View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20706_low_42 (Length: 321)

Name: NF20706_low_42
Description: NF20706
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20706_low_42
NF20706_low_42
[»] chr6 (6 HSPs)
chr6 (17-193)||(7559727-7559903)
chr6 (227-320)||(7559599-7559692)
chr6 (26-70)||(13017189-13017233)
chr6 (26-70)||(13947328-13947372)
chr6 (26-70)||(19476317-19476361)
chr6 (26-70)||(28230910-28230954)
[»] chr5 (7 HSPs)
chr5 (26-72)||(22159948-22159994)
chr5 (26-68)||(15542384-15542426)
chr5 (26-70)||(15532200-15532244)
chr5 (26-70)||(26711464-26711508)
chr5 (26-70)||(26981201-26981245)
chr5 (26-67)||(33575290-33575331)
chr5 (26-71)||(35049748-35049793)
[»] chr4 (5 HSPs)
chr4 (26-70)||(12172174-12172218)
chr4 (26-70)||(2542084-2542128)
chr4 (26-70)||(24150984-24151028)
chr4 (26-70)||(29544637-29544681)
chr4 (26-70)||(38283247-38283291)
[»] chr3 (7 HSPs)
chr3 (26-70)||(11138570-11138614)
chr3 (26-70)||(22626312-22626356)
chr3 (26-70)||(39563510-39563554)
chr3 (26-71)||(48063790-48063835)
chr3 (26-70)||(3306169-3306213)
chr3 (26-70)||(25442613-25442657)
chr3 (26-70)||(34983541-34983585)
[»] chr2 (6 HSPs)
chr2 (26-70)||(31528591-31528635)
chr2 (26-70)||(13710271-13710315)
chr2 (26-64)||(40018180-40018218)
chr2 (26-70)||(16790524-16790568)
chr2 (26-70)||(24384925-24384968)
chr2 (26-70)||(40258905-40258949)
[»] chr8 (5 HSPs)
chr8 (26-70)||(12575300-12575344)
chr8 (26-71)||(10498015-10498060)
chr8 (26-70)||(23612449-23612493)
chr8 (26-70)||(23619131-23619175)
chr8 (26-70)||(31284984-31285028)
[»] chr7 (7 HSPs)
chr7 (26-70)||(23759609-23759653)
chr7 (26-70)||(295062-295106)
chr7 (26-64)||(11279692-11279730)
chr7 (26-71)||(3861906-3861951)
chr7 (26-70)||(16166046-16166090)
chr7 (44-72)||(17857878-17857906)
chr7 (26-70)||(37165917-37165961)
[»] scaffold0440 (1 HSPs)
scaffold0440 (26-70)||(10065-10109)
[»] chr1 (1 HSPs)
chr1 (29-69)||(1936833-1936873)
[»] scaffold0191 (1 HSPs)
scaffold0191 (26-70)||(4229-4273)
[»] scaffold0048 (1 HSPs)
scaffold0048 (26-70)||(15724-15768)
[»] scaffold0038 (1 HSPs)
scaffold0038 (26-70)||(31407-31451)


Alignment Details
Target: chr6 (Bit Score: 141; Significance: 6e-74; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 17 - 193
Target Start/End: Complemental strand, 7559903 - 7559727
Alignment:
Q  17 gaacttatctttattacttcgatcgaatttggtacacttgccaaatatctatcatggatcaactacaacgttgatccaccttgaacatttaagattaaat 116  Q
    |||||||||||||||||||||||| ||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  7559903 gaacttatctttattacttcgatcaaatttagtacacttgtcaaatatttatcatggatcaactacaacgttgatccaccttggacatttaaggttaaat 7559804  T
Q  117 attaaaggaaaagactaatttgactaacggatatatagttaagtgacttagaccgaacgaaatctacttaagtgacc 193  Q
    ||||||||||||||||||||||||||||||| |||||||||| ||||||||| ||||||||||||||||||||||||    
T  7559803 attaaaggaaaagactaatttgactaacggaaatatagttaattgacttagatcgaacgaaatctacttaagtgacc 7559727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 227 - 320
Target Start/End: Complemental strand, 7559692 - 7559599
Alignment:
Q  227 gcaattgaaccttaaatttattaatgtatacttaaaattgcattaaaaataactttaattaattagagcatctccaataggtctgttattgatg 320  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  7559692 gcaattgaaccttaaatttattaatgtatacttaaaattgcattaaaaacaactttaattaattagagcatctccaataggtctgttatagatg 7559599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 70
Target Start/End: Complemental strand, 13017233 - 13017189
Alignment:
Q  26 tttattacttcgatcgaatttggtacacttgccaaatatctatca 70  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  13017233 tttattacttcgatcgaatttggttcacttgccaaatatctatca 13017189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 70
Target Start/End: Original strand, 13947328 - 13947372
Alignment:
Q  26 tttattacttcgatcgaatttggtacacttgccaaatatctatca 70  Q
    |||| ||||||||| | ||||||||||||||||||| ||||||||    
T  13947328 tttactacttcgatagtatttggtacacttgccaaaaatctatca 13947372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 70
Target Start/End: Original strand, 19476317 - 19476361
Alignment:
Q  26 tttattacttcgatcgaatttggtacacttgccaaatatctatca 70  Q
    |||| ||||||||| | ||||||||||||||||||| ||||||||    
T  19476317 tttactacttcgatagtatttggtacacttgccaaaaatctatca 19476361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 70
Target Start/End: Original strand, 28230910 - 28230954
Alignment:
Q  26 tttattacttcgatcgaatttggtacacttgccaaatatctatca 70  Q
    |||| ||||||||| | ||||||||||||||||||| ||||||||    
T  28230910 tttactacttcgatagtatttggtacacttgccaaaaatctatca 28230954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 72
Target Start/End: Original strand, 22159948 - 22159994
Alignment:
Q  26 tttattacttcgatcgaatttggtacacttgccaaatatctatcatg 72  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||    
T  22159948 tttattacttcgatcgaatttggtacacttgtcaaatatctatcatg 22159994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 26 - 68
Target Start/End: Complemental strand, 15542426 - 15542384
Alignment:
Q  26 tttattacttcgatcgaatttggtacacttgccaaatatctat 68  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  15542426 tttattacttcgatcgaatttggttcacttgccaaatatctat 15542384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 26 - 70
Target Start/End: Complemental strand, 15532244 - 15532200
Alignment:
Q  26 tttattacttcgatcgaatttggtacacttgccaaatatctatca 70  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||    
T  15532244 tttattacttcgatcgaatttggttcacatgccaaatatctatca 15532200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 70
Target Start/End: Complemental strand, 26711508 - 26711464
Alignment:
Q  26 tttattacttcgatcgaatttggtacacttgccaaatatctatca 70  Q
    ||||||||||| || ||||||||| ||||||||||||||||||||    
T  26711508 tttattacttcaattgaatttggttcacttgccaaatatctatca 26711464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 70
Target Start/End: Complemental strand, 26981245 - 26981201
Alignment:
Q  26 tttattacttcgatcgaatttggtacacttgccaaatatctatca 70  Q
    ||||||||||| || ||||||||| ||||||||||||||||||||    
T  26981245 tttattacttcaattgaatttggttcacttgccaaatatctatca 26981201  T

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Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 67
Target Start/End: Original strand, 33575290 - 33575331
Alignment:
Q  26 tttattacttcgatcgaatttggtacacttgccaaatatcta 67  Q
    |||||||||||||| ||||||||| |||||||||||| ||||    
T  33575290 tttattacttcgattgaatttggttcacttgccaaatttcta 33575331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 71
Target Start/End: Complemental strand, 35049793 - 35049748
Alignment:
Q  26 tttattacttcgatcgaatttggtacacttgccaaatatctatcat 71  Q
    |||| ||||||||| | ||||||||||||||||||| |||||||||    
T  35049793 tttactacttcgatagtatttggtacacttgccaaacatctatcat 35049748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 70
Target Start/End: Original strand, 12172174 - 12172218
Alignment:
Q  26 tttattacttcgatcgaatttggtacacttgccaaatatctatca 70  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  12172174 tttattacttcgatcgaatttggttcacttgccaaatatctatca 12172218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 26 - 70
Target Start/End: Original strand, 2542084 - 2542128
Alignment:
Q  26 tttattacttcgatcgaatttggtacacttgccaaatatctatca 70  Q
    |||||||||||||| || |||||||||||||||||||||||||||    
T  2542084 tttattacttcgattgactttggtacacttgccaaatatctatca 2542128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 70
Target Start/End: Original strand, 24150984 - 24151028
Alignment:
Q  26 tttattacttcgatcgaatttggtacacttgccaaatatctatca 70  Q
    |||| ||||||||| | ||||||||||||||||||| ||||||||    
T  24150984 tttactacttcgatagtatttggtacacttgccaaaaatctatca 24151028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 70
Target Start/End: Complemental strand, 29544681 - 29544637
Alignment:
Q  26 tttattacttcgatcgaatttggtacacttgccaaatatctatca 70  Q
    |||||||||||||| | |||||||||||||||||||  |||||||    
T  29544681 tttattacttcgatagtatttggtacacttgccaaacgtctatca 29544637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 70
Target Start/End: Complemental strand, 38283291 - 38283247
Alignment:
Q  26 tttattacttcgatcgaatttggtacacttgccaaatatctatca 70  Q
    |||| ||||||||| | ||||||||||||||||||| ||||||||    
T  38283291 tttactacttcgatagtatttggtacacttgccaaaaatctatca 38283247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 7)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 70
Target Start/End: Complemental strand, 11138614 - 11138570
Alignment:
Q  26 tttattacttcgatcgaatttggtacacttgccaaatatctatca 70  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  11138614 tttattacttcgatcgaatttggttcacttgccaaatatctatca 11138570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 70
Target Start/End: Complemental strand, 22626356 - 22626312
Alignment:
Q  26 tttattacttcgatcgaatttggtacacttgccaaatatctatca 70  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  22626356 tttattacttcgatcgaatttggttcacttgccaaatatctatca 22626312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 70
Target Start/End: Complemental strand, 39563554 - 39563510
Alignment:
Q  26 tttattacttcgatcgaatttggtacacttgccaaatatctatca 70  Q
    |||||||||| ||| ||||||||| ||||||||||||||||||||    
T  39563554 tttattactttgattgaatttggttcacttgccaaatatctatca 39563510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 71
Target Start/End: Complemental strand, 48063835 - 48063790
Alignment:
Q  26 tttattacttcgatcgaatttggtacacttgccaaatatctatcat 71  Q
    |||| ||||||||| | ||||||||||||||||||| |||||||||    
T  48063835 tttactacttcgatagtatttggtacacttgccaaaaatctatcat 48063790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 70
Target Start/End: Original strand, 3306169 - 3306213
Alignment:
Q  26 tttattacttcgatcgaatttggtacacttgccaaatatctatca 70  Q
    |||||||||||||| |   ||||||||||||||||||||||||||    
T  3306169 tttattacttcgatagttattggtacacttgccaaatatctatca 3306213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 70
Target Start/End: Complemental strand, 25442657 - 25442613
Alignment:
Q  26 tttattacttcgatcgaatttggtacacttgccaaatatctatca 70  Q
    |||| ||||||||| | ||||||||||||||||||| ||||||||    
T  25442657 tttactacttcgatagtatttggtacacttgccaaaaatctatca 25442613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 70
Target Start/End: Complemental strand, 34983585 - 34983541
Alignment:
Q  26 tttattacttcgatcgaatttggtacacttgccaaatatctatca 70  Q
    |||| ||||||||| | ||||||||||||||||||| ||||||||    
T  34983585 tttactacttcgatagtatttggtacacttgccaaacatctatca 34983541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 6)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 70
Target Start/End: Original strand, 31528591 - 31528635
Alignment:
Q  26 tttattacttcgatcgaatttggtacacttgccaaatatctatca 70  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  31528591 tttattacttcgatcgaatttggttcacttgccaaatatctatca 31528635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 26 - 70
Target Start/End: Original strand, 13710271 - 13710315
Alignment:
Q  26 tttattacttcgatcgaatttggtacacttgccaaatatctatca 70  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||    
T  13710271 tttattacttcgattgaatttggttcacttgccaaatatctatca 13710315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 64
Target Start/End: Original strand, 40018180 - 40018218
Alignment:
Q  26 tttattacttcgatcgaatttggtacacttgccaaatat 64  Q
    |||||||||||||| ||||||||| ||||||||||||||    
T  40018180 tttattacttcgattgaatttggttcacttgccaaatat 40018218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 70
Target Start/End: Complemental strand, 16790568 - 16790524
Alignment:
Q  26 tttattacttcgatcgaatttggtacacttgccaaatatctatca 70  Q
    |||| ||||||||| | ||||||||||||||||||| ||||||||    
T  16790568 tttactacttcgatagtatttggtacacttgccaaaaatctatca 16790524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 70
Target Start/End: Complemental strand, 24384968 - 24384925
Alignment:
Q  26 tttattacttcgatcgaatttggtacacttgccaaatatctatca 70  Q
    |||||||||||||| |  |||||||||||||||||||||||||||    
T  24384968 tttattacttcgatagt-tttggtacacttgccaaatatctatca 24384925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 70
Target Start/End: Complemental strand, 40258949 - 40258905
Alignment:
Q  26 tttattacttcgatcgaatttggtacacttgccaaatatctatca 70  Q
    |||| ||||||||| | ||||||||||||||||||| ||||||||    
T  40258949 tttactacttcgatagtatttggtacacttgccaaaaatctatca 40258905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 37; Significance: 0.000000000007; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 26 - 70
Target Start/End: Complemental strand, 12575344 - 12575300
Alignment:
Q  26 tttattacttcgatcgaatttggtacacttgccaaatatctatca 70  Q
    |||||||||||||| |||||||||||||||||||||||| |||||    
T  12575344 tttattacttcgattgaatttggtacacttgccaaatatttatca 12575300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 71
Target Start/End: Complemental strand, 10498060 - 10498015
Alignment:
Q  26 tttattacttcgatcgaatttggtacacttgccaaatatctatcat 71  Q
    |||| ||||||||| | ||||||||||||||||||| |||||||||    
T  10498060 tttactacttcgatagtatttggtacacttgccaaaaatctatcat 10498015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 70
Target Start/End: Original strand, 23612449 - 23612493
Alignment:
Q  26 tttattacttcgatcgaatttggtacacttgccaaatatctatca 70  Q
    |||| ||||||||| | ||||||||||||||||||| ||||||||    
T  23612449 tttactacttcgatagtatttggtacacttgccaaaaatctatca 23612493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 70
Target Start/End: Complemental strand, 23619175 - 23619131
Alignment:
Q  26 tttattacttcgatcgaatttggtacacttgccaaatatctatca 70  Q
    |||| ||||||||| | ||||||||||||||||||| ||||||||    
T  23619175 tttactacttcgatagtatttggtacacttgccaaaaatctatca 23619131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 70
Target Start/End: Original strand, 31284984 - 31285028
Alignment:
Q  26 tttattacttcgatcgaatttggtacacttgccaaatatctatca 70  Q
    |||| ||||||||| | ||||||||||||||||||| ||||||||    
T  31284984 tttactacttcgatagtatttggtacacttgccaaaaatctatca 31285028  T

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Target: chr7 (Bit Score: 37; Significance: 0.000000000007; HSPs: 7)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 26 - 70
Target Start/End: Complemental strand, 23759653 - 23759609
Alignment:
Q  26 tttattacttcgatcgaatttggtacacttgccaaatatctatca 70  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||    
T  23759653 tttattacttcgattgaatttggttcacttgccaaatatctatca 23759609  T

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Target: chr7; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 70
Target Start/End: Original strand, 295062 - 295106
Alignment:
Q  26 tttattacttcgatcgaatttggtacacttgccaaatatctatca 70  Q
    |||||||||||||| ||||||||| ||||||||||||||| ||||    
T  295062 tttattacttcgattgaatttggttcacttgccaaatatccatca 295106  T

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Target: chr7; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 64
Target Start/End: Original strand, 11279692 - 11279730
Alignment:
Q  26 tttattacttcgatcgaatttggtacacttgccaaatat 64  Q
    |||||||||||||| ||||||||| ||||||||||||||    
T  11279692 tttattacttcgattgaatttggttcacttgccaaatat 11279730  T

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Target: chr7; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 71
Target Start/End: Complemental strand, 3861951 - 3861906
Alignment:
Q  26 tttattacttcgatcgaatttggtacacttgccaaatatctatcat 71  Q
    |||||||||||||| || | | ||||||||||||||||||||||||    
T  3861951 tttattacttcgattgactctagtacacttgccaaatatctatcat 3861906  T

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Target: chr7; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 70
Target Start/End: Original strand, 16166046 - 16166090
Alignment:
Q  26 tttattacttcgatcgaatttggtacacttgccaaatatctatca 70  Q
    |||| ||||||||| | ||||||||||||||||||| ||||||||    
T  16166046 tttactacttcgatagtatttggtacacttgccaaaaatctatca 16166090  T

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Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 72
Target Start/End: Complemental strand, 17857906 - 17857878
Alignment:
Q  44 tttggtacacttgccaaatatctatcatg 72  Q
    |||||||||||||||||||||||||||||    
T  17857906 tttggtacacttgccaaatatctatcatg 17857878  T

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Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 70
Target Start/End: Complemental strand, 37165961 - 37165917
Alignment:
Q  26 tttattacttcgatcgaatttggtacacttgccaaatatctatca 70  Q
    |||| ||||||||| | ||||||||||||||||||| ||||||||    
T  37165961 tttactacttcgatagtatttggtacacttgccaaaaatctatca 37165917  T

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Target: scaffold0440 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0440
Description:

Target: scaffold0440; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 70
Target Start/End: Original strand, 10065 - 10109
Alignment:
Q  26 tttattacttcgatcgaatttggtacacttgccaaatatctatca 70  Q
    |||||||||||||||||||||| | |||||||||||| |||||||    
T  10065 tttattacttcgatcgaatttgattcacttgccaaatttctatca 10109  T

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Target: chr1 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 1936833 - 1936873
Alignment:
Q  29 attacttcgatcgaatttggtacacttgccaaatatctatc 69  Q
    ||||||||||| ||||||||| |||||||||||||||||||    
T  1936833 attacttcgattgaatttggttcacttgccaaatatctatc 1936873  T

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Target: scaffold0191 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 70
Target Start/End: Original strand, 4229 - 4273
Alignment:
Q  26 tttattacttcgatcgaatttggtacacttgccaaatatctatca 70  Q
    |||| ||||||||| | ||||||||||||||||||| ||||||||    
T  4229 tttactacttcgatagtatttggtacacttgccaaacatctatca 4273  T

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Target: scaffold0048 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 70
Target Start/End: Original strand, 15724 - 15768
Alignment:
Q  26 tttattacttcgatcgaatttggtacacttgccaaatatctatca 70  Q
    |||| ||||||||| | ||||||||||||||||||| ||||||||    
T  15724 tttactacttcgatagtatttggtacacttgccaaaaatctatca 15768  T

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Target: scaffold0038 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 70
Target Start/End: Original strand, 31407 - 31451
Alignment:
Q  26 tttattacttcgatcgaatttggtacacttgccaaatatctatca 70  Q
    |||| ||||||||| | ||||||||||||||||||| ||||||||    
T  31407 tttactacttcgatagtatttggtacacttgccaaaaatctatca 31451  T

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