q
     ||||||||||| |||||||||| || ||||||||||||||    
T  35094989 aattcaactaac-acaattcaatcattcataacttcataca 35095028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 168 - 260
Target Start/End: Complemental strand, 7284047 - 7283956
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttacctta 260  Q
    |||||| ||||||||| |||||||||||||| |||||  |||||||||||||| ||| ||||||||||||||||  |||||||||||||||||    
T  7284047 acaattaatcaattcatccaattaagcacttatcatataaataattgaaaattacaa-aagtgattatgatgaaaactaacccccttacctta 7283956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 167
Target Start/End: Original strand, 13377589 - 13377739
Alignment:
Q  16 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaatt-gagcatattttcaacatataccaacttctc 114  Q
    |||||||||| || |||||| |||||| ||||||||||||||| ||||||| ||||||||| | ||||| ||| ||| || ||||||||| ||  |||||    
T  13377589 caacaacaac-atcaattgaacatgaatcttatcacaattcaacaacaacatagcataattaatcaatttgagtataatt-caacatatatcactttctc 13377686  T
Q  115 atactttgaacatgtgattcaactaacaacaattcaattatccataacttcat 167  Q
    ||||||||||||||  |||  || |||||||||||||||||| | ||||||||    
T  13377687 atactttgaacatgaaatttcaccaacaacaattcaattatcaacaacttcat 13377739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 30 - 170
Target Start/End: Complemental strand, 39046797 - 39046662
Alignment:
Q  30 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatgt 129  Q
    ||||||||||||||| ||||||||||||  |||||||| ||||||||||||||||||| |||||||| ||||||||  | || |||    ||||||||      
T  39046797 aattgatcatgaaacatatcacaattcatcaacaacaatgcataattcaccaattgag-atattttc-acatatactcatttttca---attgaacatac 39046703  T
Q  130 gattcaactaacaacaattcaattatccataacttcataca 170  Q
     ||||||||||||| |||||||| || ||||||||||||||    
T  39046702 aattcaactaacaataattcaatcattcataacttcataca 39046662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 3049657 - 3049717
Alignment:
Q  31 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 91  Q
    |||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||    
T  3049657 attgatcatgaaacttatcacaattcatcaacaacatagcataattcaccaattgagcata 3049717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 16 - 165
Target Start/End: Complemental strand, 17224125 - 17223977
Alignment:
Q  16 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaatt-gagcatattttcaacatataccaacttctc 114  Q
    |||||||||| || |||||| |||||  ||||  ||||||||| ||||||| ||||||||||| ||||| ||| ||| || ||||||||| ||  |||||    
T  17224125 caacaacaac-atcaattgaacatgactcttacaacaattcaacaacaacatagcataattcaacaatttgagtataatt-caacatatatcactttctc 17224028  T
Q  115 atactttgaacatgtgattcaactaacaacaattcaattatccataacttc 165  Q
    ||||||||||||||  |||  || |||||||||||||||||||| ||||||    
T  17224027 atactttgaacatgaaatttcacaaacaacaattcaattatccacaacttc 17223977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 16 - 154
Target Start/End: Original strand, 13274847 - 13274974
Alignment:
Q  16 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattca-ccaattgagcatattttcaacatataccaacttctc 114  Q
    |||||||||| || ||||||||||||| ||||||||||||||| ||||||| ||||||||||| ||||||||||||||           ||||  |||||    
T  13274847 caacaacaac-atcaattgatcatgaatcttatcacaattcaacaacaacatagcataattcaaccaattgagcatat-----------accactttctc 13274934  T
Q  115 atactttgaacatgtgattcaactaacaacaattcaatta 154  Q
    ||||||||||||||  |||  |||||||||||||||||||    
T  13274935 atactttgaacatgaaattttactaacaacaattcaatta 13274974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 111450 - 111390
Alignment:
Q  31 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 91  Q
    |||||||||||||| ||||||||||||  |||||| | |||||||||||||||||||||||    
T  111450 attgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 111390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 126489 - 126549
Alignment:
Q  31 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 91  Q
    |||||||||||||| ||||||||||||  |||||| | |||||||||||||||||||||||    
T  126489 attgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 126549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 2028995 - 2029055
Alignment:
Q  31 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 91  Q
    |||||||||||||||||||||||||||  |||||  | |||||||||||||||||||||||    
T  2028995 attgatcatgaaacttatcacaattcatcaacaatcatgcataattcaccaattgagcata 2029055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 2190367 - 2190307
Alignment:
Q  31 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 91  Q
    |||||||||||||| ||||||||||||  |||||| | |||||||||||||||||||||||    
T  2190367 attgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 2190307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 229 - 351
Target Start/End: Original strand, 13377852 - 13377976
Alignment:
Q  229 tgattatgatgaattctaacccccttaccttagata-gagtaatccctagcttaggcttcaattttgctcct-agctctcatccaatccttgattcttca 326  Q
    ||||||||||||||||||||||||||||||||  ||  |  ||| ||||||  | |||||| ||| |||||| || |||| |||||| ||| | ||||||    
T  13377852 tgattatgatgaattctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctcctaagatctcttccaattcttaaatcttca 13377951  T
Q  327 agttcctcttctctctaaccctttt 351  Q
    || ||||||||||||||||||||||    
T  13377952 agctcctcttctctctaaccctttt 13377976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 42056470 - 42056410
Alignment:
Q  31 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 91  Q
    |||||||||||||| ||||||||||||  |||||| | |||||||||||||||||||||||    
T  42056470 attgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 42056410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 229 - 331
Target Start/End: Complemental strand, 11580692 - 11580589
Alignment:
Q  229 tgattatgatgaattctaacccccttaccttagat--agagtaatccctagcttaggcttcaattttgctccta-gctctcatccaatccttgattcttc 325  Q
    |||||||||| ||  |||| |||||||||||||||  ||| ||||||| | ||||||||||||||| ||||||| |||| | ||||||||||||||||||    
T  11580692 tgattatgataaagactaatccccttaccttagattaagattaatcccaa-cttaggcttcaatttagctcctaagctcac-tccaatccttgattcttc 11580595  T
Q  326 aagttc 331  Q
    ||||||    
T  11580594 aagttc 11580589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 229 - 331
Target Start/End: Complemental strand, 13036969 - 13036866
Alignment:
Q  229 tgattatgatgaattctaacccccttaccttagatagag--taatccctagcttaggcttcaattttgctccta-gctctcatccaatccttgattcttc 325  Q
    |||||||| ||||  ||||||||||||||||||||| ||  ||||||| | ||||||||||||||| ||||||| |||  | ||||||||||||||||||    
T  13036969 tgattatggtgaagactaacccccttaccttagataaagattaatcccaa-cttaggcttcaatttagctcctaagcttac-tccaatccttgattcttc 13036872  T
Q  326 aagttc 331  Q
    ||||||    
T  13036871 aagttc 13036866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 156
Target Start/End: Original strand, 9838939 - 9839078
Alignment:
Q  16 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaatt-gagcatattttcaacatataccaacttctc 114  Q
    |||||||||| || |||||| |||||| || |||| ||||||| ||||||| |||| |||||| || || ||||||| || ||||||||| ||  ||| |    
T  9838939 caacaacaac-atcaattgaacatgaatctcatcataattcaacaacaacatagcacaattcaacatttagagcataatt-caacatataacactttcac 9839036  T
Q  115 atactttgaacatgtgattcaactaacaacaattcaattatc 156  Q
    ||||||||||||||  |||  || ||||||||||||||||||    
T  9839037 atactttgaacatgcaatttcaccaacaacaattcaattatc 9839078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 128
Target Start/End: Original strand, 16919646 - 16919730
Alignment:
Q  44 cttatcacaattcaataacaacaaagcataattcaccaa-ttgagcatattttcaacatataccaacttctcatactttgaacatg 128  Q
    ||||||||||||||| ||||||| ||||||||||| ||| |||||||||  ||||||||||| ||  |||||||| ||||||||||    
T  16919646 cttatcacaattcaacaacaacatagcataattcatcaatttgagcata-attcaacatatatcactttctcatattttgaacatg 16919730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 35 - 91
Target Start/End: Complemental strand, 32494223 - 32494167
Alignment:
Q  35 atcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 91  Q
    |||||||||| ||||||||||||  |||||| | |||||||||||||||||||||||    
T  32494223 atcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 32494167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 229 - 349
Target Start/End: Original strand, 16212072 - 16212195
Alignment:
Q  229 tgattatgatgaattctaacccccttaccttagat--agagtaatccctagcttaggcttcaattttgctcct-agctctcatccaatccttgattcttc 325  Q
    |||||||||| ||  ||||||||||||||||||||  ||| ||||||| | ||||||||||||||| |||||| ||||| | |||||| |||||||||||    
T  16212072 tgattatgataaagactaacccccttaccttagatgaagattaatccc-aacttaggcttcaatttagctcctaagctcac-tccaat-cttgattcttc 16212168  T
Q  326 aa---gttcctcttctctctaaccctt 349  Q
    ||    | |||||||||||||||||||    
T  16212169 aaactctccctcttctctctaaccctt 16212195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 16 - 156
Target Start/End: Original strand, 48356704 - 48356843
Alignment:
Q  16 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaatt-gagcatattttcaacatataccaacttctc 114  Q
    |||||||||| || |||||| |||||| || |||| ||||||| ||||||| | || |||||| || || ||||||| || ||||||||| ||  ||| |    
T  48356704 caacaacaac-atcaattgaacatgaatctcatcataattcaacaacaacataacacaattcaacatttagagcataatt-caacatataacactttcac 48356801  T
Q  115 atactttgaacatgtgattcaactaacaacaattcaattatc 156  Q
    ||||||||||||||  |||  || ||||||||||||||||||    
T  48356802 atactttgaacatgcaatttcaccaacaacaattcaattatc 48356843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 319 - 349
Target Start/End: Complemental strand, 111108 - 111078
Alignment:
Q  319 attcttcaagttcctcttctctctaaccctt 349  Q
    |||||||||||||||||||||||||||||||    
T  111108 attcttcaagttcctcttctctctaaccctt 111078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 319 - 349
Target Start/End: Original strand, 126831 - 126861
Alignment:
Q  319 attcttcaagttcctcttctctctaaccctt 349  Q
    |||||||||||||||||||||||||||||||    
T  126831 attcttcaagttcctcttctctctaaccctt 126861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 319 - 349
Target Start/End: Original strand, 3060364 - 3060394
Alignment:
Q  319 attcttcaagttcctcttctctctaaccctt 349  Q
    |||||||||||||||||||||||||||||||    
T  3060364 attcttcaagttcctcttctctctaaccctt 3060394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 319 - 349
Target Start/End: Complemental strand, 7283895 - 7283865
Alignment:
Q  319 attcttcaagttcctcttctctctaaccctt 349  Q
    |||||||||||||||||||||||||||||||    
T  7283895 attcttcaagttcctcttctctctaaccctt 7283865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 346
Target Start/End: Original strand, 36052972 - 36053092
Alignment:
Q  229 tgattatgatgaattctaacccccttaccttagat--agagtaatccctagcttaggcttcaattttgctcct-agctctcatccaatccttgattcttc 325  Q
    |||||||||| ||  ||||||||||||||||||||  ||| ||||||| | ||||||||||| ||| |||||| ||||| | |||||| |||||||||||    
T  36052972 tgattatgataaagactaacccccttaccttagataaagattaatccc-aacttaggcttcactttagctcctaagctcac-tccaat-cttgattcttc 36053068  T
Q  326 aag---ttcctcttctctctaacc 346  Q
    |||   | ||||||||||||||||    
T  36053069 aagctctccctcttctctctaacc 36053092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 264
Target Start/End: Original strand, 25124437 - 25124486
Alignment:
Q  215 aaaattgcaataagtgattatgatgaattctaacccccttaccttagata 264  Q
    |||||| || ||| |||||||||||||  |||||||||||||||||||||    
T  25124437 aaaattacactaaatgattatgatgaagactaacccccttaccttagata 25124486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 351
Target Start/End: Complemental strand, 17223785 - 17223737
Alignment:
Q  303 tctcatccaatccttgattcttcaagttcctcttctctctaaccctttt 351  Q
    |||| |||||| ||||| | ||||||||| |||||||||||||||||||    
T  17223785 tctcttccaattcttgaattttcaagttcttcttctctctaaccctttt 17223737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0396 (Bit Score: 121; Significance: 6e-62; HSPs: 2)
Name: scaffold0396
Description:

Target: scaffold0396; HSP #1
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 168 - 349
Target Start/End: Complemental strand, 11695 - 11512
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagatagag 267  Q
    |||||| ||||||||| |||||||||||||| |||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||     
T  11695 acaattaatcaattcatccaattaagcacttatcatacaaataattgaaaattacaataagtgattatgatgaattctaacccccttagcttagttagat 11596  T
Q  268 taa--tccctagcttaggcttcaattttgctcctagctctcatccaatccttgattcttcaagttcctcttctctctaaccctt 349  Q
    |||  |||||||||||||||||||||||| |||||||||    |||||||||||||||||||||||||||||||||||||||||    
T  11595 taatctccctagcttaggcttcaattttgttcctagctcaaccccaatccttgattcttcaagttcctcttctctctaaccctt 11512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0396; HSP #2
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 16 - 170
Target Start/End: Complemental strand, 11895 - 11742
Alignment:
Q  16 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctca 115  Q
    |||||||||| || ||||||||||||||||||||| ||||||  |||||||| |||||||||||||||||||||||||||||||  ||||| | || |||    
T  11895 caacaacaac-atcaattgatcatgaaacttatcaaaattcatcaacaacaatgcataattcaccaattgagcatattttcaactaatacccatttttca 11797  T
Q  116 tactttgaacatgtgattcaactaacaacaattcaattatccataacttcataca 170  Q
    |||||||||||||| ||||| | ||||||||||||||||| ||||||||||||||    
T  11796 tactttgaacatgtaattcatccaacaacaattcaattattcataacttcataca 11742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 121; Significance: 6e-62; HSPs: 55)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 168 - 352
Target Start/End: Original strand, 28974309 - 28974494
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaa-ttgcaataagtgattatgatgaattctaacccccttaccttagataga 266  Q
    |||||| ||||||||||| ||||||||||||||||||| |||||||||||| ||| ||||| ||||||||||||||||||||||||||||||||| ||||    
T  28974309 acaattaatcaattcaccaaattaagcacttttcatac-aataattgaaaaattgaaataa-tgattatgatgaattctaacccccttaccttagttaga 28974406  T
Q  267 gtaatc--cctagcttaggcttcaattttgctcctagctctcatccaatccttgattcttcaagttcctcttctctctaacccttttc 352  Q
     |||||  |||||||||| |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  28974407 ttaatctccctagcttagacttcaattttgctcctagctctctcccaatccttgattcttcaagttcctcttctctctaacccttttc 28974494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 168 - 346
Target Start/End: Original strand, 25602284 - 25602466
Alignment:
Q  168 acaatttatcaattcacccaattaagcactt-ttcataccaataattgaaaa-ttgcaataagtgattatgatgaattctaacccccttaccttagatag 265  Q
    |||||| |||||||||||||||||||||||| ||||||| |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| |||    
T  25602284 acaattaatcaattcacccaattaagcacttattcatac-aataattgaaaaattgcaataaatgattatgatgaattctaacccccttaccttagttag 25602382  T
Q  266 agtaa--tccctagcttaggcttcaattttgctcctagctc-tcatccaatccttgattcttcaagttcctcttctctctaacc 346  Q
    | |||  ||||||||||||||||||||||||||| |||||| ||  ||||||||||||||||||||||||||||||||||||||    
T  25602383 attaatctccctagcttaggcttcaattttgctcatagctcttcccccaatccttgattcttcaagttcctcttctctctaacc 25602466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 168 - 349
Target Start/End: Original strand, 27262063 - 27262247
Alignment:
Q  168 acaatttatcaattcacccaattaagcactt-ttcataccaataattgaaaa-ttgcaataagtgattatgatgaattctaacccccttaccttagatag 265  Q
    |||||| ||||||||| |||||||||||||| ||||||| |||||||||||| ||||||||| |||||||||||||||||||| |||||||||||| |||    
T  27262063 acaattaatcaattcatccaattaagcacttattcatac-aataattgaaaaattgcaataaatgattatgatgaattctaactcccttaccttagttag 27262161  T
Q  266 agtaatc--cctagcttaggcttcaattttgctcctagctctcatccaatccttgattcttcaagttcctcttctctctaaccctt 349  Q
    | |||||  |||||||||||||||||||| |||||||||| ||  |||||||||||||||||||||||||||||||||||||||||    
T  27262162 attaatctccctagcttaggcttcaatttagctcctagctttcccccaatccttgattcttcaagttcctcttctctctaaccctt 27262247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 15 - 170
Target Start/End: Original strand, 271229 - 271383
Alignment:
Q  15 tcaacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctc 114  Q
    ||||||||||| || ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| ||||| | |||      
T  271229 tcaacaacaac-atcaattgatcatgaaacttatcacaattcaacaacaacaaaacataattcaccaattgagcatattttcaacacatacccatttcat 271327  T
Q  115 atactttgaacatgtgattcaactaacaacaattcaattatccataacttcataca 170  Q
    | ||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  271328 acactttgaacatgtaattcaactaacaacaattcaattatccataacttcataca 271383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 168 - 356
Target Start/End: Complemental strand, 4448120 - 4447932
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaa-ttgcaataagtgattatgatgaattctaacccccttaccttagataga 266  Q
    |||||| |||||||||| |||||||||||||||||||  |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  4448120 acaattaatcaattcactcaattaagcacttttcatataaataattgaaaaattgcaataa-tgattatgatgaattctaacccccttaccttagttaga 4448022  T
Q  267 gtaa--tccctagcttaggcttcaattttgctcctagctctcatccaatccttgattcttcaagttcctcttctctctaacccttttctcct 356  Q
     |||  ||||||| |||||||||||||||||| ||||||||| | ||  ||||||||||||||| |||||||||||||||||||||||||||    
T  4448021 ttaatctccctagtttaggcttcaattttgcttctagctctc-ttcaccccttgattcttcaag-tcctcttctctctaacccttttctcct 4447932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 30 - 170
Target Start/End: Complemental strand, 36890859 - 36890719
Alignment:
Q  30 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatgt 129  Q
    |||||||||||||||||||||||||| |  ||||||| ||||||||||||||||| |||||||||||||||||| |||  ||||||||||||||||||||    
T  36890859 aattgatcatgaaacttatcacaatttatcaacaacatagcataattcaccaattaagcatattttcaacatattccattttctcatactttgaacatgt 36890760  T
Q  130 gattcaactaacaacaattcaattatccataacttcataca 170  Q
     ||||||||||||||||||||||||||||||||||||||||    
T  36890759 aattcaactaacaacaattcaattatccataacttcataca 36890719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 16 - 170
Target Start/End: Original strand, 25602084 - 25602237
Alignment:
Q  16 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctca 115  Q
    |||||||||| || ||||||||||||||||||||||||||||  ||| ||| ||||||| ||||||||||||||||||||||||||||| ||| ||||||    
T  25602084 caacaacaac-atcaattgatcatgaaacttatcacaattcatcaaccacatagcataactcaccaattgagcatattttcaacatatatcaatttctca 25602182  T
Q  116 tactttgaacatgtgattcaactaacaacaattcaattatccataacttcataca 170  Q
    |||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||    
T  25602183 tactttgaacatgtaattcaaccaacaacaattcaattattcataacttcataca 25602237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 170 - 356
Target Start/End: Original strand, 271432 - 271617
Alignment:
Q  170 aatttatcaattcacccaattaagcacttttcataccaataattgaaaa-ttgcaataagtgattatgatgaattctaacccccttaccttagatagagt 268  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| |||  |    
T  271432 aattaatcaattcacccaattaagcacttttcatac-aataattgaaaaattgcaataa-tgattatgatgaattctaacccccttaccttagttaggtt 271529  T
Q  269 aa--tccctagcttaggcttcaattttgctcctagctctcatccaatccttgattcttcaagttcctcttctctctaacccttttctcct 356  Q
    ||  ||| |||||||||||||||||||||||||||||||| | ||  | ||||||||||||| ||||||||||||||||| |||||||||    
T  271530 aatctccttagcttaggcttcaattttgctcctagctctc-ttcaccctttgattcttcaag-tcctcttctctctaaccattttctcct 271617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 16 - 170
Target Start/End: Original strand, 28974109 - 28974262
Alignment:
Q  16 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctca 115  Q
    |||||||||| || |||||||||||||||||| |||||||||  ||||||| |||||||||| |||| ||||||||||||||||||||||||  ||||||    
T  28974109 caacaacaac-atcaattgatcatgaaacttaccacaattcatcaacaacatagcataattcgccaaatgagcatattttcaacatataccattttctca 28974207  T
Q  116 tactttgaacatgtgattcaactaacaacaattcaattatccataacttcataca 170  Q
    |||||||||||||| |||||| |||||||||||| ||||||||||||||||||||    
T  28974208 tactttgaacatgtaattcaattaacaacaattctattatccataacttcataca 28974262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 15 - 170
Target Start/End: Complemental strand, 4448321 - 4448167
Alignment:
Q  15 tcaacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctc 114  Q
    ||||||||||| || ||||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||| ||||||||||||| | ||| | |||      
T  4448321 tcaacaacaac-atcaattgatcatgaaacttatcataattcaacaacaacaaagcatcattcaccaattgaacatattttcaacacaaacccatttcat 4448223  T
Q  115 atactttgaacatgtgattcaactaacaacaattcaattatccataacttcataca 170  Q
    | ||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  4448222 acactttgaacatgtaattcaactaacaacaattcaattatccataacttcataca 4448167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 168 - 346
Target Start/End: Complemental strand, 36890672 - 36890493
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagatagag 267  Q
    |||||| |||||||||||||| |||||||||||||||||| |||||||||||  |||||||||||||||||||||||||||||||||||||||| |||      
T  36890672 acaattaatcaattcacccaaataagcacttttcatacca-taattgaaaataacaataagtgattatgatgaattctaacccccttaccttagttaggt 36890574  T
Q  268 taatccc--tagcttaggcttcaattttgctcctagctc-tcatccaatccttgattcttcaagttcctcttctctctaacc 346  Q
    ||||| |  |||||||||||||||||||||| ||||||| ||  |||| | ||||||||||||| |||||||||||||||||    
T  36890573 taatctctatagcttaggcttcaattttgctgctagctcttctcccaacctttgattcttcaag-tcctcttctctctaacc 36890493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 168 - 356
Target Start/End: Complemental strand, 25875907 - 25875721
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagatagag 267  Q
    |||||| ||||||||| |||||||| ||||| |||||| |||||||||||||| ||| |||||||||||||||||||||||||||||||||||| |||      
T  25875907 acaattaatcaattcatccaattaaacacttatcatacaaataattgaaaattacaa-aagtgattatgatgaattctaacccccttaccttag-taggt 25875810  T
Q  268 taa--tccctagcttaggcttcaattttgctcctagctctcatccaatccttgattcttcaagttcctcttctctctaacccttttctcct 356  Q
    |||  ||||||||||||||||||||||||||| ||||||| ||   |  |||||||||||||| |||||||||||||||||||||||||||    
T  25875809 taatctccctagcttaggcttcaattttgctcgtagctct-atatcactcttgattcttcaag-tcctcttctctctaacccttttctcct 25875721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 168 - 346
Target Start/End: Complemental strand, 22579849 - 22579671
Alignment:
Q  168 acaatttatcaattcacccaattaagcactt-ttcataccaataattgaaaa-ttgcaataagtgattatgatgaattctaacccccttaccttagatag 265  Q
    |||||| ||||||| || ||||||||||||| ||||||| |||||||||||| |||||||| |||||||||||||||||||||||||||||||||| ||     
T  22579849 acaattaatcaatt-acacaattaagcacttattcatac-aataattgaaaaattgcaata-gtgattatgatgaattctaacccccttaccttagttaa 22579753  T
Q  266 agtaatc--cctagcttaggcttcaattttgctcctagctctcatccaatccttgattcttcaagttcctcttctctctaacc 346  Q
    | |||||  |||||||||||||||||||| ||||||||||||| |||||| |||||||||||||||||| |||||| ||||||    
T  22579752 attaatctccctagcttaggcttcaatttagctcctagctctcttccaat-cttgattcttcaagttccccttctccctaacc 22579671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 168 - 361
Target Start/End: Complemental strand, 24571279 - 24571084
Alignment:
Q  168 acaatttatcaattcacccaattaagcactt-ttcataccaataattgaaa-attgcaataagtgattatgatgaattctaacccccttaccttagatag 265  Q
    |||||| ||||||| ||||||||||||| || ||||||| ||||||||||| |||||||||| ||||||||||||||||||||||||| ||||||| |||    
T  24571279 acaattaatcaatt-acccaattaagcatttattcatac-aataattgaaacattgcaataa-tgattatgatgaattctaaccccctaaccttagttag 24571183  T
Q  266 agtaatc--cctagcttaggcttcaattttgctcctagctctcatccaatccttgattcttcaagtt-cctcttctctctaacccttttctcctttgct 361  Q
    | |||||  |||| ||||  ||||||||| ||||||||||||| ||||||  ||||||||||||||| || |||||||||||||||||||  |||||||    
T  24571182 attaatctccctatcttaaacttcaatttagctcctagctctcttccaatttttgattcttcaagttcccccttctctctaacccttttcctctttgct 24571084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 68 - 170
Target Start/End: Original strand, 27261915 - 27262016
Alignment:
Q  68 agcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatgtgattcaactaacaacaattcaattatccataacttcat 167  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||    
T  27261915 agcataattcaccaat-gagcatattttcaacatataccaatttctcatactttgaacatgtaattgaactaacaacaattcaattatccataactttat 27262013  T
Q  168 aca 170  Q
    |||    
T  27262014 aca 27262016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 16 - 170
Target Start/End: Original strand, 32465918 - 32466070
Alignment:
Q  16 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctca 115  Q
    |||||||||| || ||||||||||||||||||||||||||||  || ||||| |||||||||||||||||||||||||||| ||| ||| | | || |||    
T  32465918 caacaacaac-atcaattgatcatgaaacttatcacaattcatcaagaacaatgcataattcaccaattgagcatattttc-acacatatccatttttca 32466015  T
Q  116 tactttgaacatgtgattcaactaacaacaattcaattatccataacttcataca 170  Q
    ||||||||||||   |||||||||||||||||||||| || ||||||||||||||    
T  32466016 tactttgaacatacaattcaactaacaacaattcaatcattcataacttcataca 32466070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 225 - 361
Target Start/End: Original strand, 7321837 - 7321974
Alignment:
Q  225 taagtgattatgatgaattctaacccccttaccttagatagagtaat-ccctagcttaggcttcaattttgctcctagctctcatccaatccttgattct 323  Q
    ||||||||||| ||||||||||||||||||||||||| |||| |||| ||| |||| |  ||||||||| |||||||| |||| |||||||||||| |||    
T  7321837 taagtgattataatgaattctaacccccttaccttagttagattaattcccaagctcaaacttcaatttagctcctagatctcttccaatccttgaatct 7321936  T
Q  324 tcaagttcctcttctctctaacccttttctcctttgct 361  Q
    |||||||||||||||||||||||||||||  |||||||    
T  7321937 tcaagttcctcttctctctaacccttttcctctttgct 7321974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 168 - 356
Target Start/End: Complemental strand, 23836692 - 23836507
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagatagag 267  Q
    |||||| ||||||||| | |||||||||||| |||| | |||||||||||||| ||| |||||||||||||||||||||||||||||||||||| ||       
T  23836692 acaattaatcaattcatctaattaagcacttatcattcaaataattgaaaattacaa-aagtgattatgatgaattctaacccccttaccttag-tatgt 23836595  T
Q  268 taatc-cct-agcttaggcttcaattttgctcctagctctc-atccaatccttgattcttcaagttcctcttctctctaacccttttctcct 356  Q
    ||||| ||| ||||||||||||||||||||||||||||||| |||  | ||||||||||||||||  ||||||||||||||| || ||||||    
T  23836594 taatctcctaagcttaggcttcaattttgctcctagctctctatc--acccttgattcttcaagt--ctcttctctctaaccattgtctcct 23836507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 229 - 351
Target Start/End: Complemental strand, 19669034 - 19668911
Alignment:
Q  229 tgattatgatgaattctaacccccttaccttagatagagtaat-ccctagcttaggcttcaattttgctcctagctctcatccaatccttgattcttcaa 327  Q
    ||||||||||||||||||||||| ||||||||| |||| |||| |||||||| | |||||| ||| ||||||||||||| | |||||||||| |||||||    
T  19669034 tgattatgatgaattctaaccccgttaccttagttagattaattccctagctcaagcttcactttagctcctagctctctttcaatccttgaatcttcaa 19668935  T
Q  328 gttcctcttctctctaaccctttt 351  Q
    ||||||||||||||||||||||||    
T  19668934 gttcctcttctctctaaccctttt 19668911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 210 - 356
Target Start/End: Original strand, 17367119 - 17367268
Alignment:
Q  210 aattgaaaattgcaataagtgattatgatgaattctaacccccttacct---tagatagagtaatcc-ctagcttaggcttcaattttgctcctagctc- 304  Q
    ||||||| ||| ||||||||||||||||||||||||||||| |||||||   ||| |||  |||| | |||||||||||||||||||||||| ||||||     
T  17367119 aattgaatattacaataagtgattatgatgaattctaaccctcttacctaattag-taggttaattctctagcttaggcttcaattttgctcgtagctct 17367217  T
Q  305 tcatccaatccttgattcttcaagttcctcttctctctaacccttttctcct 356  Q
    ||  |||| ||||||||||||||| |||||||||||||||||||||||||||    
T  17367218 tctcccaacccttgattcttcaag-tcctcttctctctaacccttttctcct 17367268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 30 - 170
Target Start/End: Complemental strand, 23836879 - 23836739
Alignment:
Q  30 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcat--actttgaacat 127  Q
    ||||||||||||||| ||||||||||||  |||||||| |||||||||||||||||||||||||||  ||| ||||| | || ||||  |||||||||||    
T  23836879 aattgatcatgaaacatatcacaattcatcaacaacaatgcataattcaccaattgagcatatttttcacacataccca-ttttcatacactttgaacat 23836781  T
Q  128 gtgattcaactaacaacaattcaattatccataacttcataca 170  Q
    || |||| |||||| |||||||||| || ||||||||||||||    
T  23836780 gtaattccactaac-acaattcaatcattcataacttcataca 23836739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 32 - 170
Target Start/End: Complemental strand, 25876091 - 25875954
Alignment:
Q  32 ttgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcat--actttgaacatgt 129  Q
    ||||||||||| | ||||||||||||  |||||||| |||||||||||||||||||||||||||| ||| ||||| | || ||||  |||||||||||||    
T  25876091 ttgatcatgaagcatatcacaattcatcaacaacaatgcataattcaccaattgagcatattttc-acacataccca-ttttcatacactttgaacatgt 25875994  T
Q  130 gattcaactaacaacaattcaattatccataacttcataca 170  Q
     ||||||||||| | ||||||||||| ||||||||||||||    
T  25875993 aattcaactaac-ataattcaattattcataacttcataca 25875954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 16 - 167
Target Start/End: Original strand, 68052 - 68202
Alignment:
Q  16 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaatt-gagcatattttcaacatataccaacttctc 114  Q
    |||||||||| || |||||| |||||| |||| |||||||||| ||||||| ||||||||||| ||||| |||||||||| ||||||||| ||  |||||    
T  68052 caacaacaac-atcaattgaacatgaatcttaccacaattcaacaacaacatagcataattcaacaatttgagcatattt-caacatatatcactttctc 68149  T
Q  115 atactttgaacatgtgattcaactaacaacaattcaattatccataacttcat 167  Q
    ||||||||||||||  |||  || |||||||||||||||||| | ||||||||    
T  68150 atactttgaacatgaaatttcaccaacaacaattcaattatcaacaacttcat 68202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 16 - 167
Target Start/End: Complemental strand, 24571479 - 24571329
Alignment:
Q  16 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattc-accaattgagcatattttcaacatataccaacttctc 114  Q
    |||||||||| || ||||||||||||| |||| |||||||||| || |||| |||||||||| |||||||||||||| |||||||||||| ||  |||||    
T  24571479 caacaacaac-atcaattgatcatgaatcttaacacaattcaacaaaaacatagcataattcaaccaattgagcata-tttcaacatatatcattttctc 24571382  T
Q  115 atactttgaacatgtgattcaactaacaacaattcaattatccataacttcat 167  Q
    |||| |||||||||  |||   ||||||||||||||| |||||| ||||||||    
T  24571381 ataccttgaacatgaaatttctctaacaacaattcaagtatccacaacttcat 24571329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 30 - 170
Target Start/End: Complemental strand, 22580033 - 22579896
Alignment:
Q  30 aattgatcatgaaacttatcacaattcaataacaacaaagcataattc-accaattgagcatattttcaacatatacca-acttctcatactttgaacat 127  Q
    |||||||||||||||||||||||||||   |||||||||||||||||| |||||||||||||| |||||||||||| ||   ||||||||| |||| |||    
T  22580033 aattgatcatgaaacttatcacaattc---aacaacaaagcataattcaaccaattgagcata-tttcaacatataacatttttctcataccttgatcat 22579938  T
Q  128 gtgattcaactaacaacaattcaattatccataacttcataca 170  Q
        ||  || ||||||||||||||||| ||||||||||||||    
T  22579937 aaagtttcaccaacaacaattcaattat-cataacttcataca 22579896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 229 - 350
Target Start/End: Original strand, 68315 - 68436
Alignment:
Q  229 tgattatgatgaattctaacccccttaccttagatagagtaa-tccctagcttaggcttcaattttgctcctagctctcatccaatccttgattcttcaa 327  Q
    ||||||||||||||||||||||||||||||||| || | ||| ||||||||| | |||||| ||| ||| |||| |||| |||||  ||||| |||||||    
T  68315 tgattatgatgaattctaacccccttaccttagttatattaattccctagctcaagcttcactttagcttctaggtctc-tccaactcttgaatcttcaa 68413  T
Q  328 gttcctcttctctctaacccttt 350  Q
      || ||||||||||||||||||    
T  68414 cctcatcttctctctaacccttt 68436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 229 - 349
Target Start/End: Complemental strand, 3171 - 3050
Alignment:
Q  229 tgattatgatgaattctaacccccttaccttagatagagtaa-tccctagcttaggcttcaattttgctccta-gctctcatccaatccttgattcttca 326  Q
    ||||||||||||||||||||||||||||||||| ||||  || ||||||||  | |||||| ||| ||||||| | |||| | |  | ||||| ||||||    
T  3171 tgattatgatgaattctaacccccttaccttagttagatcaattccctagcccaagcttcactttagctcctaggttctc-ttctcttcttgaatcttca 3073  T
Q  327 agttcctcttctctctaaccctt 349  Q
    |||||||||||||||||||||||    
T  3072 agttcctcttctctctaaccctt 3050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 167
Target Start/End: Complemental strand, 31146354 - 31146218
Alignment:
Q  30 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaatt-gagcatattttcaacatataccaacttctcatactttgaacatg 128  Q
    |||||| || ||| ||||| ||||||||| |||| || ||||||||||| ||||| |||||||||| ||||||||| ||  ||||||||||||||||||     
T  31146354 aattgaacaggaatcttattacaattcaacaaca-catagcataattcaacaatttgagcatattt-caacatatatcactttctcatactttgaacata 31146257  T
Q  129 tgattcaactaacaacaattcaattatccataacttcat 167  Q
      |||   |||||||||||||||||||| | ||||||||    
T  31146256 aaatttctctaacaacaattcaattatcaacaacttcat 31146218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 186 - 261
Target Start/End: Original strand, 722668 - 722743
Alignment:
Q  186 caattaagcactt-ttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttag 261  Q
    ||||||||||||| ||||||| || ||||| |||||||| ||| ||||||||||||||||||||||| |||||||||    
T  722668 caattaagcacttattcatac-aacaattgcaaattgcactaaatgattatgatgaattctaacccctttaccttag 722743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 167
Target Start/End: Original strand, 43645953 - 43646103
Alignment:
Q  16 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaatt-gagcatattttcaacatataccaacttctc 114  Q
    |||||||||| || |||||| |||||  |||| |||| ||||| ||||||| ||||||||||| ||||| ||||||| || ||||||||| ||  |||||    
T  43645953 caacaacaac-atcaattgaacatgattcttaccacagttcaacaacaacatagcataattcaacaatttgagcataatt-caacatatatcactttctc 43646050  T
Q  115 atactttgaacatgtgattcaactaacaacaattcaattatccataacttcat 167  Q
    ||||||| ||||||  |||  || ||||||||| |||||||| | ||||||||    
T  43646051 atactttaaacatgaaatttcaccaacaacaatccaattatcaacaacttcat 43646103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 97
Target Start/End: Original strand, 6879510 - 6879577
Alignment:
Q  30 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttca 97  Q
    |||||||||| |||| ||||||||||||  || ||||| ||||||||||||||||||| |||||||||    
T  6879510 aattgatcattaaacatatcacaattcatcaataacaatgcataattcaccaattgagtatattttca 6879577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 186 - 260
Target Start/End: Original strand, 19666805 - 19666880
Alignment:
Q  186 caattaagcactt-ttcataccaataattgaaaa-ttgcaataagtgattatgatgaattctaacccccttacctta 260  Q
    |||||||||| || ||||||| |||||||||||| || || ||| ||||||||||||||||||||||||||||||||    
T  19666805 caattaagcatttattcatac-aataattgaaaaattacactaaatgattatgatgaattctaacccccttacctta 19666880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 22274796 - 22274856
Alignment:
Q  31 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 91  Q
    ||||||||||||||  |||||||||||  |||||| | |||||||||||||||||||||||    
T  22274796 attgatcatgaaacacatcacaattcatcaacaaccatgcataattcaccaattgagcata 22274856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 22284029 - 22284089
Alignment:
Q  31 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 91  Q
    ||||||||||||||  |||||||||||  |||||| | |||||||||||||||||||||||    
T  22284029 attgatcatgaaacacatcacaattcatcaacaaccatgcataattcaccaattgagcata 22284089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 229 - 349
Target Start/End: Complemental strand, 24294447 - 24294326
Alignment:
Q  229 tgattatgatgaattctaacccccttaccttagatagagtaa-tccctagcttaggcttcaattttgctcctag---ctctcatccaatccttgattctt 324  Q
    ||||||||||||| | ||||||||||||||||| ||||  || ||||||||| |  ||||||||| ||||||||   ||||| |||    ||||| ||||    
T  24294447 tgattatgatgaactttaacccccttaccttagttagatcaattccctagctcaaacttcaatttagctcctaggttctctcctcc---tcttgaatctt 24294351  T
Q  325 caagttcctcttctctctaaccctt 349  Q
    |||| ||||||||||||||||||||    
T  24294350 caagctcctcttctctctaaccctt 24294326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 168 - 331
Target Start/End: Original strand, 32466117 - 32466278
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagat-aga 266  Q
    |||||| |||||||||  ||| ||||||||| || ||| ||||||| ||| || ||| ||||||||||||||||  |||| ||||||||||||||| ||     
T  32466117 acaattaatcaattcattcaaataagcacttatcgtacaaataattaaaattttcaa-aagtgattatgatgaagactaa-ccccttaccttagataagg 32466214  T
Q  267 gtaatccctagcttaggcttcaattttgctcctagctctcatccaatccttgattcttcaagttc 331  Q
     | | ||| | ||||||||||||||| |||||||   |||| ||||| |||| ||||||||||||    
T  32466215 atcaacccaaacttaggcttcaatttagctccta-agctcacccaattcttggttcttcaagttc 32466278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 229 - 350
Target Start/End: Complemental strand, 31146104 - 31145982
Alignment:
Q  229 tgattatgatgaattctaacccccttaccttagatagagtaa-tccctagcttaggcttcaattttgctccta-gctctcatccaatccttgattcttca 326  Q
    ||||||||||||||||||||||||||||||||| ||||  || || |||||  | |||||| ||| ||||||| | |||| |||  | ||||| ||||||    
T  31146104 tgattatgatgaattctaacccccttaccttagttagatcaattctctagcccaagcttcactttagctcctaggttctc-tcctcttcttgaatcttca 31146006  T
Q  327 agttcctcttctctctaacccttt 350  Q
    || |||| ||||||||||||||||    
T  31146005 agctcctgttctctctaacccttt 31145982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 349
Target Start/End: Complemental strand, 9652827 - 9652709
Alignment:
Q  229 tgattatgatgaattctaacccccttaccttagat--agagtaatccctagcttaggcttcaattttgctcctagctctca-tccaatccttgattcttc 325  Q
    |||||||||| ||  ||||||||||||||||||||  ||| ||||||| | |||||| |||||||| |||||||  | ||| |||||||||| |||||||    
T  9652827 tgattatgataaagactaacccccttaccttagatgaagattaatcccaa-cttaggtttcaatttagctcctaagt-tcactccaatccttaattcttc 9652730  T
Q  326 aagttcctcttctctctaaccctt 349  Q
    ||||   |||||||||||||||||    
T  9652729 aagt---tcttctctctaaccctt 9652709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 256
Target Start/End: Original strand, 17366958 - 17367000
Alignment:
Q  214 gaaaattgcaataagtgattatgatgaattctaacccccttac 256  Q
    ||||||| ||||||||||||||||| |||||||||||||||||    
T  17366958 gaaaattacaataagtgattatgattaattctaacccccttac 17367000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 331
Target Start/End: Original strand, 22863236 - 22863339
Alignment:
Q  229 tgattatgatgaattctaacccccttaccttagat--agagtaatccctagcttaggcttcaattttgctcct-agctctcatccaatccttgattcttc 325  Q
    |||||||||| ||  ||||||||||||||||||||  ||| ||||||| | |||||||| |||||| |||||| ||||| |  |||||||||||||||||    
T  22863236 tgattatgataaagactaacccccttaccttagataaagattaatccc-aacttaggctgcaatttagctcctaagctcac-cccaatccttgattcttc 22863333  T
Q  326 aagttc 331  Q
    ||||||    
T  22863334 aagttc 22863339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 206 - 301
Target Start/End: Complemental strand, 23821589 - 23821492
Alignment:
Q  206 caataattgaaaa-ttgcaataagtgattatgatgaattctaacccccttaccttagatagagtaa-tccctagcttaggcttcaattttgctcctag 301  Q
    ||||||||||||| || || ||| ||||||| ||||| ||||||||||||||||||| ||||  || ||||||||| | |||||| ||| ||||||||    
T  23821589 caataattgaaaaattacactaaatgattataatgaaatctaacccccttaccttagttagatcaattccctagctcaagcttcactttagctcctag 23821492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 206 - 301
Target Start/End: Complemental strand, 23830668 - 23830571
Alignment:
Q  206 caataattgaaaa-ttgcaataagtgattatgatgaattctaacccccttaccttagatagagtaa-tccctagcttaggcttcaattttgctcctag 301  Q
    ||||||||||||| || || ||| ||||||| ||||| ||||||||||||||||||| ||||  || ||||||||| | |||||| ||| ||||||||    
T  23830668 caataattgaaaaattacactaaatgattataatgaaatctaacccccttaccttagttagatcaattccctagctcaagcttcactttagctcctag 23830571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 87
Target Start/End: Complemental strand, 21274230 - 21274174
Alignment:
Q  31 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgag 87  Q
    |||||||||||||| ||| ||||||||  |||||| | |||||||||||||||||||    
T  21274230 attgatcatgaaacatattacaattcatcaacaaccatgcataattcaccaattgag 21274174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 300
Target Start/End: Original strand, 463044 - 463116
Alignment:
Q  229 tgattatgatgaattctaacccccttaccttagat--agagtaatccctagcttaggcttcaattttgctccta 300  Q
    |||||||||| ||  ||||||||||||||||||||  ||| ||||||| | ||||||||||||||| |||||||    
T  463044 tgattatgataaagactaacccccttaccttagataaagattaatccc-aacttaggcttcaatttagctccta 463116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 319 - 349
Target Start/End: Complemental strand, 19794568 - 19794538
Alignment:
Q  319 attcttcaagttcctcttctctctaaccctt 349  Q
    |||||||||||||||||||||||||||||||    
T  19794568 attcttcaagttcctcttctctctaaccctt 19794538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 167
Target Start/End: Complemental strand, 22775379 - 22775242
Alignment:
Q  30 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaa-ttgagcatattttcaacatataccaacttctcatactttgaacatg 128  Q
    |||||| |||||| |||||||||||||||  |||||| |||||||||||  || |||| || |  |||||||||||  |  |||||||||||||||||||    
T  22775379 aattgaacatgaatcttatcacaattcaactacaacatagcataattcataaatttgaacaca-attcaacatatataactttctcatactttgaacatg 22775281  T
Q  129 tgattcaactaacaacaattcaattatccataacttcat 167  Q
       ||  || |||||||||||||||| | | ||||||||    
T  22775280 aagtttcaccaacaacaattcaattaccaacaacttcat 22775242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 167
Target Start/End: Complemental strand, 22780757 - 22780620
Alignment:
Q  30 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaa-ttgagcatattttcaacatataccaacttctcatactttgaacatg 128  Q
    |||||| |||||| |||||||||||||||  |||||| |||||||||||  || |||| || |  |||||||||||  |  |||||||||||||||||||    
T  22780757 aattgaacatgaatcttatcacaattcaactacaacatagcataattcataaatttgaacaca-attcaacatatataactttctcatactttgaacatg 22780659  T
Q  129 tgattcaactaacaacaattcaattatccataacttcat 167  Q
       ||  || |||||||||||||||| | | ||||||||    
T  22780658 aagtttcaccaacaacaattcaattaccaacaacttcat 22780620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 331
Target Start/End: Complemental strand, 36982395 - 36982292
Alignment:
Q  229 tgattatgatgaattctaacccccttaccttagatagag--taatccctagcttaggcttcaattttgctcct-agctctcatccaatccttgattcttc 325  Q
    |||||||||| ||  ||||||||||||||||||||| ||  |||| || | ||||||||||||||| |||||| ||||| | ||||||||||  ||||||    
T  36982395 tgattatgataaagactaacccccttaccttagataaagactaataccaa-cttaggcttcaatttagctcctcagctcac-tccaatccttagttcttc 36982298  T
Q  326 aagttc 331  Q
    ||||||    
T  36982297 aagttc 36982292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 266
Target Start/End: Complemental strand, 22775139 - 22775102
Alignment:
Q  229 tgattatgatgaattctaacccccttaccttagataga 266  Q
    ||||||||||||||||| ||||||||||||||| ||||    
T  22775139 tgattatgatgaattcttacccccttaccttagttaga 22775102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 266
Target Start/End: Complemental strand, 22780517 - 22780480
Alignment:
Q  229 tgattatgatgaattctaacccccttaccttagataga 266  Q
    ||||||||||||||||| ||||||||||||||| ||||    
T  22780517 tgattatgatgaattcttacccccttaccttagttaga 22780480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 31 - 87
Target Start/End: Complemental strand, 9653077 - 9653021
Alignment:
Q  31 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgag 87  Q
    |||||||||||||  |||| |||||||  |||||| | |||||||||||||||||||    
T  9653077 attgatcatgaaaaatatcgcaattcatcaacaaccatgcataattcaccaattgag 9653021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 19433519 - 19433452
Alignment:
Q  16 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaatt 84  Q
    |||||||||| || |||||| |||||  ||||  ||||||||||||||||| ||||||||||| |||||    
T  19433519 caacaacaac-atcaattgaacatgattcttacaacaattcaataacaacatagcataattcaacaatt 19433452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 311 - 351
Target Start/End: Complemental strand, 24087296 - 24087256
Alignment:
Q  311 aatccttgattcttcaagttcctcttctctctaaccctttt 351  Q
    |||| |||| |||||||||||||| ||||||||||||||||    
T  24087296 aatctttgaatcttcaagttcctcctctctctaaccctttt 24087256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 30 - 128
Target Start/End: Original strand, 25305518 - 25305617
Alignment:
Q  30 aattgatcatgaaacttatcacaattcaataa-caacaaagcataattcaccaatt-gagcatattttcaacatataccaacttctcatactttgaacat 127  Q
    |||||| |||||  |||| |||||||||| || ||||| ||||||||||| ||||| ||||||| || ||||| ||| ||  ||||||||||||||||||    
T  25305518 aattgaacatgactcttaccacaattcaacaatcaacatagcataattcaacaatttgagcataatt-caacacatatcactttctcatactttgaacat 25305616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 351
Target Start/End: Original strand, 25305830 - 25305878
Alignment:
Q  303 tctcatccaatccttgattcttcaagttcctcttctctctaaccctttt 351  Q
    |||| |||||| ||||| |||||||| |||| |||||||||||||||||    
T  25305830 tctcttccaattcttgaatcttcaagctcctattctctctaaccctttt 25305878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 119; Significance: 1e-60; HSPs: 4)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 16 - 170
Target Start/End: Complemental strand, 118150 - 117997
Alignment:
Q  16 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctca 115  Q
    |||||||||| || || |||||||||||||||||||||||||  ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  118150 caacaacaac-atcaactgatcatgaaacttatcacaattcatcaacaacatagcataattcaccaattgaacatattttcaacatataccaacttctca 118052  T
Q  116 tactttgaacatgtgattcaactaacaacaattcaattatccataacttcataca 170  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  118051 tactttgaacatgtaattcaactaacaacaattcaattatccataacttcataca 117997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 16 - 170
Target Start/End: Complemental strand, 109649 - 109496
Alignment:
Q  16 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctca 115  Q
    |||||||||| || ||||||||||||||||||||||||||||  ||||||  ||||||||||||||||| | ||||||||||| ||||||||| ||||||    
T  109649 caacaacaac-atcaattgatcatgaaacttatcacaattcatcaacaacttagcataattcaccaatttatcatattttcaatatataccaatttctca 109551  T
Q  116 tactttgaacatgtgattcaactaacaacaattcaattatccataacttcataca 170  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  109550 tactttgaacatgtaattcaactaacaacaattcaattatccataacttcataca 109496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #3
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 168 - 356
Target Start/End: Complemental strand, 109449 - 109260
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaa---ttgcaataagtgattatgatgaattctaacccccttaccttagata 264  Q
    |||||| ||||||||| ||||||||||||||||||||| ||||||||||||   ||||||||| ||||||||||||||||||||||||||||||||| ||    
T  109449 acaattaatcaattcagccaattaagcacttttcatac-aataattgaaaaaaattgcaataa-tgattatgatgaattctaacccccttaccttagtta 109352  T
Q  265 gagtaa--tccctagcttaggcttcaattttgctcctagctctcatccaatccttgattcttcaagttcctcttctctctaacccttttctcct 356  Q
    || |||  |||||| ||||||| |||||||| |||||||||||| | ||  ||||||||||||||| ||||||||||||||| |||||||||||    
T  109351 gattaatctccctaccttaggcatcaatttttctcctagctctc-ttcaccccttgattcttcaag-tcctcttctctctaatccttttctcct 109260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #4
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 168 - 356
Target Start/End: Complemental strand, 117950 - 117761
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaa---ttgcaataagtgattatgatgaattctaacccccttaccttagata 264  Q
    |||||| ||||||||| ||||||||||||||||||||| ||||||||||||   ||||||||| ||||||||||||||||||||||||||||||||| ||    
T  117950 acaattaatcaattcagccaattaagcacttttcatac-aataattgaaaaaaattgcaataa-tgattatgatgaattctaacccccttaccttagtta 117853  T
Q  265 gagtaa--tccctagcttaggcttcaattttgctcctagctctcatccaatccttgattcttcaagttcctcttctctctaacccttttctcct 356  Q
    || |||  |||||| ||||||| |||||||| |||||||||||| | ||  ||||||||||||||| ||||||||||||||| |||||||||||    
T  117852 gattaatctccctaccttaggcatcaatttttctcctagctctc-ttcaccccttgattcttcaag-tcctcttctctctaatccttttctcct 117761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 118; Significance: 4e-60; HSPs: 4)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 168 - 349
Target Start/End: Original strand, 159560 - 159742
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaa-ttgcaataagtgattatgatgaattctaacccccttaccttagataga 266  Q
    |||||| ||||||||||||||||||||||||||| ||| |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  159560 acaattaatcaattcacccaattaagcacttttcgtac-aataattgaaaaattgcaataa-tgattatgatgaattctaacccccttaccttagttaga 159657  T
Q  267 gtaatc--cctagcttaggcttcaattttgctcctagctctcatccaatccttgattcttcaagttcctcttctctctaaccctt 349  Q
     |||||  |||||||||||||||||||||||||| ||||||| |||| |||||||||||||||||||| ||||||||||||||||    
T  159658 ttaatctccctagcttaggcttcaattttgctccaagctctcttccactccttgattcttcaagttccccttctctctaaccctt 159742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 16 - 170
Target Start/End: Original strand, 85392 - 85545
Alignment:
Q  16 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctca 115  Q
    |||||||||| || ||||||||||||||||||||||||||||  ||||||  ||||||||||||||||| ||||||||||||| ||||||||| ||||||    
T  85392 caacaacaac-atcaattgatcatgaaacttatcacaattcatcaacaacctagcataattcaccaattaagcatattttcaatatataccaatttctca 85490  T
Q  116 tactttgaacatgtgattcaactaacaacaattcaattatccataacttcataca 170  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  85491 tactttgaacatgtaattcaactaacaacaattcaattatccataacttcataca 85545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 168 - 357
Target Start/End: Original strand, 85592 - 85782
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattg-aaaattgcaataagtgattatgatgaattctaacccccttaccttagataga 266  Q
    |||||| |||||||||||||||||||||||||||||| ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||  |||    
T  85592 acaattaatcaattcacccaattaagcacttttcata-caataattgaaaaattgcaataa-tgattatgatgaattctaacccccttaccttagtaaga 85689  T
Q  267 gtaa--tccctagcttaggcttcaattttgctcctagctctcatccaatccttgattcttcaagttc-ctcttctctctaacccttttctcctt 357  Q
     |||  |||||||||||| |||||||||||||||| ||| || |||| ||||||||||||||||||| | ||||||||||||||||||||||||    
T  85690 ttaatctccctagcttagacttcaattttgctccttgctttc-tccactccttgattcttcaagttctcccttctctctaacccttttctcctt 85782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #4
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 16 - 170
Target Start/End: Original strand, 159359 - 159513
Alignment:
Q  16 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattca-ccaattgagcatattttcaacatataccaacttctc 114  Q
    |||||||||| || ||||||||||||||||||||||||||||| | ||||| ||||||||||| ||||||||||||| |||||||  ||| ||  |||||    
T  159359 caacaacaac-atcaattgatcatgaaacttatcacaattcaacatcaacatagcataattcaaccaattgagcataatttcaactcatatcattttctc 159457  T
Q  115 atactttgaacatgtgattcaactaacaacaattcaattatccataacttcataca 170  Q
    ||||||||||||||  ||||||||||||||||| | ||||||||||||||||||||    
T  159458 atactttgaacatgaaattcaactaacaacaatgccattatccataacttcataca 159513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 117; Significance: 2e-59; HSPs: 3)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 30 - 170
Target Start/End: Complemental strand, 253163 - 253023
Alignment:
Q  30 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatgt 129  Q
    ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  253163 aattgatcatgaaacttatcacaattcaacaacaacaaagcatgattcaccaattgagcatattttcaacatataccaatttctcatactttgaaaatgt 253064  T
Q  130 gattcaactaacaacaattcaattatccataacttcataca 170  Q
     ||||||||||||||||||||||||||| ||||||||||||    
T  253063 aattcaactaacaacaattcaattatccctaacttcataca 253023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 168 - 242
Target Start/End: Complemental strand, 252976 - 252902
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaat 242  Q
    |||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  252976 acaattaatcaattcacccaattaagcacttttcatacaaataattgaaaattgcaataagtgattatgatgaat 252902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 229 - 331
Target Start/End: Complemental strand, 247397 - 247293
Alignment:
Q  229 tgattatgatgaattctaacccccttaccttagat--agagtaatccctagcttaggcttcaattttgctcct-agct-ctcatccaatccttgattctt 324  Q
    |||||||||| ||  ||||||||||||||||||||  ||| ||||||| | ||||||||||||||| |||||| |||| ||| | ||| |||||||||||    
T  247397 tgattatgataaagactaacccccttaccttagataaagattaatccc-aacttaggcttcaatttagctcctaagctcctcct-caacccttgattctt 247300  T
Q  325 caagttc 331  Q
    |||||||    
T  247299 caagttc 247293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0554 (Bit Score: 116; Significance: 6e-59; HSPs: 2)
Name: scaffold0554
Description:

Target: scaffold0554; HSP #1
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 169 - 348
Target Start/End: Original strand, 2177 - 2357
Alignment:
Q  169 caatttatcaattcacccaattaagcacttttcataccaataattgaaaa-ttgcaataagtgattatgatgaattctaacccccttaccttagatagag 267  Q
    ||||| ||||||||||||||||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||| |||| ||||     
T  2177 caattaatcaattcacccaattaagcacttttcatac-aataattgaaaaattgcaataa-tgattatgatgaattctaacccccttactttagttagat 2274  T
Q  268 taatc--cctagcttaggcttcaattttgctcctagctctcatccaatccttgattcttcaagttcctcttctctctaaccct 348  Q
    |||||  |||||||||||||||||||| |||||||| ||||  ||||||||||||||||||||||||||||||||||||||||    
T  2275 taatctccctagcttaggcttcaatttagctcctagttctcccccaatccttgattcttcaagttcctcttctctctaaccct 2357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0554; HSP #2
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 16 - 170
Target Start/End: Original strand, 1976 - 2129
Alignment:
Q  16 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattca-ccaattgagcatattttcaacatataccaacttctc 114  Q
    |||||||||| || ||||||||||||| ||||| |||| |||| |||| || ||||||||||| ||||||||||||||||||| |||||||||  ||| |    
T  1976 caacaacaac-atcaattgatcatgaatcttataacaaatcaacaaca-catagcataattcaaccaattgagcatattttcatcatataccattttcgc 2073  T
Q  115 atactttgaacatgtgattcaactaacaacaattcaattatccataacttcataca 170  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  2074 atactttgaacatgaaattcaactaacaacaattcaattatccataacttcataca 2129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 115; Significance: 2e-58; HSPs: 2)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 16 - 170
Target Start/End: Original strand, 9047 - 9200
Alignment:
Q  16 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctca 115  Q
    |||||||||| || || ||||| ||||||||||||||| |||  ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  9047 caacaacaac-atcaagtgatcttgaaacttatcacaaatcatcaacaacatagcataattcaccaattgagcatattttcaacatataccaacttctca 9145  T
Q  116 tactttgaacatgtgattcaactaacaacaattcaattatccataacttcataca 170  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  9146 tactttgaacatgtaattcaactaacaacaattcaattatccataacttcataca 9200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 170 - 349
Target Start/End: Original strand, 9249 - 9430
Alignment:
Q  170 aatttatcaattcacccaattaagcacttttcataccaataattgaaaa--ttgcaataagtgattatgatgaattctaacccccttaccttagatagag 267  Q
    |||| |||||||||| |||||||||||||||||||| ||||||||||||  ||||||||| |||||||||| |||||||||||||||||||||| ||||     
T  9249 aattaatcaattcactcaattaagcacttttcatac-aataattgaaaaaattgcaataa-tgattatgataaattctaacccccttaccttagttagat 9346  T
Q  268 taatc--cctagcttaggcttcaattttgctcctagctctcatccaatccttgattcttcaagttcctcttctctctaaccctt 349  Q
    |||||  |||||||||| |||||||||||||||||||||    ||||| |||||||||||||||||||||||||||||||||||    
T  9347 taatctccctagcttagacttcaattttgctcctagctcaaccccaattcttgattcttcaagttcctcttctctctaaccctt 9430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 115; Significance: 2e-58; HSPs: 3)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 168 - 358
Target Start/End: Complemental strand, 24715 - 24523
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagatagag 267  Q
    |||||| ||||||||||| ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||      
T  24715 acaattaatcaattcacctaattaagcacttttcatacaaataattgaaaatttcaataagtgattatgatgaattctaacccccttaccttagttaggt 24616  T
Q  268 taa--tccctagcttaggcttcaattttgctcctagctc-tcatccaatccttgattcttcaagttcctcttctctctaacccttttctccttt 358  Q
    |||  || |||||||| |||||||||||||||||||||| ||  |||| |||||||||| |||| |||||||||||||||||||||||||||||    
T  24615 taatctctctagcttatgcttcaattttgctcctagctcttctcccaacccttgattctgcaag-tcctcttctctctaacccttttctccttt 24523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 31 - 170
Target Start/End: Complemental strand, 24901 - 24762
Alignment:
Q  31 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatgtg 130  Q
    |||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||| ||||||| ||||| | || |||||||||||||||||     
T  24901 attgatcatgaaacttatcacaattcatcaacaacatagcataattcaccaattgagcatatgttcaacacatacccatttttcatactttgaacatgta 24802  T
Q  131 attcaactaacaacaattcaattatccataacttcataca 170  Q
    |||||||||||||||||| ||||||| |||||||||||||    
T  24801 attcaactaacaacaatttaattatcaataacttcataca 24762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 95049 - 95109
Alignment:
Q  31 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 91  Q
    |||||||||||||||||||||||||||  |||||| | ||||||||||| |||||||||||    
T  95049 attgatcatgaaacttatcacaattcatcaacaaccatgcataattcactaattgagcata 95109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 113; Significance: 4e-57; HSPs: 2)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 168 - 356
Target Start/End: Original strand, 7830 - 8019
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagatagag 267  Q
    |||||| ||||||||| ||||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||||| |||      
T  7830 acaattaatcaattcatccaattaagcacttttcatacaaataattgaaaattacaataagtaattatgatgaattctaacccccttaccttag-taggt 7928  T
Q  268 taa--tccctagcttaggcttcaattttgctcctagctc-tcatccaatccttgattcttcaagttcctcttctctctaacccttttctcct 356  Q
    |||  || ||||||||||||||||||||||||||||||| ||  |||| ||||||||||||||| |||||||||||||||||||||||||||    
T  7929 taatctctctagcttaggcttcaattttgctcctagctcttctcccaacccttgattcttcaag-tcctcttctctctaacccttttctcct 8019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240; HSP #2
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 16 - 170
Target Start/End: Original strand, 7629 - 7782
Alignment:
Q  16 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctca 115  Q
    |||||||||| || ||||||||||||||||||||| |||| |  |||||||| ||||||||||||||||||||||||||||| |||||||| | || |||    
T  7629 caacaacaac-atcaattgatcatgaaacttatcataatttatcaacaacaatgcataattcaccaattgagcatattttcatcatatacccatttttca 7727  T
Q  116 tactttgaacatgtgattcaactaacaacaattcaattatccataacttcataca 170  Q
    |||||||||||||| ||||||| |||||||||||||||||  |||||||||||||    
T  7728 tactttgaacatgtaattcaaccaacaacaattcaattatttataacttcataca 7782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 113; Significance: 4e-57; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 168 - 356
Target Start/End: Original strand, 22951 - 23140
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagatagag 267  Q
    |||||| ||||||||| |||||||||||||||| |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||      
T  22951 acaattaatcaattcatccaattaagcacttttgatacaaataattgaaaattacaataagtgattatgatgaattctaacccccttaccttagttaggt 23050  T
Q  268 taatccc--tagcttaggcttcaattttgctcctagctc-tcatccaatccttgattcttcaagttcctcttctctctaacccttttctcct 356  Q
    ||||| |  |||||||||||||||||||||||||||||| ||  |||||||||||||||||||| ||||||||||||| |||||||||||||    
T  23051 taatctctttagcttaggcttcaattttgctcctagctcttctcccaatccttgattcttcaag-tcctcttctctct-acccttttctcct 23140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 16 - 170
Target Start/End: Original strand, 22751 - 22904
Alignment:
Q  16 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctca 115  Q
    |||||||||| || ||||||||||||||||||||||||||||  ||||| || |||||||||||||||||||||||||||||||| ||||| | || |||    
T  22751 caacaacaac-atcaattgatcatgaaacttatcacaattcatcaacaaaaatgcataattcaccaattgagcatattttcaacacatacccatttttca 22849  T
Q  116 tactttgaacatgtgattcaactaacaacaattcaattatccataacttcataca 170  Q
    |||||||||||||| ||||||||||||||||||||||||| || |||||||||||    
T  22850 tactttgaacatgtaattcaactaacaacaattcaattattcaaaacttcataca 22904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 112; Significance: 1e-56; HSPs: 4)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 15 - 170
Target Start/End: Complemental strand, 302 - 148
Alignment:
Q  15 tcaacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctc 114  Q
    ||||||||||| || |||||||||| |||||||||||||||||| ||||||||| |||||||||| |||| |||||||||||||||||||||||||||||    
T  302 tcaacaacaac-atcaattgatcattaaacttatcacaattcaacaacaacaaaacataattcacgaattaagcatattttcaacatataccaacttctc 204  T
Q  115 atactttgaacatgtgattcaactaacaacaattcaattatccataacttcataca 170  Q
    |||||||||||||||  |||||||||||||||| ||||||||||||||||||||||    
T  203 atactttgaacatgtatttcaactaacaacaatccaattatccataacttcataca 148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310; HSP #2
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 30 - 170
Target Start/End: Complemental strand, 6582 - 6442
Alignment:
Q  30 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatgt 129  Q
    |||||||||| |||||||||||||||||| ||||||||| |||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  6582 aattgatcattaaacttatcacaattcaacaacaacaaaacataattcacgaattaagcatattttcaacatataccaacttctcatactttgaacatgt 6483  T
Q  130 gattcaactaacaacaattcaattatccataacttcataca 170  Q
      |||||||||||||||| ||||||||||||||||||||||    
T  6482 atttcaactaacaacaatccaattatccataacttcataca 6442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 175 - 260
Target Start/End: Complemental strand, 94 - 10
Alignment:
Q  175 atcaattcacccaattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttacctta 260  Q
    ||||||||| |||||||||||||| |||||| |||||||||||||| ||| ||||||||||||||||  |||||||||||||||||    
T  94 atcaattcatccaattaagcacttatcatacaaataattgaaaattacaa-aagtgattatgatgaacactaacccccttacctta 10  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 175 - 260
Target Start/End: Complemental strand, 6388 - 6304
Alignment:
Q  175 atcaattcacccaattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttacctta 260  Q
    ||||||||| |||||||||||||| |||||| |||||||||||||| ||| ||||||||||||||||  |||||||||||||||||    
T  6388 atcaattcatccaattaagcacttatcatacaaataattgaaaattacaa-aagtgattatgatgaacactaacccccttacctta 6304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 112; Significance: 1e-56; HSPs: 2)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 15 - 170
Target Start/End: Original strand, 9996 - 10150
Alignment:
Q  15 tcaacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctc 114  Q
    ||||||||||| || ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||  ||| ||    
T  9996 tcaacaacaac-atcaattgatcatgaaacttatcacaattcaacaacaacaaagcataattcaccaattgagcatattttcaacatatacc--cttttc 10092  T
Q  115 ata--ctttgaacatgtgattcaactaacaacaattcaattatccataacttcataca 170  Q
    |||  |||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  10093 atactctttgaacatgtaattcaactaacaacaattcaattatccataacttcataca 10150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 168 - 350
Target Start/End: Original strand, 10197 - 10378
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaa-ttgcaataagtgattatgatgaattctaacccccttaccttagataga 266  Q
    |||||| ||||||||||||||||||||||||||||||| || ||||||||| ||||||||| ||||||| ||||||||||||||||||||||||| ||||    
T  10197 acaattaatcaattcacccaattaagcacttttcatacaaagaattgaaaatttgcaataa-tgattattatgaattctaacccccttaccttagttaga 10295  T
Q  267 gtaa--tccctagcttaggcttcaattttgctcctagctctcatccaatccttgattcttcaagttcctcttctctctaacccttt 350  Q
     |||  ||| ||||||||||||||||||  ||||||||||||  ||| |||||||||||||||| |||||||||||||||||||||    
T  10296 ttaatctccttagcttaggcttcaattt--ctcctagctctctcccattccttgattcttcaag-tcctcttctctctaacccttt 10378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 110; Significance: 2e-55; HSPs: 6)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 168 - 349
Target Start/End: Complemental strand, 112532 - 112351
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaa-ttgcaataagtgattatgatgaattctaacccccttaccttagataga 266  Q
    |||||| |||||||||||||| |||| ||||||||||| |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  112532 acaattaatcaattcacccaaataagtacttttcatac-aataattgaaaaattgcaataa-tgattatgatgaattctaacccccttaccttagttaga 112435  T
Q  267 gtaatc--cctagcttaggcttcaattttgctcctagctctcatccaatccttgattcttcaagttcctcttctctctaaccctt 349  Q
     |||||  |||||||||||||||||||||||||||||||||| || |  ||||||||||||||||||||||||||||||||||||    
T  112434 ttaatctccctagcttaggcttcaattttgctcctagctctcttc-accccttgattcttcaagttcctcttctctctaaccctt 112351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 16 - 170
Target Start/End: Complemental strand, 112732 - 112579
Alignment:
Q  16 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctca 115  Q
    |||||||||| || ||||||||||||||||||||||||||||  ||| ||| |||||||||||| |||||||||||||||||||||||||||| ||||||    
T  112732 caacaacaac-ataaattgatcatgaaacttatcacaattcatcaaccacatagcataattcactaattgagcatattttcaacatataccaatttctca 112634  T
Q  116 tactttgaacatgtgattcaactaacaacaattcaattatccataacttcataca 170  Q
    |||||||||||||| ||||||||||||||||||||||| | ||||||||||||||    
T  112633 tactttgaacatgtaattcaactaacaacaattcaattgttcataacttcataca 112579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 16 - 167
Target Start/End: Original strand, 109650 - 109800
Alignment:
Q  16 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaatt-gagcatattttcaacatataccaacttctc 114  Q
    |||||||||| || || |||||||||| ||||||||||||||| ||||||| |||| |||||| ||||| |||||||||| ||||||||||||  |||||    
T  109650 caacaacaac-atcaactgatcatgaatcttatcacaattcaacaacaacatagcaaaattcaacaatttgagcatattt-caacatataccactttctc 109747  T
Q  115 atactttgaacatgtgattcaactaacaacaattcaattatccataacttcat 167  Q
    ||||||| ||||||  |||  | ||||||||||||||||||| | ||||||||    
T  109748 atactttaaacatgaaatttcattaacaacaattcaattatcaacaacttcat 109800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 30 - 167
Target Start/End: Complemental strand, 103096 - 102959
Alignment:
Q  30 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaa-ttgagcatattttcaacatataccaacttctcatactttgaacatg 128  Q
    |||||| ||||||  |||||||||||||| ||||||| ||||||||||| ||| || ||||||||  || |||||||||  |||||||||||||||||||    
T  103096 aattgaacatgaatgttatcacaattcaacaacaacatagcataattcaacaaatttagcatattc-caccatataccactttctcatactttgaacatg 102998  T
Q  129 tgattcaactaacaacaattcaattatccataacttcat 167  Q
      |||  ||||||||||||||||||||| | ||||||||    
T  102997 aaatttcactaacaacaattcaattatcaaaaacttcat 102959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 229 - 300
Target Start/End: Original strand, 109905 - 109977
Alignment:
Q  229 tgattatgatgaattctaacccccttaccttagatagagtaa-tccctagcttaggcttcaattttgctccta 300  Q
    ||||||||||||||||||||| ||||||||||| |||| ||| |||||||||||||||||| ||| |||||||    
T  109905 tgattatgatgaattctaaccaccttaccttagttagattaattccctagcttaggcttcactttagctccta 109977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 168 - 350
Target Start/End: Complemental strand, 102909 - 102727
Alignment:
Q  168 acaatttatcaattcacccaattaagcactt-ttcataccaataattgaaaattg---caataagtgattatgatgaattctaacccccttaccttagat 263  Q
    |||||| ||||||| || ||||||||||||| ||||||| || |||||||||||    ||| || ||||||||||||||| ||| ||||||||||||| |    
T  102909 acaattaatcaatt-actcaattaagcacttattcatac-aacaattgaaaatttacacaaaaaatgattatgatgaattataaaccccttaccttagtt 102812  T
Q  264 agagtaat-ccctagcttaggcttcaattttgctccta-gctctcatccaatccttgattcttcaagttcctcttctctctaacccttt 350  Q
    |||  ||| |||||||| | |||||| ||| ||| ||| | |||| ||   | ||||| |||||||| |||||||||||||||||||||    
T  102811 agatcaatcccctagctcaagcttcactttagcttctaggttctc-tc---ttcttgaatcttcaagctcctcttctctctaacccttt 102727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 109; Significance: 9e-55; HSPs: 6)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 168 - 356
Target Start/End: Original strand, 40919 - 41108
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagatagag 267  Q
    |||||| ||||||||||||||||||||||| ||||||| ||||||| ||||||||||||| ||||||||||||||| ||||||||||||||||| |||      
T  40919 acaattaatcaattcacccaattaagcactattcatac-aataattaaaaattgcaataaatgattatgatgaattataacccccttaccttagttaggt 41017  T
Q  268 taatccc--tagcttaggcttcaattttgctcctagctc-tcatccaatccttgattcttcaagttcctcttctctctaacccttttctcct 356  Q
    ||||| |  |||||||||||||||||||||||||||||| ||  |||| ||||||||||||||| |||||||||||||||||||||||||||    
T  41018 taatctctttagcttaggcttcaattttgctcctagctcttctcccaacccttgattcttcaag-tcctcttctctctaacccttttctcct 41108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 168 - 356
Target Start/End: Original strand, 46426 - 46615
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagatagag 267  Q
    |||||| ||||||||||||||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||| |||||| |||||||||  |||      
T  46426 acaattaatcaattcacccaattaagcacttttcatac-aataattaaaaattgcaataaatgattatgatgaattataaccctcttaccttaattaggt 46524  T
Q  268 taatccc--tagcttaggcttcaattttgctcctagctc-tcatccaatccttgattcttcaagttcctcttctctctaacccttttctcct 356  Q
    ||||| |  |||||||||||||||||||||||||||||| ||  |||| ||||||||||||||  |||||||||||||||||||||||||||    
T  46525 taatctctttagcttaggcttcaattttgctcctagctcttctcccaacccttgattcttcaa-atcctcttctctctaacccttttctcct 46615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #3
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 31 - 170
Target Start/End: Original strand, 46239 - 46379
Alignment:
Q  31 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaac--ttctcatactttgaacatg 128  Q
    ||||||||||||||||||||||||| || ||||||| ||||||||||||||||||||||||||||| ||||| ||| ||  ||| |||||||||| ||||    
T  46239 attgatcatgaaacttatcacaatttaacaacaacatagcataattcaccaattgagcatattttc-acata-acccacttttcacatactttgatcatg 46336  T
Q  129 -tgattcaactaacaacaattcaattatccataacttcataca 170  Q
      | |||||||||||||||||||||||||||||||||||||||    
T  46337 aagtttcaactaacaacaattcaattatccataacttcataca 46379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 31 - 170
Target Start/End: Original strand, 40732 - 40872
Alignment:
Q  31 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaac--ttctcatactttgaacatg 128  Q
    ||||||||||||||||||||||||  || ||||| | ||||||||||||||||||||||||||||| ||||| ||| ||  ||| |||||||||| ||||    
T  40732 attgatcatgaaacttatcacaatgtaacaacaatatagcataattcaccaattgagcatattttc-acata-acccacttttcacatactttgatcatg 40829  T
Q  129 -tgattcaactaacaacaattcaattatccataacttcataca 170  Q
      | |||||||||||||||||||||||||||||||||||||||    
T  40830 aagtttcaactaacaacaattcaattatccataacttcataca 40872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 91
Target Start/End: Original strand, 79942 - 79998
Alignment:
Q  35 atcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 91  Q
    |||||||||| ||||||||||||  |||||  | |||||||||||||||||||||||    
T  79942 atcatgaaacatatcacaattcatcaacaatcatgcataattcaccaattgagcata 79998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 319 - 349
Target Start/End: Original strand, 80280 - 80310
Alignment:
Q  319 attcttcaagttcctcttctctctaaccctt 349  Q
    |||||||||||||||||||||||||||||||    
T  80280 attcttcaagttcctcttctctctaaccctt 80310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1867 (Bit Score: 108; Significance: 4e-54; HSPs: 2)
Name: scaffold1867
Description:

Target: scaffold1867; HSP #1
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 168 - 356
Target Start/End: Original strand, 404 - 591
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagatagag 267  Q
    |||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||      
T  404 acaattaatcaattcacccaattaagcacttttcatacaaataattgaaaattgcaataagtgattatgattaattctaacccccttaccttag-taggt 502  T
Q  268 taa--tccctagcttaggcttcaattttgctcctagctctcatccaatccttgattcttcaagttcctcttctctctaacccttttctcct 356  Q
    |||  ||||||||||||||||||||||| |||||||||||| | | | ||||  ||||||||| ||||||||||||||||| |||||||||    
T  503 taatctccctagcttaggcttcaatttttctcctagctctctttc-accctttgttcttcaag-tcctcttctctctaaccattttctcct 591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1867; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 15 - 170
Target Start/End: Original strand, 203 - 357
Alignment:
Q  15 tcaacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctc 114  Q
    ||||||||||| || ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||   |||      
T  203 tcaacaacaac-atcaattgatcatgaaacttatcacaattcaacaacaacaaagcataattcaccaattgagcatattttcaacatatacccttttcat 301  T
Q  115 atactttgaacatgtgattcaactaacaacaattcaattatccataacttcataca 170  Q
    | ||||  ||||||   |||||| ||||||||||||||||| ||||||||||||||    
T  302 acacttgaaacatgaatttcaaccaacaacaattcaattattcataacttcataca 357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 107; Significance: 1e-53; HSPs: 2)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 168 - 350
Target Start/End: Original strand, 33922 - 34106
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttt-tcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagataga 266  Q
    |||||| ||||||||| ||||||||||||||  |||||| | ||||||||||||||||||| ||||||||||||||||||| ||||||||||||| ||||    
T  33922 acaattaatcaattcatccaattaagcacttaatcatac-agtaattgaaaattgcaataaatgattatgatgaattctaatccccttaccttagttaga 34020  T
Q  267 gtaatc--cctagcttaggcttcaattttgctcctagctctcatccaatccttgattcttcaagttcctcttctctctaacccttt 350  Q
     |||||  |||||||||||||||||||| |||||||||| ||  ||||||||||||||||||||||||| ||||||||||||||||    
T  34021 ttaatctccctagcttaggcttcaatttagctcctagctttcccccaatccttgattcttcaagttccttttctctctaacccttt 34106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103; HSP #2
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 16 - 170
Target Start/End: Original strand, 33722 - 33875
Alignment:
Q  16 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctca 115  Q
    |||||||||| || ||||||||||||||||||||| ||||||  ||||||| ||||||||||||||||| | |||| |||||||||||||||| ||||||    
T  33722 caacaacaac-atcaattgatcatgaaacttatcaaaattcatcaacaacatagcataattcaccaattaaacataatttcaacatataccaatttctca 33820  T
Q  116 tactttgaacatgtgattcaactaacaacaattcaattatccataacttcataca 170  Q
    |||||||||||||| |||||||||||||||||||||||||| |||||||||||||    
T  33821 tactttgaacatgtaattcaactaacaacaattcaattatctataacttcataca 33875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0740 (Bit Score: 106; Significance: 6e-53; HSPs: 2)
Name: scaffold0740
Description:

Target: scaffold0740; HSP #1
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 168 - 356
Target Start/End: Original strand, 4544 - 4730
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagatagag 267  Q
    |||||| ||||||||| |||||||||||||| |||||| |||||||||||||| ||| | |||||||||||||||||||||||||||||||||| ||||     
T  4544 acaattaatcaattcatccaattaagcacttatcatacaaataattgaaaattacaa-acgtgattatgatgaattctaacccccttaccttag-tagat 4641  T
Q  268 taa--tccctagcttaggcttcaattttgctcctagctctc-atccaatccttgattcttcaagttcctcttctctctaacccttttctcct 356  Q
    |||  |||||||||||||||||||||||||||||||||||| |||  | ||||||||||||||| |||||||||||||||||||||||||||    
T  4642 taatctccctagcttaggcttcaattttgctcctagctctctatc--acccttgattcttcaag-tcctcttctctctaacccttttctcct 4730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0740; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 30 - 170
Target Start/End: Original strand, 4358 - 4497
Alignment:
Q  30 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcat--actttgaacat 127  Q
    |||||||||| |||||||||||||||||  |||||||| |||||||||||||||||| ||||||||| ||| ||||| | || ||||  |||||||||||    
T  4358 aattgatcataaaacttatcacaattcatcaacaacaatgcataattcaccaattgaacatattttc-acacataccca-ttttcatacactttgaacat 4455  T
Q  128 gtgattcaactaacaacaattcaattatccataacttcataca 170  Q
    || ||||||||||| ||||||||||||| ||||| || |||||    
T  4456 gtaattcaactaac-acaattcaattattcataatttgataca 4497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480 (Bit Score: 106; Significance: 6e-53; HSPs: 4)
Name: scaffold0480
Description:

Target: scaffold0480; HSP #1
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 168 - 356
Target Start/End: Complemental strand, 5234 - 5048
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagatagag 267  Q
    |||||| ||||||||| |||||||||||||| |||||| ||||||||||||||  || |||||||||||||||||||||||||||||||||||| ||||     
T  5234 acaattaatcaattcatccaattaagcacttatcatacaaataattgaaaattagaa-aagtgattatgatgaattctaacccccttaccttag-tagat 5137  T
Q  268 taa--tccctagcttaggcttcaattttgctcctagctctc-atccaatccttgattcttcaagttcctcttctctctaacccttttctcct 356  Q
    |||  |||||||||||||||||||||||||||||||||||| |||  | ||||||||||||||| |||||||||||||||||||||||||||    
T  5136 taatctccctagcttaggcttcaattttgctcctagctctctatc--acccttgattcttcaag-tcctcttctctctaacccttttctcct 5048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 16 - 170
Target Start/End: Complemental strand, 9069 - 8916
Alignment:
Q  16 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattca-ccaattgagcatattttcaacatataccaacttctc 114  Q
    |||||||||| || |||||||||||||||||||||||||| || ||||||| ||||||||||| |||||||||||||| | ||||||||| ||  |||||    
T  9069 caacaacaac-atcaattgatcatgaaacttatcacaatttaacaacaacatagcataattcaaccaattgagcatatat-caacatatatcattttctc 8972  T
Q  115 atactttgaacatgtgattcaactaacaacaattcaattatccataacttcataca 170  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  8971 atactttgaacatgaaattcaactaacaacaattcaattatccataacttcataca 8916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 168 - 352
Target Start/End: Complemental strand, 8869 - 8683
Alignment:
Q  168 acaatttatcaattcacccaattaagcactt-ttcataccaataattgaaaattgca--ataagtgattatgatgaattctaacccccttaccttagata 264  Q
    |||||| |||||||  ||||||||||||||| ||||||| ||||||||||| |||||  | || ||||||||||||| ||||||||||||||||||| ||    
T  8869 acaattaatcaattttcccaattaagcacttattcatac-aataattgaaa-ttgcaccaaaaatgattatgatgaactctaacccccttaccttagtta 8772  T
Q  265 gagtaatc--cctagcttaggcttcaattttgctcctagctctcatccaatccttgattcttcaagttcctcttctctctaacccttttc 352  Q
    || |||||  |||||||||||||||| |||| |||||||||||| ||||||| |||||||||||||||||||||||||| ||||||||||    
T  8771 gattaatctccctagcttaggcttcattttttctcctagctctcttccaatc-ttgattcttcaagttcctcttctctcaaacccttttc 8683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 16 - 170
Target Start/End: Complemental strand, 5433 - 5281
Alignment:
Q  16 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctca 115  Q
    |||||||||| || ||||||||||||||| ||||||||||||  |||||||| || |||||||||||||||||||||||||  || ||||| | || |||    
T  5433 caacaacaac-atcaattgatcatgaaacatatcacaattcatcaacaacaatgcctaattcaccaattgagcatattttc-gcacataccta-ttttca 5337  T
Q  116 t--actttgaacatgtgattcaactaacaacaattcaattatccataacttcataca 170  Q
    |  ||||||||||||| ||||||||||| ||||||||||||| ||||||||||||||    
T  5336 tacactttgaacatgtaattcaactaac-acaattcaattattcataacttcataca 5281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 105; Significance: 2e-52; HSPs: 10)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 168 - 356
Target Start/End: Original strand, 88535 - 88725
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagatagag 267  Q
    |||||| |||||||||||||||||| |||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||   ||||     
T  88535 acaattaatcaattcacccaattaaacacttttcatacaaataattgaaaatagcaataagtgattatgatgaattctaacccccttacctttattagat 88634  T
Q  268 taa--tccctagcttaggcttcaattttgctcctagctctcatcc-aatccttgattcttcaagttcctcttctctctaacccttttctcct 356  Q
    |||  || |||||||||||||||||||| |||||||||||  ||| || ||||||||||||||| |||| |||||||||||||| |||||||    
T  88635 taatctctctagcttaggcttcaatttttctcctagctcttctccgaacccttgattcttcaag-tcctattctctctaaccctattctcct 88725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 170 - 352
Target Start/End: Original strand, 16162 - 16347
Alignment:
Q  170 aatttatcaattcacccaattaagcactt-ttcataccaataattgaaaattgca--ataagtgattatgatgaattctaacccccttaccttagataga 266  Q
    |||| |||||||||||||||||||||||| ||||||| ||||||||||| |||||  | || ||||||||||||||||||||||||||||||||| ||||    
T  16162 aattaatcaattcacccaattaagcacttgttcatac-aataattgaaa-ttgcaccaaaaatgattatgatgaattctaacccccttaccttagttaga 16259  T
Q  267 gtaatc--cctagcttaggcttcaattttgctcctagctctcatccaatccttgattcttcaagttcctcttctctctaacccttttc 352  Q
     |||||  |||||||||||||||||||| |||||||||||||  ||||||||||||||||||||||||| ||||||||||||| ||||    
T  16260 ttaatctccctagcttaggcttcaatttagctcctagctctcccccaatccttgattcttcaagttcctattctctctaacccatttc 16347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 170 - 352
Target Start/End: Original strand, 25693 - 25878
Alignment:
Q  170 aatttatcaattcacccaattaagcactt-ttcataccaataattgaaaattgca--ataagtgattatgatgaattctaacccccttaccttagataga 266  Q
    |||| |||||||||||||||||||||||| ||||||| ||||||||||| |||||  | || ||||||||||||||||||||||||||||||||| ||||    
T  25693 aattaatcaattcacccaattaagcacttgttcatac-aataattgaaa-ttgcaccaaaaatgattatgatgaattctaacccccttaccttagttaga 25790  T
Q  267 gtaatc--cctagcttaggcttcaattttgctcctagctctcatccaatccttgattcttcaagttcctcttctctctaacccttttc 352  Q
     |||||  |||||||||||||||||||| |||||||||||||  ||||||||||||||||||||||||| ||||||||||||| ||||    
T  25791 ttaatctccctagcttaggcttcaatttagctcctagctctcccccaatccttgattcttcaagttcctattctctctaacccatttc 25878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #4
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 168 - 352
Target Start/End: Original strand, 11948 - 12135
Alignment:
Q  168 acaatttatcaattcacccaattaagcactt-ttcataccaataattgaaaattgca--ataagtgattatgatgaattctaacccccttaccttagata 264  Q
    |||||| ||||||| |||||||||||||||| ||||||| ||||||||||| |||||  | || ||||||||||||||||||||| ||||||||||| ||    
T  11948 acaattaatcaattgacccaattaagcacttattcatac-aataattgaaa-ttgcaccaaaaatgattatgatgaattctaaccaccttaccttagtta 12045  T
Q  265 gagtaatc--cctagcttaggcttcaattttgctcctagctctcatccaatccttgattcttcaagttcctcttctctctaacccttttc 352  Q
    || |||||  ||||||||||||||||||||  |||||||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  12046 gattaatctccctagcttaggcttcaatttaactcctagctcttctccaatccttgattcttcaagttcctcttctctctaacccttttc 12135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #5
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 16 - 170
Target Start/End: Complemental strand, 132437 - 132284
Alignment:
Q  16 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctca 115  Q
    |||||||||| || ||||||||||||||||||||||||||||  |||||| | |||||||||||||||||||||||||||||||| ||||| | || |||    
T  132437 caacaacaac-atcaattgatcatgaaacttatcacaattcatcaacaacgatgcataattcaccaattgagcatattttcaacacatacccatttttca 132339  T
Q  116 tactttgaacatgtgattcaactaacaacaattcaattatccataacttcataca 170  Q
    |||||||||||| | ||||||| ||||||||||||||||||||||||||||||||    
T  132338 tactttgaacatataattcaacaaacaacaattcaattatccataacttcataca 132284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 31 - 170
Target Start/End: Original strand, 88349 - 88488
Alignment:
Q  31 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatgtg 130  Q
    |||||||||||||||||||||||||||  ||||||| ||||||||||||||||||| ||||||||||||| ||||| | || |||||||||||||||||     
T  88349 attgatcatgaaacttatcacaattcatcaacaacatagcataattcaccaattgatcatattttcaacacatacccatttttcatactttgaacatgta 88448  T
Q  131 attcaactaacaacaattcaattatccataacttcataca 170  Q
    ||||||||||||||| || |||||| ||||||||||||||    
T  88449 attcaactaacaacattttaattattcataacttcataca 88488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 168 - 356
Target Start/End: Complemental strand, 132237 - 132047
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaa-ttgcaataagtgattatgatgaattctaacccccttaccttagataga 266  Q
    |||||| ||||||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||||| |||||||||||||||| |||     
T  132237 acaattaatcaattcacccaattaagcacttttcatagaaataattgaaaaattgcaataagtgattatgatgaattccaacccccttaccttagttagg 132138  T
Q  267 gtaa--tccctagcttaggcttcaattttgctcctagctc-tcatccaatccttgattcttcaagttcctcttctctctaacccttttctcct 356  Q
     |||  || ||||||||| |||||||||| ||| |||||| ||  |||| |||| |||||||||| ||||||||||||| |||||||||||||    
T  132137 ttaatctctctagcttagacttcaatttttctcatagctcttctcccaacccttaattcttcaag-tcctcttctctct-acccttttctcct 132047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #8
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 16 - 170
Target Start/End: Original strand, 11747 - 11901
Alignment:
Q  16 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattca-ccaattgagcatattttcaacatataccaacttctc 114  Q
    |||||||||| || ||||||||||||||||||||||||||| | ||||||| ||||||||||| |||||||||||| ||||||||  ||| |   |||||    
T  11747 caacaacaac-atcaattgatcatgaaacttatcacaattctacaacaacatagcataattcaaccaattgagcatgttttcaactcatatctttttctc 11845  T
Q  115 atactttgaacatgtgattcaactaacaacaattcaattatccataacttcataca 170  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  11846 atactttgaacatgaaattcaactaacaacaattcaattatccataacttcataca 11901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #9
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 80 - 170
Target Start/End: Original strand, 16022 - 16112
Alignment:
Q  80 caattgagcatattttcaacatataccaacttctcatactttgaacatgtgattcaactaacaacaattcaattatccataacttcataca 170  Q
    |||| |||||||||||||||  ||| ||  |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  16022 caatggagcatattttcaactcatatcattttctcatactttgaacatgaaattcaactaacaacaattcaattatccataacttcataca 16112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #10
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 80 - 170
Target Start/End: Original strand, 25553 - 25643
Alignment:
Q  80 caattgagcatattttcaacatataccaacttctcatactttgaacatgtgattcaactaacaacaattcaattatccataacttcataca 170  Q
    |||| |||||||||||||||  ||| ||  |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  25553 caatggagcatattttcaactcatatcattttctcatactttgaacatgaaattcaactaacaacaattcaattatccataacttcataca 25643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0610 (Bit Score: 104; Significance: 9e-52; HSPs: 2)
Name: scaffold0610
Description:

Target: scaffold0610; HSP #1
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 168 - 357
Target Start/End: Complemental strand, 563 - 371
Alignment:
Q  168 acaatttatcaattcacccaattaagcactt-ttcataccaataattgaaaatt-gcaataagtgattatgatgaattctaacccccttaccttagatag 265  Q
    |||||| |||||||||||||||||||||||| ||||||| |||||||||||| | ||||||| |||| |||||||||||||||||||||||||||| |||    
T  563 acaattaatcaattcacccaattaagcacttattcatac-aataattgaaaaatagcaataaatgat-atgatgaattctaacccccttaccttagttag 466  T
Q  266 agtaatc--cctagcttaggcttcaattttgctcctagctctcatccaatccttgattcttcaagttc-ctcttctctctaacccttttctcctt 357  Q
    | |||||  ||||| |||||||||||||||| |||||||||||  ||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  465 attaatctccctagattaggcttcaattttgatcctagctctctcccaatccttgattcttcaagttctcccttctctctaacccttttctcctt 371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0610; HSP #2
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 16 - 170
Target Start/End: Complemental strand, 763 - 610
Alignment:
Q  16 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctca 115  Q
    |||||||||| || ||||||||||||||||||||||||||||  ||||||| ||||||||||||||| ||||||||||||||||||||||||  ||||||    
T  763 caacaacaac-atcaattgatcatgaaacttatcacaattcatcaacaacatagcataattcaccaaatgagcatattttcaacatataccattttctca 665  T
Q  116 tactttgaacatgtgattcaactaacaacaattcaattatccataacttcataca 170  Q
    |||||||||||||| |||||| |||||||||||| ||||||||||| ||||||||    
T  664 tactttgaacatgtaattcaattaacaacaattctattatccataatttcataca 610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 104; Significance: 9e-52; HSPs: 4)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 15 - 170
Target Start/End: Original strand, 1376 - 1530
Alignment:
Q  15 tcaacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctc 114  Q
    ||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||| || ||||| | || ||    
T  1376 tcaacaacaac-atcaattgatcatgaaacttatcacaattcaacaacaacaaagcataattcaccaattaagcatattttcatcacatacccatttttc 1474  T
Q  115 atactttgaacatgtgattcaactaacaacaattcaattatccataacttcataca 170  Q
    ||||||||||||||| ||||||| | ||||||||||||||||||||||||||||||    
T  1475 atactttgaacatgtaattcaaccaccaacaattcaattatccataacttcataca 1530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359; HSP #2
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 168 - 356
Target Start/End: Complemental strand, 11640 - 11453
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagatagag 267  Q
    |||||| ||||||||| ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||      
T  11640 acaattaatcaattcatccaattaagcacttttcatacaaataattgaaaattacaataagtgattatgatgaattctaacccccttaccttag-taggt 11542  T
Q  268 taa--tccctagcttaggcttcaattttgctcctagctctcatccaatccttgattcttcaagttcctcttctctctaacccttttctcct 356  Q
    |||  || ||||||||||||||||||||||||||||||     |||||||||||||||||||| ||||||||||||| |||| ||||||||    
T  11541 taatctctctagcttaggcttcaattttgctcctagcttaaccccaatccttgattcttcaag-tcctcttctctct-acccatttctcct 11453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359; HSP #3
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 168 - 356
Target Start/End: Original strand, 1577 - 1764
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagatagag 267  Q
    |||||| |||||||||  ||||||| |||||||||||| ||||||||||  |||||||||||||||||||||||||||||||||||| |||||| |||      
T  1577 acaattaatcaattcattcaattaaccacttttcatacaaataattgaa--ttgcaataagtgattatgatgaattctaacccccttgccttagttaggt 1674  T
Q  268 taa--tccctagcttaggcttcaattttgctcctagctc-tcatccaatccttgattcttcaagttcctcttctctctaacccttttctcct 356  Q
    |||  || ||||||||||||||||||||||||||||||| ||  |||| ||||||||||||||| ||||||||||||| |||||||||||||    
T  1675 taatctctctagcttaggcttcaattttgctcctagctcttctcccaacccttgattcttcaag-tcctcttctctct-acccttttctcct 1764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359; HSP #4
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 30 - 170
Target Start/End: Complemental strand, 11828 - 11687
Alignment:
Q  30 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcat--actttgaacat 127  Q
    ||||||||||||||||| ||||||||||  |||||||| ||||||||||| |||||||||||||||||||| ||||| | || ||||  |||||||||||    
T  11828 aattgatcatgaaacttttcacaattcatcaacaacaatgcataattcactaattgagcatattttcaacacataccca-ttttcatacactttgaacat 11730  T
Q  128 gtgattcaactaacaacaattcaattatccataacttcataca 170  Q
    || ||||||| || |||||||||||||| ||||||||||||||    
T  11729 gtaattcaaccaagaacaattcaattattcataacttcataca 11687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 104; Significance: 9e-52; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 15 - 170
Target Start/End: Complemental strand, 11756 - 11602
Alignment:
Q  15 tcaacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctc 114  Q
    ||||||||||| || |||||||||||||||| |||||||||||| ||||||||||||||||||||||||| ||||||||||||||| ||||| | || ||    
T  11756 tcaacaacaac-ataaattgatcatgaaactgatcacaattcaacaacaacaaagcataattcaccaattaagcatattttcaacacatacccatttttc 11658  T
Q  115 atactttgaacatgtgattcaactaacaacaattcaattatccataacttcataca 170  Q
    ||||||||||||||| ||||||  ||||||||||||||||||||||||||||||||    
T  11657 atactttgaacatgtaattcaatcaacaacaattcaattatccataacttcataca 11602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 168 - 356
Target Start/End: Complemental strand, 11555 - 11368
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagatagag 267  Q
    |||||| ||||||||| | |||||| |||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| |||||||| |||      
T  11555 acaattaatcaattcaac-aattaaacacttttcatacaaataattaaaaattgcaataagtgattatgatgaattctaacccccataccttagttaggt 11457  T
Q  268 taa--tccctagcttaggcttcaattttgctcctagctctcatccaatccttgattcttcaagttcctcttctctctaacccttttctcct 356  Q
    |||  || |||||||||||||||||||||||||||||||||   | | ||||||||||||||| | ||||||||||| |||| ||||||||    
T  11456 taatctctctagcttaggcttcaattttgctcctagctctccctccacccttgattcttcaag-tactcttctctct-acccatttctcct 11368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 103; Significance: 4e-51; HSPs: 5)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 168 - 357
Target Start/End: Original strand, 31470 - 31661
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaa-ttgcaataagtgattatgatgaattctaacccccttaccttagataga 266  Q
    |||||| |||||||| |||||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| |||     
T  31470 acaattaatcaattcgcccaattaagcacttttcatac-aataattgaaaaattgcaataa-tgattatgatgaattctaacccccttaccttagttagg 31567  T
Q  267 gtaatccct--agcttaggcttcaattttgctcctagctctcatccaatccttgattcttcaagttc-ctcttctctctaacccttttctcctt 357  Q
     ||||| ||  |||||||||||||||||||||||||| | ||  ||||||||||| ||||||||||| | ||||||||||||||||||||||||    
T  31568 ttaatctctctagcttaggcttcaattttgctcctagatttcccccaatccttgactcttcaagttctcccttctctctaacccttttctcctt 31661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 168 - 357
Target Start/End: Complemental strand, 47536 - 47345
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaa-ttgcaataagtgattatgatgaattctaacccccttaccttagataga 266  Q
    |||||| |||||||| |||||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| |||     
T  47536 acaattaatcaattcgcccaattaagcacttttcatac-aataattgaaaaattgcaataa-tgattatgatgaattctaacccccttaccttagttagg 47439  T
Q  267 gtaatccct--agcttaggcttcaattttgctcctagctctcatccaatccttgattcttcaagttc-ctcttctctctaacccttttctcctt 357  Q
     ||||| ||  |||||||||||||||||||||||||| | ||  ||||||||||| ||||||||||| | ||||||||||||||||||||||||    
T  47438 ttaatctctctagcttaggcttcaattttgctcctagatttcccccaatccttgactcttcaagttctcccttctctctaacccttttctcctt 47345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #3
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 35 - 170
Target Start/End: Original strand, 21590 - 21724
Alignment:
Q  35 atcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatgtgattc 134  Q
    |||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||| ||||    
T  21590 atcatgaaacttatcacaattcatcaacaacatagcataattcaccaattgagcatattttcaacatataccattttctcatactttgaacatgtaattc 21689  T
Q  135 aactaacaacaattcaattatccataacttcataca 170  Q
    ||||||||||||| ||||||| ||||||||||||||    
T  21690 aactaacaacaatccaattat-cataacttcataca 21724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #4
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 30 - 170
Target Start/End: Original strand, 31284 - 31423
Alignment:
Q  30 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatgt 129  Q
    ||||||| ||||||||||||||||||||  ||||||| || |||||| ||||||||||||||||||||||||||||||  |||||||||||||||||| |    
T  31284 aattgataatgaaacttatcacaattcatcaacaacatagtataatttaccaattgagcatattttcaacatataccattttctcatactttgaacattt 31383  T
Q  130 gattcaactaacaacaattcaattatccataacttcataca 170  Q
     ||||||||||||||||| ||||||| ||||||||||||||    
T  31384 aattcaactaacaacaatccaattat-cataacttcataca 31423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #5
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 168 - 357
Target Start/End: Original strand, 21771 - 21962
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaa-ttgcaataagtgattatgatgaattctaacccccttaccttagataga 266  Q
    |||||| |||||||| |||||||||||  ||||||||| |||||||||||| ||||||||| ||||||||||||||| ||||||||||||||||| |||     
T  21771 acaattaatcaattcgcccaattaagcctttttcatac-aataattgaaaaattgcaataa-tgattatgatgaattataacccccttaccttagttagg 21868  T
Q  267 gtaatccct--agcttaggcttcaattttgctcctagctctcatccaatccttgattcttcaagtt-cctcttctctctaacccttttctcctt 357  Q
     ||||| ||  | |||||||||||||||||||||||| | ||  ||||||||||||||||||||||  | |||||||||||||||||| |||||    
T  21869 ttaatctctctaccttaggcttcaattttgctcctagatttcccccaatccttgattcttcaagttatcccttctctctaacccttttgtcctt 21962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 103; Significance: 4e-51; HSPs: 2)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 168 - 361
Target Start/End: Original strand, 3579 - 3774
Alignment:
Q  168 acaatttatcaattcacccaattaagcactt-ttcataccaataattg-aaaattgcaataagtgattatgatgaattctaacccccttaccttagatag 265  Q
    |||||| ||||||| || ||||||||||||| ||||||| |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||| |||    
T  3579 acaattaatcaatt-actcaattaagcacttattcatac-aataattgtaaaattgcaataaatgattatgatgaattctaacccccttaccttagttag 3676  T
Q  266 agtaatccc--tagcttaggcttcaattttgctcctagctctcatccaatccttgattcttcaagttcctcttctctctaacccttttctcctttgct 361  Q
    | |||||||  || |||| |||||||||| ||||||||||||| |||||||||||| ||||||||||||||||||| ||||||||||||  |||||||    
T  3677 attaatccccctatcttaagcttcaatttagctcctagctctcttccaatccttgaatcttcaagttcctcttctcactaacccttttcctctttgct 3774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 30 - 167
Target Start/End: Original strand, 3392 - 3529
Alignment:
Q  30 aattgatcatgaaacttatcacaattcaataacaacaaagcataatt-caccaattgagcatattttcaacatataccaacttctcatactttgaacatg 128  Q
    ||||||||||||| |||||||||||||||  |||||| |||||||||  ||||||||||||||||||| ||||||||||  ||||||||||||||||||     
T  3392 aattgatcatgaatcttatcacaattcaactacaacatagcataattggaccaattgagcatattttc-acatataccactttctcatactttgaacatt 3490  T
Q  129 tgattcaactaacaacaattcaattatccataacttcat 167  Q
      |||   |||||||||||||||||||  ||||||||||    
T  3491 aaatttctctaacaacaattcaattataaataacttcat 3529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0589 (Bit Score: 99; Significance: 9e-49; HSPs: 2)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 168 - 361
Target Start/End: Original strand, 8065 - 8260
Alignment:
Q  168 acaatttatcaattcacccaattaagcactt-ttcataccaataattg-aaaattgcaataagtgattatgatgaattctaacccccttaccttagatag 265  Q
    |||||| ||||||| || ||||||||||||| ||||||| |||||||| ||||||||||||| |||||| |||||||||||||||||||||||||| |||    
T  8065 acaattaatcaatt-actcaattaagcacttattcatac-aataattgtaaaattgcaataaatgattacgatgaattctaacccccttaccttagttag 8162  T
Q  266 agtaatccc--tagcttaggcttcaattttgctcctagctctcatccaatccttgattcttcaagttcctcttctctctaacccttttctcctttgct 361  Q
    | |||||||  ||||||| |||||||||| ||||||||||||| |||||||||||| || |||||||||||||||| ||||||||||||  |||||||    
T  8163 attaatccccctagcttaagcttcaatttagctcctagctctcttccaatccttgaatcgtcaagttcctcttctcactaacccttttcctctttgct 8260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0589; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 78 - 167
Target Start/End: Original strand, 7927 - 8015
Alignment:
Q  78 accaattgagcatattttcaacatataccaacttctcatactttgaacatgtgattcaactaacaacaattcaattatccataacttcat 167  Q
    |||||||||||||||||||| |||||||||  |||||||||||||||||||  |||   |||||||||||||||||||  ||||||||||    
T  7927 accaattgagcatattttca-catataccactttctcatactttgaacatgaaatttctctaacaacaattcaattataaataacttcat 8015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 99; Significance: 9e-49; HSPs: 2)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 16 - 170
Target Start/End: Original strand, 81 - 234
Alignment:
Q  16 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctca 115  Q
    |||||||||| || ||||||||||||||||||||||||||||  ||| ||  |||||||||||| |||||||||||||||||||||||||||| ||||||    
T  81 caacaacaac-atcaattgatcatgaaacttatcacaattcatcaaccacgtagcataattcacgaattgagcatattttcaacatataccaatttctca 179  T
Q  116 tactttgaacatgtgattcaactaacaacaattcaattatccataacttcataca 170  Q
    |||||||||||||  ||||||| ||||||||||||||||| ||||||||||||||    
T  180 tactttgaacatgcaattcaaccaacaacaattcaattattcataacttcataca 234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 168 - 300
Target Start/End: Original strand, 278 - 411
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagata--g 265  Q
    |||||| || |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||  |    
T  278 acaattaattaattcacccaattaagcacttttcatacaaataattgaaaattgcaataagtgattatgatgaagactaacccccttaccttagataagg 377  T
Q  266 agtaatccctagcttaggcttcaattttgctccta 300  Q
    | |||| || | ||||||||||||||| |||||||    
T  378 attaat-ccaaacttaggcttcaatttagctccta 411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 97; Significance: 1e-47; HSPs: 7)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 168 - 356
Target Start/End: Complemental strand, 79877 - 79687
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagatagag 267  Q
    |||||| ||||||||| ||||||||||||||||||||| |||||||||||||| |||| |||||||||||| |||||||||||||||| ||||| |||      
T  79877 acaattaatcaattcatccaattaagcacttttcatacaaataattgaaaattacaatgagtgattatgatcaattctaacccccttagcttagttaggt 79778  T
Q  268 taa--tccctagcttaggcttcaattttgctcctagctctcatc-caatccttgattcttcaagttcctcttctctctaacccttttctcct 356  Q
    |||  || |||||||| ||||||||||| |||||||||||  || ||| ||||||||| ||||| |||||||||||||||||||||||||||    
T  79777 taatctctctagcttatgcttcaattttactcctagctcttctctcaacccttgattcctcaag-tcctcttctctctaacccttttctcct 79687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 15 - 170
Target Start/End: Original strand, 60865 - 61019
Alignment:
Q  15 tcaacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctc 114  Q
    ||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || ||||||| |||| ||||| | || ||    
T  60865 tcaacaacaac-atcaattgatcatgaaacttatcacaattcaacaacaacaaagcataattcaccaattaagtatatttttaacacatacccatttttc 60963  T
Q  115 atactttgaacatgtgattcaactaacaacaattcaattatccataacttcataca 170  Q
    ||||||||||||||| ||||||| ||||||||||||||||| |||||| |||||||    
T  60964 atactttgaacatgtaattcaaccaacaacaattcaattattcataacatcataca 61019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 168 - 356
Target Start/End: Original strand, 61066 - 61256
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaa-ttgcaataagtgattatgatgaattctaacccccttaccttagataga 266  Q
    |||||| ||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||      
T  61066 acaattaatcaattcacccaattaagcacttttcatacaaataattgaaaaattgcaataagtgattatgatgaattctaacccccttaccttagttaag 61165  T
Q  267 gtaa--tccctagcttaggcttcaattttgctcctagctc-tcatccaatccttgattcttcaagttcctcttctctctaacccttttctcct 356  Q
     |||  || |||||||| |||||||||||||||||| ||| ||  ||||  |||||||||||||| ||||||||||||| | |||||||||||    
T  61166 ttaatttctctagcttaagcttcaattttgctcctatctcttctcccaactcttgattcttcaag-tcctcttctctct-atccttttctcct 61256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 33 - 170
Target Start/End: Complemental strand, 70793 - 70655
Alignment:
Q  33 tgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatgtgat 132  Q
    |||||||||||||||||||||||||  ||||| || |||||||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||| ||    
T  70793 tgatcatgaaacttatcacaattcatcaacaataatgcataattcaccaattgagcatattttcaacacatacctacttttcatactttgaacatgtaat 70694  T
Q  133 tcaactaacaacaattcaattatcca-taacttcataca 170  Q
    ||||||||||| || |||||||| || ||||||||||||    
T  70693 tcaactaacaataaatcaattattcattaacttcataca 70655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #5
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 168 - 356
Target Start/End: Complemental strand, 70608 - 70422
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagatagag 267  Q
    |||||| ||||| ||| |||| |||||||||||| ||| |||||||||||||| |||| ||| ||||||    ||||||||||||||||||||| |||      
T  70608 acaattaatcaactcatccaaataagcacttttcttacaaataattgaaaattacaatgagttattatg----attctaacccccttaccttagttaggt 70513  T
Q  268 taa--tccctagcttaggcttcaattttgctcctagctctcatc-caatccttgattcttcaagttcctcttctctctaacccttttctcct 356  Q
    |||  || |||| |||||||||||||||| ||||||||||  ||  || ||||||||| ||||| |||||||||| ||||||||||||||||    
T  70512 taatctctctaggttaggcttcaattttgatcctagctcttctctgaacccttgattcctcaag-tcctcttctcactaacccttttctcct 70422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 349
Target Start/End: Original strand, 172211 - 172334
Alignment:
Q  229 tgattatgatgaattctaacccccttaccttagat--agagtaatccctagcttaggcttcaattttgctcct-agctctcatccaatccttgattcttc 325  Q
    |||||||||| ||  ||||||||||||||||||||  ||| ||||||| | ||||||||||| ||| |||||| ||||| | |||||| |||||||||||    
T  172211 tgattatgataaagactaacccccttaccttagataaagattaatccc-aacttaggcttcactttagctcctaagctcac-tccaat-cttgattcttc 172307  T
Q  326 aag---ttcctcttctctctaaccctt 349  Q
    |||   | ||| |||||||||||||||    
T  172308 aagctctcccttttctctctaaccctt 172334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 349
Target Start/End: Original strand, 177914 - 178037
Alignment:
Q  229 tgattatgatgaattctaacccccttaccttagat--agagtaatccctagcttaggcttcaattttgctcct-agctctcatccaatccttgattcttc 325  Q
    |||||||||| ||  ||||||||||||||||||||  ||| ||||||| | ||||||||||| ||| |||||| ||||| | |||||| |||||||||||    
T  177914 tgattatgataaagactaacccccttaccttagataaagattaatccc-aacttaggcttcactttagctcctaagctcac-tccaat-cttgattcttc 178010  T
Q  326 aag---ttcctcttctctctaaccctt 349  Q
    |||   | ||| |||||||||||||||    
T  178011 aagctctcccttttctctctaaccctt 178037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0816 (Bit Score: 96; Significance: 5e-47; HSPs: 1)
Name: scaffold0816
Description:

Target: scaffold0816; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 168 - 356
Target Start/End: Complemental strand, 3052 - 2865
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagatagag 267  Q
    |||||| ||||||||| ||||||||||| || |||||| |||||||||||||| ||| |||||||||||||||||||||||||||||||||||| |||      
T  3052 acaattaatcaattcatccaattaagcatttatcatacaaataattgaaaattacaa-aagtgattatgatgaattctaacccccttaccttag-taggt 2955  T
Q  268 ta--atccctagcttaggcttcaattttgctcctagctctcatccaatccttgattcttcaagttcctcttctctctaacccttttctcct 356  Q
    ||   |||||||||||||||||||||||||||||||||     |||||||||||||||||||| || ||||||||||||||||||||||||    
T  2954 tagtctccctagcttaggcttcaattttgctcctagcttaaccccaatccttgattcttcaag-tcatcttctctctaacccttttctcct 2865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 96; Significance: 5e-47; HSPs: 4)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 31 - 170
Target Start/End: Original strand, 146675 - 146814
Alignment:
Q  31 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatgtg 130  Q
    |||||||||||||||||||||||||||  ||||||  ||||||||||||||||||||||||||||||||| ||||| | || |||||||||||||||||     
T  146675 attgatcatgaaacttatcacaattcatcaacaacctagcataattcaccaattgagcatattttcaacacatacccatttttcatactttgaacatgta 146774  T
Q  131 attcaactaacaacaattcaattatccataacttcataca 170  Q
    ||||||||||||||| ||||||||| ||||||||||||||    
T  146775 attcaactaacaacagttcaattatacataacttcataca 146814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 229 - 349
Target Start/End: Original strand, 146907 - 147030
Alignment:
Q  229 tgattatgatgaattctaacccccttaccttagat--agagtaatccctagcttaggcttcaattttgctcct-agctctcatccaatccttgattcttc 325  Q
    |||||||||| ||  ||||||||||||||||||||  ||| ||||||| | ||||||||||||||| |||||| ||||| | |||||| |||||||||||    
T  146907 tgattatgataaagactaacccccttaccttagataaagattaatccc-aacttaggcttcaatttagctcctaagctcac-tccaat-cttgattcttc 147003  T
Q  326 aag---ttcctcttctctctaaccctt 349  Q
    |||   | |||||||||||||||||||    
T  147004 aagctctccctcttctctctaaccctt 147030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 156
Target Start/End: Original strand, 53420 - 53545
Alignment:
Q  31 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaatt-gagcatattttcaacatataccaacttctcatactttgaacatgt 129  Q
    ||||| |||||| || |||||||||||  ||||| | ||||||||| | || || ||||||| || ||||||||| || |||| |||||||||||||||     
T  53420 attgaacatgaatctcatcacaattcatcaacaaaatagcataattgaacatttagagcataatt-caacatataacaccttcacatactttgaacatgc 53518  T
Q  130 gattcaactaacaacaattcaattatc 156  Q
     |||  || ||||||||||||||||||    
T  53519 aatttcaccaacaacaattcaattatc 53545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 260
Target Start/End: Original strand, 53623 - 53699
Alignment:
Q  186 caattaagcacttt-tcataccaataattgaaaa-ttgcaataagtgattatgat-gaattctaacccccttacctta 260  Q
    |||||||||||||  |||||| |||||||||||| || || ||| |||||||||| ||||||||||||||||||||||    
T  53623 caattaagcacttaatcatac-aataattgaaaaattacactaaatgattatgattgaattctaacccccttacctta 53699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0673 (Bit Score: 95; Significance: 2e-46; HSPs: 4)
Name: scaffold0673
Description:

Target: scaffold0673; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 168 - 356
Target Start/End: Complemental strand, 6832 - 6646
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagatagag 267  Q
    |||||| |||||||||||||||||||||||  |||||| |||||||||||||||||||||||||||||||||||||||||||||   ||||||| |||      
T  6832 acaattaatcaattcacccaattaagcactgatcatacaaataattgaaaattgcaataagtgattatgatgaattctaacccc---accttagttaggt 6736  T
Q  268 taa--tccctagcttaggcttcaattttgctcctagctc-tcatccaatccttgattcttcaagttcctcttctctctaacccttttctcct 356  Q
    |||  || |||||||||||||||||||||||||||| || ||  |||| ||||||||||||||||||| ||||||||| |||||||||||||    
T  6735 taatctctctagcttaggcttcaattttgctcctagatcttctcccaacccttgattcttcaagttcc-cttctctct-acccttttctcct 6646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0673; HSP #2
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 175 - 343
Target Start/End: Complemental strand, 802 - 633
Alignment:
Q  175 atcaattcacccaattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagatagagta--atc 272  Q
    |||||||||| ||||||||||||| |||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||  ||   ||    
T  802 atcaattcactcaattaagcacttatcatacaaataattgaaaattacaataagtgattatgatgaattctaacccccttaccttag-taggttactctc 704  T
Q  273 cctagcttaggcttcaattttgctcctagctc-tcatccaatccttgattcttcaagttcctcttctctcta 343  Q
     ||||||||||||||||||||||||||||||| ||  |||| ||||||||||| ||| ||||||||||||||    
T  703 tctagcttaggcttcaattttgctcctagctcttctcccaacccttgattcttgaag-tcctcttctctcta 633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0673; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 30 - 170
Target Start/End: Complemental strand, 996 - 856
Alignment:
Q  30 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatgt 129  Q
    |||||||||||||||||||||||| |||  || ||||| |||||||||||||||||||||||||||||||  ||||| | || |||||||||||||||||    
T  996 aattgatcatgaaacttatcacaaatcatcaataacaatgcataattcaccaattgagcatattttcaactcatacccatttttcatactttgaacatgt 897  T
Q  130 gattcaactaacaacaattcaattatccataacttcataca 170  Q
     ||||| ||||||||||| ||||||| ||||||||||||||    
T  896 aattcatctaacaacaatccaattattcataacttcataca 856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0673; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 30 - 170
Target Start/End: Complemental strand, 7019 - 6879
Alignment:
Q  30 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcat--actttgaacat 127  Q
    ||||||||||||||||||||||||||||  |||||||| |||||||||||||||||||||||||||| ||| ||||| | || ||||  ||| |||||||    
T  7019 aattgatcatgaaacttatcacaattcatcaacaacaatgcataattcaccaattgagcatattttc-acacataccca-ttttcatacactctgaacat 6922  T
Q  128 gtgattcaactaacaacaattcaattatccataacttcataca 170  Q
    || ||||||| ||||||||||||| ||| ||||||||||||||    
T  6921 gtaattcaaccaacaacaattcaactattcataacttcataca 6879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 94; Significance: 8e-46; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 168 - 352
Target Start/End: Complemental strand, 89852 - 89666
Alignment:
Q  168 acaatttatcaattcacccaattaagcactt-ttcataccaataattgaaaattgcaataagt-gattatgatgaattctaacccccttaccttagatag 265  Q
    |||||| ||||||| | |||||||| ||||| ||||||| |||||||||||||| || |||   |||||||||||||||||||||||||||||||| |||    
T  89852 acaattaatcaatt-atccaattaatcacttattcatac-aataattgaaaattacactaaaaagattatgatgaattctaacccccttaccttagttag 89755  T
Q  266 agtaatc--cctagcttaggcttcaattttgctcctagctctcatccaatccttgattcttcaagttcctcttctctctaacccttttc 352  Q
    | |||||  |||||||||||||||||||| ||||||||||||| | ||||||||||||||||||||||| |||||||||||||||||||    
T  89754 attaatctccctagcttaggcttcaatttagctcctagctctctttcaatccttgattcttcaagttccacttctctctaacccttttc 89666  T

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Target: scaffold1164 (Bit Score: 92; Significance: 1e-44; HSPs: 3)
Name: scaffold1164
Description:

Target: scaffold1164; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 31 - 170
Target Start/End: Original strand, 1455 - 1594
Alignment:
Q  31 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatgtg 130  Q
    |||||||||||||||||||||||||||  ||  ||| | ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| |     
T  1455 attgatcatgaaacttatcacaattcatcaatcacataacataattcaacaattgagcatattttcaacatataccaatttctcatactttgaacatata 1554  T
Q  131 attcaactaacaacaattcaattatccataacttcataca 170  Q
    ||||||| ||||||||||||||||| ||||||||||||||    
T  1555 attcaaccaacaacaattcaattattcataacttcataca 1594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1164; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 168 - 260
Target Start/End: Original strand, 1641 - 1732
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttacctta 260  Q
    |||||| |||||||||||||||||||||||| |||| | |||||||||||||| ||| ||||||||||||||||  |||||||||||||||||    
T  1641 acaattaatcaattcacccaattaagcacttatcatccaaataattgaaaattacaa-aagtgattatgatgaacactaacccccttacctta 1732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1164; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 319 - 349
Target Start/End: Original strand, 1793 - 1823
Alignment:
Q  319 attcttcaagttcctcttctctctaaccctt 349  Q
    |||||||||||||||||||||||||||||||    
T  1793 attcttcaagttcctcttctctctaaccctt 1823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 92; Significance: 1e-44; HSPs: 2)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 168 - 355
Target Start/End: Original strand, 15133 - 15319
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagatagag 267  Q
    |||||| ||||||||| |||||||||||||| ||||||  ||||||||||||| ||| |||||||||||||||||||||||||||||||||||| |||      
T  15133 acaattaatcaattcatccaattaagcacttatcatacatataattgaaaattacaa-aagtgattatgatgaattctaacccccttaccttag-taggt 15230  T
Q  268 taa--tccctagcttaggcttcaattttgctcctagctc-tcatccaatccttgattcttcaagttcctcttctctctaacccttttctcc 355  Q
    |||  || ||||||||||||||||||||||||||||||| ||  |||| ||||||||||||||| ||||||||||||| ||||||||||||    
T  15231 taatctctctagcttaggcttcaattttgctcctagctcttcccccaacccttgattcttcaag-tcctcttctctct-acccttttctcc 15319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 30 - 170
Target Start/End: Original strand, 14947 - 15086
Alignment:
Q  30 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcat--actttgaacat 127  Q
    ||||||||||||||| ||||||||||||  |||||||| |||||||||||||||||||||||||||| ||| ||||| | || ||||  |||||||||||    
T  14947 aattgatcatgaaacatatcacaattcatcaacaacaatgcataattcaccaattgagcatattttc-acacataccca-ttttcatacactttgaacat 15044  T
Q  128 gtgattcaactaacaacaattcaattatccataacttcataca 170  Q
    || ||  ||||||| ||||||||||||| ||||||||||||||    
T  15045 gtaatctaactaac-acaattcaattattcataacttcataca 15086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 91; Significance: 5e-44; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 206 - 352
Target Start/End: Complemental strand, 70256 - 70107
Alignment:
Q  206 caataattgaaaattgca-ataagtgattatgatgaattctaacccccttaccttagatagagtaatccc--tagcttaggcttcaattttgctcctagc 302  Q
    ||||||||||||||| || | || ||||||||||||||||||||||||||||||||| |||| |||||||  ||||||| |||||| |||||||||||||    
T  70256 caataattgaaaatttcacaaaaatgattatgatgaattctaacccccttaccttagttagattaatccccctagcttaagcttcatttttgctcctagc 70157  T
Q  303 tctcatccaatccttgattcttcaagttcctcttctctctaacccttttc 352  Q
    |||| |||||||||||||||||||||||||||| ||||||| ||||||||    
T  70156 tctcttccaatccttgattcttcaagttcctctactctctaccccttttc 70107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447 (Bit Score: 87; Significance: 1e-41; HSPs: 4)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 168 - 356
Target Start/End: Original strand, 4824 - 5009
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagatagag 267  Q
    |||||| ||||||||| |||||||||||||| |||||| ||||||||||||||   | |||||||||||||||||||||||||||||||||||| |||      
T  4824 acaattaatcaattcatccaattaagcacttatcatacaaataattgaaaatt---acaagtgattatgatgaattctaacccccttaccttag-taggt 4919  T
Q  268 taa--tccctagcttaggcttcaattttgctcctagctc-tcatccaatccttgattcttcaagttcctcttctctctaacccttttctcct 356  Q
    |||  || ||||||||||||||||||||||||||||||| ||  |||| ||||||||||||||| |||||||||||||  ||||||||||||    
T  4920 taatctctctagcttaggcttcaattttgctcctagctcttctcccaacccttgattcttcaag-tcctcttctctct-gcccttttctcct 5009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 168 - 356
Target Start/End: Original strand, 9438 - 9623
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagatagag 267  Q
    |||||| ||||||||| |||||||||||||| |||||| ||||||||||||||   | |||||||||||||||||||||||||||||||||||| |||      
T  9438 acaattaatcaattcatccaattaagcacttatcatacaaataattgaaaatt---acaagtgattatgatgaattctaacccccttaccttag-taggt 9533  T
Q  268 taa--tccctagcttaggcttcaattttgctcctagctc-tcatccaatccttgattcttcaagttcctcttctctctaacccttttctcct 356  Q
    |||  || ||||||||||||||||||||||||||||||| ||  |||| ||||||||||||||| |||||||||||||  ||||||||||||    
T  9534 taatctctctagcttaggcttcaattttgctcctagctcttctcccaacccttgattcttcaag-tcctcttctctct-gcccttttctcct 9623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 16 - 170
Target Start/End: Original strand, 4623 - 4777
Alignment:
Q  16 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattca-ccaattgagcatattttcaacatataccaacttctc 114  Q
    |||||||||| || ||||||  |||||  ||||||||||| || ||||||| ||||||||||| |||||||||||||||||||||| ||||| | || ||    
T  4623 caacaacaac-atcaattgaaaatgaatattatcacaattaaacaacaacatagcataattcaaccaattgagcatattttcaacacatacccatttttc 4721  T
Q  115 atactttgaacatgtgattcaactaacaacaattcaattatccataacttcataca 170  Q
    ||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||    
T  4722 atactttgaacatgtaattcaaccaacaacaattcaattattcataacttcataca 4777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 16 - 170
Target Start/End: Original strand, 9237 - 9391
Alignment:
Q  16 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattca-ccaattgagcatattttcaacatataccaacttctc 114  Q
    |||||||||| || ||||||  |||||  ||||||||||| || ||||||| ||||||||||| |||||||||||||||||||||| ||||| | || ||    
T  9237 caacaacaac-atcaattgaaaatgaatattatcacaattaaacaacaacatagcataattcaaccaattgagcatattttcaacacatacccatttttc 9335  T
Q  115 atactttgaacatgtgattcaactaacaacaattcaattatccataacttcataca 170  Q
    ||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||    
T  9336 atactttgaacatgtaattcaaccaacaacaattcaattattcataacttcataca 9391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 87; Significance: 1e-41; HSPs: 2)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 168 - 356
Target Start/End: Original strand, 7433 - 7618
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagatagag 267  Q
    |||||| ||||||||| |||||||||||||| |||||| ||||||||||||||   | |||||||||||||||||||||||||||||||||||| |||      
T  7433 acaattaatcaattcatccaattaagcacttatcatacaaataattgaaaatt---acaagtgattatgatgaattctaacccccttaccttag-taggt 7528  T
Q  268 taa--tccctagcttaggcttcaattttgctcctagctc-tcatccaatccttgattcttcaagttcctcttctctctaacccttttctcct 356  Q
    |||  || ||||||||||||||||||||||||||||||| ||  |||| ||||||||||||||| |||||||||||||  ||||||||||||    
T  7529 taatctctctagcttaggcttcaattttgctcctagctcttctcccaacccttgattcttcaag-tcctcttctctct-gcccttttctcct 7618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383; HSP #2
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 45 - 170
Target Start/End: Original strand, 7260 - 7386
Alignment:
Q  45 ttatcacaattcaataacaacaaagcataattca-ccaattgagcatattttcaacatataccaacttctcatactttgaacatgtgattcaactaacaa 143  Q
    ||||||||||| || ||||||| ||||||||||| |||||||||||||||||||||| ||||| | || ||||||||||||||||| ||||||| |||||    
T  7260 ttatcacaattaaacaacaacatagcataattcaaccaattgagcatattttcaacacatacccatttttcatactttgaacatgtaattcaaccaacaa 7359  T
Q  144 caattcaattatccataacttcataca 170  Q
    |||||||||||| ||||||||||||||    
T  7360 caattcaattattcataacttcataca 7386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 87; Significance: 1e-41; HSPs: 5)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 15 - 170
Target Start/End: Complemental strand, 255002 - 254848
Alignment:
Q  15 tcaacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctc 114  Q
    ||||||||||| || ||||||||||||||||||||||||||||  |||||||| |||||||||||||||||||||||||||||||| ||||| | || ||    
T  255002 tcaacaacaac-atcaattgatcatgaaacttatcacaattcatcaacaacaatgcataattcaccaattgagcatattttcaacacataccca-ttttc 254905  T
Q  115 at--actttgaacatgtgattcaactaacaacaattcaattatccataacttcataca 170  Q
    ||  ||||||||||||| |||||||| |||||||||||||||| ||||||||||||||    
T  254904 atacactttgaacatgtaattcaact-acaacaattcaattattcataacttcataca 254848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 15 - 170
Target Start/End: Complemental strand, 261608 - 261454
Alignment:
Q  15 tcaacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctc 114  Q
    ||||||||||| || ||||||||||||||||||||||||||||  |||||||| |||||||||||||||||||||||||||||||| ||||| | || ||    
T  261608 tcaacaacaac-atcaattgatcatgaaacttatcacaattcatcaacaacaatgcataattcaccaattgagcatattttcaacacataccca-ttttc 261511  T
Q  115 at--actttgaacatgtgattcaactaacaacaattcaattatccataacttcataca 170  Q
    ||  ||||||||||||| |||||||| || ||||||||||||| ||||||||||||||    
T  261510 atacactttgaacatgtaattcaact-actacaattcaattattcataacttcataca 261454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 168 - 356
Target Start/End: Complemental strand, 254801 - 254614
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagatagag 267  Q
    |||||| ||||||||| |||||||| ||||| |||||| ||||||||||| || |||||||||||||||||||||| || |||||||||||||| |||      
T  254801 acaattaatcaattcatccaattaaacacttatcatacaaataattgaaa-ttacaataagtgattatgatgaattatatcccccttaccttag-taggt 254704  T
Q  268 taa--tccctagcttaggcttcaattttgctcctagctc-tcatccaatccttgattcttcaagttcctcttctctctaacccttttctcct 356  Q
    |||  || ||||||||| ||||||||||||||||||||| ||  |||| ||||||||||||||| ||||||||||||| |||||||||||||    
T  254703 taatctctctagcttagacttcaattttgctcctagctcttctcccaacccttgattcttcaag-tcctcttctctct-acccttttctcct 254614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #4
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 168 - 356
Target Start/End: Complemental strand, 261407 - 261220
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagatagag 267  Q
    |||||| ||||||||| |||||||| ||||| |||||| ||||||||||| || |||||||||||||||||||||| || |||||||||||||| |||      
T  261407 acaattaatcaattcatccaattaaacacttatcatacaaataattgaaa-ttacaataagtgattatgatgaattatatcccccttaccttag-taggt 261310  T
Q  268 taa--tccctagcttaggcttcaattttgctcctagctc-tcatccaatccttgattcttcaagttcctcttctctctaacccttttctcct 356  Q
    |||  || ||||||||| ||||||||||||||||||||| ||  |||| ||||||||||||||| ||||||||||||| |||||||||||||    
T  261309 taatctctctagcttagtcttcaattttgctcctagctcttctcccaacccttgattcttcaag-tcctcttctctct-acccttttctcct 261220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 229 - 339
Target Start/End: Complemental strand, 123118 - 123007
Alignment:
Q  229 tgattatgatgaattctaacccccttaccttagatagag--taatccctagcttaggcttcaattttgctccta-gctctcatccaatccttgattcttc 325  Q
    |||||||| ||||  |||||||||||||||||| || ||  ||||||| | ||||||||||||||| ||||||| |||| | |||||| |||||||||||    
T  123118 tgattatggtgaagactaacccccttaccttaggtaaagattaatcccaa-cttaggcttcaatttagctcctaagctcac-tccaattcttgattcttc 123021  T
Q  326 aagttcctcttctc 339  Q
    |||||| |||||||    
T  123020 aagttcttcttctc 123007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 86; Significance: 5e-41; HSPs: 4)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 229 - 351
Target Start/End: Original strand, 12590 - 12714
Alignment:
Q  229 tgattatgatgaattctaacccccttaccttagatagagtaatc--cctagcttaggcttcaattttgctcctagctctcatccaatccttgattcttca 326  Q
    ||||||||||||||||||||||||||||||||| |||| |||||  ||||||||||||||||||||| ||||||| |||| |||| ||||||||||||||    
T  12590 tgattatgatgaattctaacccccttaccttagttagattaatctccctagcttaggcttcaatttttctcctaggtctcttccactccttgattcttca 12689  T
Q  327 agttcctcttctctctaaccctttt 351  Q
    |||||| ||||||||||||||||||    
T  12690 agttccccttctctctaaccctttt 12714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 16 - 170
Target Start/End: Original strand, 6000 - 6155
Alignment:
Q  16 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattca-ccaattgagcatattttcaacatataccaactt-ct 113  Q
    |||||||||| || |||||| ||||||  |||||||||||||| ||| ||| ||||||||| | |||||||||||||||||||||||||||||  || ||    
T  6000 caacaacaac-atcaattgaacatgaatattatcacaattcaacaaccacatagcataatttaaccaattgagcatattttcaacatataccatttttct 6098  T
Q  114 catactttgaacatgtgattcaactaacaacaattcaattatccataacttcataca 170  Q
    |||||||||||||||  |||| || ||||||||| ||||||||||||||||||||||    
T  6099 catactttgaacatgaaattctaccaacaacaatccaattatccataacttcataca 6155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 632 - 572
Alignment:
Q  31 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 91  Q
    |||||||||||||| ||||||||||||  |||||| | |||||||||||||||||||||||    
T  632 attgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 168 - 227
Target Start/End: Original strand, 6202 - 6261
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattg-aaaattgcaataa 227  Q
    |||||| ||||||||||| |||||||||||||||||| ||||||||| |||||||||||||    
T  6202 acaattaatcaattcaccaaattaagcacttttcata-caataattgaaaaattgcaataa 6261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 86; Significance: 5e-41; HSPs: 2)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 229 - 361
Target Start/End: Complemental strand, 33653 - 33520
Alignment:
Q  229 tgattatgatgaattctaacccccttaccttagatagagtaat-ccctagcttaggcttcaattttgctcctagctctcatccaatccttgattcttcaa 327  Q
    ||||||||||||||||||||||||||||||||| |||| |||| |||||||| | |||||||||| |||| |||||||| |||||||||||| |||||||    
T  33653 tgattatgatgaattctaacccccttaccttagttagattaattccctagctcaagcttcaatttagctcatagctctcttccaatccttgaatcttcaa 33554  T
Q  328 gttcctcttctctctaacccttttctcctttgct 361  Q
    |||||||||||||||||||||||||  |||||||    
T  33553 gttcctcttctctctaacccttttcctctttgct 33520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095; HSP #2
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 16 - 166
Target Start/End: Complemental strand, 33915 - 33766
Alignment:
Q  16 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattc-accaattgagcatattttcaacatataccaacttc-t 113  Q
    |||||||||| || ||||||||||||| ||||||||||||||| ||||||| |||||||||| ||||||| |||||| |||||||||||| | ||||| |    
T  33915 caacaacaac-atcaattgatcatgaatcttatcacaattcaacaacaacatagcataattcaaccaatttagcata-tttcaacatataac-acttctt 33819  T
Q  114 catactttgaacatgtgattcaactaacaacaattcaattatccataacttca 166  Q
    |||||||| ||||||  |||| ||||||||||||||||||||||| |||||||    
T  33818 catactttaaacatgaaattccactaacaacaattcaattatccacaacttca 33766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 86; Significance: 5e-41; HSPs: 5)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 170 - 356
Target Start/End: Original strand, 164476 - 164661
Alignment:
Q  170 aatttatcaattcacccaattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagatagagta 269  Q
    |||| ||||||||| ||||||||||||||  ||||| | |||||||||||| ||| |||||||||||||||||||||||||||||||||||| |||  ||    
T  164476 aattaatcaattcatccaattaagcacttaccatacaattaattgaaaattacaa-aagtgattatgatgaattctaacccccttaccttag-taggtta 164573  T
Q  270 a--tccctagcttaggcttcaattttgctcctagctctcatccaatccttgattcttcaagttcctcttctctctaacccttttctcct 356  Q
    |  |||||||||||||||||||||||||||||||||     |||||| ||||||||||||| ||| ||||||||||| |||||||||||    
T  164574 atctccctagcttaggcttcaattttgctcctagcttaaccccaatcattgattcttcaag-tccccttctctctaagccttttctcct 164661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 32 - 170
Target Start/End: Original strand, 164290 - 164427
Alignment:
Q  32 ttgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcat--actttgaacatgt 129  Q
    ||||||||||||| ||||||||||||  |||||||| |||||||||||||||||||||||| ||| ||| ||||| | || ||||  |||||||||||||    
T  164290 ttgatcatgaaacatatcacaattcatcaacaacaatgcataattcaccaattgagcatatcttc-acacataccca-ttttcatacactttgaacatgt 164387  T
Q  130 gattcaactaacaacaattcaattatccataacttcataca 170  Q
     ||||||||||| ||||||||||||| ||||||||||||||    
T  164388 aattcaactaac-acaattcaattattcataacttcataca 164427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 162359 - 162299
Alignment:
Q  31 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 91  Q
    |||||||||||||| ||||||||||||  |||||| | ||| |||||||||||||||||||    
T  162359 attgatcatgaaacatatcacaattcatcaacaaccatgcagaattcaccaattgagcata 162299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 166445 - 166385
Alignment:
Q  31 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 91  Q
    |||||||||||||| ||||||||||||  |||||| | ||| |||||||||||||||||||    
T  166445 attgatcatgaaacatatcacaattcatcaacaaccatgcagaattcaccaattgagcata 166385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 319 - 349
Target Start/End: Complemental strand, 166103 - 166073
Alignment:
Q  319 attcttcaagttcctcttctctctaaccctt 349  Q
    |||||||||||||||||||||||||||||||    
T  166103 attcttcaagttcctcttctctctaaccctt 166073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0389 (Bit Score: 84; Significance: 8e-40; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 185 - 361
Target Start/End: Original strand, 10938 - 11116
Alignment:
Q  185 ccaattaagcactt-ttcataccaataattgaaaattgcaataag-tgattatgatgaattctaacccccttaccttagatagagtaatcc-ctagctta 281  Q
    |||||||| ||||| ||||||| ||||||||||||||  | |||  ||||||||||||||||||||||||||||||||| |||| |||||| ||||||      
T  10938 ccaattaatcacttattcatac-aataattgaaaattatactaaaatgattatgatgaattctaacccccttaccttagttagattaatcctctagctct 11036  T
Q  282 ggcttcaattttgctcctagctctcatccaatccttgattcttcaagttcctcttctctctaacccttttctcctttgct 361  Q
     |||||| |||||||||||||||||  |||||| ||||| ||||||||||||||||||||||||| ||||||||||||||    
T  11037 agcttcacttttgctcctagctctctcccaatctttgatccttcaagttcctcttctctctaaccattttctcctttgct 11116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158 (Bit Score: 83; Significance: 3e-39; HSPs: 3)
Name: scaffold0158
Description:

Target: scaffold0158; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 168 - 331
Target Start/End: Original strand, 25471 - 25634
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagata--g 265  Q
    |||||| ||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||  |    
T  25471 acaattaatcaattcatccaattaagcacttttcatacaaataattgaaaattgcaataagtgattatgatgaagactaacccccttaccttagataagg 25570  T
Q  266 agtaatccctagcttaggcttcaattttgctcctagctctcatccaatccttgattcttcaagttc 331  Q
    | ||| ||| | ||||||||||||||| |||||||   |||| | ||| |||||||||||||||||    
T  25571 attaa-cccaaacttaggcttcaatttagctccta-agctcacctaattcttgattcttcaagttc 25634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158; HSP #2
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 30 - 170
Target Start/End: Original strand, 25031 - 25171
Alignment:
Q  30 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatgt 129  Q
    |||||||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||   |||  | ||||  ||||||     
T  25031 aattgatcgtgaaacttatcacaattcaacaacaacaaaacataattcaccaattgagcatattttcaacatatacccttttcctacacttgaaacatga 25130  T
Q  130 gattcaactaacaacaattcaattatccataacttcataca 170  Q
      |||||||||||||||||||||||| ||||||||||||||    
T  25131 atttcaactaacaacaattcaattattcataacttcataca 25171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158; HSP #3
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 30 - 170
Target Start/End: Original strand, 25284 - 25424
Alignment:
Q  30 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatgt 129  Q
    |||||||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||   |||  | ||||  ||||||     
T  25284 aattgatcgtgaaacttatcacaattcaacaacaacaaaacataattcaccaattgagcatattttcaacatatacccttttcctacacttgaaacatga 25383  T
Q  130 gattcaactaacaacaattcaattatccataacttcataca 170  Q
      |||||||||||||||||||||||| ||||||||||||||    
T  25384 atttcaactaacaacaattcaattattcataacttcataca 25424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 81; Significance: 5e-38; HSPs: 4)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 30 - 170
Target Start/End: Original strand, 48220 - 48359
Alignment:
Q  30 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatgt 129  Q
    ||||||||||||||||| ||||||||||  ||||||||| |||||||||||||||||||||||||| |||| ||||| | || |||||||||||||||      
T  48220 aattgatcatgaaacttttcacaattcatcaacaacaaaacataattcaccaattgagcatatttt-aacacatacccatttttcatactttgaacataa 48318  T
Q  130 gattcaactaacaacaattcaattatccataacttcataca 170  Q
     |||||||||||||||||||||| || ||||||||||||||    
T  48319 aattcaactaacaacaattcaatcattcataacttcataca 48359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068; HSP #2
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 30 - 170
Target Start/End: Original strand, 61668 - 61807
Alignment:
Q  30 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcatactttgaacatgt 129  Q
    ||||||||||||||||| ||||||||||  ||||||||| |||||||||||||||||||||||||| |||| ||||| | || |||||||||||||||      
T  61668 aattgatcatgaaacttttcacaattcatcaacaacaaaacataattcaccaattgagcatatttt-aacacatacccatttttcatactttgaacataa 61766  T
Q  130 gattcaactaacaacaattcaattatccataacttcataca 170  Q
     |||||||||||||||||||||| || ||||||||||||||    
T  61767 aattcaactaacaacaattcaatcattcataacttcataca 61807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 168 - 356
Target Start/End: Original strand, 48406 - 48592
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagatagag 267  Q
    |||||| ||||||||| |||||||||||||| |||||| |||||||||||||| ||| ||||||||||||| |||||||| ||||||||||||| |||      
T  48406 acaattaatcaattcatccaattaagcacttatcatacaaataattgaaaattacaa-aagtgattatgataaattctaa-ccccttaccttag-taggt 48502  T
Q  268 taa--tccctagcttaggcttcaattttgctcctagctc-tcatccaatccttgattcttcaagttcctcttctctctaacccttttctcct 356  Q
    |||  || ||||||||| ||||||||||||||||||||| ||  |||| ||||||||||||||| || |||||||||| |||||||||||||    
T  48503 taatctctctagcttagacttcaattttgctcctagctcttctcccaacccttgattcttcaag-tcttcttctctct-acccttttctcct 48592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 168 - 356
Target Start/End: Original strand, 61854 - 62040
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagatagag 267  Q
    |||||| ||||||||| |||||||||||||| |||||| |||||||||||||| ||| ||||||||||||| |||||||| ||||||||||||| |||      
T  61854 acaattaatcaattcatccaattaagcacttatcatacaaataattgaaaattacaa-aagtgattatgataaattctaa-ccccttaccttag-taggt 61950  T
Q  268 taa--tccctagcttaggcttcaattttgctcctagctc-tcatccaatccttgattcttcaagttcctcttctctctaacccttttctcct 356  Q
    |||  || ||||||||| ||||||||||||||||||||| ||  |||| ||||||||||||||| || |||||||||| |||||||||||||    
T  61951 taatctctctagcttagacttcaattttgctcctagctcttctcccaacccttgattcttcaag-tcttcttctctct-acccttttctcct 62040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0409 (Bit Score: 79; Significance: 7e-37; HSPs: 2)
Name: scaffold0409
Description:

Target: scaffold0409; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 185 - 351
Target Start/End: Complemental strand, 1319 - 1150
Alignment:
Q  185 ccaattaagcactt-ttcataccaataattgaaaa-ttgcaataag-tgattatgatgaattctaacccccttaccttagatagagtaat-ccctagctt 280  Q
    |||||||||||||| ||||||| |||||||||||| || || |||  |||||||||||||||||||||||||||||||||||||| |||| |||||| |     
T  1319 ccaattaagcacttattcatac-aataattgaaaaattacactaatatgattatgatgaattctaacccccttaccttagatagattaattccctagatc 1221  T
Q  281 aggcttcaattttgctcctagctctcatccaatccttgattcttcaagttcctcttctctctaaccctttt 351  Q
    | |||||| ||| ||||||||||||| |||||||||||| |||||||| ||||||||||| ||||||||||    
T  1220 aagcttcactttagctcctagctctcttccaatccttgaatcttcaagctcctcttctctgtaaccctttt 1150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0409; HSP #2
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 185 - 351
Target Start/End: Complemental strand, 9574 - 9405
Alignment:
Q  185 ccaattaagcactt-ttcataccaataattgaaaa-ttgcaataag-tgattatgatgaattctaacccccttaccttagatagagtaat-ccctagctt 280  Q
    |||||||||||||| ||||||| |||||||||||| || || |||  |||||||||||||||||||||||||||||||||||||| |||| |||||| |     
T  9574 ccaattaagcacttattcatac-aataattgaaaaattacactaatatgattatgatgaattctaacccccttaccttagatagattaattccctagatc 9476  T
Q  281 aggcttcaattttgctcctagctctcatccaatccttgattcttcaagttcctcttctctctaaccctttt 351  Q
    | |||||| ||| ||||||||||||| |||||||||||| |||||||| ||||||||||| ||||||||||    
T  9475 aagcttcactttagctcctagctctcttccaatccttgaatcttcaagctcctcttctctgtaaccctttt 9405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 75; Significance: 2e-34; HSPs: 2)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 185 - 351
Target Start/End: Complemental strand, 1517 - 1348
Alignment:
Q  185 ccaattaagcactt-ttcataccaataattgaaaattg-caataag-tgattatgatgaattctaacccccttaccttagatagagtaat-ccctagctt 280  Q
    |||||||||||||| ||||||| ||||||||||||||  || |||  | ||||||||||||||||| |||||||||||||||||| |||| ||||||||     
T  1517 ccaattaagcacttattcatac-aataattgaaaatttacactaaaataattatgatgaattctaaaccccttaccttagatagattaattccctagctc 1419  T
Q  281 aggcttcaattttgctcctagctctcatccaatccttgattcttcaagttcctcttctctctaaccctttt 351  Q
    | |||||| ||| ||||||||||||| |||||||||||| |||||||| |||||||||| |||||||||||    
T  1418 aagcttcactttagctcctagctctcttccaatccttgaatcttcaagctcctcttctccctaaccctttt 1348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 185 - 351
Target Start/End: Complemental strand, 8662 - 8493
Alignment:
Q  185 ccaattaagcactt-ttcataccaataattgaaaattg-caataag-tgattatgatgaattctaacccccttaccttagatagagtaat-ccctagctt 280  Q
    |||||||||||||| ||||||| ||||||||||||||  || |||  | ||||||||||||||||| |||||||||||||||||| |||| ||||||||     
T  8662 ccaattaagcacttattcatac-aataattgaaaatttacactaaaataattatgatgaattctaaaccccttaccttagatagattaattccctagctc 8564  T
Q  281 aggcttcaattttgctcctagctctcatccaatccttgattcttcaagttcctcttctctctaaccctttt 351  Q
    | |||||| ||| ||||||||||||| |||||||||||| |||||||| |||||||||| |||||||||||    
T  8563 aagcttcactttagctcctagctctcttccaatccttgaatcttcaagctcctcttctccctaaccctttt 8493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 74; Significance: 7e-34; HSPs: 3)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 30 - 170
Target Start/End: Complemental strand, 15645 - 15505
Alignment:
Q  30 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttca-acatataccaacttctcatactttgaacatg 128  Q
    ||||||||||||||| ||||||||||||  |||||||| ||||||||||||||||||||||||||||| |||||  |||  || | |||||||||||||     
T  15645 aattgatcatgaaacatatcacaattcatcaacaacaatgcataattcaccaattgagcatattttcacacata-cccatttttttatactttgaacata 15547  T
Q  129 tgattcaactaacaacaattcaattatccataacttcataca 170  Q
      ||||||||||||||||||||||| ||||||||||||||||    
T  15546 caattcaactaacaacaattcaattgtccataacttcataca 15505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 168 - 260
Target Start/End: Complemental strand, 15458 - 15367
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttacctta 260  Q
    |||||| ||||||||| |||||||||||||| |||||| ||||||| |||||| ||| ||||||||||||||||| |||||||||||||||||    
T  15458 acaattaatcaattcatccaattaagcacttatcatacaaataatttaaaattacaa-aagtgattatgatgaatgctaacccccttacctta 15367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 319 - 349
Target Start/End: Complemental strand, 15306 - 15276
Alignment:
Q  319 attcttcaagttcctcttctctctaaccctt 349  Q
    |||||||||||||||||||||||||||||||    
T  15306 attcttcaagttcctcttctctctaaccctt 15276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0521 (Bit Score: 71; Significance: 4e-32; HSPs: 1)
Name: scaffold0521
Description:

Target: scaffold0521; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 186 - 361
Target Start/End: Original strand, 11372 - 11548
Alignment:
Q  186 caattaagcactt-ttcataccaataattgaaaa-ttgcaataagtgattatgatgaattctaacccccttaccttagatagagtaat-ccctagcttag 282  Q
    ||||||||||||| ||||||| |||||||||||| || || ||| ||||||||||||||| ||||||| ||||||||| |||| |||| ||||||||       
T  11372 caattaagcacttattcatac-aataattgaaaaattacactaaatgattatgatgaattataacccc-ttaccttagttagattaattccctagctcta 11469  T
Q  283 gcttcaattttgctcctagctctcatccaatccttgattcttcaagttcctcttctctctaacccttttctcctttgct 361  Q
    |||||| |||  |||||||||||| |||||||||||| |||||||| || ||||||||||||||||||||| |||||||    
T  11470 gcttcactttacctcctagctctcttccaatccttgaatcttcaagctcttcttctctctaacccttttcttctttgct 11548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 229 - 349
Target Start/End: Complemental strand, 22354 - 22233
Alignment:
Q  229 tgattatgatgaattctaacccccttaccttagatagagtaat-ccctagcttaggcttcaattttgctcctagctctcatccaatccttgattcttcaa 327  Q
    ||||||||||||||||||||||||||||||||| |||| |||| ||||| || | |||||| ||| ||||||||||||| |||||||||||| |||||||    
T  22354 tgattatgatgaattctaacccccttaccttagttagattaattccctacctcaagcttcactttagctcctagctctcttccaatccttgaatcttcaa 22255  T
Q  328 gttcctcttctctctaaccctt 349  Q
    | |||||| |||||||||||||    
T  22254 gctcctctcctctctaaccctt 22233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0260 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0260
Description:

Target: scaffold0260; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 226 - 356
Target Start/End: Original strand, 8665 - 8795
Alignment:
Q  226 aagtgattatgatgaattctaacccccttaccttagatagagtaa--tccctagcttaggcttcaattttgctcctagctctcatcc-aatccttgattc 322  Q
    |||||||||||||||||||||||||||||||||||| |||  |||  |||||||||||||||||||||||||||||||||||  ||| || |||||||||    
T  8665 aagtgattatgatgaattctaacccccttaccttag-taggttaatctccctagcttaggcttcaattttgctcctagctcttctcctaacccttgattc 8763  T
Q  323 ttcaagttcctcttctctctaacccttttctcct 356  Q
    |||||| ||||||||||| | |||||||||||||    
T  8764 ttcaag-tcctcttctctat-acccttttctcct 8795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 63; Significance: 3e-27; HSPs: 5)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 283 - 361
Target Start/End: Complemental strand, 93721 - 93643
Alignment:
Q  283 gcttcaattttgctcctagctctcatccaatccttgattcttcaagttcctcttctctctaacccttttctcctttgct 361  Q
    |||||| |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  93721 gcttcacttttgctcctagctctctcccaatccttgattcttcaagttcctcttctctctaaccctcttctcctttgct 93643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 55655 - 55715
Alignment:
Q  31 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 91  Q
    |||||||||||||||||||||||||||  |||||| | |||||||||||||||||||||||    
T  55655 attgatcatgaaacttatcacaattcatcaacaaccatgcataattcaccaattgagcata 55715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 229 - 330
Target Start/End: Original strand, 55905 - 56007
Alignment:
Q  229 tgattatgatgaattctaacccccttaccttagat--agagtaatccctagcttaggcttcaattttgctcct-agctctcatccaatccttgattcttc 325  Q
    |||||||||| ||  ||||||||||||||||||||  ||| ||||||| |  |||||||||||||| |||||| ||||||| |||||| |||||||||||    
T  55905 tgattatgataaagactaacccccttaccttagataaagattaatccc-aatttaggcttcaatttagctcctaagctctc-tccaattcttgattcttc 56002  T
Q  326 aagtt 330  Q
    |||||    
T  56003 aagtt 56007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 167
Target Start/End: Complemental strand, 93893 - 93810
Alignment:
Q  83 ttgagcatattttcaacatataccaacttctcatactttgaacatgtgattcaactaacaacaattcaattatccataacttcat 167  Q
    |||||||||||| ||||| ||||||  |||||||||||||||||||  |||   |||||||| ||||||||||| | ||||||||    
T  93893 ttgagcatattt-caacaaataccattttctcatactttgaacatgaaatttctctaacaaccattcaattatcaaaaacttcat 93810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 260
Target Start/End: Complemental strand, 104563 - 104518
Alignment:
Q  215 aaaattgcaataagtgattatgatgaattctaacccccttacctta 260  Q
    |||||| || ||| |||||||||||||||||||||| |||||||||    
T  104563 aaaattacactaaatgattatgatgaattctaacccacttacctta 104518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 62; Significance: 1e-26; HSPs: 2)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 186 - 336
Target Start/End: Complemental strand, 2286 - 2134
Alignment:
Q  186 caattaagcactt-ttcataccaataattgaaaattgcaataag-tgattatgatgaattctaacccccttaccttagatagagtaatcc-ctagcttag 282  Q
    ||||||||||||| ||||||| || |||| ||||||||| |||  ||||||||||||||||||||||||||||||||| ||||  ||| | || ||| |     
T  2286 caattaagcacttattcatac-aacaattaaaaattgcactaaaatgattatgatgaattctaacccccttaccttagttagatcaattctcttgctcaa 2188  T
Q  283 gcttcaattttgctcctagctctcatccaatccttgattcttcaagttcctctt 336  Q
    |||||| ||| ||||||||||||| |||||||||||| ||||||||||||||||    
T  2187 gcttcactttagctcctagctctcttccaatccttgaatcttcaagttcctctt 2134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 167
Target Start/End: Complemental strand, 2502 - 2353
Alignment:
Q  17 aacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaatt-gagcatattttcaacatataccaacttctca 115  Q
    ||||||||| || |||||| |||||  ||||||| ||||||| ||||||| ||||||||||| ||||| ||||||| || ||||||||  ||  ||||||    
T  2502 aacaacaac-atcaattgaacatgagtcttatcataattcaacaacaacatagcataattcatcaatttgagcataatt-caacatatgtcactttctca 2405  T
Q  116 tactttgaacatgtgattcaactaacaacaattcaattatccataacttcat 167  Q
    |||||||||||||  |||  || |||||||||||||||||| | ||||||||    
T  2404 tactttgaacatgaaatttcaccaacaacaattcaattatcaacaacttcat 2353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 62; Significance: 1e-26; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 60 - 170
Target Start/End: Original strand, 20275 - 20386
Alignment:
Q  60 aacaacaaagcataattcaccaattgagcatattttcaacatataccaacttctcat--actttgaacatgtgattcaactaacaacaattcaattatcc 157  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| | | || ||||  |||||||||||   ||||||||||||||||||||||||| |    
T  20275 aacaacaaagcataattaaccaattgagcatattttcaacatatatcta-ttttcatacactttgaacatacaattcaactaacaacaattcaattattc 20373  T
Q  158 ataacttcataca 170  Q
    |||||||||||||    
T  20374 ataacttcataca 20386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 168 - 260
Target Start/End: Original strand, 20433 - 20524
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttacctta 260  Q
    |||||| ||||||||| |||||||||||||| |||||| |||||||||||||| ||| ||||||||||||||||  |||||||||||||||||    
T  20433 acaattaatcaattcatccaattaagcacttatcatacaaataattgaaaattacaa-aagtgattatgatgaacactaacccccttacctta 20524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 17 - 104
Target Start/End: Complemental strand, 704 - 618
Alignment:
Q  17 aacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaacatata 104  Q
    ||||||||| || ||||||||||||||||||||||||||||  ||||||| ||||||||||||||| |||||||||||||||||||||    
T  704 aacaacaac-atcaattgatcatgaaacttatcacaattcatcaacaacatagcataattcaccaaatgagcatattttcaacatata 618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 58; Significance: 3e-24; HSPs: 2)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 229 - 361
Target Start/End: Original strand, 8332 - 8465
Alignment:
Q  229 tgattatgatgaattctaacccccttaccttagatag-agtaatccctagcttaggcttcaattttgctcctagctctcatccaatccttgattcttcaa 327  Q
    ||||||||||||||||||||||||||||||||| | | ||| |  | || |  | |||||| ||| ||||||||||||| |||||||||||| | |||||    
T  8332 tgattatgatgaattctaacccccttaccttaggttgtagttaatcttaacccaagcttcactttagctcctagctctcttccaatccttgaatattcaa 8431  T
Q  328 gttcctcttctctctaacccttttctcctttgct 361  Q
    |||||||||||||||||||||||||  |||||||    
T  8432 gttcctcttctctctaacccttttcctctttgct 8465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 229 - 352
Target Start/End: Original strand, 11198 - 11322
Alignment:
Q  229 tgattatgatgaattctaacccccttaccttagatag--agtaatccctagcttaggcttcaattttgctcctagctctcatccaatccttgattcttca 326  Q
    |||||||||||| |||||||||||||||||||| | |  | |||||  || |  | |||||| ||| ||||||||||||| |||||||||||| ||||||    
T  11198 tgattatgatgacttctaacccccttaccttaggttgtaattaatct-taacccaagcttcactttagctcctagctctcttccaatccttgaatcttca 11296  T
Q  327 agttcctcttctctctaacccttttc 352  Q
    ||||||||||||||||||||||||||    
T  11297 agttcctcttctctctaacccttttc 11322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0876 (Bit Score: 57; Significance: 1e-23; HSPs: 2)
Name: scaffold0876
Description:

Target: scaffold0876; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 168 - 260
Target Start/End: Original strand, 34 - 125
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttacctta 260  Q
    |||||| ||||||||| |||||||||||||| |||||| |||||||||||||| ||| ||||||||||||||||  |||||||||||||||||    
T  34 acaattaatcaattcatccaattaagcacttatcatacaaataattgaaaattacaa-aagtgattatgatgaacactaacccccttacctta 125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0876; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 319 - 349
Target Start/End: Original strand, 186 - 216
Alignment:
Q  319 attcttcaagttcctcttctctctaaccctt 349  Q
    |||||||||||||||||||||||||||||||    
T  186 attcttcaagttcctcttctctctaaccctt 216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 57; Significance: 1e-23; HSPs: 4)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 168 - 260
Target Start/End: Complemental strand, 19941 - 19850
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttacctta 260  Q
    |||||| ||||||||| |||||||||||||| |||||| |||||||||||||| ||| ||||||||||||||||  |||||||||||||||||    
T  19941 acaattaatcaattcatccaattaagcacttatcatacaaataattgaaaattacaa-aagtgattatgatgaacactaacccccttacctta 19850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 168 - 260
Target Start/End: Complemental strand, 24245 - 24154
Alignment:
Q  168 acaatttatcaattcacccaattaagcacttttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttacctta 260  Q
    |||||| ||||||||| |||||||||||||| |||||| |||||||||||||| ||| ||||||||||||||||  |||||||||||||||||    
T  24245 acaattaatcaattcatccaattaagcacttatcatacaaataattgaaaattacaa-aagtgattatgatgaacactaacccccttacctta 24154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 117 - 170
Target Start/End: Complemental strand, 20041 - 19988
Alignment:
Q  117 actttgaacatgtgattcaactaacaacaattcaattatccataacttcataca 170  Q
    |||||||||||   ||||||||||||||||||||||||| ||||||||||||||    
T  20041 actttgaacatacaattcaactaacaacaattcaattattcataacttcataca 19988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 117 - 170
Target Start/End: Complemental strand, 24345 - 24292
Alignment:
Q  117 actttgaacatgtgattcaactaacaacaattcaattatccataacttcataca 170  Q
    |||||||||||   ||||||||||||||||||||||||| ||||||||||||||    
T  24345 actttgaacatacaattcaactaacaacaattcaattattcataacttcataca 24292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1295 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold1295
Description:

Target: scaffold1295; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 186 - 349
Target Start/End: Original strand, 384 - 548
Alignment:
Q  186 caattaagcactt-ttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttaccttagatag-agtaatccctagcttagg 283  Q
    ||||||||||||| ||||||| || || |||||| | || ||| ||||||  |||||||||||||||||||||| || ||  |  ||| ||||||| | |    
T  384 caattaagcacttattcatac-aacaaatgaaaactacactaaatgattacaatgaattctaacccccttacctcagttatcaccaattcctagctcaag 482  T
Q  284 cttcaattttgctcctagctctcatccaatccttgattcttcaagttcctcttctctctaaccctt 349  Q
    ||||| ||| ||||||||| ||| |||||||||||| |||||||| ||||||||||||||||||||    
T  483 cttcactttagctcctagccctcttccaatccttgaatcttcaagctcctcttctctctaaccctt 548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091 (Bit Score: 49; Significance: 6e-19; HSPs: 2)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 30 - 98
Target Start/End: Original strand, 32276 - 32344
Alignment:
Q  30 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaa 98  Q
    ||||||||||||||| ||||||||||||  ||||||||  |||||||||||||||||||||||||||||    
T  32276 aattgatcatgaaacatatcacaattcatcaacaacaattcataattcaccaattgagcatattttcaa 32344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 30 - 98
Target Start/End: Complemental strand, 42027 - 41959
Alignment:
Q  30 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcatattttcaa 98  Q
    ||||||||||||||| ||||||||||||  ||||||||  |||||||||||||||||||||||||||||    
T  42027 aattgatcatgaaacatatcacaattcatcaacaacaattcataattcaccaattgagcatattttcaa 41959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 49; Significance: 6e-19; HSPs: 3)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 89655 - 89584
Alignment:
Q  17 aacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagca 89  Q
    ||||||||| || ||||| |||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  89655 aacaacaac-atcaattgttcatgaaacttatcacaatttaacaacaacaaagcataattcaccaattgagca 89584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 331
Target Start/End: Complemental strand, 89409 - 89306
Alignment:
Q  229 tgattatgatgaattctaacccccttaccttagat--agagtaatccctagcttaggcttcaattttgctcct-agctctcatccaatccttgattcttc 325  Q
    |||| ||||||||  ||||||||||||||||||||  ||| ||||||| | |||||||||||||||  ||||| ||||| | |||||| |||||||||||    
T  89409 tgatcatgatgaagactaacccccttaccttagataaagattaatccc-aacttaggcttcaatttaactcctaagctcac-tccaattcttgattcttc 89312  T
Q  326 aagttc 331  Q
    ||||||    
T  89311 aagttc 89306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 331
Target Start/End: Complemental strand, 107739 - 107636
Alignment:
Q  229 tgattatgatgaattctaacccccttaccttagat--agagtaatccctagcttaggcttcaattttgctcct-agctctcatccaatccttgattcttc 325  Q
    |||| ||||||||  ||||||||||||||||||||  ||| ||||||| | |||||||||||||||  ||||| ||||| | |||||| |||||||||||    
T  107739 tgatcatgatgaagactaacccccttaccttagataaagattaatccc-aacttaggcttcaatttaactcctaagctcac-tccaattcttgattcttc 107642  T
Q  326 aagttc 331  Q
    ||||||    
T  107641 aagttc 107636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 271 - 349
Target Start/End: Original strand, 6033 - 6111
Alignment:
Q  271 tccctagcttaggcttcaattttgctcctagctctcatccaatccttgattcttcaagttcctcttctctctaaccctt 349  Q
    ||||||||| | |||||| ||| ||||||||||||| |||||||||||| |||||||| |||| |||||||||||||||    
T  6033 tccctagctcaagcttcactttagctcctagctctcttccaatccttgaatcttcaagctccttttctctctaaccctt 6111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 47; Significance: 9e-18; HSPs: 2)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 30 - 167
Target Start/End: Complemental strand, 7199 - 7062
Alignment:
Q  30 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaatt-gagcatattttcaacatataccaacttctcatactttgaacatg 128  Q
    |||||| |||||  ||||||||||| ||||||||||| | ||||||| | ||||| ||||||| || ||||||||| ||  ||||||||||||||||||     
T  7199 aattgaacatgattcttatcacaatccaataacaacataacataattaaacaatttgagcataatt-caacatatatcactttctcatactttgaacatt 7101  T
Q  129 tgattcaactaacaacaattcaattatccataacttcat 167  Q
      |||  ||||||||||||||||||||| | ||||||||    
T  7100 aaatttcactaacaacaattcaattatcaacaacttcat 7062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 229 - 351
Target Start/End: Complemental strand, 26371 - 26251
Alignment:
Q  229 tgattatgatgaattctaacccccttaccttagat--agagtaatccctagcttaggcttcaattttgctcct-agctctcatccaatccttgattcttc 325  Q
    |||||||||| ||  ||||||||||||||||||||  ||| ||||||| | ||||||||||||||| |||||| ||||| | |||||||||| |||||||    
T  26371 tgattatgataaagactaacccccttaccttagatgaagattaatccc-atcttaggcttcaatttagctcctaagctcac-tccaatccttaattcttc 26274  T
Q  326 aagttcctcttctctctaaccctttt 351  Q
    ||||   |||||||||||||||||||    
T  26273 aagt---tcttctctctaaccctttt 26251  T

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Target: scaffold0013 (Bit Score: 47; Significance: 9e-18; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 30 - 167
Target Start/End: Original strand, 35551 - 35688
Alignment:
Q  30 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaatt-gagcatattttcaacatataccaacttctcatactttgaacatg 128  Q
    |||||| |||||  |||| |||| ||||| ||||||| ||||||| ||| ||||| ||| ||| || ||||||||| ||  |||||||||||||||||||    
T  35551 aattgaacatgactcttaccacatttcaacaacaacatagcataaatcaacaatttgagtataatt-caacatatatcactttctcatactttgaacatg 35649  T
Q  129 tgattcaactaacaacaattcaattatccataacttcat 167  Q
      |||  ||||||||||||||||||||| ||||||||||    
T  35650 aaatttcactaacaacaattcaattatcaataacttcat 35688  T

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Target: scaffold0013; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 229 - 351
Target Start/End: Original strand, 35800 - 35925
Alignment:
Q  229 tgattatgat-gaattctaacccccttaccttagatag-agtaatccctagcttaggcttcaattttgctcctagc-tctcatccaatccttgattcttc 325  Q
    |||||||||| ||||||||||||||||||||||  ||  |  ||| ||||||  | |||||| ||| ||||||||  |||| |||||| ||||| |||||    
T  35800 tgattatgattgaattctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctcctaggatctcttccaattcttgaatcttc 35899  T
Q  326 aagttcctcttctctctaaccctttt 351  Q
    ||| || |||||||||||||||||||    
T  35900 aagctcttcttctctctaaccctttt 35925  T

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Target: scaffold0053 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 16 - 156
Target Start/End: Complemental strand, 77034 - 76895
Alignment:
Q  16 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaatt-gagcatattttcaacatataccaacttctc 114  Q
    |||||||||| || |||||| |||||| || | |||||||||| ||||||| ||||||||||| ||||| || |||| || ||||||||| ||  |||||    
T  77034 caacaacaac-atcaattgaacatgaatctcaccacaattcaacaacaacatagcataattcaacaatttgaacataatt-caacatatatcactttctc 76937  T
Q  115 atactttgaacatgtgattcaactaacaacaattcaattatc 156  Q
    ||||||||||||||  |||  || ||||||||||||||||||    
T  76936 atactttgaacatgaaatttcaccaacaacaattcaattatc 76895  T

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Target: scaffold0234 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 17585 - 17525
Alignment:
Q  31 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 91  Q
    |||||||||||||||||||||||||||  |||||| | |||||||||||||||||||||||    
T  17585 attgatcatgaaacttatcacaattcatcaacaaccatgcataattcaccaattgagcata 17525  T

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Target: scaffold0234; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 349
Target Start/End: Complemental strand, 17335 - 17217
Alignment:
Q  229 tgattatgatgaattctaacccccttaccttagatagag--taatccctagcttaggcttcaattttgctcctagctctca-tccaatccttgattcttc 325  Q
    |||||||||| ||  ||||||| |||||||||||| |||  ||||||| | ||||||||||||||| |||||||  | ||| |||||||||| |||||||    
T  17335 tgattatgataaagactaacccgcttaccttagatggagattaatcccaa-cttaggcttcaatttagctcctaagt-tcactccaatccttaattcttc 17238  T
Q  326 aagttcctcttctctctaaccctt 349  Q
    ||||   |||||||||||||||||    
T  17237 aagt---tcttctctctaaccctt 17217  T

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Target: scaffold0183 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0183
Description:

Target: scaffold0183; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 229 - 331
Target Start/End: Complemental strand, 5603 - 5498
Alignment:
Q  229 tgattatgatgaattctaacccccttaccttagatagagtaatccct--agcttaggcttcaattttgctcctagctc-tcatccaatccttgattcttc 325  Q
    ||||||| ||||||| ||||||||||| ||||| |||  || |||||  ||||||||||||||||||||||||| ||| ||  |||| ||||||||||||    
T  5603 tgattatcatgaattataacccccttatcttagttaggttactccctctagcttaggcttcaattttgctcctaactcttctcccaacccttgattcttc 5504  T
Q  326 aagttc 331  Q
    ||||||    
T  5503 aagttc 5498  T

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Target: scaffold0706 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 6724 - 6664
Alignment:
Q  31 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 91  Q
    ||||||||| |||||||||||||||||  |||||| | |||||||||||||||||||||||    
T  6724 attgatcatcaaacttatcacaattcatcaacaaccatgcataattcaccaattgagcata 6664  T

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Target: scaffold0706; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 229 - 345
Target Start/End: Complemental strand, 6474 - 6355
Alignment:
Q  229 tgattatgatgaattctaacccccttaccttagata--gagtaatccctagcttaggcttcaattttgctcct-agctctcatccaatccttgattcttc 325  Q
    |||||||||| ||  |||||||||||||||||||||  || ||||||| | ||||||||||||||| |||||| ||||| | |||||| |||||||||||    
T  6474 tgattatgataaagactaacccccttaccttagataaggaataatccc-aacttaggcttcaatttagctcctaagctcac-tccaat-cttgattcttc 6378  T
Q  326 aag---ttcctcttctctctaac 345  Q
    |||   | |||||||||||||||    
T  6377 aagctctccctcttctctctaac 6355  T

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Target: scaffold0686 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0686
Description:

Target: scaffold0686; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 6264 - 6204
Alignment:
Q  31 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 91  Q
    |||||||||||||| ||||||||||||  |||||| | |||||||||||||||||||||||    
T  6264 attgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 6204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 319 - 349
Target Start/End: Complemental strand, 5716 - 5686
Alignment:
Q  319 attcttcaagttcctcttctctctaaccctt 349  Q
    |||||||||||||||||||||||||||||||    
T  5716 attcttcaagttcctcttctctctaaccctt 5686  T

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Target: scaffold0597 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0597
Description:

Target: scaffold0597; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 1159 - 1099
Alignment:
Q  31 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 91  Q
    |||||||||||||| ||||||||||||  |||||| | |||||||||||||||||||||||    
T  1159 attgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 1099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0597; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 229 - 349
Target Start/End: Complemental strand, 909 - 791
Alignment:
Q  229 tgattatgatgaattctaacccccttaccttagat--agagtaatccctagcttaggcttcaattttgctcctagctctca-tccaatccttgattcttc 325  Q
    |||||||||| ||  ||||||||||||||||||||  ||| ||||||| | ||||||||||||||| |||||||  | ||| |||||||||| |||||||    
T  909 tgattatgataaagactaacccccttaccttagatgaagattaatcccaa-cttaggcttcaatttagctcctaagt-tcactccaatccttaattcttc 812  T
Q  326 aagttcctcttctctctaaccctt 349  Q
    ||||   |||||||||||||||||    
T  811 aagt---tcttctctctaaccctt 791  T

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Target: scaffold0251 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 13567 - 13507
Alignment:
Q  31 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 91  Q
    |||||||||||||| ||||||||||||  |||||| | |||||||||||||||||||||||    
T  13567 attgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 13507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 21541 - 21481
Alignment:
Q  31 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 91  Q
    |||||||||||||| ||||||||||||  |||||| | |||||||||||||||||||||||    
T  21541 attgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 21481  T

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Target: scaffold0184 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 31461 - 31401
Alignment:
Q  31 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 91  Q
    |||||||||||||| ||||||||||||  |||||| | |||||||||||||||||||||||    
T  31461 attgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 31401  T

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Target: scaffold0175 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 15023 - 15083
Alignment:
Q  31 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 91  Q
    |||||||||||||| ||||||||||||  |||||| | |||||||||||||||||||||||    
T  15023 attgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 15083  T

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Target: scaffold0078 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 41383 - 41443
Alignment:
Q  31 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 91  Q
    |||||||||||||| ||||||||||||  |||||| | |||||||||||||||||||||||    
T  41383 attgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 41443  T

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Target: scaffold0483 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 167
Target Start/End: Original strand, 6734 - 6871
Alignment:
Q  30 aattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaatt-gagcatattttcaacatataccaacttctcatactttgaacatg 128  Q
    |||||| |||||  |||| |||||||||| || | || ||||||||||| ||||| ||||| | || ||||||||| ||  |||||||||||||||||||    
T  6734 aattgaacatgactcttaccacaattcaacaatagcatagcataattcaacaatttgagcaaaatt-caacatatatcactttctcatactttgaacatg 6832  T
Q  129 tgattcaactaacaacaattcaattatccataacttcat 167  Q
      |||  || |||||||||||||||||| | ||||||||    
T  6833 aaatttcaccaacaacaattcaattatcaacaacttcat 6871  T

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Target: scaffold0465 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0465
Description:

Target: scaffold0465; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 229 - 349
Target Start/End: Complemental strand, 9913 - 9795
Alignment:
Q  229 tgattatgatgaattctaacccccttaccttagat--agagtaatccctagcttaggcttcaattttgctcctagctctca-tccaatccttgattcttc 325  Q
    |||||||||| ||  ||||||||||||||||||||  ||| ||||||| | ||||||||||||||| |||||||  | ||| |||||||||| |||||||    
T  9913 tgattatgataaagactaacccccttaccttagatgaagattaatcccaa-cttaggcttcaatttagctcctaagt-tcactccaatccttaattcttc 9816  T
Q  326 aagttcctcttctctctaaccctt 349  Q
    ||||   |||||||||||||||||    
T  9815 aagt---tcttctctctaaccctt 9795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0465; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 84
Target Start/End: Complemental strand, 10147 - 10094
Alignment:
Q  31 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaatt 84  Q
    |||||||||||||||||||||||||||  |||||| ||||||||||| ||||||    
T  10147 attgatcatgaaacttatcacaattcatcaacaaccaagcataattcgccaatt 10094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 229 - 349
Target Start/End: Original strand, 28859 - 28980
Alignment:
Q  229 tgattatgatgaattctaacccccttaccttagatagagtaa-tccctagcttaggcttcaattttgctcctagct-ctcatccaatccttgattcttca 326  Q
    ||||||||||||||||||||||| ||||||||| ||||  || ||||||||  | |||||| ||| | |||||| | ||| |||  | ||||| ||||||    
T  28859 tgattatgatgaattctaaccccgttaccttagttagatcaaatccctagcccaagcttcactttagttcctaggttctc-tcctcttcttgaatcttca 28957  T
Q  327 agttcctcttctctctaaccctt 349  Q
    |||||||||||||||||||||||    
T  28958 agttcctcttctctctaaccctt 28980  T

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Target: scaffold0150; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 50 - 156
Target Start/End: Original strand, 28629 - 28735
Alignment:
Q  50 acaattcaataacaacaaagcataattcaccaatt-gagcatattttcaacatataccaacttctcatactttgaacatgtgattcaactaacaacaatt 148  Q
    ||||||||| ||||||| | ||||||||| ||||| ||||||| || ||||||||| ||  |||||||||||||||||| | |||  || ||||||||||    
T  28629 acaattcaacaacaacataccataattcaacaatttgagcataatt-caacatatatcactttctcatactttgaacatataatttcaccaacaacaatt 28727  T
Q  149 caattatc 156  Q
    || |||||    
T  28728 cagttatc 28735  T

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Target: scaffold0700 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0700
Description:

Target: scaffold0700; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 156
Target Start/End: Original strand, 2585 - 2724
Alignment:
Q  16 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaatt-gagcatattttcaacatataccaacttctc 114  Q
    |||||||||| || |||||| |||||| || |||| ||||||| ||||||| ||||||||||| || || |||||||  ||||||||||| ||  |||      
T  2585 caacaacaac-atcaattgaacatgaatctcatcataattcaacaacaacatagcataattcaacatttagagcata-attcaacatataacactttcat 2682  T
Q  115 atactttgaacatgtgattcaactaacaacaattcaattatc 156  Q
    ||||||||||||||  |||  || ||||||||||||||||||    
T  2683 atactttgaacatgcaatttcaccaacaacaattcaattatc 2724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 229 - 349
Target Start/End: Original strand, 12419 - 12543
Alignment:
Q  229 tgattatgatgaattctaacccccttaccttagatagag--taatccctagcttaggcttcaattttgctcct-agctctcatccaatccttgattcttc 325  Q
    |||||||||| ||  ||||||||||||||||||||||||  |||| |||| ||||||||||| ||| |||||| ||||| | ||||||  ||||||||||    
T  12419 tgattatgataaagactaacccccttaccttagatagagattaat-cctaacttaggcttcactttagctcctaagctcac-tccaatttttgattcttc 12516  T
Q  326 aag---ttcctcttctctctaaccctt 349  Q
    |||   | |||||||||||||||||||    
T  12517 aagctctccctcttctctctaaccctt 12543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0808 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0808
Description:

Target: scaffold0808; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 271 - 327
Target Start/End: Complemental strand, 2004 - 1948
Alignment:
Q  271 tccctagcttaggcttcaattttgctcctagctctcatccaatccttgattcttcaa 327  Q
    ||||||||| | |||||||||| ||||||||||||| |||||||||||| |||||||    
T  2004 tccctagctcaagcttcaatttagctcctagctctcttccaatccttgaatcttcaa 1948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0574 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0574
Description:

Target: scaffold0574; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 9688 - 9628
Alignment:
Q  31 attgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 91  Q
    |||||||||||||||||||||||||||  |||||| | |||||| |||| |||||||||||    
T  9688 attgatcatgaaacttatcacaattcatcaacaaccatgcataagtcactaattgagcata 9628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 186 - 258
Target Start/End: Complemental strand, 1478 - 1406
Alignment:
Q  186 caattaagcactt-ttcataccaataattgaaaattgcaataagtgattatgatgaattctaacccccttacct 258  Q
    ||||||||||||| ||||||| || || |||||| | || ||| ||||||||||||||||||||||||||||||    
T  1478 caattaagcacttattcatac-aacaaatgaaaactacactaaatgattatgatgaattctaacccccttacct 1406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 91
Target Start/End: Complemental strand, 12697 - 12641
Alignment:
Q  35 atcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 91  Q
    |||||||||| ||||||||||||  |||||  | |||||||||||||||||||||||    
T  12697 atcatgaaacatatcacaattcatcaacaatcatgcataattcaccaattgagcata 12641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 349
Target Start/End: Complemental strand, 12449 - 12326
Alignment:
Q  229 tgattatgatgaattctaacccccttaccttagatagag--taatccctagcttaggcttcaattttgctccta-gctctcatccaatccttgattcttc 325  Q
    |||||||||| ||  ||||||||||||||||||||| ||  | ||||| | ||||| ||||||||| ||||||| ||||  |||||||| ||||||||||    
T  12449 tgattatgataaaaactaacccccttaccttagataaagattcatcccaa-cttagacttcaatttagctcctaagctca-atccaatc-ttgattcttc 12353  T
Q  326 aagttc---ctcttctctctaaccctt 349  Q
    ||| ||   ||||||||||||||||||    
T  12352 aagctctccctcttctctctaaccctt 12326  T

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Target: scaffold0018 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 278 - 349
Target Start/End: Complemental strand, 51089 - 51018
Alignment:
Q  278 cttaggcttcaattttgctccta-gctctcatccaatccttgattcttcaagttcctcttctctctaaccctt 349  Q
    ||||||||||||||| ||||||| |||| | ||||||||||  ||||||||||||  ||||||||||||||||    
T  51089 cttaggcttcaatttagctcctaagctcac-tccaatccttagttcttcaagttctccttctctctaaccctt 51018  T

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Target: scaffold0009 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 155
Target Start/End: Original strand, 69517 - 69655
Alignment:
Q  16 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaatt-gagcatattttcaacatataccaacttctc 114  Q
    |||||||||| || |||||| |||||| || |||||||||||| ||||||| |||| |||||| || || |||||||  ||||||||||| ||  ||| |    
T  69517 caacaacaac-atcaattgaacatgaatctcatcacaattcaacaacaacatagcacaattcaacatttagagcata-attcaacatataacactttcac 69614  T
Q  115 atactttgaacatgtgattcaactaacaacaattcaattat 155  Q
    ||||||| ||||||  |||  ||  ||||||||||||||||    
T  69615 atactttaaacatgcaatttcacctacaacaattcaattat 69655  T

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Target: scaffold0009; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 349
Target Start/End: Original strand, 272331 - 272454
Alignment:
Q  229 tgattatgatgaattctaacccccttaccttagat--agagtaatccctagcttaggcttcaattttgctcct-agctctcatccaatccttgattcttc 325  Q
    |||||||||| ||  ||||||||||||||||||||  ||| ||||||| | ||||||||||| ||| |||||| ||||| | |||||| ||||||||||     
T  272331 tgattatgataaagactaacccccttaccttagataaagattaatccc-aacttaggcttcactttagctcctgagctcac-tccaat-cttgattcttt 272427  T
Q  326 aag---ttcctcttctctctaaccctt 349  Q
    |||   | |||||||||||||||||||    
T  272428 aagctctccctcttctctctaaccctt 272454  T

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Target: scaffold0006 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 170
Target Start/End: Complemental strand, 197440 - 197287
Alignment:
Q  16 caacaacaaccatgaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaatt-gagcatattttcaacatataccaacttctc 114  Q
    |||||||||| || |||||| |||||| || |||||||||||| ||||||| || | |||||| || || ||||||| || |||| |||| ||  ||| |    
T  197440 caacaacaac-atcaattgaacatgaatctcatcacaattcaacaacaacataggacaattcaacatttagagcataatt-caacttataacactttcac 197343  T
Q  115 atactttgaacatgtgattcaactaacaacaattcaattatccataacttcataca 170  Q
    ||||||||||| ||  |||  || |||||||||||||||||| | || ||||||||    
T  197342 atactttgaacttgcaatttcaccaacaacaattcaattatcaacaatttcataca 197287  T

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Target: scaffold0833 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0833
Description:

Target: scaffold0833; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 57
Target Start/End: Original strand, 3358 - 3399
Alignment:
Q  15 tcaacaacaaccatgaattgatcatgaaacttatcacaattca 57  Q
    ||||||||||| || ||||||||||||||||||||||||||||    
T  3358 tcaacaacaac-atcaattgatcatgaaacttatcacaattca 3399  T

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Target: scaffold0266 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 349
Target Start/End: Complemental strand, 3524 - 3416
Alignment:
Q  244 ctaacccccttaccttagat--agagtaatccctagcttaggcttcaattttgctcct-agctctcatccaatccttgattcttcaag---ttcctcttc 337  Q
    ||||||||||||||||||||  ||| ||||||| | ||||||||||| ||| |||||| ||||| | |||||| ||||||||||||||   | |||||||    
T  3524 ctaacccccttaccttagataaagattaatccc-aacttaggcttcactttagctcctaagctcac-tccaat-cttgattcttcaagctctccctcttc 3428  T
Q  338 tctctaaccctt 349  Q
    ||||||||||||    
T  3427 tctctaaccctt 3416  T

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Target: scaffold0266; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 349
Target Start/End: Original strand, 1431 - 1554
Alignment:
Q  229 tgattatgatgaattctaacccccttaccttagatagag--taatccctagcttaggcttcaattttgctccta-gctctcatccaatccttgattcttc 325  Q
    |||||||||| ||  ||||||||||||||||||||| ||  ||||| | | ||||||||||| ||| ||||||| |||| | ||||||| ||||||||||    
T  1431 tgattatgataaagactaacccccttaccttagataaagattaatcacaa-cttaggcttcactttagctcctaagctcac-tccaatc-ttgattcttc 1527  T
Q  326 aagttc---ctcttctctctaaccctt 349  Q
    ||| ||   ||||||||||||||||||    
T  1528 aagctctccctcttctctctaaccctt 1554  T

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Target: scaffold0132 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 319 - 349
Target Start/End: Original strand, 42767 - 42797
Alignment:
Q  319 attcttcaagttcctcttctctctaaccctt 349  Q
    |||||||||||||||||||||||||||||||    
T  42767 attcttcaagttcctcttctctctaaccctt 42797  T

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Target: scaffold0116 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 319 - 349
Target Start/End: Original strand, 30510 - 30540
Alignment:
Q  319 attcttcaagttcctcttctctctaaccctt 349  Q
    |||||||||||||||||||||||||||||||    
T  30510 attcttcaagttcctcttctctctaaccctt 30540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 186706 - 186647
Alignment:
Q  31 attgatcatgaaacttatcacaattcaat-aacaacaaagcataattcaccaattgagcata 91  Q
    |||||||||||||| |||||||||  ||| |||||| | |||||||||||||||||||||||    
T  186706 attgatcatgaaacatatcacaat--aatcaacaaccatgcataattcaccaattgagcata 186647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 193668 - 193609
Alignment:
Q  31 attgatcatgaaacttatcacaattcaat-aacaacaaagcataattcaccaattgagcata 91  Q
    |||||||||||||| |||||||||  ||| |||||| | |||||||||||||||||||||||    
T  193668 attgatcatgaaacatatcacaat--aatcaacaaccatgcataattcaccaattgagcata 193609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0498 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0498
Description:

Target: scaffold0498; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 349
Target Start/End: Original strand, 9184 - 9307
Alignment:
Q  229 tgattatgatgaattctaacccccttaccttagat--agagtaatccctagcttaggcttcaattttgctcct-agctctcatccaatccttgattcttc 325  Q
    |||||||||| ||  ||||||||||||||||||||  ||| ||||||| | ||||||||||| ||| |||||| ||||| | |||||| |||||||||||    
T  9184 tgattatgataaagactaacccccttaccttagataaagattaatccc-aacttaggcttcactttagctcctaagctcac-tccaat-cttgattcttc 9280  T
Q  326 aag---ttcctcttctctctaaccctt 349  Q
    |||   | ||| |||||||||||||||    
T  9281 aagctctccctattctctctaaccctt 9307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 260
Target Start/End: Original strand, 31297 - 31373
Alignment:
Q  186 caattaagcacttt-tcataccaataattgaaaa-ttgcaataagtgattatgat-gaattctaacccccttacctta 260  Q
    |||||||||||||  |||||| |||||||||||| || || ||| |||||||||| ||||||||||||||||||||||    
T  31297 caattaagcacttaatcatac-aataattgaaaaattacactaaatgattatgattgaattctaacccccttacctta 31373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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