View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20706_low_71 (Length: 237)

Name: NF20706_low_71
Description: NF20706
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20706_low_71
NF20706_low_71
[»] scaffold0219 (1 HSPs)
scaffold0219 (39-237)||(27493-27691)
[»] chr7 (49 HSPs)
chr7 (67-228)||(3904676-3904837)
chr7 (39-237)||(26639241-26639442)
chr7 (43-237)||(36146459-36146652)
chr7 (14-237)||(41317485-41317707)
chr7 (51-237)||(4253579-4253765)
chr7 (51-237)||(36574566-36574751)
chr7 (42-237)||(8153266-8153459)
chr7 (130-228)||(43363531-43363632)
chr7 (56-237)||(48491517-48491696)
chr7 (103-237)||(5116587-5116722)
chr7 (140-237)||(23565112-23565210)
chr7 (56-233)||(27347755-27347930)
chr7 (67-237)||(18396263-18396435)
chr7 (39-118)||(30843402-30843480)
chr7 (56-237)||(4586099-4586278)
chr7 (105-237)||(29608722-29608854)
chr7 (56-237)||(1113595-1113774)
chr7 (126-237)||(4508757-4508869)
chr7 (56-237)||(47673994-47674173)
chr7 (103-199)||(1360243-1360338)
chr7 (126-237)||(8359367-8359480)
chr7 (126-237)||(2361023-2361135)
chr7 (126-237)||(22269978-22270090)
chr7 (52-237)||(31105444-31105627)
chr7 (56-237)||(31733020-31733199)
chr7 (56-237)||(43864182-43864361)
chr7 (56-237)||(48489369-48489548)
chr7 (127-237)||(6431977-6432088)
chr7 (166-237)||(32358105-32358177)
chr7 (155-237)||(2390316-2390399)
chr7 (155-237)||(2759248-2759331)
chr7 (56-185)||(5514113-5514240)
chr7 (53-228)||(27073751-27073925)
chr7 (53-228)||(27204388-27204562)
chr7 (126-230)||(31518800-31518905)
chr7 (56-237)||(35853853-35854031)
chr7 (161-237)||(6360003-6360080)
chr7 (56-237)||(14069884-14070063)
chr7 (56-237)||(14379912-14380091)
chr7 (126-237)||(26417321-26417433)
chr7 (56-237)||(29990993-29991170)
chr7 (199-237)||(48408883-48408921)
chr7 (135-237)||(23555055-23555157)
chr7 (51-193)||(24525992-24526132)
chr7 (166-237)||(30024783-30024855)
chr7 (155-237)||(3259029-3259112)
chr7 (155-233)||(4510603-4510682)
chr7 (155-233)||(4512445-4512524)
chr7 (155-237)||(48599385-48599468)
[»] chr4 (60 HSPs)
chr4 (51-237)||(6677401-6677587)
chr4 (51-232)||(44967885-44968065)
chr4 (14-237)||(45687233-45687456)
chr4 (39-213)||(3739177-3739351)
chr4 (50-237)||(6542230-6542417)
chr4 (50-184)||(23042894-23043026)
chr4 (56-237)||(24969049-24969229)
chr4 (78-224)||(32091438-32091583)
chr4 (154-237)||(33089911-33089996)
chr4 (107-237)||(21703886-21704018)
chr4 (43-237)||(37229772-37229966)
chr4 (58-237)||(26175687-26175864)
chr4 (39-237)||(29056278-29056476)
chr4 (122-226)||(44570427-44570531)
chr4 (51-237)||(52467405-52467590)
chr4 (56-237)||(5429617-5429796)
chr4 (62-237)||(8665351-8665525)
chr4 (56-237)||(54199957-54200136)
chr4 (155-237)||(27417016-27417099)
chr4 (141-237)||(12119559-12119657)
chr4 (56-237)||(34570465-34570644)
chr4 (14-237)||(36463440-36463662)
chr4 (56-237)||(56178688-56178866)
chr4 (126-237)||(12073397-12073509)
chr4 (56-237)||(12745487-12745666)
chr4 (154-237)||(22882801-22882886)
chr4 (154-237)||(22934465-22934550)
chr4 (154-237)||(33989877-33989962)
chr4 (154-237)||(34112850-34112935)
chr4 (76-228)||(38811249-38811399)
chr4 (135-237)||(4587973-4588076)
chr4 (49-237)||(31474081-31474268)
chr4 (56-237)||(47038462-47038639)
chr4 (126-237)||(2209718-2209831)
chr4 (103-233)||(35369500-35369626)
chr4 (155-237)||(40632479-40632562)
chr4 (51-225)||(48142440-48142614)
chr4 (126-237)||(9927509-9927621)
chr4 (154-237)||(26699493-26699578)
chr4 (166-237)||(50673898-50673970)
chr4 (126-236)||(54883025-54883136)
chr4 (155-237)||(6655990-6656073)
chr4 (155-237)||(36994558-36994641)
chr4 (155-237)||(37740659-37740742)
chr4 (155-237)||(50262752-50262835)
chr4 (140-237)||(379400-379497)
chr4 (125-233)||(53345221-53345331)
chr4 (173-237)||(8648191-8648256)
chr4 (126-237)||(26364241-26364353)
chr4 (173-237)||(35662493-35662558)
chr4 (56-237)||(52095413-52095592)
chr4 (166-237)||(46147442-46147514)
chr4 (166-237)||(48893689-48893761)
chr4 (56-237)||(52065534-52065715)
chr4 (179-237)||(12743976-12744035)
chr4 (179-237)||(12744098-12744157)
chr4 (179-237)||(12745365-12745424)
chr4 (199-227)||(19222387-19222415)
chr4 (101-189)||(35370448-35370535)
chr4 (126-237)||(46703505-46703618)
[»] chr2 (28 HSPs)
chr2 (39-233)||(13121689-13121880)
chr2 (58-159)||(28671869-28671968)
chr2 (154-229)||(30218103-30218180)
chr2 (39-233)||(11049470-11049667)
chr2 (52-237)||(36318060-36318243)
chr2 (14-237)||(36773457-36773679)
chr2 (154-237)||(24398090-24398175)
chr2 (134-237)||(33648184-33648289)
chr2 (56-237)||(42362290-42362469)
chr2 (56-237)||(38312178-38312357)
chr2 (103-228)||(42261545-42261674)
chr2 (155-237)||(45726963-45727046)
chr2 (56-237)||(2334469-2334647)
chr2 (56-237)||(5723307-5723484)
chr2 (56-237)||(11151642-11151821)
chr2 (56-237)||(17057420-17057599)
chr2 (56-237)||(17085403-17085582)
chr2 (56-237)||(29867807-29867986)
chr2 (135-237)||(6595057-6595159)
chr2 (58-237)||(723795-723972)
chr2 (155-237)||(1631783-1631866)
chr2 (155-237)||(35446935-35447018)
chr2 (129-237)||(33162501-33162610)
chr2 (49-237)||(42019921-42020110)
chr2 (56-237)||(4503184-4503362)
chr2 (133-237)||(24197909-24198014)
chr2 (176-237)||(36988127-36988189)
chr2 (50-90)||(40015154-40015193)
[»] chr8 (38 HSPs)
chr8 (39-237)||(7597535-7597732)
chr8 (50-233)||(11712055-11712238)
chr8 (56-186)||(38863809-38863936)
chr8 (39-224)||(3231859-3232044)
chr8 (50-193)||(41266900-41267041)
chr8 (51-193)||(29796418-29796558)
chr8 (39-237)||(30291526-30291724)
chr8 (106-229)||(10240139-10240264)
chr8 (56-237)||(4731596-4731775)
chr8 (64-237)||(8965742-8965914)
chr8 (56-237)||(43036361-43036540)
chr8 (62-233)||(44353736-44353906)
chr8 (51-237)||(18141753-18141937)
chr8 (126-237)||(40328784-40328897)
chr8 (56-237)||(30143280-30143457)
chr8 (58-237)||(1292514-1292691)
chr8 (56-237)||(15212724-15212903)
chr8 (56-237)||(33352088-33352267)
chr8 (126-232)||(19491755-19491862)
chr8 (62-237)||(40221689-40221862)
chr8 (39-237)||(40321001-40321197)
chr8 (155-237)||(42435042-42435125)
chr8 (51-233)||(3303725-3303905)
chr8 (122-237)||(11137027-11137146)
chr8 (154-237)||(1822325-1822410)
chr8 (154-237)||(1856770-1856855)
chr8 (126-237)||(4283529-4283641)
chr8 (56-233)||(27811216-27811391)
chr8 (39-237)||(32902224-32902421)
chr8 (179-237)||(38860414-38860472)
chr8 (155-237)||(18655434-18655517)
chr8 (159-237)||(30909406-30909484)
chr8 (126-233)||(1345426-1345534)
chr8 (155-237)||(42498228-42498311)
chr8 (179-237)||(5689329-5689388)
chr8 (58-94)||(8153701-8153737)
chr8 (179-237)||(9765803-9765862)
chr8 (180-237)||(34256558-34256616)
[»] chr6 (19 HSPs)
chr6 (51-237)||(4045355-4045541)
chr6 (126-237)||(2972990-2973102)
chr6 (126-237)||(3808759-3808872)
chr6 (60-237)||(5406251-5406424)
chr6 (60-237)||(5410576-5410749)
chr6 (60-237)||(5413445-5413618)
chr6 (126-237)||(17758028-17758140)
chr6 (126-237)||(21588936-21589048)
chr6 (126-237)||(21593669-21593781)
chr6 (56-237)||(28137459-28137638)
chr6 (56-237)||(2171583-2171760)
chr6 (52-237)||(26954337-26954519)
chr6 (155-237)||(26830174-26830257)
chr6 (59-237)||(9183082-9183258)
chr6 (141-237)||(5043648-5043744)
chr6 (126-237)||(31404726-31404837)
chr6 (155-237)||(603139-603222)
chr6 (135-225)||(186729-186820)
chr6 (103-237)||(25073551-25073686)
[»] chr3 (44 HSPs)
chr3 (58-237)||(33191771-33191948)
chr3 (39-237)||(1313855-1314053)
chr3 (14-237)||(29196437-29196661)
chr3 (51-237)||(32891036-32891221)
chr3 (51-237)||(44700529-44700714)
chr3 (56-237)||(40734436-40734615)
chr3 (56-237)||(44331483-44331662)
chr3 (62-237)||(4569895-4570069)
chr3 (140-237)||(46860494-46860591)
chr3 (56-237)||(45095103-45095280)
chr3 (56-237)||(51398752-51398931)
chr3 (39-237)||(51352162-51352361)
chr3 (62-237)||(9666517-9666692)
chr3 (39-237)||(31314366-31314562)
chr3 (56-237)||(760785-760964)
chr3 (56-237)||(5236507-5236686)
chr3 (43-228)||(8166516-8166702)
chr3 (103-225)||(20937639-20937762)
chr3 (126-237)||(30236130-30236242)
chr3 (126-237)||(34491217-34491329)
chr3 (56-237)||(9581221-9581399)
chr3 (39-199)||(37761560-37761718)
chr3 (135-237)||(54739004-54739107)
chr3 (106-237)||(1683462-1683593)
chr3 (126-237)||(43401852-43401965)
chr3 (56-237)||(40735321-40735500)
chr3 (62-212)||(5433951-5434102)
chr3 (126-237)||(22835053-22835165)
chr3 (155-237)||(49199520-49199604)
chr3 (155-237)||(29810902-29810985)
chr3 (126-237)||(43403795-43403908)
chr3 (155-237)||(46173391-46173474)
chr3 (155-237)||(54593738-54593821)
chr3 (56-237)||(19683940-19684119)
chr3 (103-231)||(35138762-35138891)
chr3 (14-83)||(2075260-2075330)
chr3 (154-237)||(25491018-25491103)
chr3 (117-199)||(28253357-28253439)
chr3 (105-199)||(36796770-36796863)
chr3 (135-237)||(5373247-5373351)
chr3 (155-237)||(7762299-7762382)
chr3 (111-237)||(26323124-26323251)
chr3 (176-237)||(9636177-9636239)
chr3 (167-237)||(16499075-16499146)
[»] chr5 (24 HSPs)
chr5 (14-237)||(13695741-13695964)
chr5 (56-237)||(3325851-3326031)
chr5 (103-237)||(10054867-10055001)
chr5 (134-236)||(316776-316879)
chr5 (56-237)||(13488141-13488320)
chr5 (155-237)||(22097898-22097980)
chr5 (62-237)||(28278260-28278433)
chr5 (56-228)||(32579161-32579333)
chr5 (50-237)||(9049393-9049578)
chr5 (56-237)||(25412700-25412877)
chr5 (78-228)||(35616129-35616278)
chr5 (126-237)||(40147266-40147378)
chr5 (56-237)||(42428481-42428660)
chr5 (56-235)||(533707-533884)
chr5 (56-237)||(39468600-39468779)
chr5 (56-237)||(13239690-13239868)
chr5 (126-237)||(213470-213582)
chr5 (179-237)||(31992248-31992306)
chr5 (126-237)||(38747010-38747122)
chr5 (140-233)||(33831700-33831793)
chr5 (160-235)||(33906083-33906160)
chr5 (166-237)||(538070-538142)
chr5 (135-237)||(10700699-10700801)
chr5 (166-237)||(16452125-16452197)
[»] chr1 (47 HSPs)
chr1 (56-228)||(1050503-1050674)
chr1 (111-237)||(22079307-22079434)
chr1 (56-237)||(928027-928208)
chr1 (101-237)||(6808427-6808570)
chr1 (56-237)||(23555316-23555495)
chr1 (14-237)||(28265605-28265826)
chr1 (38-199)||(8871138-8871295)
chr1 (14-237)||(50167226-50167448)
chr1 (56-237)||(44455098-44455277)
chr1 (109-237)||(13938126-13938255)
chr1 (78-227)||(4535541-4535688)
chr1 (56-237)||(37282742-37282922)
chr1 (51-233)||(2263029-2263214)
chr1 (109-228)||(16914234-16914355)
chr1 (56-237)||(8550838-8551017)
chr1 (126-232)||(41360919-41361026)
chr1 (167-237)||(193657-193728)
chr1 (155-237)||(19754529-19754612)
chr1 (126-237)||(37033123-37033236)
chr1 (155-237)||(47255391-47255474)
chr1 (51-233)||(50169265-50169445)
chr1 (56-237)||(834218-834397)
chr1 (56-237)||(1833460-1833639)
chr1 (126-237)||(11348703-11348815)
chr1 (126-237)||(13547140-13547252)
chr1 (126-237)||(28220277-28220389)
chr1 (56-237)||(31659176-31659355)
chr1 (155-237)||(37503608-37503688)
chr1 (56-237)||(49918287-49918467)
chr1 (56-237)||(10925161-10925343)
chr1 (166-237)||(31925758-31925830)
chr1 (155-237)||(3156899-3156982)
chr1 (104-237)||(9109470-9109604)
chr1 (155-237)||(19752720-19752803)
chr1 (126-237)||(37168302-37168415)
chr1 (126-237)||(47115176-47115289)
chr1 (126-237)||(13549051-13549163)
chr1 (173-237)||(28223472-28223537)
chr1 (126-233)||(42298030-42298138)
chr1 (134-237)||(45644405-45644510)
chr1 (50-237)||(4552688-4552873)
chr1 (173-237)||(5459958-5460023)
chr1 (50-83)||(11031303-11031336)
chr1 (144-237)||(12661178-12661271)
chr1 (166-237)||(16455666-16455738)
chr1 (167-237)||(13659387-13659458)
chr1 (58-86)||(25116537-25116565)
[»] scaffold0053 (1 HSPs)
scaffold0053 (56-228)||(24990-25162)
[»] scaffold0002 (2 HSPs)
scaffold0002 (103-228)||(490380-490509)
scaffold0002 (179-237)||(434591-434650)
[»] scaffold0466 (1 HSPs)
scaffold0466 (155-235)||(7361-7442)
[»] scaffold0176 (1 HSPs)
scaffold0176 (166-237)||(18055-18126)
[»] scaffold0286 (1 HSPs)
scaffold0286 (179-237)||(11615-11674)
[»] scaffold0129 (1 HSPs)
scaffold0129 (51-83)||(19142-19174)
[»] scaffold0006 (1 HSPs)
scaffold0006 (167-237)||(149148-149219)


Alignment Details
Target: scaffold0219 (Bit Score: 94; Significance: 5e-46; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 39 - 237
Target Start/End: Complemental strand, 27691 - 27493
Alignment:
Q  39 gttctcttgaaaggttatcttgggttgggaaacatttgtaaacacattggatgagtaaaatcttattgagtctcttgttcttaggaagagattaggaaaa 138  Q
    |||| ||||| ||||| ||||| |||||||||||||||||||||| |||||||||| ||||||  ||||||||||||||||  ||||||||||  |||||    
T  27691 gttcacttgagaggttctcttgagttgggaaacatttgtaaacaccttggatgagtgaaatct--ttgagtctcttgttctagggaagagattgtgaaaa 27594  T
Q  139 tggtagaaatcaggttttgttcttggagagcttattgaaactaatttcttataac-cattt-tatctctttgtaaataactcattgatagtggattggag 236  Q
      |||||||| | || ||||||||| ||||||| ||||| |||||||||| |||| ||||| ||||||||||||||||||| ||||||||||||||||||    
T  27593 gagtagaaattatgtattgttcttgaagagcttgttgaagctaatttcttgtaactcatttgtatctctttgtaaataacttattgatagtggattggag 27494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 86; Significance: 3e-41; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 67 - 228
Target Start/End: Complemental strand, 3904837 - 3904676
Alignment:
Q  67 gaaacatttgtaaacacattggatgagtaaaatcttattgagtctcttgttcttaggaagagattaggaaaatggtagaaatcaggttttgttcttggag 166  Q
    ||||||||||||||||| ||||  |||| |||||  ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| |||    
T  3904837 gaaacatttgtaaacaccttgggcgagtgaaatc--attgagtctcttgttcttaggaagagattgggaaaatggtagaaattaggttttgttctttgag 3904740  T
Q  167 agcttattgaaactaatttcttataaccatttt--atctctttgtaaataactcattgatagtg 228  Q
    ||| |||||||  ||||||||| ||||  ||||  ||||||||||||| |||||||||||||||    
T  3904739 agcctattgaatgtaatttcttgtaacacttttgcatctctttgtaaagaactcattgatagtg 3904676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 39 - 237
Target Start/End: Original strand, 26639241 - 26639442
Alignment:
Q  39 gttctcttgaaaggttatcttgggttgggaaacatttgtaaacacattggatgagtaaaatcttattgagtctcttgttcttaggaagagattaggaaaa 138  Q
    ||||||||||  |||| ||||| |||||||||||||||||||||| || | |||||||||||  |||||||||||| || || ||||||||||  |||||    
T  26639241 gttctcttgagcggttctcttgcgttgggaaacatttgtaaacactttaggtgagtaaaatc--attgagtctcttctttttgggaagagattgtgaaaa 26639338  T
Q  139 tggtagaaatcaggttttgttcttggagagcttattgaaactaatttcttataaccattt------tatctctttgtaaataactcattgatagtggatt 232  Q
    |||||||||| ||| | ||||||||||||| || ||||   ||||||||| ||||| |||      ||| || ||||||||||||| |||||| ||||||    
T  26639339 tggtagaaattagg-tatgttcttggagagtttgttgatgttaatttcttgtaacccttttgtatatatatcattgtaaataactctttgataatggatt 26639437  T
Q  233 ggaga 237  Q
     ||||    
T  26639438 agaga 26639442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 43 - 237
Target Start/End: Complemental strand, 36146652 - 36146459
Alignment:
Q  43 tcttgaaaggttatcttgggttgggaaacatttgtaaacacattggatgagt-aaaatcttattgagtctcttgttcttaggaagagattaggaaaat-g 140  Q
    |||||| ||||| |||||||||||||||||||||||||||| |||| ||||| ||||||  ||||||| |||||||| | ||  |||||| ||||||| |    
T  36146652 tcttgagaggttctcttgggttgggaaacatttgtaaacaccttgggtgagtgaaaatc--attgagtgtcttgttcattgg-tgagattgggaaaatgg 36146556  T
Q  141 gtagaaatcaggttttgttcttggagagcttattgaaactaatttcttataaccattt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
    |||||||| ||  |||||| || | |||||| ||||| |||||||||   | |||||| ||||||||||| || ||||||||||||||||||| ||||    
T  36146555 gtagaaattagagtttgttatttgtgagcttgttgaagctaatttctgtaacccatttgtatctctttgt-aagaactcattgatagtggatttgaga 36146459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 14 - 237
Target Start/End: Complemental strand, 41317707 - 41317485
Alignment:
Q  14 tttagggttgagtgtctttg-taaatgttctcttgaaaggttatcttgggttgggaaacatttgtaaacacattggatgagt-aaaatcttattgagtct 111  Q
    |||||||||||| ||||||| | |  ||||||||||  |||| ||||||||||||||||||| |||||||| |||||||||| ||||||  |||||||||    
T  41317707 tttagggttgagggtctttgattagggttctcttgaggggttctcttgggttgggaaacatt-gtaaacaccttggatgagtgaaaatc--attgagtct 41317611  T
Q  112 cttgttcttaggaagagattaggaaaat-ggtagaaatcaggttttgttcttggagagcttattgaaactaatttcttataa-ccattt-tatctctttg 208  Q
    ||||||| | ||  |||||| ||||||| ||||||||| ||| || |||||| | |||||| |  || |||||||||| ||| |||||| |||| |||||    
T  41317610 cttgttcattggt-gagattgggaaaattggtagaaattagggtt-gttctttgtgagcttgtcaaagctaatttcttgtaatccatttgtatccctttg 41317513  T
Q  209 taaataactcattgatagtggattggaga 237  Q
    |||  ||||||||||||||||||||||||    
T  41317512 taag-aactcattgatagtggattggaga 41317485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 51 - 237
Target Start/End: Complemental strand, 4253765 - 4253579
Alignment:
Q  51 ggttatcttgggttgggaaacatttgtaaacacattggatgagt-aaaatcttattgagtctcttgttcttaggaagagattaggaaaatggtagaaatc 149  Q
    |||| ||||||||||| |||||||||||||||| || | ||||| ||||||  ||||||| |||||||| | ||  || ||| | ||||||||||||||     
T  4253765 ggttctcttgggttggaaaacatttgtaaacaccttaggtgagtgaaaatc--attgagtttcttgttcattggt-gaaattggtaaaatggtagaaatt 4253669  T
Q  150 aggttttgttcttggagagcttattgaaactaatttcttataaccattt--tatctctttgtaaataactcattgatagtggattggaga 237  Q
    ||| ||||||||| | |||||| ||||| |||||||| | ||||| |||  |||||||||| ||| |||||||||||| |||||| ||||    
T  4253668 agggtttgttctttgtgagcttgttgaagctaatttcatgtaacccttttatatctctttggaaagaactcattgataatggattagaga 4253579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 51 - 237
Target Start/End: Complemental strand, 36574751 - 36574566
Alignment:
Q  51 ggttatcttgggttgggaaacatttgtaaacacattggatgagtaaaatcttattgagtctcttgttcttaggaagagattaggaaaatggtagaaatca 150  Q
    |||| ||||||||||| |||||||||||||||| || | ||||| |||  |||| |||| |||||||  | ||| |||||| || ||| ||||||||| |    
T  36574751 ggttctcttgggttggaaaacatttgtaaacaccttaggtgagtgaaaa-ttatcgagtgtcttgtttattgga-gagattggggaaa-ggtagaaatta 36574655  T
Q  151 ggttttgttcttggagagcttattgaaactaatttcttataaccattttat--ctctttgtaaataactcattgatagtggattggaga 237  Q
     | ||||||||| | ||| || ||||| |||||||||| ||||| ||||||  ||||||||||| |||||||||||||||| |||||||    
T  36574654 agatttgttctttgtgagtttgttgaagctaatttcttgtaacccttttatatctctttgtaaagaactcattgatagtggtttggaga 36574566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 42 - 237
Target Start/End: Original strand, 8153266 - 8153459
Alignment:
Q  42 ctcttgaaaggttatcttgggttgggaaacatttgtaaacacattggatgagt-aaaatcttattgagtctcttgttcttaggaagagattaggaaaatg 140  Q
    |||||||  |||| ||||||||||||||||||| ||||||||||||| ||||| ||||||  ||||||| |||||||| | ||  |||||| ||||||||    
T  8153266 ctcttgaggggttctcttgggttgggaaacatt-gtaaacacattgggtgagtgaaaatc--attgagtgtcttgttcattggt-gagattgggaaaatg 8153361  T
Q  141 -gtagaaatcaggttttgttcttggagagcttattgaaactaatttcttataac-cattt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
     |||||||| ||| || |||||| | ||| || |  || |||||||||| |||| ||||| ||||||||||||| |||||||||||||||||||||||||    
T  8153362 agtagaaattagggtt-gttctttgtgagattgtcaaagctaatttcttgtaactcatttgtatctctttgtaa-taactcattgatagtggattggaga 8153459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 130 - 228
Target Start/End: Complemental strand, 43363632 - 43363531
Alignment:
Q  130 ttaggaaaatggtagaaatcaggttttgttcttggagagcttattgaaactaatttcttataaccattt--tatctc--tttgtaaataactcattgata 225  Q
    ||||||||||||||||||| |||||| ||||||||||||||| ||||||||||||| || ||||  |||  ||||||  |||||||||||||||||||||    
T  43363632 ttaggaaaatggtagaaattaggttt-gttcttggagagcttgttgaaactaatttattgtaactcttttgtatctctatttgtaaataactcattgata 43363534  T
Q  226 gtg 228  Q
    |||    
T  43363533 gtg 43363531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 56 - 237
Target Start/End: Original strand, 48491517 - 48491696
Alignment:
Q  56 tcttgggttgggaaacatttgtaaacacattggatgagt-aaaatcttattgagtctcttgttcttaggaagagattaggaaaatgg-tagaaatcaggt 153  Q
    ||||||||||||||||||| |||||||| |||| ||||| ||||||  ||||||| |||||||| | ||  |||||| ||||||||| ||||||| |||     
T  48491517 tcttgggttgggaaacatt-gtaaacactttgggtgagtgaaaatc--attgagtgtcttgttcattggt-gagattgggaaaatgggtagaaattaggg 48491612  T
Q  154 tttgttcttggagagcttattgaaactaatttcttataacc-attt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
    || |||||| | || ||| ||||| |||||||||| ||||| |||| |||||||||| ||| ||||||||||||||||||||||||    
T  48491613 tt-gttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctctttg-aaagaactcattgatagtggattggaga 48491696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 103 - 237
Target Start/End: Original strand, 5116587 - 5116722
Alignment:
Q  103 attgagtctcttgttcttaggaagagattaggaaaatggtagaaatcaggttttgttcttggagagcttattgaaactaatttcttataaccatttt--a 200  Q
    |||||||||||||||  | ||| |||||||||||||  |||||||| |||||| ||||||||| || || |||||  |||||| || ||| | ||||  |    
T  5116587 attgagtctcttgtttatgggaggagattaggaaaagagtagaaattaggttt-gttcttggatagtttgttgaagataatttattgtaaaccttttgta 5116685  T
Q  201 tctctttgtaaataactcattgatagtggattggaga 237  Q
    |||||||||||| ||||||||||||||| ||||||||    
T  5116686 tctctttgtaaagaactcattgatagtgaattggaga 5116722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 140 - 237
Target Start/End: Complemental strand, 23565210 - 23565112
Alignment:
Q  140 ggtagaaatcaggttttgttcttggagagcttattgaaactaatttcttataaccattt--tatctctttgtaaataactcattgatagtggattggaga 237  Q
    ||||||||| |||| |||||||| | |||||| |||||||||||||||| ||||  |||  ||||||||||| || ||||||||||||||||||||||||    
T  23565210 ggtagaaattaggtcttgttctttgtgagcttgttgaaactaatttcttgtaactcttttgtatctctttgt-aagaactcattgatagtggattggaga 23565112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 56 - 233
Target Start/End: Original strand, 27347755 - 27347930
Alignment:
Q  56 tcttgggttgggaaacatttgtaaacacattggatgagt-aaaatcttattgagtctcttgttcttaggaagagattaggaaaatgg-tagaaatcaggt 153  Q
    |||| |||||||||||||| ||||||||||||| ||||| ||||||  ||||||| |||||||| | ||  |||||| ||||||||| ||||||| |||     
T  27347755 tcttaggttgggaaacatt-gtaaacacattgggtgagtgaaaatc--attgagtgtcttgttcattggt-gagattgggaaaatgggtagaaattagga 27347850  T
Q  154 tttgttcttggagagcttattgaaactaatttcttataacc-attt-tatctctttgtaaataactcattgatagtggattg 233  Q
    || |||||| | || ||| ||||| |||||||||| ||||| |||| |||||||||||||  ||||||||||||||||||||    
T  27347851 tt-gttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctctttgtaag-aactcattgatagtggattg 27347930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 67 - 237
Target Start/End: Original strand, 18396263 - 18396435
Alignment:
Q  67 gaaacatttgtaaacacattggatgagtaaaatcttattgagtctcttgttcttaggaagagattaggaaaatg---gtagaaatcaggttttgttcttg 163  Q
    ||||||||||||||||| |||| ||||| ||||  | |||||||  ||||||||  ||||||||| | ||||     |||||||| ||||||||||||||    
T  18396263 gaaacatttgtaaacaccttgggtgagtgaaat--tgttgagtccattgttcttgagaagagattggaaaaaaaaaagtagaaattaggttttgttcttg 18396360  T
Q  164 gagagcttattgaaactaatttcttataaccattt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
    ||||| || ||||| ||| ||| || ||||  ||| ||||||||| |||| || |||||||||| ||||||||||    
T  18396361 gagagtttgttgaacctatttttttgtaacattttgtatctctttataaagaattcattgatagaggattggaga 18396435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 39 - 118
Target Start/End: Complemental strand, 30843480 - 30843402
Alignment:
Q  39 gttctcttgaaaggttatcttgggttgggaaacatttgtaaacacattggatgag-taaaatcttattgagtctcttgttc 118  Q
    |||||||||||||||| |||||||||| ||||||||||||||||| || |||||| |||||||  ||||||| ||||||||    
T  30843480 gttctcttgaaaggttctcttgggttgagaaacatttgtaaacaccttagatgagttaaaatc--attgagtatcttgttc 30843402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 56 - 237
Target Start/End: Original strand, 4586099 - 4586278
Alignment:
Q  56 tcttgggttgggaaacatttgtaaacacattggatgagta-aaatcttattgagtctcttgttcttaggaagagattaggaaaatgg-tagaaatcaggt 153  Q
    ||||||||||||||||||| |||||||| |||| |||||  |||||  ||||||| |||||||| | ||  |||||| ||||||||| ||||||| |||     
T  4586099 tcttgggttgggaaacatt-gtaaacaccttgggtgagtgtaaatc--attgagtgtcttgttcattggt-gagattgggaaaatgggtagaaattaggg 4586194  T
Q  154 tttgttcttggagagcttattgaaactaatttcttataacca--ttttatctctttgtaaataactcattgatagtggattggaga 237  Q
    || |||||| | || ||| ||||| ||||||| || |||||   ||||||||||||||||  ||||||||||||||||||||||||    
T  4586195 tt-gttctttgtgaacttgttgaagctaattttttgtaacccatttttatctctttgtaag-aactcattgatagtggattggaga 4586278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 105 - 237
Target Start/End: Original strand, 29608722 - 29608854
Alignment:
Q  105 tgagtctcttgttcttaggaagagattaggaaaatgg-tagaaatcaggttttgttcttggagagcttattgaaactaatttcttataac-cattt-tat 201  Q
    ||||| |||||||||| ||  |||||| ||||||||| ||||||| ||| || |||||| | |||||| ||||| |||||||||| |||| ||||| |||    
T  29608722 tgagtgtcttgttctttggt-gagattgggaaaatgggtagaaattagggtt-gttctttgtgagcttgttgaagctaatttcttgtaactcatttgtat 29608819  T
Q  202 ctctttgtaaataactcattgatagtggattggaga 237  Q
    ||||||||||  ||||||||||||||||||||||||    
T  29608820 ctctttgtaag-aactcattgatagtggattggaga 29608854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 237
Target Start/End: Original strand, 1113595 - 1113774
Alignment:
Q  56 tcttgggttgggaaacatttgtaaacacattggatgagt-aaaatcttattgagtctcttgttcttaggaagagattaggaaaatgg-tagaaatcaggt 153  Q
    ||||||||||||||||||| |||||||  |||| ||||| ||||||  ||||||| |||||||| |  |  ||||||  |||||||| ||||||| |||     
T  1113595 tcttgggttgggaaacatt-gtaaacaacttgggtgagtgaaaatc--attgagtgtcttgttcatttgt-gagattgagaaaatggatagaaattaggg 1113690  T
Q  154 tttgttcttggagagcttattgaaactaatttcttataa-ccattt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
    || |||||| | |||||| ||||| |||||||||||||| |||||| ||||||||||| || |||||||||||||| |||||||||    
T  1113691 tt-gttctttgtgagcttgttgaagctaatttcttataacccatttgtatctctttgt-aagaactcattgatagtagattggaga 1113774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 126 - 237
Target Start/End: Complemental strand, 4508869 - 4508757
Alignment:
Q  126 gagattaggaaaatg-gtagaaatcaggttttgttcttggagagcttattgaaactaatttcttataa-ccattt-tatctctttgtaaataactcattg 222  Q
    |||||| |||||||| |||||||| ||| || |||||| | |||||||||||| |||||||||| ||| |||||| ||||||||||| || |||||||||    
T  4508869 gagattgggaaaatgagtagaaattagggtt-gttctttgtgagcttattgaagctaatttcttgtaacccatttgtatctctttgt-aagaactcattg 4508772  T
Q  223 atagtggattggaga 237  Q
    | |||||||||||||    
T  4508771 agagtggattggaga 4508757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 237
Target Start/End: Complemental strand, 47674173 - 47673994
Alignment:
Q  56 tcttgggttgggaaacatttgtaaacacattggatgagt-aaaatcttattgagtctcttgttcttaggaagagattaggaaaatgg-tagaaatcaggt 153  Q
    ||||||||||| ||||||| |||||||| |||| ||||| ||||||  ||||||| |||||||| | ||  ||||||  |||||||| ||||||| |||     
T  47674173 tcttgggttggaaaacatt-gtaaacaccttgggtgagtgaaaatc--attgagtgtcttgttcattggt-gagattgagaaaatgggtagaaattaggg 47674078  T
Q  154 tttgttcttggagagcttattgaaactaatttcttataacc-attt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
    || |||||| | || ||| ||||| |||||||||| ||||| |||| |||||||||||||  ||||||||||||||||||||||||    
T  47674077 tt-gttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctctttgtaag-aactcattgatagtggattggaga 47673994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 103 - 199
Target Start/End: Complemental strand, 1360338 - 1360243
Alignment:
Q  103 attgagtctcttgttcttaggaagagattaggaaaatggtagaaatcaggttttgttcttggagagcttattgaaactaatttcttataaccatttt 199  Q
    |||||||||||||||| | | | |||||| |||||| ||||||||| |||||||| ||||||||| ||| ||||| | |||||||| ||||| ||||    
T  1360338 attgagtctcttgttcatggaatgagattgggaaaaaggtagaaattaggttttg-tcttggagaacttgttgaagcgaatttcttgtaaccctttt 1360243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 237
Target Start/End: Complemental strand, 8359480 - 8359367
Alignment:
Q  126 gagattaggaaaatgg-tagaaatcaggttttgttcttggagagcttattgaaactaatttcttataacc-atttt--atctctttgtaaataactcatt 221  Q
    |||||| ||||||||| ||||||| ||| ||| ||||| | |||||| || ||||||||||||| ||||| |||||  ||||||||||||  ||||||||    
T  8359480 gagattgggaaaatgggtagaaattagggttt-ttctttgtgagcttgtttaaactaatttcttgtaacccattttgtatctctttgtaag-aactcatt 8359383  T
Q  222 gatagtggattggaga 237  Q
    ||||||||||||||||    
T  8359382 gatagtggattggaga 8359367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 126 - 237
Target Start/End: Complemental strand, 2361135 - 2361023
Alignment:
Q  126 gagattaggaaaatgg-tagaaatcaggttttgttcttggagagcttattgaaactaatttcttataac-cattt-tatctctttgtaaataactcattg 222  Q
    |||||| ||||||||| ||||||| ||| || |||||| | |||||| ||||| |||||||||| |||| ||||| |||||||||||||  |||||||||    
T  2361135 gagattgggaaaatgggtagaaattagggtt-gttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatctctttgtaag-aactcattg 2361038  T
Q  223 atagtggattggaga 237  Q
    |||||||||| ||||    
T  2361037 atagtggatttgaga 2361023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 126 - 237
Target Start/End: Original strand, 22269978 - 22270090
Alignment:
Q  126 gagattaggaaaatgg-tagaaatcaggttttgttcttggagagcttattgaaactaatttcttataacc-attt-tatctctttgtaaataactcattg 222  Q
    |||||| ||||||||| ||||||| ||| || |||||| | |||||| ||||| |||||||||| ||||| |||| |||||||||||||  |||| ||||    
T  22269978 gagattgggaaaatgggtagaaattagggtt-gttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgtaag-aactgattg 22270075  T
Q  223 atagtggattggaga 237  Q
    |||||||||||||||    
T  22270076 atagtggattggaga 22270090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 52 - 237
Target Start/End: Complemental strand, 31105627 - 31105444
Alignment:
Q  52 gttatcttgggttgggaaacatttgtaaacacattggatgagt-aaaatcttattgagtctcttgttcttaggaagagattaggaaaatgg-tagaaatc 149  Q
    ||||||||||| || |||||||| |||||||| |||| ||||| ||||||  ||||||| |||||||| |  |  |||||| ||||||||| |||||||     
T  31105627 gttatcttggggtgagaaacatt-gtaaacaccttgggtgagtgaaaatc--attgagtgtcttgttcatttgt-gagattgggaaaatgggtagaaatt 31105532  T
Q  150 aggttttgttcttggagagcttattgaaactaatttcttataacc-attt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
    || |||| ||||| | |||||| ||||| |||||||||| ||||| |||| ||||| |||||||  ||||||||||| ||||||||||||    
T  31105531 agatttt-ttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctttttgtaag-aactcattgatggtggattggaga 31105444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 56 - 237
Target Start/End: Complemental strand, 31733199 - 31733020
Alignment:
Q  56 tcttgggttgggaaacatttgtaaacacattggatgagt-aaaatcttattgagtctcttgttcttaggaagagattaggaaaatgg-tagaaatcaggt 153  Q
    ||||||||||||||||||| |||||||| |||| ||||| ||||||  ||||||| |||||||| | ||  |||| |  |||||||| ||||||| |||     
T  31733199 tcttgggttgggaaacatt-gtaaacaccttgggtgagtgaaaatc--attgagtgtcttgttcattggt-gagactgagaaaatgggtagaaattaggg 31733104  T
Q  154 tttgttcttggagagcttattgaaactaatttcttataacc-attt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
    || |||||| | ||||||  |||| |||||||||| ||||| |||| |||||||||||||  |||||||||||| |||||||||||    
T  31733103 tt-gttctttgtgagcttggtgaagctaatttcttgtaacccatttgtatctctttgtaag-aactcattgatactggattggaga 31733020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 56 - 237
Target Start/End: Original strand, 43864182 - 43864361
Alignment:
Q  56 tcttgggttgggaaacatttgtaaacacattggatgagt-aaaatcttattgagtctcttgttcttaggaagagattaggaaaatgg-tagaaatcaggt 153  Q
    ||||||||||||||||||| |||||||| |||| ||||| ||||||  ||||||| |||||||| | ||  |||||| | ||| ||| ||||||| |||     
T  43864182 tcttgggttgggaaacatt-gtaaacaccttgggtgagtgaaaatc--attgagtgtcttgttcattggt-gagattggaaaagtgggtagaaattaggg 43864277  T
Q  154 tttgttcttggagagcttattgaaactaatttcttataacc-attt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
    || |||||| | || ||| ||||| |||||||| | ||||| |||| |||||||||||||| |||| |||||||||||||||||||    
T  43864278 tt-gttctttgtgaacttgttgaagctaatttcctgtaacccatttgtatctctttgtaaa-aactaattgatagtggattggaga 43864361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 56 - 237
Target Start/End: Original strand, 48489369 - 48489548
Alignment:
Q  56 tcttgggttgggaaacatttgtaaacacattggatgagt-aaaatcttattgagtctcttgttcttaggaagagattaggaaaatgg-tagaaatcaggt 153  Q
    ||||||||||||||||||| |||||||| |||| ||||| ||||||  ||| | | |||||||| | ||  |||||| ||||||||| ||||||| |||     
T  48489369 tcttgggttgggaaacatt-gtaaacaccttgggtgagtgaaaatc--attaaatgtcttgttcattggt-gagattgggaaaatgggtagaaattaggg 48489464  T
Q  154 tttgttcttggagagcttattgaaactaatttcttataacc-attt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
    || |||||| || | ||| ||||| |||||||||| ||||| |||| |||||||||| || ||||||||| |||||||||||||||    
T  48489465 tt-gttctttgaaaacttgttgaagctaatttcttgtaacccatttgtatctctttgcaa-taactcattcatagtggattggaga 48489548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 237
Target Start/End: Original strand, 6431977 - 6432088
Alignment:
Q  127 agattaggaaaatgg-tagaaatcaggttttgttcttggagagcttattgaaactaatttcttataacc-attt-tatctctttgtaaataactcattga 223  Q
    ||||| ||||||||| ||||||| ||| || |||||| | |||||| ||||| |||||||||| ||||| |||| |||||||||||||  ||||| ||||    
T  6431977 agattgggaaaatgggtagaaattaggatt-gttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgtaag-aactcgttga 6432074  T
Q  224 tagtggattggaga 237  Q
    ||||||||||||||    
T  6432075 tagtggattggaga 6432088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 237
Target Start/End: Complemental strand, 32358177 - 32358105
Alignment:
Q  166 gagcttattgaaactaatttcttataacc-attt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
    |||||| ||||| |||||||||| ||||| |||| |||||||||||||  ||||||||||||||||||||||||    
T  32358177 gagcttgttgaagctaatttcttgtaacccatttgtatctctttgtaag-aactcattgatagtggattggaga 32358105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 237
Target Start/End: Original strand, 2390316 - 2390399
Alignment:
Q  155 ttgttcttggagagcttattgaaactaatttcttataacc-attt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
    |||||||| | |||||| ||||| |||||||||| ||||| |||| ||||||||||||| ||||||||  |||||||||||||||    
T  2390316 ttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgtaa-taactcatatatagtggattggaga 2390399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 237
Target Start/End: Complemental strand, 2759331 - 2759248
Alignment:
Q  155 ttgttcttggagagcttattgaaactaatttcttataac-cattt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
    |||||||| | || ||| ||||| |||||||||| |||| ||||| |||||||||||||  ||||||||||||||||||||||||    
T  2759331 ttgttctttgtgaacttgttgaagctaatttcttgtaactcatttatatctctttgtaag-aactcattgatagtggattggaga 2759248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 185
Target Start/End: Complemental strand, 5514240 - 5514113
Alignment:
Q  56 tcttgggttgggaaacatttgtaaacacattggatgagt-aaaatcttattgagtctcttgttcttaggaagagattaggaaaatggtagaaatcaggtt 154  Q
    ||||||||||||||||| |||||||||| || ||||||| ||||||  ||||||| |||||||| |  | |||||||   ||||  |||||||| | |||    
T  5514240 tcttgggttgggaaacacttgtaaacaccttcgatgagtgaaaatc--attgagtttcttgttcatttg-agagattgaaaaaagagtagaaattatgtt 5514144  T
Q  155 ttgttcttggagagcttattgaaactaattt 185  Q
    |||||||| | |||||| ||||| |||||||    
T  5514143 ttgttctttgtgagcttgttgaagctaattt 5514113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 228
Target Start/End: Original strand, 27073751 - 27073925
Alignment:
Q  53 ttatcttgggttgggaaacatttgtaaacacattggatgagtaaaatcttattgagtctcttgttcttaggaagagattaggaaaatggtagaaatcagg 152  Q
    |||||| |||||| ||||  ||| || |||| |||||||||| |||||  ||||| ||| |||||||| |||||| ||| | ||| |||||||||| | |    
T  27073751 ttatctcgggttgagaaaattttatatacaccttggatgagtgaaatc--attgaatcttttgttcttgggaagacattggaaaattggtagaaat-atg 27073847  T
Q  153 ttttgttcttggagagcttattgaaactaatttcttataaccatttt--atctctttgtaaataactcattgatagtg 228  Q
    |||||||| |   ||| ||||||||  ||||||||| ||||  ||||  ||||||||||||| ||||| |||| ||||    
T  27073848 ttttgttcgttatgagtttattgaagttaatttcttgtaactcttttgtatctctttgtaaagaactcgttgacagtg 27073925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 228
Target Start/End: Complemental strand, 27204562 - 27204388
Alignment:
Q  53 ttatcttgggttgggaaacatttgtaaacacattggatgagtaaaatcttattgagtctcttgttcttaggaagagattaggaaaatggtagaaatcagg 152  Q
    |||||| |||||| ||||  ||| || |||| |||||||||| |||||  ||||| ||| |||||||| |||||| ||| | ||| |||||||||| | |    
T  27204562 ttatctcgggttgagaaaattttatatacaccttggatgagtgaaatc--attgaatcttttgttcttgggaagacattggaaaattggtagaaat-atg 27204466  T
Q  153 ttttgttcttggagagcttattgaaactaatttcttataaccatttt--atctctttgtaaataactcattgatagtg 228  Q
    |||||||| |   ||| ||||||||  ||||||||| ||||  ||||  ||||||||||||| ||||| |||| ||||    
T  27204465 ttttgttcgttatgagtttattgaagttaatttcttgtaactcttttgtatctctttgtaaagaactcgttgacagtg 27204388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 230
Target Start/End: Original strand, 31518800 - 31518905
Alignment:
Q  126 gagattaggaaaat-ggtagaaatcaggttttgttcttggagagcttattgaaactaatttcttataac-cattt-tatctctttgtaaataactcattg 222  Q
    |||||| ||||||| ||||||||| |||||| |||||| | |||||||||||| ||| |||||| |||| ||||| ||||||||||| || |||||||||    
T  31518800 gagattgggaaaataggtagaaattaggttt-gttctttgtgagcttattgaagctagtttcttgtaactcatttgtatctctttgt-aagaactcattg 31518897  T
Q  223 atagtgga 230  Q
    | ||||||    
T  31518898 acagtgga 31518905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 237
Target Start/End: Original strand, 35853853 - 35854031
Alignment:
Q  56 tcttgggttgggaaacatttgtaaacacattggatgagt-aaaatcttattgagtctcttgttcttaggaagagattaggaaaatgg-tagaaatcaggt 153  Q
    ||||||||||||||||||| |||||||| |||| ||||| ||||||  ||||||| |||||||| | ||  |||||| |||||| || ||||||| |||     
T  35853853 tcttgggttgggaaacatt-gtaaacaccttgg-tgagtgaaaatc--attgagtgtcttgttcattggt-gagattgggaaaaagggtagaaattaggg 35853947  T
Q  154 tttgttcttggagagcttattgaaactaatttcttataaccatttt--atctctttgtaaataactcattgatagtggattggaga 237  Q
    || |||||| | || ||| |  || |||||||||| ||||| ||||  ||||||||||||  ||||||||||||||||||||||||    
T  35853948 tt-gttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctctttgtaag-aactcattgatagtggattggaga 35854031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 237
Target Start/End: Complemental strand, 6360080 - 6360003
Alignment:
Q  161 ttggagagcttattgaaactaatttcttataacc-attt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
    |||| |||||| ||||| |||||||||| ||||| |||| |||||||||||||  |||||||||||||| |||||||||    
T  6360080 ttggtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgtaag-aactcattgatagttgattggaga 6360003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 237
Target Start/End: Complemental strand, 14070063 - 14069884
Alignment:
Q  56 tcttgggttgggaaacatttgtaaacacattggatgagt-aaaatcttattgagtctcttgttcttaggaagagattaggaaaatgg-tagaaatcaggt 153  Q
    |||||||||||| |||||| |||||||| |||| ||||| ||||||  ||||||| |||||||| | ||  |||||| |||||| || ||||||| |||     
T  14070063 tcttgggttgggtaacatt-gtaaacaccttgggtgagtgaaaatc--attgagtgtcttgttcattggt-gagattgggaaaaagggtagaaattaggg 14069968  T
Q  154 tttgttcttggagagcttattgaaactaatttcttataacc-attt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
    || |||||| | || ||| |  || |||||||||| ||||| |||| |||||||||||||  ||||||||||||||||||||||||    
T  14069967 tt-gttctttgtgaacttgtcaaagctaatttcttgtaacccatttgtatctctttgtaag-aactcattgatagtggattggaga 14069884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 237
Target Start/End: Complemental strand, 14380091 - 14379912
Alignment:
Q  56 tcttgggttgggaaacatttgtaaacacattggatgagt-aaaatcttattgagtctcttgttcttaggaagagattaggaaaatgg-tagaaatcaggt 153  Q
    |||||||||||| |||||| |||||||| |||| ||||| ||||||  ||||||| |||||||| | ||  |||||| |||||| || ||||||| |||     
T  14380091 tcttgggttgggtaacatt-gtaaacaccttgggtgagtgaaaatc--attgagtgtcttgttcattggt-gagattgggaaaaagggtagaaattaggg 14379996  T
Q  154 tttgttcttggagagcttattgaaactaatttcttataacc-attt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
    || |||||| | || ||| |  || |||||||||| ||||| |||| |||||||||||||  ||||||||||||||||||||||||    
T  14379995 tt-gttctttgtgaacttgtcaaagctaatttcttgtaacccatttgtatctctttgtaag-aactcattgatagtggattggaga 14379912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 237
Target Start/End: Original strand, 26417321 - 26417433
Alignment:
Q  126 gagattaggaaaatgg-tagaaatcaggttttgttcttggagagcttattgaaactaatttcttataacc-attt-tatctctttgtaaataactcattg 222  Q
    |||||| ||||||||| ||||||| ||| || |||||| | |||||| |||||  ||||||||| ||||| |||| |||||||||||||  ||||| |||    
T  26417321 gagattgggaaaatgggtagaaattagggtt-gttctttgtgagcttgttgaagataatttcttgtaacccatttgtatctctttgtaag-aactcgttg 26417418  T
Q  223 atagtggattggaga 237  Q
    |||||||||||||||    
T  26417419 atagtggattggaga 26417433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 237
Target Start/End: Original strand, 29990993 - 29991170
Alignment:
Q  56 tcttgggttgggaaacatttgtaaacacattggatgagt-aaaatcttattgagtctcttgttcttaggaagagattaggaaaatggtagaaatcaggtt 154  Q
    ||||||||||||||||||| |||||||| |||| ||||| ||||||  ||||||| |||||||| | ||  |||||| |||||| | ||||||| ||| |    
T  29990993 tcttgggttgggaaacatt-gtaaacaccttgg-tgagtgaaaatc--attgagtgtcttgttcattggt-gagattgggaaaaggatagaaattagggt 29991087  T
Q  155 ttgttcttggagagcttattgaaactaatttcttataaccatttt--atctctttgtaaataactcattgatagtggattggaga 237  Q
    | ||| || | || ||| |  || |||||||||| ||||| ||||  |||||||| ||| |||||||||||||||||||||||||    
T  29991088 t-gttatttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctctttctaa-taactcattgatagtggattggaga 29991170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 199 - 237
Target Start/End: Original strand, 48408883 - 48408921
Alignment:
Q  199 tatctctttgtaaataactcattgatagtggattggaga 237  Q
    |||||||||  ||||||||||||||||||||||||||||    
T  48408883 tatctcttttgaaataactcattgatagtggattggaga 48408921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 135 - 237
Target Start/End: Original strand, 23555055 - 23555157
Alignment:
Q  135 aaaatggtagaaatcaggttttgttcttggagagcttattgaaactaatttcttataaccattttat--ctctttgtaaataactcattgatagtggatt 232  Q
    |||||||||||||| ||| || |||||| | || ||| ||||| |||||||||| ||||  |||| |  ||||||||||  |||||||||||||||||||    
T  23555055 aaaatggtagaaattagggtt-gttctttgtgaacttgttgaagctaatttcttgtaacacttttgtacctctttgtaag-aactcattgatagtggatt 23555152  T
Q  233 ggaga 237  Q
    |||||    
T  23555153 ggaga 23555157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 193
Target Start/End: Complemental strand, 24526132 - 24525992
Alignment:
Q  51 ggttatcttgggttgggaaacatttgtaaacacattggatgagt-aaaatcttattgagtctcttgttcttaggaagagattaggaaaatgg-tagaaat 148  Q
    |||| |||| |||||||||||||| |||||||| |||| ||||| ||||||  ||||||| |||||||| | ||  || ||| ||||||||| |||||||    
T  24526132 ggttctcttaggttgggaaacatt-gtaaacaccttgggtgagtgaaaatc--attgagtgtcttgttcattggt-gaaattgggaaaatgggtagaaat 24526037  T
Q  149 caggttttgttcttggagagcttattgaaactaatttcttataac 193  Q
     ||||||||||||| | |||||| |  || |||||||||| ||||    
T  24526036 taggttttgttctttgtgagcttgtcaaagctaatttcttgtaac 24525992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 237
Target Start/End: Complemental strand, 30024855 - 30024783
Alignment:
Q  166 gagcttattgaaactaatttcttataacc-attt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
    |||||| ||||| |||||||||| ||||| |||| |||||||||||||  ||||| ||||||||||||||||||    
T  30024855 gagcttgttgaagctaatttcttgtaacccatttgtatctctttgtaag-aactctttgatagtggattggaga 30024783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 237
Target Start/End: Original strand, 3259029 - 3259112
Alignment:
Q  155 ttgttcttggagagcttattgaaactaatttcttataac-cattt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
    |||||||| | |||||| || || ||||||| || |||| ||||| |||||||||||||| ||| ||||||||||||||||||||    
T  3259029 ttgttctttgtgagcttgtttaagctaatttattgtaactcatttgtatctctttgtaaa-aacccattgatagtggattggaga 3259112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 233
Target Start/End: Complemental strand, 4510682 - 4510603
Alignment:
Q  155 ttgttcttggagagcttattgaaactaatttcttataacc-attt-tatctctttgtaaataactcattgatagtggattg 233  Q
    |||||||| | ||| |||||||| |||||||||| ||||| |||| ||||||||| |||  ||||||||||||||||||||    
T  4510682 ttgttctttgtgagtttattgaagctaatttcttgtaacccatttgtatctctttataag-aactcattgatagtggattg 4510603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 233
Target Start/End: Complemental strand, 4512524 - 4512445
Alignment:
Q  155 ttgttcttggagagcttattgaaactaatttcttataacc-attt-tatctctttgtaaataactcattgatagtggattg 233  Q
    |||||||| | ||| |||||||| |||||||||| ||||| |||| ||||||||| |||  ||||||||||||||||||||    
T  4512524 ttgttctttgtgagtttattgaagctaatttcttgtaacccatttgtatctctttataag-aactcattgatagtggattg 4512445  T

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Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 237
Target Start/End: Complemental strand, 48599468 - 48599385
Alignment:
Q  155 ttgttcttggagagcttattgaaactaatttcttataac-cattt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
    |||||||| | |||||| ||||| |||||||||| |||| ||||| |||||||||| ||  | ||||||||||||||||||||||    
T  48599468 ttgttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatctctttggaag-agctcattgatagtggattggaga 48599385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 84; Significance: 5e-40; HSPs: 60)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 51 - 237
Target Start/End: Original strand, 6677401 - 6677587
Alignment:
Q  51 ggttatcttgggttgggaaacatttgtaaacacattggatgagtaaaatcttattgagtctcttgttcttaggaagagattaggaaaatggtagaaatca 150  Q
    |||| ||||||||||||||||||||||||||||||||||||||| |||  | |||||||||||||||||| |||||| ||| |||||||||||||||| |    
T  6677401 ggttctcttgggttgggaaacatttgtaaacacattggatgagtgaaa--taattgagtctcttgttcttgggaagaaatt-ggaaaatggtagaaatta 6677497  T
Q  151 gg-ttttgttcttggagagcttattgaaactaatttcttataaccattt--tatctctttgtaaataactcattgatagtggattggaga 237  Q
    || |||| |||||||||||||| ||||| |||||||||| ||||| |||  ||| |||||||||| || || |||||| |||||| ||||    
T  6677498 ggttttttttcttggagagcttgttgaagctaatttcttgtaacccttttgtatatctttgtaaagaagtctttgataatggatttgaga 6677587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 51 - 232
Target Start/End: Complemental strand, 44968065 - 44967885
Alignment:
Q  51 ggttatcttgggttgggaaacatttgtaaacacattggatgagtaaaatcttattgagtctcttgttcttaggaagagattaggaaaatggtagaaatca 150  Q
    |||| |||||| || ||||||||||||||||| ||||| ||||| |||||  |||||| || |||||||| |||||||||| |||||||||||||||| |    
T  44968065 ggttctcttggatttggaaacatttgtaaacaaattggttgagtgaaatc--attgagcctgttgttcttgggaagagattgggaaaatggtagaaatta 44967968  T
Q  151 ggttttgttcttggagagcttattgaaactaatttcttataaccattt-tatctctttgtaaataactcattgatagtggatt 232  Q
    ||||||| |||||||||||||  |||| | |||||||| ||||||||| |||||||||||||| ||||| |||| ||| ||||    
T  44967967 ggttttgctcttggagagcttgctgaagccaatttcttgtaaccatttgtatctctttgtaaaaaactcgttgagagtagatt 44967885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 14 - 237
Target Start/End: Complemental strand, 45687456 - 45687233
Alignment:
Q  14 tttagggttgagtgtctttg-taaatgttctcttgaaaggttatcttgggttgggaaacatttgtaaacacattggatgagtaaaatcttattgagtctc 112  Q
    |||||||||||| ||||||| | |  ||||||||||  |||| ||||||||||||||||||| |||||||| |||| ||||| |||| || |||| | ||    
T  45687456 tttagggttgagggtctttgattagggttctcttgaggggttctcttgggttgggaaacatt-gtaaacaccttgggtgagtgaaatttt-ttgattgtc 45687359  T
Q  113 ttgttcttaggaagagattaggaaaatggta-gaaatcaggttttgttcttggagagcttattgaaactaatttcttataac-cattt-tatctctttgt 209  Q
    |||||| | ||  |||||| ||||||||| | ||||| ||||||||||||| | |||||| |  || ||||||||||||||| ||||| ||||| |||||    
T  45687358 ttgttcattggt-gagattgggaaaatgggaagaaattaggttttgttctttgtgagcttgtcaaagctaatttcttataactcatttgtatctatttgt 45687260  T
Q  210 aaataactcattgatagtggattggaga 237  Q
    ||  ||||||||||||||||||||||||    
T  45687259 aag-aactcattgatagtggattggaga 45687233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 39 - 213
Target Start/End: Complemental strand, 3739351 - 3739177
Alignment:
Q  39 gttctcttgaaaggttatcttgggttgggaaacatttgtaaacacattggatgagtaaaatcttattgagtctcttgttcttaggaagagatt-aggaaa 137  Q
    |||||||||| ||||| | |||||||| |||||| |||||||| |||||||||  |||||||  |||||||||||  ||||| | |||||||| |  |||    
T  3739351 gttctcttgagaggttcttttgggttgagaaacagttgtaaacgcattggatgtataaaatc--attgagtctctgtttctttgaaagagattgaaaaaa 3739254  T
Q  138 atggtagaaatcaggttttgttcttggagagcttattgaaactaatttcttataacc-attttatctctttgtaaat 213  Q
    | |||| |||| || ||||||||||| | | ||||||||| |||||||||||| ||| ||| |||||||||||||||    
T  3739253 agggtaaaaattagattttgttcttgaataacttattgaagctaatttcttatgacctattgtatctctttgtaaat 3739177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 50 - 237
Target Start/End: Complemental strand, 6542417 - 6542230
Alignment:
Q  50 aggttatcttgggttgggaaacatttgtaaacacattggatgagtaaaatcttattgagtctcttgttcttaggaagagattagg--aaaatggtagaaa 147  Q
    ||||| ||||||||||||||||| |||||||||| |||| ||||| |||  ||||||||| |||||||| | ||  |||||| ||  |||||||||||||    
T  6542417 aggttctcttgggttgggaaaca-ttgtaaacaccttgggtgagtgaaa-attattgagtgtcttgttcattgg-ggagattgggaaaaaatggtagaaa 6542321  T
Q  148 tcaggttttgttcttggagagcttattgaaactaatttcttataaccattt--tatctctttgtaaataactcattgatagtggattggaga 237  Q
    | ||| ||||||||| | |||||| |||||||||||||||| | | | |||  ||||||||||| || ||||| ||||||||||||||||||    
T  6542320 ttaggatttgttctttgtgagcttgttgaaactaatttcttgttagccttttgtatctctttgt-aagaactcgttgatagtggattggaga 6542230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 50 - 184
Target Start/End: Complemental strand, 23043026 - 23042894
Alignment:
Q  50 aggttatcttgggttgggaaacatttgtaaacacattggatgagtaaaatcttattgagtctcttgttcttaggaagagattaggaaaatggtagaaatc 149  Q
    ||||| |||| | ||||||||||||||||||||| |||||||| | |||||  ||||| ||||||||| || |||||||||| |  |||| ||||||||     
T  23043026 aggttctcttagattgggaaacatttgtaaacaccttggatgaatgaaatc--attgaatctcttgtttttgggaagagattggacaaatagtagaaatt 23042929  T
Q  150 aggttttgttcttggagagcttattgaaactaatt 184  Q
    | |||||||| ||| ||||||| ||||||||||||    
T  23042928 atgttttgtttttgaagagcttgttgaaactaatt 23042894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 56 - 237
Target Start/End: Original strand, 24969049 - 24969229
Alignment:
Q  56 tcttgggttgggaaacatttgtaaacacattggatgagt-aaaatcttattgagtctcttgttcttaggaagagattaggaaaat-ggtagaaatcaggt 153  Q
    |||||||||||||||||||||||||||| |||| ||||| ||||||  ||||||  |||||||||| ||  |||||| | ||||| ||||||||| | |     
T  24969049 tcttgggttgggaaacatttgtaaacaccttgggtgagtgaaaatc--attgagagtcttgttctttgg-tgagattggaaaaatgggtagaaatta-ga 24969144  T
Q  154 tttgttcttggagagcttattgaaactaatttcttataac-cattt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
    ||||||||| | |||||| ||||| |||||||||| |||| ||||| ||||||||||| || |||| |||||||||||||||||||    
T  24969145 tttgttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatctctttgt-aagaactaattgatagtggattggaga 24969229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 78 - 224
Target Start/End: Original strand, 32091438 - 32091583
Alignment:
Q  78 aaacacattggatgagtaaaatcttattgagtctcttgttcttaggaagagattaggaaaatggtagaaatcaggttttgttcttggagagcttattgaa 177  Q
    ||||||||||| ||||  |||||  |||||||||||||||| | |||  ||||| |||||||| ||||||| |||||| |||||||||||| || |||||    
T  32091438 aaacacattgggtgagcgaaatc--attgagtctcttgttcatgggagaagattgggaaaatgctagaaattaggttt-gttcttggagagtttgttgaa 32091534  T
Q  178 actaatttcttataaccattt--tatctctttgtaaataactcattgat 224  Q
    ||||||||||| ||||  |||  |||||||||||||| ||| |||||||    
T  32091535 actaatttcttgtaactcttttgtatctctttgtaaagaacacattgat 32091583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 154 - 237
Target Start/End: Original strand, 33089911 - 33089996
Alignment:
Q  154 tttgttcttggagagcttattgaaactaatttcttataaccattt--tatctctttgtaaataactcattgatagtggattggaga 237  Q
    |||||||||||||||||| ||||| ||||||| ||||||||||||  ||||||| |||||| ||||||||||||||||||| ||||    
T  33089911 tttgttcttggagagcttgttgaagctaatttattataaccattttgtatctctctgtaaagaactcattgatagtggattagaga 33089996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 107 - 237
Target Start/End: Complemental strand, 21704018 - 21703886
Alignment:
Q  107 agtctcttgttcttaggaagagattaggaaaatggtagaaatcaggttttgttcttggagagcttattgaaactaatttcttataaccattt--tatctc 204  Q
    ||||| |||||||| ||||||||||  ||||| ||||||||| ||||||||||||| || ||||| |||||  | ||||||| || || |||  |||||     
T  21704018 agtctattgttcttgggaagagattgagaaaaaggtagaaattaggttttgttcttagaaagcttgttgaagatgatttcttgtaccctttttgtatctt 21703919  T
Q  205 tttgtaaataactcattgatagtggattggaga 237  Q
    |||||||| |||||||||| |||||||||||||    
T  21703918 tttgtaaagaactcattgacagtggattggaga 21703886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 43 - 237
Target Start/End: Complemental strand, 37229966 - 37229772
Alignment:
Q  43 tcttgaaaggttatcttgggttgggaaacatttgtaaacacattggatgagt-aaaatcttattgagtctcttgttcttaggaagagattaggaaaatgg 141  Q
    |||||| ||||| ||||||||||| |||||||||||||||| |||| ||||| ||||||  | ||||| |||||||| | ||  |||||| |||||||||    
T  37229966 tcttgagaggttctcttgggttggaaaacatttgtaaacaccttgggtgagtgaaaatc--aatgagtgtcttgttcattgg-tgagattgggaaaatgg 37229870  T
Q  142 tagaaatcaggttttgttcttggagagcttattgaaactaatttcttataaccattt---tatctctttgtaaataactcattgatagtggattggaga 237  Q
    ||||||| ||| | ||||||| | |||||| || || | ||||| || ||||| |||   ||||||||||| || |||||||| |||||||||||||||    
T  37229869 tagaaattagggtgtgttctttgtgagcttgttaaagcaaatttgttgtaaccctttttatatctctttgt-aagaactcatttatagtggattggaga 37229772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 58 - 237
Target Start/End: Complemental strand, 26175864 - 26175687
Alignment:
Q  58 ttgggttgggaaacatttgtaaacacattggatgagt-aaaatcttattgagtctcttgttcttaggaagagattaggaaaatggt-agaaatcaggttt 155  Q
    ||||||||||||||||| |||||||| |||| ||||| ||||||  ||||||| |||||||| | ||  |||||| |||||||||  |||||| ||| ||    
T  26175864 ttgggttgggaaacatt-gtaaacaccttgggtgagtgaaaatc--attgagtgtcttgttcattggt-gagattgggaaaatggggagaaattagggtt 26175769  T
Q  156 tgttcttggagagcttattgaaactaatttcttataacc-attt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
     |||||| | |||||| |||||||||||||||| ||||| |||| |||||||||||||  ||||||||||||||||||||||||    
T  26175768 -gttctttgtgagcttgttgaaactaatttcttgtaacccatttgtatctctttgtaag-aactcattgatagtggattggaga 26175687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 39 - 237
Target Start/End: Original strand, 29056278 - 29056476
Alignment:
Q  39 gttctcttgaaaggttatcttgggttgggaaacatttgtaaacacattggatgagtaaaatcttattgagtctcttgttc-ttaggaagagattaggaaa 137  Q
    |||||||||| || |||||||| ||||||||||||||| |||||| |||| |||||||||  | ||||||| | |||||| ||||  ||||||| |||||    
T  29056278 gttctcttgagagattatcttgtgttgggaaacatttggaaacaccttgggtgagtaaaaa-tcattgagtgttttgttcattag--agagattgggaaa 29056374  T
Q  138 atggtagaaatcaggttttgttcttggagagcttattgaaactaatttcttataaccattt--tatctctttgtaaataactcattgatagtggattgga 235  Q
    ||||||| ||| ||  ||||||||| | | |||| ||  ||||||||||||  || | |||  |||||||||||||  | |||||||||| |||||| ||    
T  29056375 atggtaggaattagagtttgttctttgtgtgcttgttagaactaatttcttgcaatccttttatatctctttgtaacaacctcattgataatggattaga 29056474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 122 - 226
Target Start/End: Complemental strand, 44570531 - 44570427
Alignment:
Q  122 ggaagagattaggaaaatggtagaaatcaggttttgttcttggagagcttattgaaactaatttcttataaccattt--tatctctttgtaaataactca 219  Q
    |||||||||| | |||||||||||||| | |||| ||| ||||||||||| |||||||||||||||| ||||  |||  |||||||||||||| ||||||    
T  44570531 ggaagagatt-gaaaaatggtagaaattatgttt-gttgttggagagcttgttgaaactaatttcttgtaacatttttgtatctctttgtaaagaactca 44570434  T
Q  220 ttgatag 226  Q
    |||||||    
T  44570433 ttgatag 44570427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 51 - 237
Target Start/End: Complemental strand, 52467590 - 52467405
Alignment:
Q  51 ggttatcttgggttgggaaacatttgtaaacacattggatgagt-aaaatcttattgagtctcttgttcttaggaagagattaggaaaat-ggtagaaat 148  Q
    |||| |||||||||||||||||||||||||||| |||| ||||| ||||||  ||||||| |||||||| |  |  ||| || ||||||| |||||||||    
T  52467590 ggttctcttgggttgggaaacatttgtaaacaccttgggtgagtgaaaatc--attgagtgtcttgttcatttg-tgaggttgggaaaatgggtagaaat 52467494  T
Q  149 caggttttgttcttggagagcttattgaaactaatttcttataa-ccattt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
     ||| ||||||||| | |||||| ||||| ||||| |||| ||| |||||| |||| |||||| |||||||  ||||||||||||||||||    
T  52467493 tagg-tttgttctttgtgagcttgttgaagctaatatcttgtaacccatttgtatcactttgt-aataactttttgatagtggattggaga 52467405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 56 - 237
Target Start/End: Original strand, 5429617 - 5429796
Alignment:
Q  56 tcttgggttgggaaacatttgtaaacacattggatgagt-aaaatcttattgagtctcttgttcttaggaagagattaggaaaatg-gtagaaatcaggt 153  Q
    ||||||||||||||||||| |||||||| |||| ||||| ||||||  ||||||| |||||||| | ||  |||||| |||||||| |||||||| |||     
T  5429617 tcttgggttgggaaacatt-gtaaacaccttgggtgagtgaaaatc--attgagtgtcttgttcattggt-gagattgggaaaatgagtagaaattaggg 5429712  T
Q  154 tttgttcttggagagcttattgaaactaatttcttataacc-attt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
    ||  ||||| | |||||| ||||| |||||||||| ||||| |||| ||||| |||||||  ||||||||||||||||||||||||    
T  5429713 tta-ttcttcgtgagcttgttgaagctaatttcttgtaacccatttgtatctatttgtaag-aactcattgatagtggattggaga 5429796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 62 - 237
Target Start/End: Original strand, 8665351 - 8665525
Alignment:
Q  62 gttgggaaacatttgtaaacacattggatgagtaaaatcttattgagtctcttgttcttaggaagagattaggaaaatgg-tagaaatcaggttttgttc 160  Q
    ||||||||||| |||||||||| ||||| |||| |||  | || |||| |||||||| | ||  |||| | ||||||||| ||||||| ||| || ||||    
T  8665351 gttgggaaacaattgtaaacaccttggaagagtgaaaattcat-gagtgtcttgttcattggt-gagaatgggaaaatgggtagaaattagggtt-gttc 8665447  T
Q  161 ttggagagcttattgaaactaatttcttataacc-attt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
    || |||||||| ||||| |||||||||| ||||| |||| |||||||||||||  ||||||||||||||||||||||||    
T  8665448 tttgagagcttgttgaagctaatttcttgtaacccatttgtatctctttgtaag-aactcattgatagtggattggaga 8665525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 56 - 237
Target Start/End: Complemental strand, 54200136 - 54199957
Alignment:
Q  56 tcttgggttgggaaacatttgtaaacacattggatgagt-aaaatcttattgagtctcttgttcttaggaagagattaggaaaat-ggtagaaatcaggt 153  Q
    ||||||||||||||||| ||||||||||||||| ||||| ||||||  ||||||| |||||||| | ||  |||||| ||||||| ||||||||| |||     
T  54200136 tcttgggttgggaaaca-ttgtaaacacattgggtgagtgaaaatc--attgagtgtcttgttcattgg-tgagattgggaaaatgggtagaaattagg- 54200042  T
Q  154 tttgttcttggagagcttattgaaactaatttcttataa-ccattt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
     |||||||| | || ||| ||||| |||||||||| ||| |||||| ||||||||||| || ||||||||||||||| ||| ||||    
T  54200041 gttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctctttgt-aagaactcattgatagtgaattagaga 54199957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 155 - 237
Target Start/End: Complemental strand, 27417099 - 27417016
Alignment:
Q  155 ttgttcttggagagcttattgaaactaatttcttataacc-attt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
    |||||||| | |||||| ||||| |||||||||| ||||| |||| |||||||||||||| ||||||||||||||||||||||||    
T  27417099 ttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgtaaa-aactcattgatagtggattggaga 27417016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 141 - 237
Target Start/End: Original strand, 12119559 - 12119657
Alignment:
Q  141 gtagaaatcaggttttgttcttggagagcttattgaaactaatttcttataaccatttt--atctctttgtaaataactcattgatagtggattggaga 237  Q
    |||||||| | | ||||||||| | || ||| ||||| |||||||||| ||||| ||||  ||||||||||||| |||||||| |||||||||||||||    
T  12119559 gtagaaattatggtttgttctttgtgaactttttgaagctaatttcttgtaacccttttgtatctctttgtaaagaactcatttatagtggattggaga 12119657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 56 - 237
Target Start/End: Complemental strand, 34570644 - 34570465
Alignment:
Q  56 tcttgggttgggaaacatttgtaaacacattggatgagt-aaaatcttattgagtctcttgttcttaggaagagattaggaaaat-ggtagaaatcaggt 153  Q
    ||||||||||||||||||| | |||||  |||| ||||| ||||||  ||||||| |||||||| | ||  |||||| ||||||| ||||||||| |||     
T  34570644 tcttgggttgggaaacatt-gaaaacatcttgggtgagtgaaaatc--attgagtgtcttgttcattggt-gagattgggaaaataggtagaaattaggg 34570549  T
Q  154 tttgttcttggagagcttattgaaactaatttcttataacc--attttatctctttgtaaataactcattgatagtggattggaga 237  Q
    || |||||| | || ||| ||||| |||||||||| |||||  ||| |||||||||||||  ||||||||||||||||||||||||    
T  34570548 tt-gttctttgtgaacttgttgaagctaatttcttgtaacccaattgtatctctttgtaag-aactcattgatagtggattggaga 34570465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 14 - 237
Target Start/End: Complemental strand, 36463662 - 36463440
Alignment:
Q  14 tttagggttgagtgtctttg-taaatgttctcttgaaaggttatcttgggttgggaaacatttgtaaacacattggatgagtaaaatcttattgagtctc 112  Q
    |||||| ||||| ||||||| | || ||| |||||| ||||| ||||| ||||||||||| |||||||||| |||| ||||| |||| | ||||||| ||    
T  36463662 tttaggattgagggtctttgattaaggttttcttgagaggttctcttgagttgggaaaca-ttgtaaacaccttgggtgagtgaaat-tcattgagtgtc 36463565  T
Q  113 ttgttcttaggaagagattaggaaaatgg-tagaaatcaggttttgttcttggagagcttattgaaactaatttcttataa-ccattt-tatctctttgt 209  Q
    |||||| | ||  |||||| ||||||||| ||||||| |||   ||||| | | |||||| ||||| |||||||||| ||| |||||| |||||||||||    
T  36463564 ttgttcattgg-tgagattgggaaaatggatagaaattagg-gctgttcattgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgt 36463467  T
Q  210 aaataactcattgatagtggattggaga 237  Q
     || ||||| |||| |||||||||||||    
T  36463466 -aagaactctttgacagtggattggaga 36463440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 56 - 237
Target Start/End: Complemental strand, 56178866 - 56178688
Alignment:
Q  56 tcttgggttgggaaacatttgtaaacacattggatgagt-aaaatcttattgagtctcttgttcttaggaagagattaggaaaatgg-tagaaatcaggt 153  Q
    ||||||||||||||||||| |||||||| |||| ||||| ||||||  ||||||| |||||||| | ||  |||||| |||||| || ||||||| |||     
T  56178866 tcttgggttgggaaacatt-gtaaacaccttgg-tgagtgaaaatc--attgagtgtcttgttcattggt-gagattgggaaaaagggtagaaattaggg 56178772  T
Q  154 tttgttcttggagagcttattgaaactaatttcttataaccatttt--atctctttgtaaataactcattgatagtggattggaga 237  Q
    || |||||| | || ||| ||||| |||||||||| ||||| ||||  ||||||||||||  ||||||||||||||||||||||||    
T  56178771 tt-gttctttgtgaacttgttgaagctaatttcttgtaacccttttgtatctctttgtaag-aactcattgatagtggattggaga 56178688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 126 - 237
Target Start/End: Original strand, 12073397 - 12073509
Alignment:
Q  126 gagattaggaaaatgg-tagaaatcaggttttgttcttggagagcttattgaaactaatttcttataac-cattt-tatctctttgtaaataactcattg 222  Q
    |||||| ||||||||| ||||||| |||||| |||||| | |||||| ||||| ||||||| || |||| ||||| |||||||||||||  |||||||||    
T  12073397 gagattgggaaaatgggtagaaattaggttt-gttctttgtgagcttgttgaagctaatttattgtaactcatttgtatctctttgtaag-aactcattg 12073494  T
Q  223 atagtggattggaga 237  Q
    |||||||||||||||    
T  12073495 atagtggattggaga 12073509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 237
Target Start/End: Complemental strand, 12745666 - 12745487
Alignment:
Q  56 tcttgggttgggaaacatttgtaaacacattggatgagt-aaaatcttattgagtctcttgttcttaggaagagattaggaaaatgg-tagaaatcaggt 153  Q
    |||||| |||||||||| | |||||||| |||| ||||| ||||||  ||||||| |||||||| | ||  |||||||||||||||| ||||||| |||     
T  12745666 tcttggtttgggaaacaat-gtaaacaccttgggtgagtgaaaatc--attgagtgtcttgttcattggc-gagattaggaaaatgggtagaaattaggg 12745571  T
Q  154 tttgttcttggagagcttattgaaactaatttcttataacc-attt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
    || |||||| | || ||| |  ||||||||||||| ||||| |||| |||||||||||||  ||||||||||||||||||||||||    
T  12745570 tt-gttctttgtgaacttgtcaaaactaatttcttgtaacccatttgtatctctttgtaag-aactcattgatagtggattggaga 12745487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 154 - 237
Target Start/End: Complemental strand, 22882886 - 22882801
Alignment:
Q  154 tttgttcttggagagcttattgaaactaatttcttataaccattt--tatctctttgtaaataactcattgatagtggattggaga 237  Q
    ||||||||||||||| || ||||| |||||||||| ||||| |||  |||||||| ||||| ||||||||| ||||||||| ||||    
T  22882886 tttgttcttggagagtttgttgaagctaatttcttgtaacccttttgtatctcttcgtaaagaactcattggtagtggattagaga 22882801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 154 - 237
Target Start/End: Complemental strand, 22934550 - 22934465
Alignment:
Q  154 tttgttcttggagagcttattgaaactaatttcttataaccattt--tatctctttgtaaataactcattgatagtggattggaga 237  Q
    ||||||||||||||| || ||||| |||||||||| ||||| |||  |||||||| ||||| ||||||||| ||||||||| ||||    
T  22934550 tttgttcttggagagtttgttgaagctaatttcttgtaacccttttgtatctcttcgtaaagaactcattggtagtggattagaga 22934465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 154 - 237
Target Start/End: Original strand, 33989877 - 33989962
Alignment:
Q  154 tttgttcttggagagcttattgaaactaatttcttataaccatttt--atctctttgtaaataactcattgatagtggattggaga 237  Q
    ||||||||| ||||| || ||||| |||||||||| ||| | ||||  ||||||||||||||||||| || |||||||||||||||    
T  33989877 tttgttcttagagagtttgttgaagctaatttcttgtaatccttttgtatctctttgtaaataactcgttaatagtggattggaga 33989962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 154 - 237
Target Start/End: Original strand, 34112850 - 34112935
Alignment:
Q  154 tttgttcttggagagcttattgaaactaatttcttataaccatttt--atctctttgtaaataactcattgatagtggattggaga 237  Q
    |||||||| ||||||||| ||||| |||||||| | ||||| ||||  ||||||||||||| ||||||||||||||| | ||||||    
T  34112850 tttgttctaggagagcttgttgaagctaatttcatgtaacccttttgcatctctttgtaaagaactcattgatagtgaagtggaga 34112935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 76 - 228
Target Start/End: Complemental strand, 38811399 - 38811249
Alignment:
Q  76 gtaaacacattggatgagtaaaatcttattgagtctcttgttcttaggaagagattaggaaaatggtagaaatcaggttttgttcttggagagcttattg 175  Q
    |||||||| |||| ||||| |||||  |||||||||||||||| ||| ||||||||  ||||  |||| |||| | |||| |||||||||||| || |||    
T  38811399 gtaaacaccttgggtgagtgaaatc--attgagtctcttgttcatagaaagagattgagaaatgggtacaaattaagttt-gttcttggagagtttgttg 38811303  T
Q  176 aaactaatttcttataaccattttatct-ctttgtaaataactcattgatagtg 228  Q
    ||  ||||||||  | |||||||| | | |||||||||| ||||||||||||||    
T  38811302 aatttaatttctagtgaccattttgtattctttgtaaatgactcattgatagtg 38811249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 135 - 237
Target Start/End: Original strand, 4587973 - 4588076
Alignment:
Q  135 aaaatggtagaaatcaggttttgttcttggagagcttattgaaactaatttcttataaccatttt--atctctttgtaaataactcattgatagtggatt 232  Q
    |||| ||||||||| | | ||||||||| |  ||||| ||||| |||||||||| ||||| ||||  ||||||||||||  |||||||||||||||||||    
T  4587973 aaaaaggtagaaattaagatttgttctttgtaagcttgttgaagctaatttcttgtaacccttttgtatctctttgtaag-aactcattgatagtggatt 4588071  T
Q  233 ggaga 237  Q
    |||||    
T  4588072 ggaga 4588076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 49 - 237
Target Start/End: Original strand, 31474081 - 31474268
Alignment:
Q  49 aaggttatcttgggttgggaaacatttgtaaacacattggatgagt-aaaatcttattgagtctcttgttcttaggaagagattaggaaaatgg-tagaa 146  Q
    |||||| ||||||  ||||||||||| |||||||| |||| ||||| ||||||  ||||||| |||||||| | ||  ||||||  |||||||| |||||    
T  31474081 aaggttctcttggagtgggaaacatt-gtaaacactttgggtgagtgaaaatc--attgagtgtcttgttcattggt-gagattgagaaaatgggtagaa 31474176  T
Q  147 atcaggttttgttcttggagagcttattgaaactaatttcttataac-cattt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
    || |||| ||||||||   ||| || ||||| |||||||||| |||| ||||| |||||||||||||  |||||||||||||| |||||||||    
T  31474177 attaggtcttgttctttttgagtttgttgaagctaatttcttgtaactcatttgtatctctttgtaag-aactcattgatagttgattggaga 31474268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 56 - 237
Target Start/End: Complemental strand, 47038639 - 47038462
Alignment:
Q  56 tcttgggttgggaaacatttgtaaacacattggatgagt-aaaatcttattgagtctcttgttcttaggaagagattaggaaaatgg-tagaaatcaggt 153  Q
    |||||||||||||||||||  ||||||| |||| ||||| ||||||  ||||||| |||||||| | ||  |||||| ||||||||| ||||||| |||     
T  47038639 tcttgggttgggaaacatta-taaacaccttgggtgagtgaaaatc--attgagtgtcttgttcattggt-gagatt-ggaaaatgggtagaaattaggg 47038545  T
Q  154 tttgttcttggagagcttattgaaactaatttcttataaccattt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
    || |||||| | |||||| ||||| |||||||||| ||| ||||| ||||| |||||||  | ||||||||||||||||||||||    
T  47038544 tt-gttctttgtgagcttgttgaagctaatttcttgtaatcatttgtatctgtttgtaagga-ctcattgatagtggattggaga 47038462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 237
Target Start/End: Original strand, 2209718 - 2209831
Alignment:
Q  126 gagattaggaaaatgg-tagaaatcaggttttgttcttggagagcttattgaaactaatttcttataacc-atttt--atctctttgtaaataactcatt 221  Q
    |||||| ||||||||| ||||||| ||| ||| ||||| | |||||| ||||| |||||||||| ||||| |||||  ||||||||||||  ||||||||    
T  2209718 gagattgggaaaatgggtagaaattagggttt-ttctttgtgagcttgttgaagctaatttcttgtaacccattttgtatctctttgtaag-aactcatt 2209815  T
Q  222 gatagtggattggaga 237  Q
    ||||||||||||||||    
T  2209816 gatagtggattggaga 2209831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 103 - 233
Target Start/End: Complemental strand, 35369626 - 35369500
Alignment:
Q  103 attgagtctcttgttcttaggaagagattaggaaaatggtagaaatcaggttttgttcttggagagcttattgaaactaatttcttataaccattttatc 202  Q
    ||||||| |||||||| | | |||| ||| |||||   |||||||| |||||| |||||||| ||||||  |||||||||||||||| |||   | ||||    
T  35369626 attgagtgtcttgttcattgcaagacattgggaaatgagtagaaattaggttt-gttcttggtgagcttgatgaaactaatttcttaaaac---tctatc 35369531  T
Q  203 tctttgtaaataactcattgatagtggattg 233  Q
    |||||||||| ||||||||||| ||| ||||    
T  35369530 tctttgtaaagaactcattgatggtgaattg 35369500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 155 - 237
Target Start/End: Original strand, 40632479 - 40632562
Alignment:
Q  155 ttgttcttggagagcttattgaaactaatttcttataacc-attt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
    |||||||| | |||||| ||||| |||||||||| ||||| |||| |||||||||||||  ||||||||||||||||||||||||    
T  40632479 ttgttctttgtgagcttgttgaagctaatttcttgtaacctatttgtatctctttgtaag-aactcattgatagtggattggaga 40632562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 225
Target Start/End: Complemental strand, 48142614 - 48142440
Alignment:
Q  51 ggttatcttgggttgggaaacatttgtaaacacattggatgagt-aaaatcttattgagtctcttgttcttaggaagagattaggaaaatggtagaaatc 149  Q
    |||| ||||| |||||||||||||| ||||||| | || ||||| ||||||  ||||||| |||||  | | | | |||||| |||| ||| |||||||     
T  48142614 ggttctcttgagttgggaaacatttttaaacacttcgggtgagtgaaaatc--attgagtgtcttgcccattg-atgagattgggaacatgatagaaatt 48142518  T
Q  150 aggttttgttcttggagagcttattgaaactaatttcttataaccattttat--ctctttgtaaataactcattgata 225  Q
    ||| ||||||||| | |||||| ||||| ||| |||||| ||||| || |||  ||||||||||| ||||||||||||    
T  48142517 agggtttgttctttgtgagcttgttgaagctagtttcttgtaacccttgtatatctctttgtaaagaactcattgata 48142440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 126 - 237
Target Start/End: Complemental strand, 9927621 - 9927509
Alignment:
Q  126 gagattaggaaaatgg-tagaaatcaggttttgttcttggagagcttattgaaactaatttcttataacc-attt-tatctctttgtaaataactcattg 222  Q
    |||||| ||||||||| ||||||| ||| || |||||| | || ||| ||||| |||||||||| ||||| |||| |||||||||||||  |||||||||    
T  9927621 gagattgggaaaatgggtagaaattagggtt-gttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctctttgtaag-aactcattg 9927524  T
Q  223 atagtggattggaga 237  Q
    |||||||||||||||    
T  9927523 atagtggattggaga 9927509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 154 - 237
Target Start/End: Complemental strand, 26699578 - 26699493
Alignment:
Q  154 tttgttcttggagagcttattgaaactaatttcttataaccatttt--atctctttgtaaataactcattgatagtggattggaga 237  Q
    ||||||||| | |||||| ||||| |||||||||| ||||  ||||  ||||||||||||| |||||||| ||| |||||||||||    
T  26699578 tttgttctttgtgagcttgttgaagctaatttcttgtaactcttttgtatctctttgtaaagaactcatttataatggattggaga 26699493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 237
Target Start/End: Complemental strand, 50673970 - 50673898
Alignment:
Q  166 gagcttattgaaactaatttcttataac-cattt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
    |||||| ||||| |||||||||| |||| ||||| |||||||||||||  ||||||||||||||||||||||||    
T  50673970 gagcttgttgaagctaatttcttgtaactcatttgtatctctttgtaag-aactcattgatagtggattggaga 50673898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 236
Target Start/End: Original strand, 54883025 - 54883136
Alignment:
Q  126 gagattaggaaaatgg-tagaaatcaggttttgttcttggagagcttattgaaactaatttcttataacc-attt-tatctctttgtaaataactcattg 222  Q
    |||||| ||||||||| ||||||| ||| || ||| || | |||||| ||||| |||||||||| ||||| |||| |||||||||||||  |||||||||    
T  54883025 gagattgggaaaatgggtagaaattagggtt-gttttttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgtaag-aactcattg 54883122  T
Q  223 atagtggattggag 236  Q
    ||||||||||||||    
T  54883123 atagtggattggag 54883136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 237
Target Start/End: Original strand, 6655990 - 6656073
Alignment:
Q  155 ttgttcttggagagcttattgaaactaatttcttataac-cattt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
    |||||||| | || ||| ||||| |||||||||| |||| ||||| |||||||||||||  ||||||||||||||||||||||||    
T  6655990 ttgttctttgtgaacttgttgaagctaatttcttgtaactcatttgtatctctttgtaag-aactcattgatagtggattggaga 6656073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 237
Target Start/End: Original strand, 36994558 - 36994641
Alignment:
Q  155 ttgttcttggagagcttattgaaactaatttcttataacc-attt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
    |||||||| | |||||| ||||| |||||||||| ||||| |||| |||| ||||||||  ||||||||||||||||||||||||    
T  36994558 ttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatccctttgtaag-aactcattgatagtggattggaga 36994641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 237
Target Start/End: Original strand, 37740659 - 37740742
Alignment:
Q  155 ttgttcttggagagcttattgaaactaatttcttataacc-attt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
    |||||||| | || ||| ||||| |||||||||| ||||| |||| |||||||||||||  ||||||||||||||||||||||||    
T  37740659 ttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctctttgtaag-aactcattgatagtggattggaga 37740742  T

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Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 237
Target Start/End: Complemental strand, 50262835 - 50262752
Alignment:
Q  155 ttgttcttggagagcttattgaaactaatttcttataacc-attt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
    |||||||| | |||||| ||||| |||||||||| ||||| |||| |||||||||||||  |||||||||||||| |||||||||    
T  50262835 ttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgtaag-aactcattgatagttgattggaga 50262752  T

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Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 237
Target Start/End: Original strand, 379400 - 379497
Alignment:
Q  140 ggtagaaatcaggttttgttcttggagagcttattgaaactaatttcttataacc-attt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
    ||||||||| |||||| |||||| | |||||| ||||| |||||||||| ||||| |||| |||| ||||||||  |||| |||||||||||||||||||    
T  379400 ggtagaaattaggttt-gttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatcgctttgtaag-aactaattgatagtggattggaga 379497  T

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Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 125 - 233
Target Start/End: Original strand, 53345221 - 53345331
Alignment:
Q  125 agagattaggaaaatggtagaaatcaggttttgttcttggagagcttattgaaactaatttcttataaccattt--tatctctttgtaaataactcattg 222  Q
    |||||||  ||||||| ||||||| | | ||  ||||| | |||||| |||||||||||||||| ||||| |||  ||||| |||||||| ||||||||     
T  53345221 agagattgagaaaatgatagaaattaaggttgattctttgtgagcttgttgaaactaatttcttgtaacccttttatatctttttgtaaagaactcatta 53345320  T
Q  223 atagtggattg 233  Q
    ||| |||||||    
T  53345321 atattggattg 53345331  T

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Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 237
Target Start/End: Original strand, 8648191 - 8648256
Alignment:
Q  173 ttgaaactaatttcttataacc-attt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
    ||||| |||||||||||||||| |||| |||||||||||||  |||||||||||| |||||||||||    
T  8648191 ttgaagctaatttcttataacccatttgtatctctttgtaag-aactcattgatattggattggaga 8648256  T

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Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 237
Target Start/End: Original strand, 26364241 - 26364353
Alignment:
Q  126 gagattaggaaaatgg-tagaaatcaggttttgttcttggagagcttattgaaactaatttcttataac-cattt-tatctctttgtaaataactcattg 222  Q
    |||||| ||||||||| ||||||| ||| || |||||| | || ||| ||||| |||||||||| |||| ||||| |||||||||||||  ||||||||     
T  26364241 gagattgggaaaatgggtagaaattagggtt-gttctttgtgaacttgttgaagctaatttcttgtaactcatttgtatctctttgtaag-aactcatta 26364338  T
Q  223 atagtggattggaga 237  Q
    |||||||||||||||    
T  26364339 atagtggattggaga 26364353  T

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Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 237
Target Start/End: Original strand, 35662493 - 35662558
Alignment:
Q  173 ttgaaactaatttcttataac-cattt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
    ||||| |||||||||| |||| ||||| |||||||||||||  ||||||||||||||||||||||||    
T  35662493 ttgaagctaatttcttgtaactcatttgtatctctttgtaag-aactcattgatagtggattggaga 35662558  T

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Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 237
Target Start/End: Complemental strand, 52095592 - 52095413
Alignment:
Q  56 tcttgggttgggaaacatttgtaaacacattggatgagt-aaaatcttattgagtctcttgttcttaggaagagattaggaaaat-ggtagaaatcaggt 153  Q
    ||||||||||||||||| |||||||||| |||| ||||| ||||||  ||||||| |||||||| | ||  |||||| ||||||| ||||||||| |||     
T  52095592 tcttgggttgggaaaca-ttgtaaacaccttgggtgagtgaaaatc--attgagtgtcttgttcattgg-tgagattgggaaaatgggtagaaattagg- 52095498  T
Q  154 tttgttcttggagagcttattgaaactaatttcttataa-ccattt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
     |||||||| | || ||| |  || |||||||||| ||| |||||| ||||||||||| || || || ||||||||||||||||||    
T  52095497 gttgttctttgtgaacttgtcaaagctaatttcttgtaacccatttgtatctctttgt-aagaaatctttgatagtggattggaga 52095413  T

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Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 237
Target Start/End: Complemental strand, 46147514 - 46147442
Alignment:
Q  166 gagcttattgaaactaatttcttataac-cattt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
    |||||| ||||| |||||||||| |||| ||||| |||||||||||||  ||||| ||||||||||||||||||    
T  46147514 gagcttgttgaagctaatttcttgtaactcatttgtatctctttgtaag-aactctttgatagtggattggaga 46147442  T

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Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 237
Target Start/End: Complemental strand, 48893761 - 48893689
Alignment:
Q  166 gagcttattgaaactaatttcttataac-cattt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
    |||||| ||||| |||||||||| |||| ||||| |||||||||||||  ||||| ||||||||||||||||||    
T  48893761 gagcttgttgaagctaatttcttgtaactcatttgtatctctttgtaag-aactctttgatagtggattggaga 48893689  T

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Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 237
Target Start/End: Original strand, 52065534 - 52065715
Alignment:
Q  56 tcttgggttgggaaacatttgtaaacacattggatgagt-aaaatcttattgagtctcttgttcttaggaagagattaggaaaatggtagaaatcaggtt 154  Q
    ||||||||||||||||| |||| ||| | |||| ||||| ||||||  || |||||||||| ||   |||||| ||| |||||  ||||||||| |||      
T  52065534 tcttgggttgggaaacaattgtgaaccccttgggtgagtgaaaatc--atcgagtctcttgatcaacggaagatattgggaaacaggtagaaattagg-- 52065629  T
Q  155 ttgttcttggagagcttattgaaactaatttcttataacc---attttatctctttgtaaataactcattgatagtggattggaga 237  Q
    |||||||| |||||||||||||| ||| |||  | |||||    || ||||||||||| |  ||||||||||||||| | ||||||    
T  52065630 ttgttcttagagagcttattgaagctatttttctgtaaccccttttgtatctctttgttagaaactcattgatagtgaagtggaga 52065715  T

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Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 237
Target Start/End: Complemental strand, 12744035 - 12743976
Alignment:
Q  179 ctaatttcttataacc-attt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
    |||||||||| ||||| |||| |||||||||||||  ||||||||||||||||||||||||    
T  12744035 ctaatttcttgtaacccatttgtatctctttgtaag-aactcattgatagtggattggaga 12743976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 237
Target Start/End: Complemental strand, 12744157 - 12744098
Alignment:
Q  179 ctaatttcttataacc-attt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
    |||||||||| ||||| |||| |||||||||||||  ||||||||||||||||||||||||    
T  12744157 ctaatttcttgtaacccatttgtatctctttgtaag-aactcattgatagtggattggaga 12744098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 237
Target Start/End: Complemental strand, 12745424 - 12745365
Alignment:
Q  179 ctaatttcttataacc-attt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
    |||||||||| ||||| |||| |||||||||||||  ||||||||||||||||||||||||    
T  12745424 ctaatttcttgtaacccatttgtatctctttgtaag-aactcattgatagtggattggaga 12745365  T

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Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 227
Target Start/End: Original strand, 19222387 - 19222415
Alignment:
Q  199 tatctctttgtaaataactcattgatagt 227  Q
    |||||||||||||||||||||||||||||    
T  19222387 tatctctttgtaaataactcattgatagt 19222415  T

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Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 189
Target Start/End: Complemental strand, 35370535 - 35370448
Alignment:
Q  101 ttattgagtctcttgttcttaggaagagattaggaaaatggtagaaatcaggttttgttcttggagagcttattgaaactaatttctta 189  Q
    ||||||||| |||||||| | | |||| ||| |||||   |||||||| |||||| |||||||| ||||||  ||||||||||||||||    
T  35370535 ttattgagtgtcttgttcattgcaagacattgggaaatgagtagaaattaggttt-gttcttggtgagcttgatgaaactaatttctta 35370448  T

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Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 237
Target Start/End: Original strand, 46703505 - 46703618
Alignment:
Q  126 gagattaggaaaatg-gtagaaatcaggttttgttcttggagagcttattgaaactaatttcttataacc-atttt--atctctttgtaaataactcatt 221  Q
    |||||| |||||||| |||||||| ||| || |||||| | |||||| || || |||||||||| ||||| |||||  ||||||||||||  ||||||||    
T  46703505 gagattgggaaaatgagtagaaattagggtt-gttctttgtgagcttgtttaagctaatttcttgtaacccattttgtatctctttgtaag-aactcatt 46703602  T
Q  222 gatagtggattggaga 237  Q
     |||||||||||||||    
T  46703603 tatagtggattggaga 46703618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 77; Significance: 7e-36; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 39 - 233
Target Start/End: Original strand, 13121689 - 13121880
Alignment:
Q  39 gttctcttgaaaggttatcttgggttgggaaacatttgtaaacacattggatgagt-aaaatcttattgagtctcttgttcttaggaagagattaggaaa 137  Q
    |||||||||| || || ||||||||||||||||||||||||||||||||| ||||| ||||||  ||||||| |||||||| | ||  |||| | |||||    
T  13121689 gttctcttgagagcttctcttgggttgggaaacatttgtaaacacattgggtgagtgaaaatc--attgagtgtcttgttcattgg-tgagactgggaaa 13121785  T
Q  138 atggtagaaatcaggttttgttcttggagagcttattgaaactaatttcttataaccattttatctctttgtaaataactcattgatagtggattg 233  Q
    ||||||||||| ||| ||||||||| | |||||| |||||  ||||||||| ||||| || |||||||||||| | ||||||||||||||||||||    
T  13121786 atggtagaaattagggtttgttctttgtgagcttgttgaagataatttcttgtaacctttgtatctctttgtaga-aactcattgatagtggattg 13121880  T

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Target: chr2; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 58 - 159
Target Start/End: Original strand, 28671869 - 28671968
Alignment:
Q  58 ttgggttgggaaacatttgtaaacacattggatgagtaaaatcttattgagtctcttgttcttaggaagagattaggaaaatggtagaaatcaggttttg 157  Q
    |||||||||||||||||||||||  |||||||||||| ||||  ||||||||||||||||||| |||||| ||| | ||||| |||||||| ||||||||    
T  28671869 ttgggttgggaaacatttgtaaatgcattggatgagtgaaat--tattgagtctcttgttcttgggaagatattggaaaaattgtagaaattaggttttg 28671966  T

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Target: chr2; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 154 - 229
Target Start/End: Complemental strand, 30218180 - 30218103
Alignment:
Q  154 tttgttcttggagagcttattgaaactaatttcttataaccattt--tatctctttgtaaataactcattgatagtgg 229  Q
    |||||||||||||||||||||||| |||||||||| |||||||||  ||||||||||||||||| |||||||||||||    
T  30218180 tttgttcttggagagcttattgaagctaatttcttgtaaccattttgtatctctttgtaaataattcattgatagtgg 30218103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 39 - 233
Target Start/End: Original strand, 11049470 - 11049667
Alignment:
Q  39 gttctcttgaaaggttatcttgggttgggaaacatttgtaaacacattggatgagt-aaaatcttattgagtctcttgttcttaggaagagattaggaaa 137  Q
    ||||| |||| || || ||||| |||||||||||||||||||||| |||| | ||| ||||||  ||||||| ||||||| || ||  ||||||||||||    
T  11049470 gttcttttgagagcttctcttgtgttgggaaacatttgtaaacaccttgggtaagtgaaaatc--attgagtgtcttgttttttgg-tgagattaggaaa 11049566  T
Q  138 atggtagaaatcaggttttgttc---ttggagagcttattgaaactaatttcttataaccattt---tatctctttgtaaataactcattgatagtggat 231  Q
    |||||| |||| ||| |||||||   || | |||||| ||||| |||||||||||||||| |||   ||||||||||| || |||||||||||||| |||    
T  11049567 atggtataaattagggtttgttctaatttgtgagcttgttgaagctaatttcttataacccttttagtatctctttgt-aagaactcattgatagtagat 11049665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 52 - 237
Target Start/End: Complemental strand, 36318243 - 36318060
Alignment:
Q  52 gttatcttgggttgggaaacatttgtaaacacattggatgagt-aaaatcttattgagtctcttgttcttaggaagagattaggaaaatgg-tagaaatc 149  Q
    ||||||||||||||||||| ||| |||||||| |||| ||||| ||||||  ||||||| |||||||| | ||  |||||| | ||||||| |||||||     
T  36318243 gttatcttgggttgggaaatatt-gtaaacaccttgggtgagtgaaaatc--attgagtgtcttgttcattggt-gagattggaaaaatgggtagaaatt 36318148  T
Q  150 aggttttgttcttggagagcttattgaaactaatttcttataacc-attt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
    ||| || |||||| | |||||| ||||||||||||| || ||||| |||| |||||||||||||  ||||||||||||||||||||||||    
T  36318147 agggtt-gttctttgtgagcttgttgaaactaatttattgtaacccatttgtatctctttgtaag-aactcattgatagtggattggaga 36318060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 14 - 237
Target Start/End: Original strand, 36773457 - 36773679
Alignment:
Q  14 tttagggttgagtgtctttg-taaatgttctcttgaaaggttatcttgggttgggaaacatttgtaaacacattggatgagt-aaaatcttattgagtct 111  Q
    |||||||||||| ||||||| | |  ||||||||||  |||| ||||||||||||||||||| |||||||| |||| ||||| ||||||  ||||||| |    
T  36773457 tttagggttgagggtctttgattagggttctcttgaggggttctcttgggttgggaaacatt-gtaaacaccttgggtgagtgaaaatc--attgagtgt 36773553  T
Q  112 cttgttcttaggaagagattaggaaaatggtag-aaatcaggttttgttcttggagagcttattgaaactaatttcttataac-cattt-tatctctttg 208  Q
    ||||||| | ||  |||||| ||||||||| |  |||| ||| || |||||| | |||||| ||||| |||||||||| |||| ||||| ||||||||||    
T  36773554 cttgttcattggt-gagattgggaaaatgggaataaattagggtt-gttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatctctttg 36773651  T
Q  209 taaataactcattgatagtggattggaga 237  Q
    |||  ||||| ||||||||||||||||||    
T  36773652 taag-aactctttgatagtggattggaga 36773679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 154 - 237
Target Start/End: Original strand, 24398090 - 24398175
Alignment:
Q  154 tttgttcttggagagcttattgaaactaatttcttataaccatttt--atctctttgtaaataactcattgatagtggattggaga 237  Q
    ||||||||| | |||||| ||||| |||||||||| ||||| ||||  ||||||||||||| |||||||||||| |||||||||||    
T  24398090 tttgttctttgtgagcttgttgaagctaatttcttgtaacccttttgtatctctttgtaaagaactcattgataatggattggaga 24398175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 134 - 237
Target Start/End: Original strand, 33648184 - 33648289
Alignment:
Q  134 gaaaatggtagaaatcaggttttgttcttggagagcttattgaaactaatttcttataaccatttt--atctctttgtaaataactcattgatagtggat 231  Q
    |||||||||| |||| ||| ||||||||| | |||||| ||||| |||||||| | ||||| ||||  || |||||||||| ||||||||||||| ||||    
T  33648184 gaaaatggtaaaaattagggtttgttctttgtgagcttgttgaagctaatttcctgtaacccttttgtatttctttgtaaagaactcattgatagcggat 33648283  T
Q  232 tggaga 237  Q
    ||||||    
T  33648284 tggaga 33648289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 56 - 237
Target Start/End: Original strand, 42362290 - 42362469
Alignment:
Q  56 tcttgggttgggaaacatttgtaaacacattggatgagt-aaaatcttattgagtctcttgttcttaggaagagattaggaaaatgg-tagaaatcaggt 153  Q
    ||||||||||||||||||| |||||||| |||| ||||| ||||||  ||||||| |||||||| |  |  |||||| ||||||||| ||||||| ||||    
T  42362290 tcttgggttgggaaacatt-gtaaacaccttgggtgagtgaaaatc--attgagtgtcttgttcatttgt-gagattgggaaaatgggtagaaattaggt 42362385  T
Q  154 tttgttcttggagagcttattgaaactaatttcttataacc-attt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
    || |||||| | |||||| || || |||||||||| ||||| |||| |||| ||||||||  ||||||||||||||||||||||||    
T  42362386 tt-gttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatccctttgtaag-aactcattgatagtggattggaga 42362469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 237
Target Start/End: Original strand, 38312178 - 38312357
Alignment:
Q  56 tcttgggttgggaaacatttgtaaacacattggatgagt-aaaatcttattgagtctcttgttcttaggaagagattaggaaaatgg-tagaaatcaggt 153  Q
    ||||||||||||||||||| ||| |||| |||  ||||| ||||||  ||||||| |||||||| | ||  |||||| ||||||||| ||||||| |||     
T  38312178 tcttgggttgggaaacatt-gtatacaccttgtgtgagtgaaaatc--attgagtgtcttgttcattggt-gagattgggaaaatgggtagaaattaggg 38312273  T
Q  154 tttgttcttggagagcttattgaaactaatttcttataacc-attt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
    || |||||| | || ||| |||||||||||||||| ||||| |||| |||||||||||||  | ||||||||||||||||||||||    
T  38312274 tt-gttctttgtgaacttgttgaaactaatttcttgtaacccatttgtatctctttgtaag-atctcattgatagtggattggaga 38312357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 103 - 228
Target Start/End: Complemental strand, 42261674 - 42261545
Alignment:
Q  103 attgagtctcttgttctt---aggaagagattaggaaaatggtagaaatcaggttttgttcttggagagcttattgaaactaatttcttataaccattt- 198  Q
    |||||||||||||||| |   |||| ||||||  |||||| |||||||| | |||| ||||||||||||||| ||||| |||||||||| ||||  |||     
T  42261674 attgagtctcttgttcatgaaaggaggagattgagaaaatcgtagaaattaagttt-gttcttggagagcttgttgaagctaatttcttgtaactctttt 42261576  T
Q  199 -tatctctttgtaaataactcattgatagtg 228  Q
     ||| ||||||||||  ||||||||||||||    
T  42261575 gtatatctttgtaaagtactcattgatagtg 42261545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 155 - 237
Target Start/End: Original strand, 45726963 - 45727046
Alignment:
Q  155 ttgttcttggagagcttattgaaactaatttcttataacc-attt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
    |||||||| | |||||| ||||| |||||||||| ||||| |||| |||||||||||||  ||||||||||||||||||||||||    
T  45726963 ttgttctttgtgagcttgttgaagctaatttcttgtaacctatttgtatctctttgtaag-aactcattgatagtggattggaga 45727046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 56 - 237
Target Start/End: Complemental strand, 2334647 - 2334469
Alignment:
Q  56 tcttgggttgggaaacatttgtaaacacattggatgagt-aaaatcttattgagtctcttgttcttaggaagagattaggaaaatgg-tagaaatcaggt 153  Q
    ||||||||||||||||||| |||||||| |||| ||||| ||||||  ||||||| |||||||| | ||  |||||| ||||||||| ||||||| |||     
T  2334647 tcttgggttgggaaacatt-gtaaacaccttgg-tgagtgaaaatc--attgagtgtcttgttcattggt-gagattgggaaaatgggtagaaataaggg 2334553  T
Q  154 tttgttcttggagagcttattgaaactaatttcttataaccatttt--atctctttgtaaataactcattgatagtggattggaga 237  Q
    || |||||| | || ||| ||||| |||||||||  ||||  ||||  ||||||||||||  ||||||||||||||||||||||||    
T  2334552 tt-gttctttgtgaacttgttgaagctaatttctagtaactcttttgtatctctttgtaag-aactcattgatagtggattggaga 2334469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 56 - 237
Target Start/End: Complemental strand, 5723484 - 5723307
Alignment:
Q  56 tcttgggttgggaaacatttgtaaacacattggatgagt-aaaatcttattgagtctcttgttcttaggaagagattaggaaaatggtagaaatcaggtt 154  Q
    ||||||||||||||||||| |||||||| |||| ||||| ||||||  ||||||| |||||||| | ||  ||||||  ||||| ||||||||| ||| |    
T  5723484 tcttgggttgggaaacatt-gtaaacaccttgg-tgagtgaaaatc--attgagtgtcttgttcattggt-gagattgagaaaagggtagaaattaggct 5723390  T
Q  155 ttgttcttggagagcttattgaaactaatttcttataaccatttt--atctctttgtaaataactcattgatagtggattggaga 237  Q
    | |||||| | || ||| |  || |||||||||| ||||| ||||  ||||||||||||  ||||||||||||||||||||||||    
T  5723389 t-gttctttgtgaacttgtcaaagctaatttcttgtaacctttttgtatctctttgtaag-aactcattgatagtggattggaga 5723307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 56 - 237
Target Start/End: Complemental strand, 11151821 - 11151642
Alignment:
Q  56 tcttgggttgggaaacatttgtaaacacattggatgagt-aaaatcttattgagtctcttgttcttaggaagagattaggaaaat-ggtagaaatcaggt 153  Q
    ||||||||||||||||| |||||||||| |||| ||||| ||||||  |||||||||||||||| | ||  || ||| ||||||| ||||||||| | |     
T  11151821 tcttgggttgggaaaca-ttgtaaacaccttgggtgagtgaaaatc--attgagtctcttgttcattgg-tgaaattgggaaaatgggtagaaatta-ga 11151727  T
Q  154 tttgttcttggagagcttattgaaactaatttcttataa-ccattt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
    ||||||||| | |||||| || || |||||||||| ||| |||||| |||| |||||| || ||||| | ||||||||||||||||    
T  11151726 tttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatcactttgt-aagaactcttagatagtggattggaga 11151642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 56 - 237
Target Start/End: Complemental strand, 17057599 - 17057420
Alignment:
Q  56 tcttgggttgggaaacatttgtaaacacattggatgagt-aaaatcttattgagtctcttgttcttaggaagagattaggaaaatgg-tagaaatcaggt 153  Q
    ||||||||||||||| ||| |||||||| |||| ||||| ||||||  ||||||| |||||||| | ||  |||||| | ||||||| ||||||| |||     
T  17057599 tcttgggttgggaaatatt-gtaaacaccttgggtgagtgaaaatc--attgagtgtcttgttcattggt-gagattggaaaaatgggtagaaattaggg 17057504  T
Q  154 tttgttcttggagagcttattgaaactaatttcttataac-cattt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
    || |||||| |  ||||| ||||| ||||||| || |||| ||||| |||||||||||||  ||||||||||||||||||||||||    
T  17057503 tt-gttctttgcaagcttgttgaagctaattttttgtaactcatttgtatctctttgtaag-aactcattgatagtggattggaga 17057420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 56 - 237
Target Start/End: Complemental strand, 17085582 - 17085403
Alignment:
Q  56 tcttgggttgggaaacatttgtaaacacattggatgagt-aaaatcttattgagtctcttgttcttaggaagagattaggaaaatgg-tagaaatcaggt 153  Q
    ||||||||||||||| ||| |||||||| |||| ||||| ||||||  ||||||| |||||||| | ||  |||||| | ||||||| ||||||| |||     
T  17085582 tcttgggttgggaaatatt-gtaaacaccttgggtgagtgaaaatc--attgagtgtcttgttcattggt-gagattggaaaaatgggtagaaattaggg 17085487  T
Q  154 tttgttcttggagagcttattgaaactaatttcttataac-cattt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
    || |||||| |  ||||| ||||| ||||||| || |||| ||||| |||||||||||||  ||||||||||||||||||||||||    
T  17085486 tt-gttctttgcaagcttgttgaagctaattttttgtaactcatttgtatctctttgtaag-aactcattgatagtggattggaga 17085403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 56 - 237
Target Start/End: Original strand, 29867807 - 29867986
Alignment:
Q  56 tcttgggttgggaaacatttgtaaacacattggatgagt-aaaatcttattgagtctcttgttcttaggaagagattaggaaaatgg-tagaaatcaggt 153  Q
    ||||||||||||||||||| |||||||| |||| ||||| ||||||  ||||||| |||||||| | ||  |||||| ||||||||| ||||||| |||     
T  29867807 tcttgggttgggaaacatt-gtaaacaccttgggtgagtgaaaatc--attgagtgtcttgttcattggt-gagattgggaaaatgggtagaaattaggg 29867902  T
Q  154 tttgttcttggagagcttattgaaactaatttcttataacc-attt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
    || |||||| | || ||| |  || |||||||||| ||||| |||| |||||||||||||  ||||| ||||||||||||||||||    
T  29867903 tt-gttctttgtgaacttgtcaaagctaatttcttgtaacccatttgtatctctttgtaag-aactctttgatagtggattggaga 29867986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 135 - 237
Target Start/End: Complemental strand, 6595159 - 6595057
Alignment:
Q  135 aaaatggtagaaatcaggttttgttcttggagagcttattgaaactaatttcttataaccatttt--atctctttgtaaataactcattgatagtggatt 232  Q
    |||||||||||||| ||| || |||||| | || ||| ||||| |||||||||| ||||| ||||  ||||||||||||  ||||| |||||||||||||    
T  6595159 aaaatggtagaaattagggtt-gttctttgtgaacttgttgaagctaatttcttgtaacccttttgaatctctttgtaag-aactcgttgatagtggatt 6595062  T
Q  233 ggaga 237  Q
    |||||    
T  6595061 ggaga 6595057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 237
Target Start/End: Complemental strand, 723972 - 723795
Alignment:
Q  58 ttgggttgggaaacatttgtaaacacattggatgagt-aaaatcttattgagtctcttgttcttaggaagagattaggaaaatgg-tagaaatcaggttt 155  Q
    ||||||||||||||||| |||||||| |||| ||||| ||||||  ||||||| |||||||| |  |  |||||| | ||| ||| ||||||| ||||||    
T  723972 ttgggttgggaaacatt-gtaaacaccttgggtgagtgaaaatc--attgagtgtcttgttcatttgt-gagattggaaaactgggtagaaattaggttt 723877  T
Q  156 tgttcttggagagcttattgaaactaatttcttataacc-attt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
     |||||| | |||||| || || |||||||||| ||||| |||| |||| ||||||||  ||||||||||||||||||||||||    
T  723876 -gttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatccctttgtaag-aactcattgatagtggattggaga 723795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 237
Target Start/End: Complemental strand, 1631866 - 1631783
Alignment:
Q  155 ttgttcttggagagcttattgaaactaatttcttataacc-attt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
    |||||||| | |||||| ||||| ||||| |||| ||||| |||| |||||||||||||  ||||||||||||||||||||||||    
T  1631866 ttgttctttgtgagcttgttgaagctaatatcttgtaacccatttgtatctctttgtaag-aactcattgatagtggattggaga 1631783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 237
Target Start/End: Complemental strand, 35447018 - 35446935
Alignment:
Q  155 ttgttcttggagagcttattgaaactaatttcttataacc-attt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
    |||||||| | || ||| ||||| |||||||||| ||||| |||| |||||||||||||  ||||||||||||||||||||||||    
T  35447018 ttgttctttgtgatcttgttgaatctaatttcttgtaacccatttgtatctctttgtaag-aactcattgatagtggattggaga 35446935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 237
Target Start/End: Complemental strand, 33162610 - 33162501
Alignment:
Q  129 attaggaaaatgg-tagaaatcaggttttgttcttggagagcttattgaaactaatttcttataacc-attt-tatctctttgtaaataactcattgata 225  Q
    ||||||||||||| ||||||| ||| || |||||| | |||||| ||||| |||||||||| ||||| |||| ||||||| |||||  ||||||||||||    
T  33162610 attaggaaaatgggtagaaattagggtt-gttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctctgtaag-aactcattgata 33162513  T
Q  226 gtggattggaga 237  Q
    ||||||| ||||    
T  33162512 gtggattagaga 33162501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 49 - 237
Target Start/End: Complemental strand, 42020110 - 42019921
Alignment:
Q  49 aaggttatcttgggttgggaaacatttgtaaacacattggatgagtaaaatcttattgagtctcttgttcttaggaagagattaggaaaatggtagaaat 148  Q
    |||||| ||||| ||||  ||| |||||||||||   ||| ||||| |||||  ||||||||| || ||||| |||||||||||| |||| ||||||| |    
T  42020110 aaggttctcttgagttgataaatatttgtaaacatcgtgggtgagtgaaatc--attgagtctatttttcttgggaagagattagaaaaagggtagaatt 42020013  T
Q  149 caggttttgttcttggagagcttattgaaactaatttcttataaccattt--tatctctttgt--aaataactcattgatagtggattggaga 237  Q
     | | |||||||||  | ||||| | ||| |||||||||| ||||  |||  |||||||||||  ||| ||||||||||||||| ||| ||||    
T  42020012 tatg-tttgttcttataaagcttgtagaagctaatttcttgtaactcttttgtatctctttgtaaaaaaaactcattgatagtgaatttgaga 42019921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 237
Target Start/End: Complemental strand, 4503362 - 4503184
Alignment:
Q  56 tcttgggttgggaaacatttgtaaacacattggatgagt-aaaatcttattgagtctcttgttcttaggaagagattaggaaaa--tggtagaaatcagg 152  Q
    ||||||||||||||||||| |||||||| |||| ||||| ||||||  ||||||| |||||||| | ||| |||||| ||||||  |||||||||| |||    
T  4503362 tcttgggttgggaaacatt-gtaaacaccttgg-tgagtgaaaatc--attgagtgtcttgttcattgga-gagattgggaaaaaatggtagaaattagg 4503268  T
Q  153 ttttgttcttggagagcttattgaaactaatttcttataaccattttatctctttgtaaataactcattgatagtggattggaga 237  Q
     || |||||| | || ||| |  || |||||||||| ||||  |||| | ||| | | || ||||||||||||||||||||||||    
T  4503267 gtt-gttctttgtgaacttgtcaaagctaatttcttgtaactcttttgtatctctttgaagaactcattgatagtggattggaga 4503184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 237
Target Start/End: Original strand, 24197909 - 24198014
Alignment:
Q  133 ggaaaatggtagaaatcaggttttgttcttggagagcttattgaaa-ctaatttcttataaccattttatctctttgtaaataactcattgatagtggat 231  Q
    |||||| ||||||||| |   ||| |||||||||| ||| |||||  |||||||||| ||||| || |||||||||| ||  ||||| |||||| |||||    
T  24197909 ggaaaagggtagaaattaaagttttttcttggagaacttgttgaaggctaatttcttgtaacccttgtatctctttgcaagaaactctttgataatggat 24198008  T
Q  232 tggaga 237  Q
    ||||||    
T  24198009 tggaga 24198014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 237
Target Start/End: Complemental strand, 36988189 - 36988127
Alignment:
Q  176 aaactaatttcttataaccatttt--atctctttgtaaataactcattgatagtggattggaga 237  Q
    ||||||||||||| ||||  ||||  ||||||||||||  ||||||||||||||||||||||||    
T  36988189 aaactaatttcttgtaactcttttgtatctctttgtaag-aactcattgatagtggattggaga 36988127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 90
Target Start/End: Complemental strand, 40015193 - 40015154
Alignment:
Q  50 aggttatcttgggttgggaaacatttgtaaacacattggat 90  Q
    ||||| ||||||||||||||||| |||||||||||||||||    
T  40015193 aggttctcttgggttgggaaaca-ttgtaaacacattggat 40015154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 76; Significance: 3e-35; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 39 - 237
Target Start/End: Original strand, 7597535 - 7597732
Alignment:
Q  39 gttctcttgaaaggttatcttgggttgggaaacatttgtaaacacattggatgagtaaaatcttattgagtctcttgttcttaggaagagattaggaaaa 138  Q
    |||||||||| || || |||||| |||||||||||||||||| || |||  ||||| ||   | ||||||||| |||||||| |||||||||| | ||||    
T  7597535 gttctcttgagagtttctcttggattgggaaacatttgtaaataccttgagtgagtgaa---tcattgagtcttttgttcttgggaagagattggaaaaa 7597631  T
Q  139 tggtagaaatcaggttttgttcttggagagcttattgaaactaatttcttataaccattt--tatctctttgtaaataactcattgatagtggattggag 236  Q
      | | ||||||||||||||||||||||||||| ||||| |||||||||||||| | |||  |||||||||||||| ||  |||||||||||||||||||    
T  7597632 gagaataaatcaggttttgttcttggagagcttgttgaagctaatttcttataatccttttgtatctctttgtaaagaatgcattgatagtggattggag 7597731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 50 - 233
Target Start/End: Complemental strand, 11712238 - 11712055
Alignment:
Q  50 aggttatcttgggttgggaaacatttgtaaacacattggatgagtaaaatcttattgagtctcttgttcttaggaagagattaggaaaatggtagaaatc 149  Q
    ||||| |||||||||  ||| ||||||||||||  |||||||||| |||||  ||||||||| |||||||| ||||||||||  ||||||  || ||||     
T  11712238 aggttttcttgggttccgaagcatttgtaaacatcttggatgagtgaaatc--attgagtcttttgttctttggaagagattgagaaaataatataaatt 11712141  T
Q  150 aggttttgttcttggagagcttattgaaactaatttcttataaccattt--tatctctttgtaaataactcattgatagtggattg 233  Q
    ||||||||||| | |||||||| ||||| ||||||||||  |||| |||  |||||||||||||||||||||||||||||||||||    
T  11712140 aggttttgttccttgagagcttgttgaagctaatttcttgaaacccttttatatctctttgtaaataactcattgatagtggattg 11712055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 56 - 186
Target Start/End: Original strand, 38863809 - 38863936
Alignment:
Q  56 tcttgggttgggaaacatttgtaaacacattggatgagtaaaatcttattgagtctcttgttcttaggaagagattaggaaaatggtagaaatcaggttt 155  Q
    |||||||||||||||||||||||||||  ||||| ||||||||||  |||||||||||||||||| | ||||||||||| ||||||||||||| ||||||    
T  38863809 tcttgggttgggaaacatttgtaaacatcttgga-gagtaaaatc--attgagtctcttgttcttggaaagagattagggaaatggtagaaattaggttt 38863905  T
Q  156 tgttcttggagagcttattgaaactaatttc 186  Q
    |||| | |||||| || ||||||||||||||    
T  38863906 tgttttgggagagtttgttgaaactaatttc 38863936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 39 - 224
Target Start/End: Complemental strand, 3232044 - 3231859
Alignment:
Q  39 gttctcttgaaaggttatcttgggttgggaaacatttgtaaacacattggatgagtaaaatcttattgagtctcttgttcttaggaagagattaggaaaa 138  Q
    ||||| |||| ||||| ||||| ||||||||||||| |||||||| |||| || || || ||  |||||||||||||||||||||||||||||  |||||    
T  3232044 gttcttttgagaggttctcttgagttgggaaacattagtaaacaccttgggtgggtgaattc--attgagtctcttgttcttaggaagagattgagaaaa 3231947  T
Q  139 tggtagaaatcaggttttgttcttggagagcttattgaaactaatttcttataaccattt--tatctctttgtaaataactcattgat 224  Q
      |||||||| ||| ||||||||| | |||||| ||||| ||||||| || |||||||||  |||||||||||||| |||| ||||||    
T  3231946 atgtagaaattaggctttgttcttcgtgagcttgttgaagctaattttttttaaccattttgtatctctttgtaaagaacttattgat 3231859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 50 - 193
Target Start/End: Original strand, 41266900 - 41267041
Alignment:
Q  50 aggttatcttgggttgggaaacatttgtaaacacattggatgagtaaaatcttattgagtctcttgttcttaggaagagattaggaaaatggtagaaatc 149  Q
    ||||| ||||||||||||| ||| ||||||| || |||| ||||| |||||  |||||||||||||||||||||||||| ||  |||||||||||||||     
T  41266900 aggttctcttgggttgggagacagttgtaaatactttgggtgagtgaaatc--attgagtctcttgttcttaggaagagtttgagaaaatggtagaaatt 41266997  T
Q  150 aggttttgttcttggagagcttattgaaactaatttcttataac 193  Q
    ||||||||||||| |||| ||| |||| ||||||||||| ||||    
T  41266998 aggttttgttcttagagaacttgttgagactaatttcttgtaac 41267041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 51 - 193
Target Start/End: Complemental strand, 29796558 - 29796418
Alignment:
Q  51 ggttatcttgggttgggaaacatttgtaaacacattggatgagtaaaatcttattgagtctcttgttcttaggaagagattaggaaaatggtagaaatca 150  Q
    |||| ||||||||||||||||||||||||| |  ||||  |||| || ||  ||||||||||||||||||  ||||||||| ||||||  ||||||||||    
T  29796558 ggttctcttgggttgggaaacatttgtaaatatcttgggcgagtgaattc--attgagtctcttgttcttgagaagagattgggaaaagagtagaaatca 29796461  T
Q  151 ggttttgttcttggagagcttattgaaactaatttcttataac 193  Q
     | |||||||||||||| ||| ||||| || ||||||| ||||    
T  29796460 aggtttgttcttggagaacttgttgaagctgatttcttgtaac 29796418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 39 - 237
Target Start/End: Original strand, 30291526 - 30291724
Alignment:
Q  39 gttctcttgaaaggttatcttgggttgggaaacatttgtaaacacattggatgagt-aaaatcttattgagtctcttgttcttaggaagagattaggaaa 137  Q
    ||||||||||  |||| | |||||||||||||||||||||||||| |||| ||| | ||||||  ||||||| |||||||| | ||  ||||||  ||||    
T  30291526 gttctcttgaggggtttttttgggttgggaaacatttgtaaacaccttgggtgattgaaaatc--attgagtgtcttgttcattgg-tgagattgagaaa 30291622  T
Q  138 at-ggtagaaatcaggttttgttcttggagagcttattgaaactaatttcttataac-cattt-tatctctttgtaaataactcattgatagtggattgg 234  Q
    || ||||||||| ||||||||||||| | |||||| ||||| |||||||||| |||| ||||| |||| |||||| || || || |||||||||||||||    
T  30291623 atgggtagaaattaggttttgttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatcactttgt-aagaattctttgatagtggattgg 30291721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 106 - 229
Target Start/End: Original strand, 10240139 - 10240264
Alignment:
Q  106 gagtctcttgttcttaggaagagattaggaaaatggtagaaatcaggttttgttcttggagagcttattgaaactaatttcttataaccatttt--atct 203  Q
    ||||||||||||||| ||| |||||| ||| || | |||||||  || ||||||||| | |||||| ||||| |||||||||| ||||||| ||  ||||    
T  10240139 gagtctcttgttcttgggaggagattgggacaaagatagaaatttgggtttgttctttgtgagcttgttgaatctaatttcttgtaaccatgttggatct 10240238  T
Q  204 ctttgtaaataactcattgatagtgg 229  Q
    ||||||||| ||||||||||||||||    
T  10240239 ctttgtaaagaactcattgatagtgg 10240264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 56 - 237
Target Start/End: Original strand, 4731596 - 4731775
Alignment:
Q  56 tcttgggttgggaaacatttgtaaacacattggatgagt-aaaatcttattgagtctcttgttcttaggaagagattaggaaaatgg-tagaaatcaggt 153  Q
    ||||||||||||||||||| |||||||| |||| ||||| ||||||  ||||||| |||||||| | ||  |||||| ||||||||| ||||||| |||     
T  4731596 tcttgggttgggaaacatt-gtaaacaccttgggtgagtgaaaatc--attgagtgtcttgttcattggt-gagattgggaaaatgggtagaaattaggg 4731691  T
Q  154 tttgttcttggagagcttattgaaactaatttcttataacc-attt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
    || | |||| | |||||| ||||| |||||||||| ||||| |||| |||||||||||||  ||||||||||||||||||||||||    
T  4731692 tt-gctctttgtgagcttgttgaacctaatttcttgtaacccatttgtatctctttgtaag-aactcattgatagtggattggaga 4731775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 64 - 237
Target Start/End: Complemental strand, 8965914 - 8965742
Alignment:
Q  64 tgggaaacatttgtaaacacattggatgagt-aaaatcttattgagtctcttgttcttaggaagagattaggaaaatggtagaaatcaggttttgttctt 162  Q
    |||||||||||||||||||| |||| ||||| ||||||  ||||||| |||||||| | ||  |||||| |||||| ||||||||| ||| |||||||||    
T  8965914 tgggaaacatttgtaaacaccttgggtgagtgaaaatc--attgagtgtcttgttcattggt-gagattgggaaaaaggtagaaattagggtttgttctt 8965818  T
Q  163 ggagagcttattgaaactaatttcttataaccattt--tatctctttgtaaataactcattgatagtggattggaga 237  Q
       ||| || |||||  ||||||||||||||| |||  ||||||||||| || ||||||||||||||| || |||||    
T  8965817 tatgagtttgttgaagttaatttcttataacccttttatatctctttgt-aagaactcattgatagtgcatcggaga 8965742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 56 - 237
Target Start/End: Original strand, 43036361 - 43036540
Alignment:
Q  56 tcttgggttgggaaacatttgtaaacacattggatgagt-aaaatcttattgagtctcttgttcttaggaagagattaggaaaatgg-tagaaatcaggt 153  Q
    ||||||||||||||||||| |||||||| |||| ||||| ||||||  ||||||| |||||||| | ||  |||||| ||||||||| ||||||| |||     
T  43036361 tcttgggttgggaaacatt-gtaaacaccttgggtgagtgaaaatc--attgagtgtcttgttcattggt-gagattgggaaaatgggtagaaattaggg 43036456  T
Q  154 tttgttcttggagagcttattgaaactaatttcttataac-cattt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
    || |||||| | || ||| |||||||||||||||| |||  ||||| |||||||||||||  ||||||||||||||||||| ||||    
T  43036457 tt-gttctttgtgaacttgttgaaactaatttcttgtaattcatttgtatctctttgtaag-aactcattgatagtggatttgaga 43036540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 62 - 233
Target Start/End: Original strand, 44353736 - 44353906
Alignment:
Q  62 gttgggaaacatttgtaaacacattggatgagtaaaatcttattgagtctcttgttcttaggaagagattaggaaaatgg-tagaaatcaggttttgttc 160  Q
    ||||||||||| ||||||||||||||| |||||||||  | ||||||| |||||||| |  |  |||||| ||||||||| ||||||| ||| || ||||    
T  44353736 gttgggaaacaattgtaaacacattgggtgagtaaaaa-tcattgagtatcttgttcatttgt-gagattgggaaaatgggtagaaattagggtt-gttc 44353832  T
Q  161 ttggagagcttattgaaactaatttcttataac-cattt-tatctctttgtaaataactcattgatagtggattg 233  Q
    || | || ||| ||||| |||||||||| |||| ||||| |||||||||||||  ||||||||||||||||||||    
T  44353833 tttgtgaacttgttgaagctaatttcttgtaacacatttgtatctctttgtaag-aactcattgatagtggattg 44353906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 51 - 237
Target Start/End: Original strand, 18141753 - 18141937
Alignment:
Q  51 ggttatcttgggttgggaaacatttgtaaacacattggatgagt-aaaatcttattgagtctcttgttcttaggaagagattaggaaaat-ggtagaaat 148  Q
    |||| |||| ||||||||||||||||||||||| ||||  |||| ||||||  ||||||| |||||||| | ||  ||||||  |||||| |||||||||    
T  18141753 ggttctcttaggttgggaaacatttgtaaacaccttgggcgagtgaaaatc--attgagtgtcttgttcattgg-tgagattgtgaaaatgggtagaaat 18141849  T
Q  149 caggttttgttcttggagagcttattgaaactaatttcttataa-ccattt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
     |||  |||||||| | |||||| ||||| |||||||||| ||| |||||| |||| |||||| || ||||| ||||||||||||||||||    
T  18141850 tagg--ttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatcactttgt-aagaactctttgatagtggattggaga 18141937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 237
Target Start/End: Original strand, 40328784 - 40328897
Alignment:
Q  126 gagattaggaaaatgg-tagaaatcaggttttgttcttggagagcttattgaaactaatttcttataac-catttt--atctctttgtaaataactcatt 221  Q
    |||||| ||||||||| ||||||| |||||| |||||| | |||||| || ||||||||||||| |||| ||||||  ||||||||||||  ||||||||    
T  40328784 gagattgggaaaatgggtagaaattaggttt-gttctttgtgagcttgtttaaactaatttcttgtaactcattttgtatctctttgtaag-aactcatt 40328881  T
Q  222 gatagtggattggaga 237  Q
    ||||||||||||||||    
T  40328882 gatagtggattggaga 40328897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 56 - 237
Target Start/End: Original strand, 30143280 - 30143457
Alignment:
Q  56 tcttgggttgggaaacatttgtaaacacattggatgagt-aaaatcttattgagtctcttgttcttaggaagagattaggaaaatgg-tagaaatcaggt 153  Q
    ||||||||||||||||||| ||||||||||||| ||||| ||||||  |||| ||||  ||||| | ||   ||||| ||||||||| ||||||| |||     
T  30143280 tcttgggttgggaaacatt-gtaaacacattgggtgagtgaaaatc--attgtgtct--tgttcattggcc-agattgggaaaatgggtagaaattaggg 30143373  T
Q  154 tttgttcttggagagcttattgaaactaatttcttataacc-attt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
    || |||||| | |||||| ||||| |||||||||| ||||| |||| |||||||||||||  ||||||||||||||||||||||||    
T  30143374 tt-gttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgtaag-aactcattgatagtggattggaga 30143457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 58 - 237
Target Start/End: Complemental strand, 1292691 - 1292514
Alignment:
Q  58 ttgggttgggaaacatttgtaaacacattggatgagtaaaatcttattgagtctcttgttcttaggaagagattaggaaaatgg-tagaaatcaggtttt 156  Q
    ||||||||||||||| | || ||||| |||| ||||| |||  ||||||||| |||||||||| ||  ||||||  |||||||| ||||||| | ||||     
T  1292691 ttgggttgggaaacact-gtgaacaccttgggtgagtgaaaa-ttattgagtgtcttgttctttggt-gagattgagaaaatgggtagaaattaagttt- 1292596  T
Q  157 gttcttggagagcttattgaaactaatttcttataac-cattt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
    |||||| | |||||| ||||| |||||||||| |||| ||||| |||||||||||||  ||||||||||||||||||| ||||    
T  1292595 gttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatctctttgtaag-aactcattgatagtggatttgaga 1292514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 237
Target Start/End: Original strand, 15212724 - 15212903
Alignment:
Q  56 tcttgggttgggaaacatttgtaaacacattggatgagt-aaaatcttattgagtctcttgttcttaggaagagattaggaaaatgg-tagaaatcaggt 153  Q
    ||||||||||||||||||| |||||||| |||| ||||| ||||||  ||||| | |||||||| | ||  |||||| ||||||||| ||||||| |||     
T  15212724 tcttgggttgggaaacatt-gtaaacaccttgggtgagtgaaaatc--attgaatgtcttgttcattggt-gagattgggaaaatgggtagaaattaggg 15212819  T
Q  154 tttgttcttggagagcttattgaaactaatttcttataacc-attt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
    || |||||| | || ||| ||||| |||||||||| ||||| |||| |||||||||||||  |||||||||||| |||||||||||    
T  15212820 tt-gttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctctttgtaag-aactcattgataatggattggaga 15212903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 237
Target Start/End: Original strand, 33352088 - 33352267
Alignment:
Q  56 tcttgggttgggaaacatttgtaaacacattggatgagt-aaaatcttattgagtctcttgttcttaggaagagattaggaaaatgg-tagaaatcaggt 153  Q
    ||||||||||||||||||| |||||||| |||| ||| | ||||||  ||||||| |||||||| | ||  |||||| ||||||||| || |||| |||     
T  33352088 tcttgggttgggaaacatt-gtaaacaccttgggtgattgaaaatc--attgagtgtcttgttcattggt-gagattgggaaaatgggtaaaaattaggg 33352183  T
Q  154 tttgttcttggagagcttattgaaactaatttcttataacc-attt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
    || |||||| | || ||| ||||| |||||||||| ||||| |||| |||||||||||||  ||||||||||||||||||||||||    
T  33352184 tt-gttctttgtgaacttgttgaacctaatttcttgtaacccatttgtatctctttgtaag-aactcattgatagtggattggaga 33352267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 126 - 232
Target Start/End: Complemental strand, 19491862 - 19491755
Alignment:
Q  126 gagattaggaaaatgg-tagaaatcaggttttgttcttggagagcttattgaaactaatttcttataa-ccattt-tatctctttgtaaataactcattg 222  Q
    |||||| ||||||||| ||||||| |||||| |||||| | |||||| |||||||||||||||| ||| |||||| ||||||||||| || ||||| |||    
T  19491862 gagattgggaaaatgggtagaaattaggttt-gttctttgtgagcttgttgaaactaatttcttgtaacccatttgtatctctttgt-aagaactcgttg 19491765  T
Q  223 atagtggatt 232  Q
    ||||||||||    
T  19491764 atagtggatt 19491755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 62 - 237
Target Start/End: Original strand, 40221689 - 40221862
Alignment:
Q  62 gttgggaaacatttgtaaacacattggatgagt-aaaatcttattgagtctcttgttcttaggaagagattaggaaaatgg-tagaaatcaggttttgtt 159  Q
    ||||||||||| |||||||||| ||||  |||| |||||| |   |||| |||||||||| ||  |||||| | ||||||| ||||||| ||| || |||    
T  40221689 gttgggaaacaattgtaaacaccttgggagagtgaaaatcat---gagtgtcttgttctttggt-gagattggtaaaatgggtagaaattagggtt-gtt 40221783  T
Q  160 cttggagagcttattgaaactaatttcttataa-ccattt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
    ||| | |||||| |||||||||||||||| ||| |||||| ||||||||||| || ||||| ||||||||||||||||||    
T  40221784 ctttgtgagcttgttgaaactaatttcttgtaacccatttgtatctctttgt-aagaactcgttgatagtggattggaga 40221862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 39 - 237
Target Start/End: Original strand, 40321001 - 40321197
Alignment:
Q  39 gttctcttgaaaggttatcttgggttgggaaacatttgtaaacacattggatgagt-aaaatcttattgagtctcttgttcttaggaagagattaggaaa 137  Q
    ||||||||||  |||| ||||| ||||||||||| |||||||||| |||  ||| | ||||||  ||||||| |||||||| ||||  |||||| |||||    
T  40321001 gttctcttgaggggttctcttgagttgggaaaca-ttgtaaacaccttgagtgactgaaaatc--attgagtgtcttgttcatagg-tgagattgggaaa 40321096  T
Q  138 at-ggtagaaatcaggttttgttcttggagagcttattgaaactaatttcttataaccattt--tatctctttgtaaataactcattgatagtggattgg 234  Q
    || ||||||||| |||  |||||| | | |||||| |||||  ||||||||| |||||  ||  |||||||||||||| ||||| |||||||||||||||    
T  40321097 atgggtagaaattagg-gttgttcattgtgagcttgttgaagttaatttcttgtaacccattagtatctctttgtaaa-aactctttgatagtggattgg 40321194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 155 - 237
Target Start/End: Complemental strand, 42435125 - 42435042
Alignment:
Q  155 ttgttcttggagagcttattgaaactaatttcttataacc-attt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
    |||||||| | |||||| ||||| |||||||||| ||||| |||| |||||||||||||  ||||||||||||||||||||||||    
T  42435125 ttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgtaag-aactcattgatagtggattggaga 42435042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 233
Target Start/End: Complemental strand, 3303905 - 3303725
Alignment:
Q  51 ggttatcttgggttgggaaacatttgtaaacacattggatgagt-aaaatcttattgagtctcttgttcttaggaagagattaggaaaatgg-tagaaat 148  Q
    |||| ||||||||||||||||||| |||||||| |||  ||||| ||||||  ||||||| |||||||  | ||  |||||| ||||||||| |||||||    
T  3303905 ggttctcttgggttgggaaacatt-gtaaacaccttgagtgagtgaaaatc--attgagtatcttgtttattggt-gagattgggaaaatgggtagaaat 3303810  T
Q  149 caggttttgttcttggagagcttattgaaactaatttcttataac-cattt-tatctctttgtaaataactcattgatagtggattg 233  Q
     | |||| |||||| | |||||| || || |||||||||| |||| ||||| |||||||||||||  ||||||||||||||||||||    
T  3303809 taagttt-gttctttgtgagcttgtttaacctaatttcttgtaactcatttgtatctctttgtaag-aactcattgatagtggattg 3303725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 122 - 237
Target Start/End: Original strand, 11137027 - 11137146
Alignment:
Q  122 ggaagagattaggaaaatggtagaaatcaggttttgttcttggagagcttattgaaactaatttcttataaccattt--tatctctttgt---aaataac 216  Q
    ||||||||||  ||||||||||||||| | || | || |||| ||| ||| ||||| |||||||||||||||| |||  |||||||||||   ||| |||    
T  11137027 ggaagagattgagaaaatggtagaaattaagtat-gtccttgaagaacttgttgaagctaatttcttataaccgttttgtatctctttgtaaaaaaaaac 11137125  T
Q  217 tcattgatagtggattggaga 237  Q
    |||||||||||| ||||||||    
T  11137126 tcattgatagtgaattggaga 11137146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 154 - 237
Target Start/End: Original strand, 1822325 - 1822410
Alignment:
Q  154 tttgttcttggagagcttattgaaactaatttcttataaccattttatctct--ttgtaaataactcattgatagtggattggaga 237  Q
    ||||||||| | |||||| ||||| |||||||||| ||||| |||||| |||  |||||||||||||| | |||||| ||||||||    
T  1822325 tttgttctttgtgagcttgttgaagctaatttcttgtaacccttttatatctatttgtaaataactcactaatagtgaattggaga 1822410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 154 - 237
Target Start/End: Original strand, 1856770 - 1856855
Alignment:
Q  154 tttgttcttggagagcttattgaaactaatttcttataaccattttatctct--ttgtaaataactcattgatagtggattggaga 237  Q
    ||||||||| | |||||| ||||| |||||||||| ||||| |||||| |||  |||||||||||||| | |||||| ||||||||    
T  1856770 tttgttctttgtgagcttgttgaagctaatttcttgtaacccttttatatctatttgtaaataactcactaatagtgaattggaga 1856855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 126 - 237
Target Start/End: Original strand, 4283529 - 4283641
Alignment:
Q  126 gagattaggaaaatgg-tagaaatcaggttttgttcttggagagcttattgaaactaatttcttataacc-attt-tatctctttgtaaataactcattg 222  Q
    |||||| ||||||||| ||||||| ||| || ||| || | |||||| ||||| |||||||||| ||||| |||| |||||||||||||  |||||||||    
T  4283529 gagattgggaaaatgggtagaaattagggtt-gttttttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgtaag-aactcattg 4283626  T
Q  223 atagtggattggaga 237  Q
    |||||||||||||||    
T  4283627 atagtggattggaga 4283641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 56 - 233
Target Start/End: Original strand, 27811216 - 27811391
Alignment:
Q  56 tcttgggttgggaaacatttgtaaacacattggatgagt-aaaatcttattgagtctcttgttcttaggaagagattaggaaaatgg-tagaaatcaggt 153  Q
    |||| |||||| ||||||| |||||||| |||| ||||| ||||||  ||||||| |||||||| | ||  |||||| ||||||||| ||||||| |||     
T  27811216 tcttaggttggaaaacatt-gtaaacaccttgggtgagtgaaaatc--attgagtgtcttgttcattggt-gagattgggaaaatgggtagaaattaggg 27811311  T
Q  154 tttgttcttggagagcttattgaaactaatttcttataacc-attt-tatctctttgtaaataactcattgatagtggattg 233  Q
    || |||||| | |||||| ||||| |||||||||| ||||| |||| |||||||||||||  ||| ||||||||||||||||    
T  27811312 tt-gttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgtaag-aacccattgatagtggattg 27811391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 237
Target Start/End: Complemental strand, 32902421 - 32902224
Alignment:
Q  39 gttctcttgaaaggttatcttgggttgggaaacatttgtaaacacattggatgagtaaaatcttattgagtctcttgttcttaggaagagattaggaaaa 138  Q
    |||||||||| |||||||||||| |||||||||||||| || ||||||   ||||| |||||  ||||||||||||| || |  || ||||||   |||     
T  32902421 gttctcttgagaggttatcttggattgggaaacatttgaaagcacattaagtgagtgaaatc--attgagtctcttgatcatgagaggagattgataaat 32902324  T
Q  139 tggtagaaatcaggttttgttcttggagagcttattgaaactaatttcttataaccattt--tatctctttgtaaataactcattgatagtggattggag 236  Q
     ||||||||| | | ||||||| ||||||   | ||||| |||||||||| ||||  |||  ||||||||| |||| || |||||||||||| ||| |||    
T  32902323 gggtagaaattatg-tttgttcatggagactctgttgaagctaatttcttgtaacttttttgtatctctttctaaagaattcattgatagtgaatttgag 32902225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 179 - 237
Target Start/End: Complemental strand, 38860472 - 38860414
Alignment:
Q  179 ctaatttcttataaccattttatctctttgtaaataactcattgatagtggattggaga 237  Q
    ||||||||||||||| ||| |||||||||||||  ||||  ||||||||||||||||||    
T  38860472 ctaatttcttataactattgtatctctttgtaagaaactatttgatagtggattggaga 38860414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 237
Target Start/End: Original strand, 18655434 - 18655517
Alignment:
Q  155 ttgttcttggagagcttattgaaactaatttcttataacc-attt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
    |||||||| | |||||| ||||| |||||||||| ||||| |||| |||||||||||||  ||||||||||||||||||| ||||    
T  18655434 ttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgtaag-aactcattgatagtggattagaga 18655517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 237
Target Start/End: Original strand, 30909406 - 30909484
Alignment:
Q  159 tcttggagagcttattgaaactaatttcttataac-cattttatctctttgtaaataactcattgatagtggattggaga 237  Q
    ||||||||||||| || ||||||||||||| |||| | || ||||||||||| ||| |||| ||||||||| ||||||||    
T  30909406 tcttggagagcttgtttaaactaatttcttgtaactctttgtatctctttgt-aatgactcgttgatagtgaattggaga 30909484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 233
Target Start/End: Complemental strand, 1345534 - 1345426
Alignment:
Q  126 gagattaggaaaatg-gtagaaatcaggttttgttcttggagagcttattgaaactaatttcttataacc-attt-tatctctttgtaaataactcattg 222  Q
    |||||| |||||||| |||||||| ||| || |||||| | ||| |||||||| |||||||||| ||||| || | |||||||||| ||| |||||||||    
T  1345534 gagattgggaaaatgtgtagaaattagggtt-gttctttgtgagtttattgaagctaatttcttgtaacccatatgtatctctttg-aaagaactcattg 1345437  T
Q  223 atagtggattg 233  Q
    |||||||||||    
T  1345436 atagtggattg 1345426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 237
Target Start/End: Original strand, 42498228 - 42498311
Alignment:
Q  155 ttgttcttggagagcttattgaaactaatttcttataaccatttt--atctctttgtaaataactcattgatagtggattggaga 237  Q
    |||||||| | || ||| ||||| |||||||||| ||||| ||||  || |||||||||  ||||||||||||||||||||||||    
T  42498228 ttgttctttgtgaacttgttgaagctaatttcttgtaacccttttgtatttctttgtaag-aactcattgatagtggattggaga 42498311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 237
Target Start/End: Original strand, 5689329 - 5689388
Alignment:
Q  179 ctaatttcttataacc-attt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
    |||||||||| ||||| |||| |||||||||||||  ||||||||||||||||||||||||    
T  5689329 ctaatttcttgtaacccatttgtatctctttgtaag-aactcattgatagtggattggaga 5689388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 8153701 - 8153737
Alignment:
Q  58 ttgggttgggaaacatttgtaaacacattggatgagt 94  Q
    ||||||||||||||||||||| |||| ||||||||||    
T  8153701 ttgggttgggaaacatttgtatacaccttggatgagt 8153737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 237
Target Start/End: Original strand, 9765803 - 9765862
Alignment:
Q  179 ctaatttcttataacc-attt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
    |||||||||| ||||| |||| |||||||||||||  ||||||||||||||||||||||||    
T  9765803 ctaatttcttgtaacccatttgtatctctttgtaag-aactcattgatagtggattggaga 9765862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 237
Target Start/End: Complemental strand, 34256616 - 34256558
Alignment:
Q  180 taatttcttataaccatttt--atctctttgtaaataactcattgatagtggattggaga 237  Q
    ||||||||| ||||| ||||  ||||||||||||  ||||||||||||||||||||||||    
T  34256616 taatttcttgtaacccttttgtatctctttgtaag-aactcattgatagtggattggaga 34256558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 76; Significance: 3e-35; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 51 - 237
Target Start/End: Original strand, 4045355 - 4045541
Alignment:
Q  51 ggttatcttgggttgggaaacatttgtaaacacattggatgagt-aaaatcttattgagtctcttgttcttaggaagagattaggaaaatggtagaaatc 149  Q
    |||| ||||| |||||||||||||||||||||| | || ||||| ||||||  ||||||| |||||||  | ||| |||||| ||||||||||||||||     
T  4045355 ggttctcttgagttgggaaacatttgtaaacacctagggtgagtgaaaatc--attgagtgtcttgtttattgga-gagattgggaaaatggtagaaatt 4045451  T
Q  150 aggttttgttcttggagagcttattgaaactaatttcttataaccattttat--ctctttgtaaataactcattgatagtggattggaga 237  Q
    ||| |||||||||   |||||| ||||| |||||||||| ||| ||||||||  ||||||||||||||||||||||||||||||||||||    
T  4045452 agggtttgttctttatgagcttgttgaagctaatttcttgtaatcattttatatctctttgtaaataactcattgatagtggattggaga 4045541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 126 - 237
Target Start/End: Complemental strand, 2973102 - 2972990
Alignment:
Q  126 gagattaggaaaatgg-tagaaatcaggttttgttcttggagagcttattgaaactaatttcttataacc-attt-tatctctttgtaaataactcattg 222  Q
    |||||| ||||||||| ||||||| |||||| |||||| | |||||| ||||| |||||||||| ||||| |||| |||||||||||||  |||||||||    
T  2973102 gagattgggaaaatgggtagaaattaggttt-gttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgtaag-aactcattg 2973005  T
Q  223 atagtggattggaga 237  Q
    |||||||||||||||    
T  2973004 atagtggattggaga 2972990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 237
Target Start/End: Complemental strand, 3808872 - 3808759
Alignment:
Q  126 gagattaggaaaat-ggtagaaatcaggttttgttcttggagagcttattgaaactaatttcttataacc-atttt--atctctttgtaaataactcatt 221  Q
    |||||| ||||||| ||||||||| ||| || |||||| | |||||| |||||||||||||||| ||||| |||||  ||||||||||||  ||||||||    
T  3808872 gagattgggaaaataggtagaaattagggtt-gttctttgtgagcttgttgaaactaatttcttgtaacccattttgtatctctttgtaag-aactcatt 3808775  T
Q  222 gatagtggattggaga 237  Q
    ||||||||||||||||    
T  3808774 gatagtggattggaga 3808759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 60 - 237
Target Start/End: Complemental strand, 5406424 - 5406251
Alignment:
Q  60 gggttgggaaacatttgtaaacacattggatgagt-aaaatcttattgagtctcttgttcttaggaagagattaggaaaatggtagaaatcaggttttgt 158  Q
    ||||||||||||||| |||||||| |||| ||||| ||||||  ||||||| |||||||| | ||  |||||| |||||||||||||||| ||| || ||    
T  5406424 gggttgggaaacatt-gtaaacaccttgg-tgagtgaaaatc--attgagtgtcttgttcattggt-gagattgggaaaatggtagaaattagggtt-gt 5406331  T
Q  159 tcttggagagcttattgaaactaatttcttataaccatttt--atctctttgtaaataactcattgatagtggattggaga 237  Q
    |||| | || ||| |  || |||||||||| ||||| ||||  ||||||||||||  ||||||||||||||||||||||||    
T  5406330 tctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctctttgtaag-aactcattgatagtggattggaga 5406251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 60 - 237
Target Start/End: Complemental strand, 5410749 - 5410576
Alignment:
Q  60 gggttgggaaacatttgtaaacacattggatgagt-aaaatcttattgagtctcttgttcttaggaagagattaggaaaatggtagaaatcaggttttgt 158  Q
    ||||||||||||||| |||||||| |||| ||||| ||||||  ||||||| |||||||| | ||  |||||| |||||||||||||||| ||| || ||    
T  5410749 gggttgggaaacatt-gtaaacaccttgg-tgagtgaaaatc--attgagtgtcttgttcattggt-gagattgggaaaatggtagaaattagggtt-gt 5410656  T
Q  159 tcttggagagcttattgaaactaatttcttataaccatttt--atctctttgtaaataactcattgatagtggattggaga 237  Q
    |||| | || ||| |  || |||||||||| ||||| ||||  ||||||||||||  ||||||||||||||||||||||||    
T  5410655 tctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctctttgtaag-aactcattgatagtggattggaga 5410576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 60 - 237
Target Start/End: Complemental strand, 5413618 - 5413445
Alignment:
Q  60 gggttgggaaacatttgtaaacacattggatgagt-aaaatcttattgagtctcttgttcttaggaagagattaggaaaatggtagaaatcaggttttgt 158  Q
    ||||||||||||||| ||||||||||||| ||||| ||||||  ||||||| |||||||| | ||  |||||| |||||| ||||||||| ||| || ||    
T  5413618 gggttgggaaacatt-gtaaacacattgg-tgagtgaaaatc--attgagtgtcttgttcattggt-gagattgggaaaaaggtagaaattagggtt-gt 5413525  T
Q  159 tcttggagagcttattgaaactaatttcttataaccatttt--atctctttgtaaataactcattgatagtggattggaga 237  Q
    |||| | || ||| |  || |||||||||| ||||| ||||  ||||||||||||  ||||||||||||||||||||||||    
T  5413524 tctttgcgaacttgtcaaagctaatttcttgtaacccttttgtatctctttgtaag-aactcattgatagtggattggaga 5413445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 126 - 237
Target Start/End: Original strand, 17758028 - 17758140
Alignment:
Q  126 gagattaggaaaatgg-tagaaatcaggttttgttcttggagagcttattgaaactaatttcttataacc-attt-tatctctttgtaaataactcattg 222  Q
    |||||| ||||||||| ||||||| ||| || |||||| | |||||| ||||| |||||||||| ||||| |||| |||||||||||||  |||||||||    
T  17758028 gagattgggaaaatgggtagaaattagggtt-gttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgtaag-aactcattg 17758125  T
Q  223 atagtggattggaga 237  Q
    |||||||||||||||    
T  17758126 atagtggattggaga 17758140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 126 - 237
Target Start/End: Original strand, 21588936 - 21589048
Alignment:
Q  126 gagattaggaaaatgg-tagaaatcaggttttgttcttggagagcttattgaaactaatttcttataacc-attt-tatctctttgtaaataactcattg 222  Q
    |||||| ||||||||| ||||||| ||| || |||||| | |||||| ||||| |||||||||| ||||| |||| |||||||||||||  |||||||||    
T  21588936 gagattgggaaaatgggtagaaattagggtt-gttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgtaag-aactcattg 21589033  T
Q  223 atagtggattggaga 237  Q
    |||||||||||||||    
T  21589034 atagtggattggaga 21589048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 126 - 237
Target Start/End: Original strand, 21593669 - 21593781
Alignment:
Q  126 gagattaggaaaatgg-tagaaatcaggttttgttcttggagagcttattgaaactaatttcttataacc-attt-tatctctttgtaaataactcattg 222  Q
    |||||| ||||||||| ||||||| ||| || |||||| | |||||| ||||| |||||||||| ||||| |||| |||||||||||||  |||||||||    
T  21593669 gagattgggaaaatgggtagaaattagggtt-gttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgtaag-aactcattg 21593766  T
Q  223 atagtggattggaga 237  Q
    |||||||||||||||    
T  21593767 atagtggattggaga 21593781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 237
Target Start/End: Complemental strand, 28137638 - 28137459
Alignment:
Q  56 tcttgggttgggaaacatttgtaaacacattggatgagt-aaaatcttattgagtctcttgttcttaggaagagattaggaaaatgg-tagaaatcaggt 153  Q
    ||||||||||||||||||| |||||||| |||| ||||| ||||||  ||||||| |||||||| | ||  |||| | ||||||||| ||||||| |||     
T  28137638 tcttgggttgggaaacatt-gtaaacaccttgggtgagtgaaaatc--attgagtgtcttgttcattggt-gagaatgggaaaatgggtagaaattaggg 28137543  T
Q  154 tttgttcttggagagcttattgaaactaatttcttataacc-attt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
    || |||||| | |||||| || || |||||||||| ||||| |||| ||| |||||||||  ||||||||||||||||||||||||    
T  28137542 tt-gttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatttctttgtaag-aactcattgatagtggattggaga 28137459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 56 - 237
Target Start/End: Complemental strand, 2171760 - 2171583
Alignment:
Q  56 tcttgggttgggaaacatttgtaaacacattggatgagt-aaaatcttattgagtctcttgttcttaggaagagattaggaaaa-tggtagaaatcaggt 153  Q
    ||||||||||||||||||| |||||||| |||| ||||| ||||||  ||||||| |||||||| | ||  |||||| |||||| |||||||||| |||     
T  2171760 tcttgggttgggaaacatt-gtaaacaccttgg-tgagtgaaaatc--attgagtgtcttgttcattggt-gagattgggaaaaatggtagaaattaggg 2171666  T
Q  154 tttgttcttggagagcttattgaaactaatttcttataaccattt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
    || |||||| | || ||| |  || |||||||||| ||||| ||| |||||||||||||  ||||||||||||||||||||||||    
T  2171665 tt-gttctttgtgaacttgtcaaagctaatttcttgtaaccctttgtatctctttgtaag-aactcattgatagtggattggaga 2171583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 52 - 237
Target Start/End: Complemental strand, 26954519 - 26954337
Alignment:
Q  52 gttatcttgggttgggaaacatttgtaaacacattggatgagt-aaaatcttattgagtctcttgttcttaggaagagattaggaaaatggtagaaatca 150  Q
    |||||||| |||||||||||||| |||||||| || |  |||| ||||||  ||||||| |||||||| || |  |||||| ||||| ||||| |||| |    
T  26954519 gttatcttaggttgggaaacatt-gtaaacacctttggggagtgaaaatc--attgagtgtcttgttcatatgt-gagattgggaaattggtataaatta 26954424  T
Q  151 ggttttgttcttggagagcttattgaaactaatttcttataac-cattt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
    || || |||||| | |||||| ||||| |||||||||| |||| ||| | |||||||||||||  ||||||||||||||||||||||||    
T  26954423 gggtt-gttctttgtgagcttgttgaagctaatttcttgtaactcatctgtatctctttgtaag-aactcattgatagtggattggaga 26954337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 155 - 237
Target Start/End: Complemental strand, 26830257 - 26830174
Alignment:
Q  155 ttgttcttggagagcttattgaaactaatttcttataa-ccattt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
    |||||||| | |||||| ||||| |||||||||| ||| |||||| |||||||||||||  ||||||||||||||||||||||||    
T  26830257 ttgttctttgtgagcttgttgaagctaatttcttgtaatccatttgtatctctttgtaag-aactcattgatagtggattggaga 26830174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 237
Target Start/End: Complemental strand, 9183258 - 9183082
Alignment:
Q  59 tgggttgggaaacatttgtaaacacattggatgagt-aaaatcttattgagtctcttgttcttaggaagagattaggaaaatgg-tagaaatcaggtttt 156  Q
    |||||||||||||||| |||||||| |||| ||||| ||||||  ||||||| |||||||| | ||  ||||||  |||||||| ||||||| ||| ||     
T  9183258 tgggttgggaaacatt-gtaaacaccttgggtgagtgaaaatc--attgagtgtcttgttcattggt-gagattgagaaaatgggtagaaattagggtt- 9183164  T
Q  157 gttcttggagagcttattgaaactaatttcttataacc-attt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
    |||||| | ||  || ||||| |||||||||| ||||| |||| |||||||||||||  ||||||||||||||||||||||||    
T  9183163 gttctttgtgaatttgttgaagctaatttcttgtaacccatttgtatctctttgtaag-aactcattgatagtggattggaga 9183082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 141 - 237
Target Start/End: Original strand, 5043648 - 5043744
Alignment:
Q  141 gtagaaatcaggttttgttcttggagagcttattgaaactaatttcttataac-cattt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
    |||||||| |||||| |||||| | |||||| ||||| |||||||||| |||| ||||| |||||||||||||  |||||||||||||| |||||||||    
T  5043648 gtagaaattaggttt-gttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatctctttgtaag-aactcattgatagtagattggaga 5043744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 126 - 237
Target Start/End: Complemental strand, 31404837 - 31404726
Alignment:
Q  126 gagattaggaaaatggtagaaatcaggttttgttcttggagagcttattgaaactaatttcttataaccatttt--atctctttgtaaataactcattga 223  Q
    |||||| |||||||||||||||| ||| || |||||| | || ||| |  || |||||||||| ||||| ||||  ||||||||||||  ||||||||||    
T  31404837 gagattgggaaaatggtagaaattagggtt-gttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctctttgtaag-aactcattga 31404740  T
Q  224 tagtggattggaga 237  Q
    ||||||||||||||    
T  31404739 tagtggattggaga 31404726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 237
Target Start/End: Complemental strand, 603222 - 603139
Alignment:
Q  155 ttgttcttggagagcttattgaaactaatttcttataacc-attt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
    |||||||| | |||||| ||||| |||||||||| ||||| |||| |||||||||||||  ||||| ||||||||||||||||||    
T  603222 ttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgtaag-aactcgttgatagtggattggaga 603139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 135 - 225
Target Start/End: Original strand, 186729 - 186820
Alignment:
Q  135 aaaatggtagaaatcaggttttgttcttggagagcttattgaaactaatttcttataaccattt--tatctctttgtaaataactcattgata 225  Q
    |||||||||||||| |||||| ||||||||||||||| |||||  ||| || ||||| |  |||  |||||||||||||| || |||||||||    
T  186729 aaaatggtagaaataaggttt-gttcttggagagcttgttgaagttaaatttttatagctcttttgtatctctttgtaaagaattcattgata 186820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 103 - 237
Target Start/End: Original strand, 25073551 - 25073686
Alignment:
Q  103 attgagtctcttgttcttaggaagagattaggaaaatggtagaaatcaggttttgttcttggagagcttattgaaactaatttcttataaccatttt--a 200  Q
    ||||||| |||||||| | ||| ||||||   |||||||||||||| || |||  ||||| | |||||| || || ||| ||| || ||||| ||||  |    
T  25073551 attgagtatcttgttcatgggaggagattgaaaaaatggtagaaattagattta-ttcttcgtgagcttgttaaagctattttattgtaacccttttgta 25073649  T
Q  201 tctctttgtaaataactcattgatagtggattggaga 237  Q
    ||||| |||||| ||||||||||||||||||| ||||    
T  25073650 tctctatgtaaagaactcattgatagtggattagaga 25073686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 69; Significance: 4e-31; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 58 - 237
Target Start/End: Original strand, 33191771 - 33191948
Alignment:
Q  58 ttgggttgggaaacatttgtaaacacattggatgagtaaaatcttattgagtctcttgttcttaggaagagattaggaaaatggtagaaatcaggttttg 157  Q
    ||||| || |||||||||||||||| ||| | ||| | ||||   ||||||||||||||| || | ||||||||  |||||| |||||||  | ||||||    
T  33191771 ttgggctgagaaacatttgtaaacatattaggtgattgaaata--attgagtctcttgttattggtaagagattgagaaaatagtagaaactatgttttg 33191868  T
Q  158 ttcttggagagcttattgaaactaatttcttataaccattttatctctttgtaaataactcattgatagtggattggaga 237  Q
    ||||| |||||||| ||||| |||| ||||| |||||||||||| |||||||||| ||||||||||||||||||| ||||    
T  33191869 ttcttagagagcttgttgaagctaagttcttgtaaccattttatgtctttgtaaagaactcattgatagtggattagaga 33191948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 39 - 237
Target Start/End: Complemental strand, 1314053 - 1313855
Alignment:
Q  39 gttctcttgaaaggttatcttgggttgggaaacatttgtaaacacattggatgagtaaaatcttattgagtctcttgttcttaggaagagattaggaaaa 138  Q
    |||||||||| |||   |||||| ||||||||||||||||||||| |||| ||||| ||||  ||||||||||||| |||||  |||||||||  |||||    
T  1314053 gttctcttgagaggacctcttggattgggaaacatttgtaaacaccttgggtgagtgaaat--tattgagtctcttattcttgagaagagattgagaaaa 1313956  T
Q  139 tggtagaaatcaggttttgttcttggagagcttattgaaactaatttcttataaccattt--tatctctttgtaaataactcattgatagtggattggag 236  Q
     |||| |||| | |||||||||||||||||||| || || ||||||||||  || | |||  ||| |||||| ||| |||||||||||| |||||| |||    
T  1313955 gggtaaaaattatgttttgttcttggagagcttgttaaagctaatttcttgcaagccttttgtatatctttgaaaagaactcattgatattggattagag 1313856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 14 - 237
Target Start/End: Complemental strand, 29196661 - 29196437
Alignment:
Q  14 tttagggttgagtgtctttg-taaatgttctcttgaaaggttatcttgggttgggaaacatttgtaaacacattggatgagt-aaaatcttattgagtct 111  Q
    |||||||||||| ||||||| | |  ||| |||||| ||||| |||||||||||||||||||||||||||| |||| ||||| ||||||  ||||||| |    
T  29196661 tttagggttgagggtctttgattagggttttcttgagaggttctcttgggttgggaaacatttgtaaacaccttgggtgagtgaaaatc--attgagtgt 29196564  T
Q  112 cttgttcttaggaagagattaggaaaat-ggtagaaatcaggttttgttcttggagagcttattgaaactaatttcttataa-ccattt-tatctctttg 208  Q
    ||||||| | ||  |||||| ||||||| ||||||||| ||| ||||||||| | |||||| |  || ||||||||||  || |||||| ||||||||||    
T  29196563 cttgttcattgg-tgagattgggaaaatgggtagaaattagggtttgttctttgtgagcttgtcaaagctaatttcttggaacccatttgtatctctttg 29196465  T
Q  209 taaataactcattgatagtggattggaga 237  Q
    | || ||||||||||||||||||||||||    
T  29196464 t-aagaactcattgatagtggattggaga 29196437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 51 - 237
Target Start/End: Original strand, 32891036 - 32891221
Alignment:
Q  51 ggttatcttgggttgggaaacatttgtaaacacattggatgagtaaaatcttattgagtctcttgttcttaggaagagattaggaaaatgg-tagaaatc 149  Q
    |||| ||||||| ||||||||||| |||||||| |||| |||||||||  | ||||||| |||||||||| ||  ||||||  |||||||| |||||||     
T  32891036 ggttctcttggggtgggaaacatt-gtaaacaccttgggtgagtaaaaa-tcattgagtgtcttgttcttcggt-gagattgagaaaatgggtagaaatt 32891132  T
Q  150 aggttttgttcttggagagcttattgaaactaatttcttataac-cattt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
    | ||||||||||| | |||||| ||||| |||||||||| |||| ||||| ||||||||||| || ||||| ||||||||||||||||||    
T  32891133 aagttttgttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatctctttgt-aagaactcgttgatagtggattggaga 32891221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 51 - 237
Target Start/End: Complemental strand, 44700714 - 44700529
Alignment:
Q  51 ggttatcttgggttgggaaacatttgtaaacacattggatgagt-aaaatcttattgagtctcttgttcttaggaagagattaggaaaat-ggtagaaat 148  Q
    |||| |||||||||||||||||||||||||||| |||| ||||| ||||||  ||||||| |||||||| | ||  |||||| ||||||| |||||||||    
T  44700714 ggttctcttgggttgggaaacatttgtaaacaccttgggtgagtgaaaatc--attgagtgtcttgttcattgg-tgagattgggaaaatgggtagaaat 44700618  T
Q  149 caggttttgttcttggagagcttattgaaactaatttcttataacc-attt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
     |||  |||||||| | ||| || ||||| |||||||||| ||||| |||| ||||||||||| || ||||| ||||||||||||||||||    
T  44700617 tagg-gttgttctttgtgagtttgttgaagctaatttcttgtaacctatttgtatctctttgt-aagaactctttgatagtggattggaga 44700529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 56 - 237
Target Start/End: Original strand, 40734436 - 40734615
Alignment:
Q  56 tcttgggttgggaaacatttgtaaacacattggatgagt-aaaatcttattgagtctcttgttcttaggaagagattaggaaaatgg-tagaaatcaggt 153  Q
    ||||||||||||||||||| |||||||| |||| ||||| ||||||  ||||||| |||||||| | ||  |||||| ||||||||| ||||||| |||     
T  40734436 tcttgggttgggaaacatt-gtaaacaccttgggtgagtgaaaatc--attgagtgtcttgttcattggt-gagattgggaaaatgggtagaaattaggg 40734531  T
Q  154 tttgttcttggagagcttattgaaactaatttcttataac-cattt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
    || |||||| | |||||| ||||| |||||||||| |||| ||||| |||| ||||||||  ||||||||||||||||||||||||    
T  40734532 tt-gttctttgtgagcttgttgaacctaatttcttgtaacacatttgtatccctttgtaag-aactcattgatagtggattggaga 40734615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 56 - 237
Target Start/End: Original strand, 44331483 - 44331662
Alignment:
Q  56 tcttgggttgggaaacatttgtaaacacattggatgagt-aaaatcttattgagtctcttgttcttaggaagagattaggaaaatgg-tagaaatcaggt 153  Q
    ||||||||||||||||||| |||||||| |||| ||||| ||||||  ||||||| |||||||| | ||  |||||||||||||||| ||||||| |||     
T  44331483 tcttgggttgggaaacatt-gtaaacaccttgggtgagtgaaaatc--attgagtgtcttgttcattggt-gagattaggaaaatgggtagaaattaggg 44331578  T
Q  154 tttgttcttggagagcttattgaaactaatttcttataa-ccattt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
    || |||| | | |||||| ||||| |||||||||| ||| |||||| |||||||||||||  |||| |||||||||||||||||||    
T  44331579 tt-gttcattgtgagcttgttgaagctaatttcttgtaagccatttgtatctctttgtaag-aacttattgatagtggattggaga 44331662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 62 - 237
Target Start/End: Original strand, 4569895 - 4570069
Alignment:
Q  62 gttgggaaacatttgtaaacacattggatgagt-aaaatcttattgagtctcttgttcttaggaagagattaggaaaatgg-tagaaatcaggttttgtt 159  Q
    ||||| ||||| |||||||||| |||| ||||| ||||||  ||||||| | |||||||| ||  |||||| ||||||||| ||||||| ||| || |||    
T  4569895 gttggaaaacaattgtaaacaccttgggtgagtgaaaatc--attgagtgttttgttctttggt-gagattgggaaaatgggtagaaattagggtt-gtt 4569990  T
Q  160 cttggagagcttattgaaactaatttcttataac-cattt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
    | | | |||||||||||| |||||||||| |||| ||||| |||||||||||||  ||||||||||||||||||||||||    
T  4569991 cattgtgagcttattgaagctaatttcttgtaactcatttgtatctctttgtaag-aactcattgatagtggattggaga 4570069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 140 - 237
Target Start/End: Original strand, 46860494 - 46860591
Alignment:
Q  140 ggtagaaatcaggttttgttcttggagagcttattgaaactaatttcttataacc-attt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
    ||||||||| |||||| |||||| | |||||| ||||| |||||||||| ||||| |||| ||||||||||||| |||||||||||||||||||||||||    
T  46860494 ggtagaaattaggttt-gttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgtaa-taactcattgatagtggattggaga 46860591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 56 - 237
Target Start/End: Original strand, 45095103 - 45095280
Alignment:
Q  56 tcttgggttgggaaacatttgtaaacacattggatgagt-aaaatcttattgagtctcttgttcttaggaagagattaggaaaatggtagaaatcaggtt 154  Q
    ||||||||||||||||||| |||||||| |||| ||||| ||||||  ||||||| |||||||| | ||  |||||| |||||||||||||||| ||| |    
T  45095103 tcttgggttgggaaacatt-gtaaacaccttgg-tgagtgaaaatc--attgagtgtcttgttcattggt-gagattgggaaaatggtagaaattagggt 45095197  T
Q  155 ttgttcttggagagcttattgaaactaatttcttataaccatttt--atctctttgtaaataactcattgatagtggattggaga 237  Q
    | |||||| | || ||| |  || |||||||||| ||||| ||||  ||||||||||||  ||||||||||||||||||||||||    
T  45095198 t-gttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctctttgtaag-aactcattgatagtggattggaga 45095280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 56 - 237
Target Start/End: Original strand, 51398752 - 51398931
Alignment:
Q  56 tcttgggttgggaaacatttgtaaacacattggatgagt-aaaatcttattgagtctcttgttcttaggaagagattaggaaaatgg-tagaaatcaggt 153  Q
    ||||||||||||||| ||| |||||||| |||||||||| ||||||  ||||||| |||||||| | | | |||||| | ||||||| ||||||| |||     
T  51398752 tcttgggttgggaaatatt-gtaaacaccttggatgagtgaaaatc--attgagtgtcttgttcattg-atgagattggaaaaatgggtagaaattaggg 51398847  T
Q  154 tttgttcttggagagcttattgaaactaatttcttataac-cattt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
    || |||||| | || ||| ||||| |||||||||| |||| ||||| |||||||||||||  ||||||||||||||||||||||||    
T  51398848 tt-gttcttagtgaacttgttgaagctaatttcttgtaactcatttgtatctctttgtaag-aactcattgatagtggattggaga 51398931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 39 - 237
Target Start/End: Complemental strand, 51352361 - 51352162
Alignment:
Q  39 gttctcttgaaaggttatcttgggttgggaaacatttgtaaacacattggatgagtaaaa-tctt-attgagtctcttgttcttaggaagagattaggaa 136  Q
    |||||||||| ||||| ||| ||||| | |||||||||||||||| |  ||| ||||||| || | ||||||| |||||||  | ||  |||||||||||    
T  51352361 gttctcttgagaggttctctcgggttagaaaacatttgtaaacacctaagataagtaaaaatcatcattgagtgtcttgtttattggt-gagattaggaa 51352263  T
Q  137 aatggtagaaatcaggttttgttcttggagagcttattgaaactaatttcttataaccattt-tatctctttgtaaataactcattgatagtggattgga 235  Q
    |||| ||||| | ||| ||||||| | | |||||| || ||  ||||||||| ||||||||| ||| ||||||| ||||||||||||| |||||||| ||    
T  51352262 aatgatagaagttagggtttgttcattgtgagctttttaaagttaatttcttgtaaccatttgtatttctttgt-aataactcattgagagtggatttga 51352164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 62 - 237
Target Start/End: Complemental strand, 9666692 - 9666517
Alignment:
Q  62 gttgggaaacatttgtaaacacattggatgagt-aaaatcttattgagtctcttgttcttaggaagagattaggaaaatgg-tagaaatcaggttttgtt 159  Q
    |||||||||||||||||||||| |||| ||||| ||||||  ||||||| |||||||| |  |  |||||| | ||||||| ||||||| || |||||||    
T  9666692 gttgggaaacatttgtaaacaccttgggtgagtgaaaatc--attgagtgtcttgttcatttgt-gagattggaaaaatgggtagaaattagattttgtt 9666596  T
Q  160 cttggagagcttattgaaactaatttcttataac-cattt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
    ||| | |||||| ||||| |||||||||| |||| ||||| || ||||||||||  || || ||||||||||||||||||    
T  9666595 ctttgtgagcttgttgaagctaatttcttgtaactcatttatacctctttgtaag-aattctttgatagtggattggaga 9666517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 39 - 237
Target Start/End: Original strand, 31314366 - 31314562
Alignment:
Q  39 gttctcttgaaaggttatcttgggttgggaaacatttgtaaacacattggatgagt-aaaatcttattgagtctcttgttcttaggaagagattaggaaa 137  Q
    ||||||||||  |||| ||||||||||||||||| |||||||||| |||| ||||| ||||||  ||||||| |||||||| ||||  ||||||  ||||    
T  31314366 gttctcttgaggggttctcttgggttgggaaaca-ttgtaaacactttgggtgagtgaaaatc--attgagtgtcttgttcatagg-tgagattgagaaa 31314461  T
Q  138 at-ggtagaaatcaggttttgttcttggagagcttattgaaactaatttcttataa-ccattt-tatctctttgtaaataactcattgatagtggattgg 234  Q
    || ||||||||| |||  |||||| | | || ||| ||||| |||||||||| ||| |||||| ||||| ||||| || ||||| |||||||||||||||    
T  31314462 atgggtagaaattagg-gttgttcattgtgatcttgttgaagctaatttcttgtaacccatttgtatctttttgt-aagaactctttgatagtggattgg 31314559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 237
Target Start/End: Original strand, 760785 - 760964
Alignment:
Q  56 tcttgggttgggaaacatttgtaaacacattggatgagt-aaaatcttattgagtctcttgttcttaggaagagattaggaaaatgg-tagaaatcaggt 153  Q
    |||||||||||||||||||  ||||||| |||||||||| ||||||  ||||||| |||||||| |  |  |||||| ||||||||| ||||||| ||||    
T  760785 tcttgggttgggaaacatta-taaacaccttggatgagtgaaaatc--attgagtgtcttgttcatttgt-gagattgggaaaatgggtagaaattaggt 760880  T
Q  154 tttgttcttggagagcttattgaaactaatttcttataacc-attt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
     | |||||| | |||||| || || |||||||||| ||||| |||| |||| ||||||||  ||||||||||||||||||||||||    
T  760881 ct-gttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatccctttgtaag-aactcattgatagtggattggaga 760964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 237
Target Start/End: Complemental strand, 5236686 - 5236507
Alignment:
Q  56 tcttgggttgggaaacatttgtaaacacattggatgagt-aaaatcttattgagtctcttgttcttaggaagagattaggaaaat-ggtagaaatcaggt 153  Q
    ||||||||||||||||| |||||||||| |||| ||||| ||||||  ||||||| |||||||| | ||  |||||| ||||||| ||||||||| |||     
T  5236686 tcttgggttgggaaaca-ttgtaaacaccttgggtgagtgaaaatc--attgagtgtcttgttcattgg-tgagattgggaaaatgggtagaaattagg- 5236592  T
Q  154 tttgttcttggagagcttattgaaactaatttcttataa-ccattt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
     |||||||| | || ||| ||||| |||||||||| ||| |||||| ||||||||||| || |||||||||||| |||||| ||||    
T  5236591 gttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctctttgt-aagaactcattgataatggattcgaga 5236507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 43 - 228
Target Start/End: Complemental strand, 8166702 - 8166516
Alignment:
Q  43 tcttgaaaggttatcttgggttgggaaacatttgtaaacacattggatgagt-aaaatcttattgagtctcttgttcttaggaagagattaggaaaatg- 140  Q
    |||||||||||| ||||| ||||  ||||||||||||||||||||| || || |||||| |   | || |||||||| | |||||||||| |  |||||     
T  8166702 tcttgaaaggttctcttgagttgaaaaacatttgtaaacacattgggtgggtgaaaatcattgagtgtgtcttgttcat-ggaagagatt-gataaatga 8166605  T
Q  141 gtagaaatcaggttttgttcttggagagcttattgaaactaatttcttataaccattt--tatctctttgtaaataactcattgatagtg 228  Q
    |||||||| |||||| |||||||||||| || |||||  |||| |||||||||| |||  |||||||||||||| ||||  |||||||||    
T  8166604 gtagaaattaggttt-gttcttggagagtttgttgaagttaatatcttataacctttttgtatctctttgtaaagaacttgttgatagtg 8166516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 103 - 225
Target Start/End: Original strand, 20937639 - 20937762
Alignment:
Q  103 attgagtctcttgttcttaggaagagattaggaaaat-ggtagaaatcaggttttgttcttggagagcttattgaaactaatttcttataaccattt--t 199  Q
    |||||||||||||||| ||| |||||||  ||||||| ||||||||| | |||| ||| ||||||||||| |||||  ||||||||| ||||| |||  |    
T  20937639 attgagtctcttgttcatagaaagagatc-ggaaaataggtagaaattatgttt-gtttttggagagcttgttgaagttaatttcttgtaacccttttgt 20937736  T
Q  200 atctctttgtaaataactcattgata 225  Q
    ||||||||| ||| ||||||||||||    
T  20937737 atctctttgaaaagaactcattgata 20937762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 126 - 237
Target Start/End: Original strand, 30236130 - 30236242
Alignment:
Q  126 gagattaggaaaatgg-tagaaatcaggttttgttcttggagagcttattgaaactaatttcttataacc-attt-tatctctttgtaaataactcattg 222  Q
    |||||| ||||||||| ||||||| ||| || |||||| | |||||| ||||| |||||||||| ||||| |||| |||||||||||||  |||||||||    
T  30236130 gagattgggaaaatgggtagaaattagggtt-gttctttgtgagcttgttgaagctaatttcttgtaacctatttgtatctctttgtaag-aactcattg 30236227  T
Q  223 atagtggattggaga 237  Q
    |||||||||||||||    
T  30236228 atagtggattggaga 30236242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 126 - 237
Target Start/End: Original strand, 34491217 - 34491329
Alignment:
Q  126 gagattaggaaaatgg-tagaaatcaggttttgttcttggagagcttattgaaactaatttcttataac-cattt-tatctctttgtaaataactcattg 222  Q
    |||||| ||||||||| ||||||| ||| || |||||| | |||||| ||||| |||||||||| |||| ||||| |||||||||||||  |||||||||    
T  34491217 gagattgggaaaatgggtagaaattagggtt-gttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatctctttgtaag-aactcattg 34491314  T
Q  223 atagtggattggaga 237  Q
    |||||||||||||||    
T  34491315 atagtggattggaga 34491329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 56 - 237
Target Start/End: Original strand, 9581221 - 9581399
Alignment:
Q  56 tcttgggttgggaaacatttgtaaacacattggatgagt-aaaatcttattgagtctcttgttcttaggaagagattaggaaaatggtagaaatcaggtt 154  Q
    ||||||||||||||||||| |||||||| |||| ||||| ||||||  ||||||| |||||||| |  |  | |||| |||||  ||||||||| |||||    
T  9581221 tcttgggttgggaaacatt-gtaaacaccttgggtgagtgaaaatc--attgagtgtcttgttcatttgtgg-gattcggaaatgggtagaaattaggtt 9581316  T
Q  155 ttgttcttggagagcttattgaaactaatttcttataacc-attt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
    | |||||| | |||||| || || |||||||||| ||||| |||| |||| ||||||||  ||||||||||||||||||||||||    
T  9581317 t-gttctttgtgagcttgtttaagctaatttcttttaacccatttgtatccctttgtaag-aactcattgatagtggattggaga 9581399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 39 - 199
Target Start/End: Complemental strand, 37761718 - 37761560
Alignment:
Q  39 gttctcttgaaaggttatcttgggttgggaaacatttgtaaacacattggatgagtaaaatcttattgagtctcttgttcttaggaagagattaggaaaa 138  Q
    |||||||||||||| | || | ||||  ||||||||||||||||| ||||| ||||||| ||  ||| |||||||||||||| | |||||| |  |||||    
T  37761718 gttctcttgaaaggatctcctaggttatgaaacatttgtaaacaccttggacgagtaaattc--attaagtctcttgttcttggaaagagaatgagaaaa 37761621  T
Q  139 tggtagaaatcaggttttgttcttggagagcttattgaaactaatttcttataaccatttt 199  Q
     |||| |||| | | ||||||||| | | |||| || |||||||||| || ||||| ||||    
T  37761620 aggtaaaaattaaggtttgttctttgtgggcttgttaaaactaatttattgtaaccctttt 37761560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 135 - 237
Target Start/End: Complemental strand, 54739107 - 54739004
Alignment:
Q  135 aaaatggtagaaatcaggttttgttcttggagagcttattgaaactaatttcttataaccattttat--ctctttgtaaataactcattgatagtggatt 232  Q
    |||||||||||||| ||  ||||||||| | |||||| ||||||||||||| |  ||||  ||||||  |||| |||||| |||||||||||||||||||    
T  54739107 aaaatggtagaaattagtgtttgttctttgtgagcttgttgaaactaatttatg-taactcttttatatctctctgtaaagaactcattgatagtggatt 54739009  T
Q  233 ggaga 237  Q
    |||||    
T  54739008 ggaga 54739004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 106 - 237
Target Start/End: Original strand, 1683462 - 1683593
Alignment:
Q  106 gagtctcttgttcttaggaagagattaggaaaatggtagaaatcaggttttgttcttggagagcttattgaaactaatttcttataaccatttta-tctc 204  Q
    ||||||||||||| | | || |||||  ||||||||||||||| | |||  |||||| |||||||||||||  |||||||||| || |  ||||| ||||    
T  1683462 gagtctcttgttcatggaaatagattgagaaaatggtagaaattaagttc-gttcttcgagagcttattgatgctaatttcttgtatcgtttttaatctc 1683560  T
Q  205 tttgtaaataactcattgatagtggattggaga 237  Q
    |||||||| |||||||| |||||| | ||||||    
T  1683561 tttgtaaagaactcatttatagtgaagtggaga 1683593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 237
Target Start/End: Complemental strand, 43401965 - 43401852
Alignment:
Q  126 gagattaggaaaatgg-tagaaatcaggttttgttcttggagagcttattgaaactaatttcttataac-catttt--atctctttgtaaataactcatt 221  Q
    |||||| ||||||||| ||||||| ||| || |||||| | |||||| ||||| |||||||||| |||| ||||||  ||||||||||||  ||||||||    
T  43401965 gagattgggaaaatgggtagaaattagggtt-gttctttgtgagcttgttgaagctaatttcttgtaacgcattttttatctctttgtaag-aactcatt 43401868  T
Q  222 gatagtggattggaga 237  Q
    ||||||||||||||||    
T  43401867 gatagtggattggaga 43401852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 56 - 237
Target Start/End: Original strand, 40735321 - 40735500
Alignment:
Q  56 tcttgggttgggaaacatttgtaaacacattggatgagt-aaaatcttattgagtctcttgttcttaggaagagattaggaaaatgg-tagaaatcaggt 153  Q
    ||||||||| ||||||||| |||||||| |||||  ||| ||||||  ||||||| |||||||| | ||  ||||||  |||||||| ||||||| |||     
T  40735321 tcttgggttaggaaacatt-gtaaacaccttggaaaagtgaaaatc--attgagtgtcttgttcattggt-gagattgagaaaatgggtagaaattaggg 40735416  T
Q  154 tttgttcttggagagcttattgaaactaatttcttataaccatttt--atctctttgtaaataactcattgatagtggattggaga 237  Q
    || |||||| | |||||| ||||| ||||||| || |||||| |||  ||||||||||||  ||||||||||||||||||||||||    
T  40735417 tt-gttctttgtgagcttgttgaagctaatttattgtaaccagtttgtatctctttgtaag-aactcattgatagtggattggaga 40735500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 62 - 212
Target Start/End: Complemental strand, 5434102 - 5433951
Alignment:
Q  62 gttgggaaacatttgtaaacacattggatgagt-aaaatcttattgagtctcttgttcttaggaagagattagga--aaatggtagaaatcaggttttgt 158  Q
    ||||||||||| |||||||||| |||| ||||| ||||||  ||||||| |||||||| | ||  |||||| |||  ||||||||||||| ||| |||||    
T  5434102 gttgggaaacaattgtaaacaccttgg-tgagtgaaaatc--attgagtgtcttgttcattggt-gagattgggagaaaatggtagaaattagggtttgt 5434007  T
Q  159 tcttggagagcttattgaaactaatttcttataaccattt--tatctctttgtaaa 212  Q
    |||| | |||||| || || |||||||||| ||||| |||  ||||||||||||||    
T  5434006 tctttgtgagcttgttaaagctaatttcttgtaacccttttatatctctttgtaaa 5433951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 126 - 237
Target Start/End: Complemental strand, 22835165 - 22835053
Alignment:
Q  126 gagattaggaaaatgg-tagaaatcaggttttgttcttggagagcttattgaaactaatttcttataacc-attt-tatctctttgtaaataactcattg 222  Q
    |||||| ||||||||| ||||||| |||||| |||||| | |||||| || || |||||||||| ||||| |||| |||| ||||||||  |||||||||    
T  22835165 gagattgggaaaatgggtagaaattaggttt-gttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatccctttgtaag-aactcattg 22835068  T
Q  223 atagtggattggaga 237  Q
    |||||||||||||||    
T  22835067 atagtggattggaga 22835053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 155 - 237
Target Start/End: Complemental strand, 49199604 - 49199520
Alignment:
Q  155 ttgttcttggagagcttattgaaactaatttcttataacc-atttt--atctctttgtaaataactcattgatagtggattggaga 237  Q
    |||||||| | |||||| ||||| |||||||||| ||||| |||||  ||||||||||||  ||||||||||||||||||||||||    
T  49199604 ttgttctttgtgagcttgttgaagctaatttcttgtaacccattttgtatctctttgtaag-aactcattgatagtggattggaga 49199520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 237
Target Start/End: Original strand, 29810902 - 29810985
Alignment:
Q  155 ttgttcttggagagcttattgaaactaatttcttataacc-attt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
    |||||||| | || ||| ||||| |||||||||| ||||| |||| |||||||||||||  ||||||||||||||||||||||||    
T  29810902 ttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctctttgtaag-aactcattgatagtggattggaga 29810985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 237
Target Start/End: Complemental strand, 43403908 - 43403795
Alignment:
Q  126 gagattaggaaaatgg-tagaaatcaggttttgttcttggagagcttattgaaactaatttcttataac-cat--tttatctctttgtaaataactcatt 221  Q
    |||||| ||||||||| ||||||| ||| || |||||| | |||||| ||||| || ||||||| |||| |||  |||||||||||||||  ||||||||    
T  43403908 gagattgggaaaatgggtagaaattaggctt-gttctttgtgagcttgttgaagctcatttcttgtaactcatgttttatctctttgtaag-aactcatt 43403811  T
Q  222 gatagtggattggaga 237  Q
    ||||||||||||||||    
T  43403810 gatagtggattggaga 43403795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 237
Target Start/End: Original strand, 46173391 - 46173474
Alignment:
Q  155 ttgttcttggagagcttattgaaactaatttcttataacc-attt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
    |||||||| | |||||| ||||| |||||||||| ||||| |||| |||||||||||||  || |||||||||||||||||||||    
T  46173391 ttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgtaag-aattcattgatagtggattggaga 46173474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 237
Target Start/End: Original strand, 54593738 - 54593821
Alignment:
Q  155 ttgttcttggagagcttattgaaactaatttcttataacc-attt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
    |||||||| | |||||| ||||| ||||||| || ||||| |||| |||||||||||||  ||||||||||||||||||||||||    
T  54593738 ttgttctttgtgagcttgttgaagctaatttattgtaacccatttgtatctctttgtaag-aactcattgatagtggattggaga 54593821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 237
Target Start/End: Complemental strand, 19684119 - 19683940
Alignment:
Q  56 tcttgggttgggaaacatttgtaaacacattggatgagt-aaaatcttattgagtctcttgttcttaggaagagattaggaaaatgg-tagaaatcaggt 153  Q
    ||||||||||||||||||| |||||||| |||| ||||| ||||||  ||||| | |||||||| |  |  |||||| ||||||||| ||||||| |||     
T  19684119 tcttgggttgggaaacatt-gtaaacaccttgggtgagtgaaaatc--attgaatgtcttgttcatttgt-gagattgggaaaatgggtagaaattaggg 19684024  T
Q  154 tttgttcttggagagcttattgaaactaatttcttataaccatttt--atctctttgtaaataactcattgatagtggattggaga 237  Q
    || |||||| | || ||| |  || |||||||||| ||||| ||||  ||||||||||||  ||||||||||||||||||||||||    
T  19684023 tt-gttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctctttgtaag-aactcattgatagtggattggaga 19683940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 103 - 231
Target Start/End: Complemental strand, 35138891 - 35138762
Alignment:
Q  103 attgagtctcttgttcttaggaagagattaggaaaatggtagaaatcaggttttgttcttggagagcttattgaaactaatttcttataaccatttt--a 200  Q
    ||||||| |||||||| | | ||||||||  ||||  ||||||||| | |||| |||||||| ||| || |||||  |||||||||  |||  ||||  |    
T  35138891 attgagtgtcttgttcatggaaagagattgagaaatgggtagaaattatgttt-gttcttggtgagtttgttgaagttaatttcttgcaactcttttgta 35138793  T
Q  201 tctctttgtaaataactcattgatagtggat 231  Q
    |||||||||||| ||||||||||||||||||    
T  35138792 tctctttgtaaagaactcattgatagtggat 35138762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 83
Target Start/End: Complemental strand, 2075330 - 2075260
Alignment:
Q  14 tttagggttgagtgtctttg-taaatgttctcttgaaaggttatcttgggttgggaaacatttgtaaacac 83  Q
    |||||||||||| ||||||| | |  ||||| |||| | |||||||||||||||||||||||| |||||||    
T  2075330 tttagggttgagagtctttgattagagttcttttgagaagttatcttgggttgggaaacatttataaacac 2075260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 237
Target Start/End: Complemental strand, 25491103 - 25491018
Alignment:
Q  154 tttgttcttggagagcttattgaaactaatttcttataaccatttt--atctctttgtaaataactcattgatagtggattggaga 237  Q
    ||||||||| |||||||| ||||| || ||||||||||  | ||||  ||||||||||||| || |||||||||||| | ||||||    
T  25491103 tttgttctttgagagcttgttgaagctgatttcttatactccttttgtatctctttgtaaagaaatcattgatagtgaagtggaga 25491018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 199
Target Start/End: Complemental strand, 28253439 - 28253357
Alignment:
Q  117 tcttaggaagagattaggaaaatggtagaaatcaggttttgttcttggagagcttattgaaactaatttcttataaccatttt 199  Q
    |||| ||||||| ||||||||||||||||||| ||| || |||| | | |||||| |||||  ||||||||| |||| |||||    
T  28253439 tctttggaagaggttaggaaaatggtagaaattagggttcgttcattgtgagcttgttgaagttaatttcttgtaacgatttt 28253357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 199
Target Start/End: Original strand, 36796770 - 36796863
Alignment:
Q  105 tgagtctcttgttcttaggaagagattaggaaaatggtagaaatcaggttttgttcttggagagcttattgaaactaatttcttataaccatttt 199  Q
    |||||||||||||| |  |||| ||||  |||| |||||||||| || |||| || ||| ||||||| |||||  ||||||||||||||||||||    
T  36796770 tgagtctcttgttcatgtgaagggattgagaaattggtagaaattag-ttttatttttgaagagcttgttgaacataatttcttataaccatttt 36796863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 135 - 237
Target Start/End: Original strand, 5373247 - 5373351
Alignment:
Q  135 aaaatggtagaaatcaggttttgttcttggagagcttattgaaactaatttcttataaccattttat--ctctttgtaaataactcattgatagtggatt 232  Q
    |||| ||||||||| ||| |||||||||   |||||| ||||| ||||||| || ||||| ||||||  ||||||||||  |||||||||  | ||||||    
T  5373247 aaaagggtagaaattaggctttgttctttttgagcttgttgaagctaatttattgtaacccttttatatctctttgtaaggaactcattgccaatggatt 5373346  T
Q  233 ggaga 237  Q
    |||||    
T  5373347 ggaga 5373351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 237
Target Start/End: Original strand, 7762299 - 7762382
Alignment:
Q  155 ttgttcttggagagcttattgaaactaatttcttataaccatttt--atctctttgtaaataactcattgatagtggattggaga 237  Q
    |||||||| | || ||| ||||| |||||||||| ||||  ||||  ||||||||||||  ||||||||||||||||||||||||    
T  7762299 ttgttctttgtgaacttgttgaagctaatttcttgtaactcttttgtatctctttgtaag-aactcattgatagtggattggaga 7762382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 237
Target Start/End: Complemental strand, 26323251 - 26323124
Alignment:
Q  111 tcttgttcttaggaagagattaggaaaatggtagaaatcaggttttgttcttggagagcttattgaaactaatttcttataaccatttt--atctctttg 208  Q
    |||||||| | ||| ||||||  ||||| |||| |||| |||||| ||| ||| |||| || ||||| |||||||||| ||||| ||||  || |||| |    
T  26323251 tcttgttcatgggatgagattgagaaaagggtaaaaattaggttt-gtttttgaagagtttgttgaagctaatttcttgtaacctttttgtatatcttgg 26323153  T
Q  209 taaataactcattgatagtggattggaga 237  Q
    |||| ||||||||||||||| | ||||||    
T  26323152 taaaaaactcattgatagtgaagtggaga 26323124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 237
Target Start/End: Complemental strand, 9636239 - 9636177
Alignment:
Q  176 aaactaatttcttataaccatttt--atctctttgtaaataactcattgatagtggattggaga 237  Q
    ||||||||||||| ||||| ||||  |||| |||||||  ||||||||||||||||||||||||    
T  9636239 aaactaatttcttgtaacccttttgtatctttttgtaag-aactcattgatagtggattggaga 9636177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 237
Target Start/End: Original strand, 16499075 - 16499146
Alignment:
Q  167 agcttattgaaactaatttcttataacc-attt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
    ||||| ||||| |||||||||| | ||| |||| |||||||||||||  ||||||||||||||||||||||||    
T  16499075 agcttgttgaagctaatttcttgttacccatttatatctctttgtaag-aactcattgatagtggattggaga 16499146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 65; Significance: 1e-28; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 14 - 237
Target Start/End: Complemental strand, 13695964 - 13695741
Alignment:
Q  14 tttagggttgagtgtctttgtaaatgttctcttgaaaggttatcttgggttgggaaacatttgtaaacacattggatgagt-aaaatcttattgagtctc 112  Q
    ||||||||||||||||||||   | |||||||||| ||||| | ||| | ||| |||||||||||||||| |||  ||||| ||||||  ||||||| ||    
T  13695964 tttagggttgagtgtctttggtgaggttctcttgagaggttttattgagctggaaaacatttgtaaacaccttgtgtgagtgaaaatc--attgagtatc 13695867  T
Q  113 ttgttcttaggaagagattaggaaaatggtagaaatcaggttttgttcttggagagcttattgaaactaatttcttataaccattt--tatctctttgta 210  Q
    || ||||| || ||||||| |||||| |||| |||| ||| ||||||||| | |||||| || || |||||||||| ||||| |||  ||||||||||||    
T  13695866 tttttctttgg-agagattgggaaaagggtacaaattagggtttgttctttgtgagcttgttaaagctaatttcttgtaacccttttgtatctctttgta 13695768  T
Q  211 aataactcattgatagtggattggaga 237  Q
    || |||||||| |||||||||| ||||    
T  13695767 aagaactcattaatagtggattagaga 13695741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 56 - 237
Target Start/End: Original strand, 3325851 - 3326031
Alignment:
Q  56 tcttgggttgggaaacatttgtaaacacattggatgagtaaaatcttattgagtctcttgttcttaggaagagattaggaaaatggtagaaatcaggttt 155  Q
    ||||| |||| ||||||||||||||||| |||| ||||| ||| |  |||| || ||||||||||||||||| |||   |||| ||||||||| || |||    
T  3325851 tcttgagttgagaaacatttgtaaacaccttgggtgagtgaaacc--attgggtatcttgttcttaggaagaaattgaaaaaaaggtagaaattag-ttt 3325947  T
Q  156 tgttcttggagagcttattgaaactaatttcttataaccat--tttatctctttgtaaataactcattgatagtggattggaga 237  Q
    |||||||| ||||||| ||||| |||||||||| |||||||  | |||||||||||||| |||||| |||| ||||||| ||||    
T  3325948 tgttcttgaagagcttgttgaagctaatttcttgtaaccattgtgtatctctttgtaaagaactcaatgatggtggattagaga 3326031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 103 - 237
Target Start/End: Complemental strand, 10055001 - 10054867
Alignment:
Q  103 attgagtctcttgttcttaggaagagattaggaaaatggtagaaatcaggttttgttcttggagagcttattgaaactaatttcttataaccattt-tat 201  Q
    ||||||||| |||||| ||| ||||||||  ||||  ||||||||| | |||| ||||||| |||| || ||||| |||||||||||||||| ||| |||    
T  10055001 attgagtctattgttcatagaaagagattgagaaatgggtagaaattatgttt-gttcttgaagagtttgttgaagctaatttcttataaccttttgtat 10054903  T
Q  202 ctctttgtaaataactcattgatagtggattggaga 237  Q
    ||||||||||  ||||||||||||||| ||||||||    
T  10054902 ctctttgtaatgaactcattgatagtgtattggaga 10054867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 134 - 236
Target Start/End: Original strand, 316776 - 316879
Alignment:
Q  134 gaaaatggtagaaatcaggttttgttcttggagagcttattgaaactaatttcttataaccattt--tatctctttgtaaataactcattgatagtggat 231  Q
    ||||| ||||||||| |||||| ||||||||||||||| ||||| |||||||||| ||| | |||  |||||||||||||| |||||||||||| |||||    
T  316776 gaaaaaggtagaaattaggttt-gttcttggagagcttgttgaagctaatttcttgtaatccttttgtatctctttgtaaagaactcattgataatggat 316874  T
Q  232 tggag 236  Q
     ||||    
T  316875 cggag 316879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 56 - 237
Target Start/End: Original strand, 13488141 - 13488320
Alignment:
Q  56 tcttgggttgggaaacatttgtaaacacattggatgagtaaaatcttattgagtctcttgttcttaggaagagattaggaaaatgg-tagaaatcaggtt 154  Q
    ||||||||||| ||||||| |||||||| |||| ||||| |||  ||||||||| |||||||| | || | ||||| ||||||||| ||||||| ||| |    
T  13488141 tcttgggttggaaaacatt-gtaaacaccttgggtgagtgaaaa-ttattgagtgtcttgttcattggta-agattgggaaaatgggtagaaattagggt 13488237  T
Q  155 ttgttcttggagagcttattgaaactaatttcttataacc-attt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
    | |||||| | || ||| ||||| |||||||||| ||||| |||| |||||||||||||  ||||||||||||||||||||||||    
T  13488238 t-gttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctctttgtaag-aactcattgatagtggattggaga 13488320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 155 - 237
Target Start/End: Original strand, 22097898 - 22097980
Alignment:
Q  155 ttgttcttggagagcttattgaaactaatttcttataaccattttatctctttgtaaataactcattgatagtggattggaga 237  Q
    |||||||||||||  || |||||  ||||||||||||||| || ||||| |||||||| ||||||||||||||||||| ||||    
T  22097898 ttgttcttggagaatttgttgaagttaatttcttataacccttgtatctatttgtaaaaaactcattgatagtggattagaga 22097980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 62 - 237
Target Start/End: Original strand, 28278260 - 28278433
Alignment:
Q  62 gttgggaaacatttgtaaacacattggatgagt-aaaatcttattgagtctcttgttcttaggaagagattaggaaaatgg-tagaaatcaggttttgtt 159  Q
    ||||||||||| |||||||||||||||  |||| |||||| |   |||| |||||||| | ||  |||||| ||||||||| ||||||| | | || |||    
T  28278260 gttgggaaacaattgtaaacacattgggagagtgaaaatcat---gagtgtcttgttcattggt-gagattgggaaaatgggtagaaattatggtt-gtt 28278354  T
Q  160 cttggagagcttattgaaactaatttcttataacc-attt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
    ||| | |||||| ||||| |||||||||| ||||| |||| |||||||||||||| ||||||||||||||||||||||||    
T  28278355 ctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgtaaa-aactcattgatagtggattggaga 28278433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 56 - 228
Target Start/End: Original strand, 32579161 - 32579333
Alignment:
Q  56 tcttgggttgggaaacatttgtaaacacattggatgagtaaaatcttattgagtctcttgttcttaggaagagattaggaaaa-tggtagaaatcaggtt 154  Q
    |||||||||| |||| | |||||||||| |||||| ||| |||||  |||||||||||||  |  | ||||||||| || ||| |||| | ||| |||||    
T  32579161 tcttgggttgagaaataattgtaaacaccttggataagtgaaatc--attgagtctcttggccacatgaagagattcggtaaactggttgtaattaggtt 32579258  T
Q  155 ttgttcttggagagcttattgaaactaatttcttataaccat--tttatctctttgtaaataactcattgatagtg 228  Q
    |  || |||||||||||||||||||||||||||| ||||  |  | ||| ||||||||||||||||||||| ||||    
T  32579259 tattt-ttggagagcttattgaaactaatttcttgtaactcttatgtatgtctttgtaaataactcattgaaagtg 32579333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 50 - 237
Target Start/End: Complemental strand, 9049578 - 9049393
Alignment:
Q  50 aggttatcttgggttgggaaacatttgtaaacacattggatgagtaaaatcttattgagtctcttgttc-ttaggaagagattaggaaaatggtagaaat 148  Q
    ||||| |||||  ||||||||||||||||||||| |||| |||||||||  | | ||||| |||||||  ||||   ||| || |||||||| |||||||    
T  9049578 aggttctcttgatttgggaaacatttgtaaacactttgggtgagtaaaaa-tcactgagtgtcttgttgattagt--gagtttgggaaaatgatagaaat 9049482  T
Q  149 caggttttgttcttggagagcttattgaaactaatttcttataaccatttt--atctctttgtaaataactcattgatagtggattggaga 237  Q
     ||  |||||| |||  |||||| ||||| |||||||||| ||||||||||  ||||||||||||  |||||||||| |||||||||||||    
T  9049481 tagtgtttgtttttgt-gagcttgttgaagctaatttcttgtaaccattttgtatctctttgtaag-aactcattgacagtggattggaga 9049393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 237
Target Start/End: Original strand, 25412700 - 25412877
Alignment:
Q  56 tcttgggttgggaaacatttgtaaacacattggatgagt-aaaatcttattgagtctcttgttcttaggaagagattaggaaaatggtagaaatcaggtt 154  Q
    ||||||||||||||||||| |||||||| |||| ||||| ||||||  ||||||| |||||||| | ||  |||||| |||||| ||||||||| ||| |    
T  25412700 tcttgggttgggaaacatt-gtaaacaccttgg-tgagtgaaaatc--attgagtgtcttgttcattggt-gagattgggaaaagggtagaaattagggt 25412794  T
Q  155 ttgttcttggagagcttattgaaactaatttcttataaccatttt--atctctttgtaaataactcattgatagtggattggaga 237  Q
    | |||||| | || ||| |  || |||||||||| ||||| ||||  ||||||||||||  ||||||||||||||||||||||||    
T  25412795 t-gttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctctttgtaag-aactcattgatagtggattggaga 25412877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 78 - 228
Target Start/End: Original strand, 35616129 - 35616278
Alignment:
Q  78 aaacacattggatgagtaaaatcttattgagtctcttgttcttaggaagagattaggaaaatggtagaaatcaggttttgttcttggagagcttattgaa 177  Q
    |||||| |||| ||||| |||||  ||||||||||||||||   ||||||||||  ||||   |||||||| |||||| ||||||||||||||  || ||    
T  35616129 aaacaccttgggtgagtgaaatc--attgagtctcttgttcacgggaagagattgagaaatgagtagaaattaggttt-gttcttggagagctcgtttaa 35616225  T
Q  178 actaatttcttataaccatttt--atctctttgtaaataactcattgatagtg 228  Q
      ||||||||| ||||| ||||  || |||||||||| |||||||||||||||    
T  35616226 gttaatttcttgtaacccttttgtatttctttgtaaagaactcattgatagtg 35616278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 126 - 237
Target Start/End: Original strand, 40147266 - 40147378
Alignment:
Q  126 gagattaggaaaatgg-tagaaatcaggttttgttcttggagagcttattgaaactaatttcttataac-cattt-tatctctttgtaaataactcattg 222  Q
    |||||| ||||||||| ||||||| ||| || |||||| | |||||| ||||| |||||||||| |||| ||||| |||||||||||||  |||||||||    
T  40147266 gagattgggaaaatgggtagaaattagggtt-gttcttcgtgagcttgttgaagctaatttcttgtaactcatttgtatctctttgtaag-aactcattg 40147363  T
Q  223 atagtggattggaga 237  Q
    |||||||||||||||    
T  40147364 atagtggattggaga 40147378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 237
Target Start/End: Complemental strand, 42428660 - 42428481
Alignment:
Q  56 tcttgggttgggaaacatttgtaaacacattggatgagt-aaaatcttattgagtctcttgttcttaggaagagattaggaaaatgg-tagaaatcaggt 153  Q
    ||||||||||||||| ||| |||||||| |||| ||||| ||||||  ||||||| |||||||| | ||  |||||| ||||||||| ||||||| | |     
T  42428660 tcttgggttgggaaatatt-gtaaacaccttgggtgagtgaaaatc--attgagtgtcttgttcattggt-gagattgggaaaatgggtagaaattatgg 42428565  T
Q  154 tttgttcttggagagcttattgaaactaatttcttataacc-attt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
    ||| ||||| | || ||| ||||| |||||||||| ||||| |||| |||||||||||||  ||||||||||||||||||||||||    
T  42428564 ttt-ttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctctttgtaag-aactcattgatagtggattggaga 42428481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 56 - 235
Target Start/End: Original strand, 533707 - 533884
Alignment:
Q  56 tcttgggttgggaaacatttgtaaacacattggatgagt-aaaatcttattgagtctcttgttcttaggaagagattaggaaaatgg-tagaaatcaggt 153  Q
    ||||||||||||||||||| |||||||| |||| ||||| ||||||  |||| || |||||||| | ||  |||||| ||||||||| ||||||| |||     
T  533707 tcttgggttgggaaacatt-gtaaacaccttgggtgagtgaaaatc--attgcgtgtcttgttcattggt-gagattgggaaaatgggtagaaattaggg 533802  T
Q  154 tttgttcttggagagcttattgaaactaatttcttataacc-attt-tatctctttgtaaataactcattgatagtggattgga 235  Q
    || || ||| | |||||| ||||| ||||||| || ||||| |||| |||||||||||||  ||||||||||||||||||||||    
T  533803 ttggt-ctttgtgagcttgttgaagctaattttttgtaacccatttgtatctctttgtaag-aactcattgatagtggattgga 533884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 56 - 237
Target Start/End: Complemental strand, 39468779 - 39468600
Alignment:
Q  56 tcttgggttgggaaacatttgtaaacacattggatgagt-aaaatcttattgagtctcttgttc-ttaggaagagattaggaaaatgg-tagaaatcagg 152  Q
    ||||||||||||||||||| |||||||| |||  ||||| ||||||  ||||||| |||||||| ||||   |||||| ||||||||| ||||||| |||    
T  39468779 tcttgggttgggaaacatt-gtaaacaccttgagtgagtgaaaatc--attgagtgtcttgttcattagt--gagattgggaaaatgggtagaaattagg 39468685  T
Q  153 ttttgttcttggagagcttattgaaactaatttcttataacc-attt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
     || |||||| | || ||| ||||| |||||||||| ||||| |||| |||||||||||||  ||||||||||||||||||| ||||    
T  39468684 gtt-gttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctctttgtaag-aactcattgatagtggattagaga 39468600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 56 - 237
Target Start/End: Original strand, 13239690 - 13239868
Alignment:
Q  56 tcttgggttgggaaacatttgtaaacacattggatgagt-aaaatcttattgagtctcttgttcttaggaagagattag-gaaaatggtagaaatcaggt 153  Q
    ||||||||||||||||| |||||||||| |||| ||||| ||||||  ||||||| |||||||| | ||  |||||| |  |||||||||||||| |||     
T  13239690 tcttgggttgggaaaca-ttgtaaacaccttgg-tgagtgaaaatc--attgagtgtcttgttcattgg-tgagattggaaaaaatggtagaaattaggg 13239784  T
Q  154 tttgttcttggagagcttattgaaactaatttcttataaccattt--tatctctttgtaaataactcattgatagtggattggaga 237  Q
    ||| ||||| | || ||| ||||| |||||||||| ||||  |||  ||||||||||| || ||||||||||||||||||||||||    
T  13239785 ttt-ttctttgtgaacttgttgaagctaatttcttgtaactcttttgtatctctttgt-aagaactcattgatagtggattggaga 13239868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 126 - 237
Target Start/End: Original strand, 213470 - 213582
Alignment:
Q  126 gagattaggaaaatgg-tagaaatcaggttttgttcttggagagcttattgaaactaatttcttataacc-attt-tatctctttgtaaataactcattg 222  Q
    |||||| ||||||||| ||||||| ||| || |||||| | |||||| || || |||||||||| ||||| |||| |||||||||||||  |||||||||    
T  213470 gagattgggaaaatgggtagaaattagggtt-gttctttgtgagcttgttaaagctaatttcttgtaacccatttgtatctctttgtaag-aactcattg 213567  T
Q  223 atagtggattggaga 237  Q
    |||||||||||||||    
T  213568 atagtggattggaga 213582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 179 - 237
Target Start/End: Complemental strand, 31992306 - 31992248
Alignment:
Q  179 ctaatttcttataaccattttatctctttgtaaataactcattgatagtggattggaga 237  Q
    |||||||||| ||||| || ||||| |||||||||||||| ||||||||| ||||||||    
T  31992306 ctaatttcttttaacccttgtatctatttgtaaataactctttgatagtgaattggaga 31992248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 126 - 237
Target Start/End: Original strand, 38747010 - 38747122
Alignment:
Q  126 gagattaggaaaatgg-tagaaatcaggttttgttcttggagagcttattgaaactaatttcttataacc-attt-tatctctttgtaaataactcattg 222  Q
    |||||| ||||||||| ||||||| ||| || |||||| | |||||| ||||| |||||||||| ||||| |||| |||||||||| ||| |||||||||    
T  38747010 gagattgggaaaatgggtagaaattagggtt-gttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttggaaa-aactcattg 38747107  T
Q  223 atagtggattggaga 237  Q
    |||| ||||||||||    
T  38747108 atagaggattggaga 38747122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 233
Target Start/End: Original strand, 33831700 - 33831793
Alignment:
Q  140 ggtagaaatcaggttttgttcttggagagcttattgaaactaatttcttataacc-attt-tatctctttgtaaataactcattgatagtggattg 233  Q
    ||||||||| |||||| |||||| | |||||| || || |||||||||| ||||| |||| |||||||||||||  ||||||||||||||||||||    
T  33831700 ggtagaaattaggttt-gttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatctctttgtaag-aactcattgatagtggattg 33831793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 235
Target Start/End: Complemental strand, 33906160 - 33906083
Alignment:
Q  160 cttggagagcttattgaaactaatttcttataaccatttt--atctctttgtaaataactcattgatagtggattgga 235  Q
    |||||||||||| | ||| |||| ||||| ||| | ||||  ||||||||||||| |||||||||||||| |||||||    
T  33906160 cttggagagcttgtcgaagctaacttcttgtaatccttttgtatctctttgtaaagaactcattgatagtagattgga 33906083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 237
Target Start/End: Original strand, 538070 - 538142
Alignment:
Q  166 gagcttattgaaactaatttcttataacc-attt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
    |||||| ||||| |||||||||| ||||| |||| |||||||||||||  |||||||||||||| |||||||||    
T  538070 gagcttgttgaagctaatttcttgtaacccatttgtatctctttgtaag-aactcattgatagtagattggaga 538142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 135 - 237
Target Start/End: Complemental strand, 10700801 - 10700699
Alignment:
Q  135 aaaatggtagaaatcaggttttgttcttggagagcttattgaaactaatttcttataaccatttt--atctctttgtaaataactcattgatagtggatt 232  Q
    |||| ||||||||| |||||| |||||| |||||||| ||||| |||||| ||||||||  ||||  ||||||||  ||| ||||||||||||||| | |    
T  10700801 aaaaaggtagaaattaggttt-gttcttagagagcttgttgaagctaatt-cttataacatttttgtatctctttaaaaagaactcattgatagtgaagt 10700704  T
Q  233 ggaga 237  Q
    |||||    
T  10700703 ggaga 10700699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 237
Target Start/End: Original strand, 16452125 - 16452197
Alignment:
Q  166 gagcttattgaaactaatttcttataacc-attt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
    |||||| ||||| |||||||||| ||||| |||| |||||||||||||  |||||||| |||||||||||||||    
T  16452125 gagcttgttgaagctaatttcttgtaacccatttgtatctctttgtaag-aactcattcatagtggattggaga 16452197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 65; Significance: 1e-28; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 56 - 228
Target Start/End: Complemental strand, 1050674 - 1050503
Alignment:
Q  56 tcttgggttgggaaacatttgtaaacacattggatgagtaaaatcttattgagtctcttgttcttaggaagagattaggaaaatggtagaaatcaggttt 155  Q
    ||||||||||||||||||||||| |||||||| |||||| |||  |||||||||||||||||| |  ||||||||| |||||  |||  |||| ||| |     
T  1050674 tcttgggttgggaaacatttgtacacacattgaatgagtgaaa--ttattgagtctcttgttcatgtgaagagattgggaaatgggtgaaaattagg-tg 1050578  T
Q  156 tgttcttggagagcttattgaaactaatttcttataaccattt--tatctctttgtaaataactcattgatagtg 228  Q
    ||||||| |||||||||||||| |||||||||| ||||  |||  | |||||||||||||||||| |||||||||    
T  1050577 tgttcttcgagagcttattgaagctaatttcttgtaacatttttgtgtctctttgtaaataactcgttgatagtg 1050503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 111 - 237
Target Start/End: Original strand, 22079307 - 22079434
Alignment:
Q  111 tcttgttcttaggaagagattaggaaaatggtagaaatcaggttttgttcttggagagcttattgaaactaatttcttataaccatttt--atctctttg 208  Q
    |||||||| | |||||||||| | |||||||||||||| | |||| |||||| | |||||| || || |||||||||| ||||||||||  |||||||||    
T  22079307 tcttgttcatgggaagagattggaaaaatggtagaaattatgttt-gttctttgtgagcttgttaaagctaatttcttgtaaccattttgtatctctttg 22079405  T
Q  209 taaataactcattgatagtggattggaga 237  Q
    |||| |||||||||||| |||||||||||    
T  22079406 taaagaactcattgatattggattggaga 22079434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 56 - 237
Target Start/End: Complemental strand, 928208 - 928027
Alignment:
Q  56 tcttgggttgggaaacatttgtaaacacattggatgagt-aaaatcttattgagtctcttgttcttaggaagagattag-gaaaatggtagaaatcaggt 153  Q
    |||||||||||||||||||||||||||| |||| ||||| ||||||  | ||||| |||||||||| ||  || ||| |  |||||| ||||||| |||     
T  928208 tcttgggttgggaaacatttgtaaacaccttgggtgagtgaaaatc--aatgagtgtcttgttctttgg-tgatattggaaaaaatgatagaaattaggg 928112  T
Q  154 tttgttcttggagagcttattgaaactaatttcttataaccatttt--atctctttgtaaataactcattgatagtggattggaga 237  Q
    ||||||||| | |||||| ||||| |||||||||| ||||| ||||  ||||||||||||| |||||||| |||||||||| ||||    
T  928111 tttgttctttgtgagcttgttgaagctaatttcttgtaacccttttggatctctttgtaaa-aactcattaatagtggattagaga 928027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 101 - 237
Target Start/End: Original strand, 6808427 - 6808570
Alignment:
Q  101 ttattgagtctcttgttcttaggaagagattaggaaaatggtagaaatcaggttt-----tgttcttggagagcttattgaaactaatttcttataacca 195  Q
    ||||||||| |||||||| |  | |||||||||| ||||||||||||| ||| ||     |||||||||||||||| ||||| |||| ||||| ||||      
T  6808427 ttattgagtgtcttgttcatgagtagagattagggaaatggtagaaattaggattaggtttgttcttggagagcttgttgaagctaacttcttgtaactc 6808526  T
Q  196 tttt--atctctttgtaaataactcattgatagtggattggaga 237  Q
    ||||  ||||||||||||| |||||||| |||||||||||||||    
T  6808527 ttttgtatctctttgtaaagaactcatttatagtggattggaga 6808570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 56 - 237
Target Start/End: Complemental strand, 23555495 - 23555316
Alignment:
Q  56 tcttgggttgggaaacatttgtaaacacattggatgagtaaaatcttattgagtctcttgttcttaggaagagattaggaaaatgg-tagaaatcaggtt 154  Q
    ||||||||||||||||||| |||||||| |||| ||| | |||  ||||||||| |||| ||||| ||  |||||| | ||||||| ||||||| ||| |    
T  23555495 tcttgggttgggaaacatt-gtaaacaccttgggtgaatgaaaa-ttattgagtgtcttattctttggt-gagattggaaaaatgggtagaaattagggt 23555399  T
Q  155 ttgttcttggagagcttattgaaactaatttcttataac-cattt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
    | |||||| | || ||| ||||||||||||||||||||| ||||| |||||||||||||  ||||||||||||||||||||||||    
T  23555398 t-gttctttgtgaacttgttgaaactaatttcttataactcatttgtatctctttgtaag-aactcattgatagtggattggaga 23555316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 14 - 237
Target Start/End: Complemental strand, 28265826 - 28265605
Alignment:
Q  14 tttagggttgagtgtctttgtaaatgttctcttgaaaggttatcttgggttgggaaacatttgtaaacacattggatgagt-aaaatcttattgagtctc 112  Q
    |||||||||||| |||||||   | ||||||||||  |||| |||| |||||||||||| |||||||||| |||| ||||| ||||||  ||||||| ||    
T  28265826 tttagggttgagggtctttgattaggttctcttgaggggttctcttaggttgggaaaca-ttgtaaacaccttgggtgagtgaaaatc--attgagtgtc 28265730  T
Q  113 ttgttcttaggaagagattaggaaaat-ggtagaaatcaggttttgttcttggagagcttattgaaactaatttcttataa-ccattt-tatctctttgt 209  Q
    |||||| | ||  |||||| ||||||| ||||||||| |||  |||||| | | |||||| ||||| |||||||||| ||| |||||| |||||||||||    
T  28265729 ttgttcattgg-cgagattgggaaaataggtagaaattagg-gttgttcattgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgt 28265632  T
Q  210 aaataactcattgatagtggattggaga 237  Q
     || ||||| ||||||||||||||||||    
T  28265631 -aagaactctttgatagtggattggaga 28265605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 38 - 199
Target Start/End: Complemental strand, 8871295 - 8871138
Alignment:
Q  38 tgttctcttgaaaggttatcttgggttgggaaacatttgtaaacacattggatgag-taaaatcttattgagtctcttgttcttaggaagagattaggaa 136  Q
    |||| |||||||||||||||||||||||| |||  ||||||||||| |||||||||  |||||| |    ||| ||||||||||  |  |||||| ||||    
T  8871295 tgttttcttgaaaggttatcttgggttggaaaatgtttgtaaacaccttggatgagcgaaaatcat----agtgtcttgttcttttg-tgagatttggaa 8871201  T
Q  137 aatggtagaaatcaggttttgttcttggagagcttattgaaactaatttcttataaccatttt 199  Q
    |||||||||||| ||| ||||||||| | ||| |  ||||| |||||||||| ||||||||||    
T  8871200 aatggtagaaattagggtttgttctttgtgagttcgttgaagctaatttcttgtaaccatttt 8871138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 14 - 237
Target Start/End: Complemental strand, 50167448 - 50167226
Alignment:
Q  14 tttagggttgagtgtctttg-taaatgttctcttgaaaggttatcttgggttgggaaacatttgtaaacacattggatgagt-aaaatcttattgagtct 111  Q
    |||||||||||| ||||||| | |  ||||||||||  |||| ||||||||||||||||||| |||||||| |||| ||||| ||||||  ||||||| |    
T  50167448 tttagggttgagggtctttgattagggttctcttgaggggttctcttgggttgggaaacatt-gtaaacaccttgggtgagtgaaaatc--attgagtgt 50167352  T
Q  112 cttgttcttaggaagagattaggaaaatg-gtagaaatcaggttttgttcttggagagcttattgaaactaatttcttataacc-attt-tatctctttg 208  Q
    ||||||| | ||  |||||| |||||||  |||||||| ||| || ||| || | |||||| |  || |||||||||| ||||| |||| ||||||||||    
T  50167351 cttgttcattggt-gagattgggaaaattagtagaaattagggtt-gttatttgtgagcttgtcaaagctaatttcttgtaacccatttgtatctctttg 50167254  T
Q  209 taaataactcattgatagtggattggaga 237  Q
    |||| ||||||||||||||||||||||||    
T  50167253 taaa-aactcattgatagtggattggaga 50167226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 56 - 237
Target Start/End: Original strand, 44455098 - 44455277
Alignment:
Q  56 tcttgggttgggaaacatttgtaaacacattggatgagtaaaatcttattgagtctcttgttcttaggaagagattaggaaaatgg-tagaaatcaggtt 154  Q
    ||||||||||||||||||| |||||||| |||| ||||| ||| |  ||||||| |||||||| | ||  |||||| ||||||||| ||||||| ||| |    
T  44455098 tcttgggttgggaaacatt-gtaaacaccttgggtgagtgaaaacc-attgagtgtcttgttcattggt-gagattgggaaaatgggtagaaattagggt 44455194  T
Q  155 ttgttcttggagagcttattgaaactaatttcttataac-cattt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
    | |||||| | || ||| |||||||||||||||| |||| ||||| ||||| |||||||  ||||||||||||||||||||||||    
T  44455195 t-gttctttgtgaacttgttgaaactaatttcttgtaactcatttgtatctttttgtaag-aactcattgatagtggattggaga 44455277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 109 - 237
Target Start/End: Original strand, 13938126 - 13938255
Alignment:
Q  109 tctcttgttcttaggaagagattaggaaaatggtagaaatcaggttttgttcttggagagcttattgaaactaatttcttataaccatttt---atctct 205  Q
    |||||||||| | |||||||||| |||||  ||||||||| |||||  ||||||||||| ||| |  ||  ||||||||| ||||| ||||   ||||||    
T  13938126 tctcttgttcgtgggaagagattgggaaatgggtagaaattaggtt--gttcttggagaacttgtaaaatataatttcttgtaaccttttttgtatctct 13938223  T
Q  206 ttgtaaataactcattgatagtggattggaga 237  Q
    ||||||  ||||||||||||||||||||||||    
T  13938224 ttgtaagaaactcattgatagtggattggaga 13938255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 78 - 227
Target Start/End: Complemental strand, 4535688 - 4535541
Alignment:
Q  78 aaacacattggatgagtaaaatcttattgagtctcttgttcttaggaagagattaggaaaatggtagaaatcaggttttgttcttggagagcttattgaa 177  Q
    ||||||||||| ||||| |||||  |||||| |||||||||  || ||||||||  | || |||||||||| | |||| |||||||||||||||||||||    
T  4535688 aaacacattgggtgagtgaaatc--attgag-ctcttgttcaaagtaagagattgcggaattggtagaaattaagttt-gttcttggagagcttattgaa 4535593  T
Q  178 actaatttcttataaccatttt--atctctttgtaaataactcattgatagt 227  Q
       |||||||| ||||  ||||  ||||||||||||| ||||||||||||||    
T  4535592 gtcaatttcttgtaacatttttgtatctctttgtaaagaactcattgatagt 4535541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 56 - 237
Target Start/End: Complemental strand, 37282922 - 37282742
Alignment:
Q  56 tcttgggttgggaaacatttgtaaacacattggatgagtaaaatcttattgagtctcttgttcttaggaagagattaggaaaatggtagaaatcaggttt 155  Q
    ||||||||||| |||| ||| ||||||| ||| |||||| ||| |  ||||||| |||||||| | ||| |||||| | ||||||||| |||| ||| ||    
T  37282922 tcttgggttggaaaacttttttaaacaccttgtatgagtgaaaacc-attgagtgtcttgttcattgga-gagatt-gaaaaatggtataaattagggtt 37282826  T
Q  156 tgttcttggagagcttattgaaactaatttcttataaccatttt--atctctttgtaaataactcattgatagtggattggaga 237  Q
    ||||| | | |||||| ||||| ||||||| |  ||||| ||||  ||||||||||||| ||||||||  ||||||||||||||    
T  37282825 tgttccttgtgagcttgttgaagctaatttatggtaacccttttgcatctctttgtaaagaactcattagtagtggattggaga 37282742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 51 - 233
Target Start/End: Complemental strand, 2263214 - 2263029
Alignment:
Q  51 ggttatcttgggttgggaaacatttgtaaacacattggatgagtaaaatcttattgagtctcttgttcttaggaagagattaggaaaatggtagaaatca 150  Q
    |||| ||||| ||| ||||| |||||||||||  ||||  |||| |||||  ||||||||| ||| |||| | |||||||| |||||| ||||||||  |    
T  2263214 ggttctcttgagttaggaaatatttgtaaacatcttggtcgagtgaaatc--attgagtcttttgctctttgaaagagattgggaaaaaggtagaaagta 2263117  T
Q  151 gg---ttttgttcttggagagcttattgaaactaatttcttataaccattt--tatctctttgtaaataactcattgatagtggattg 233  Q
     |   |||| ||||||| |||||| |||||  ||||||||| ||||| |||  ||||| |||||||| |||| |||||||||||||||    
T  2263116 agttttttttttcttggtgagcttgttgaagataatttcttgtaacccttttatatctttttgtaaagaacttattgatagtggattg 2263029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 109 - 228
Target Start/End: Complemental strand, 16914355 - 16914234
Alignment:
Q  109 tctcttgttcttaggaagagattaggaaaatggtagaaatcaggttttgttcttggagagcttattgaaactaa-tttcttataaccatttt--atctct 205  Q
    |||||||||| | |||||||||| |||||  |||| |||| | |||| ||||||||||||| | ||||| |||| |||||| ||||| ||||  ||||||    
T  16914355 tctcttgttcatgggaagagattgggaaatgggtaaaaattatgttt-gttcttggagagcctgttgaagctaagtttcttctaacccttttgtatctct 16914257  T
Q  206 ttgtaaataactcattgatagtg 228  Q
    ||||||| |||||||||||||||    
T  16914256 ttgtaaagaactcattgatagtg 16914234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 237
Target Start/End: Complemental strand, 8551017 - 8550838
Alignment:
Q  56 tcttgggttgggaaacatttgtaaacacattggatgagt-aaaatcttattgagtctcttgttcttaggaagagattaggaaaatgg-tagaaatcaggt 153  Q
    |||||||||  |||||||| ||||||||||||| ||||| ||||||  ||||||| |||||||| |  |  |||||| ||||||||| ||||||| ||||    
T  8551017 tcttgggttaagaaacatt-gtaaacacattgggtgagtgaaaatc--attgagtgtcttgttcatttgt-gagattgggaaaatgggtagaaattaggt 8550922  T
Q  154 tttgttcttggagagcttattgaaactaatttcttataac-cattt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
    || |||||| | |||||| || || |||||||||| |||| ||||| |||| ||||||||  ||||||||||||||||||||||||    
T  8550921 tt-gttctttgtgagcttgtttaagctaatttcttgtaactcatttgtatccctttgtaag-aactcattgatagtggattggaga 8550838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 126 - 232
Target Start/End: Original strand, 41360919 - 41361026
Alignment:
Q  126 gagattaggaaaatgg-tagaaatcaggttttgttcttggagagcttattgaaactaatttcttataa-ccattt-tatctctttgtaaataactcattg 222  Q
    |||||| ||||||||| ||||||| |||||| |||||| | |||||| |||||||||||||||| ||| |||||| ||||||||||| || ||||| |||    
T  41360919 gagattgggaaaatgggtagaaattaggttt-gttctttgtgagcttgttgaaactaatttcttgtaacccatttgtatctctttgt-aagaactcgttg 41361016  T
Q  223 atagtggatt 232  Q
    ||||||||||    
T  41361017 atagtggatt 41361026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 167 - 237
Target Start/End: Original strand, 193657 - 193728
Alignment:
Q  167 agcttattgaaactaatttcttataac-cattt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
    ||||| ||||| |||||||||| |||| ||||| ||||||||||||| |||||||||||||||||||||||||    
T  193657 agcttgttgaagctaatttcttgtaactcatttgtatctctttgtaa-taactcattgatagtggattggaga 193728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 155 - 237
Target Start/End: Original strand, 19754529 - 19754612
Alignment:
Q  155 ttgttcttggagagcttattgaaactaatttcttataacc-attt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
    |||||||| | |||||| ||||| |||||||||| ||||| |||| |||||||||||||  ||||||||||||||||||||||||    
T  19754529 ttgttctttgtgagcttgttgaagctaatttcttgtaaccgatttgtatctctttgtaag-aactcattgatagtggattggaga 19754612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 237
Target Start/End: Complemental strand, 37033236 - 37033123
Alignment:
Q  126 gagattaggaaaatgg-tagaaatcaggttttgttcttggagagcttattgaaactaatttcttataa-ccatttt--atctctttgtaaataactcatt 221  Q
    |||||| ||||||||| ||||||| ||| || |||||| | |||||| ||||| |||||||||| ||| |||||||  ||||||||||||  ||||||||    
T  37033236 gagattgggaaaatgggtagaaattagggtt-gttctttgtgagcttgttgaagctaatttcttgtaatccattttgcatctctttgtaag-aactcatt 37033139  T
Q  222 gatagtggattggaga 237  Q
    ||||||||||||||||    
T  37033138 gatagtggattggaga 37033123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 155 - 237
Target Start/End: Complemental strand, 47255474 - 47255391
Alignment:
Q  155 ttgttcttggagagcttattgaaactaatttcttataacc-attt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
    |||||||| | |||||| ||||| |||||||||| ||||| |||| |||||||||||||  ||||||||||||||||||||||||    
T  47255474 ttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgtaag-aactcattgatagtggattggaga 47255391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 233
Target Start/End: Complemental strand, 50169445 - 50169265
Alignment:
Q  51 ggttatcttgggttgggaaacatttgtaaacacattggatgagt-aaaatcttattgagtctcttgttcttaggaagagattaggaaaat-ggtagaaat 148  Q
    |||||||||||||||||||||| ||||||| || |||| ||||| ||||||  ||||||| |||||||| | ||  |||||| | ||||| |||||||||    
T  50169445 ggttatcttgggttgggaaaca-ttgtaaataccttgggtgagtgaaaatc--attgagtgtcttgttcattgg-tgagattggaaaaatgggtagaaat 50169350  T
Q  149 caggttttgttcttggagagcttattgaaactaatttcttataac-cattt-tatctctttgtaaataactcattgatagtggattg 233  Q
     |||  |||||||| | |||||| |  || |||||||||| |||| ||||| ||||||||||||| | |||||||||||||||||||    
T  50169349 tagg-gttgttctttgtgagcttgtcaaagctaatttcttgtaactcatttgtatctctttgtaagt-actcattgatagtggattg 50169265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 56 - 237
Target Start/End: Complemental strand, 834397 - 834218
Alignment:
Q  56 tcttgggttgggaaacatttgtaaacacattggatgagt-aaaatcttattgagtctcttgttcttaggaagagattaggaaaatgg-tagaaatcaggt 153  Q
    ||||||||||||||||||| |||||||| |||| || || ||||||  ||||||| |||||||| |  |  |||||| ||||||||| ||||||| |||     
T  834397 tcttgggttgggaaacatt-gtaaacaccttgggtgcgtgaaaatc--attgagtgtcttgttcatttgt-gagattgggaaaatggatagaaattaggg 834302  T
Q  154 tttgttcttggagagcttattgaaactaatttcttataacc-attt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
    || |||||| | |||||| || || |||||||||| ||||| |||| |||| ||||||||  ||||||||||||||||||||||||    
T  834301 tt-gttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatccctttgtaag-aactcattgatagtggattggaga 834218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 56 - 237
Target Start/End: Original strand, 1833460 - 1833639
Alignment:
Q  56 tcttgggttgggaaacatttgtaaacacattggatgagt-aaaatcttattgagtctcttgttcttaggaagagattaggaaaatgg-tagaaatcaggt 153  Q
    |||||| |||||||||||| |||||||| |||| ||||| ||||||  ||||||| |||||||| | ||  |||||| ||||||||| ||||||| |||     
T  1833460 tcttggattgggaaacatt-gtaaacaccttgggtgagtgaaaatc--attgagtgtcttgttcattggt-gagattgggaaaatgggtagaaattaggg 1833555  T
Q  154 tttgttcttggagagcttattgaaactaatttcttataac-cattt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
    || |||||| | ||   ||||||| |||| ||||| |||| ||||| |||||||||||||  ||||||||||||||||||||||||    
T  1833556 tt-gttctttgtgaatctattgaagctaaattcttgtaactcatttgtatctctttgtaag-aactcattgatagtggattggaga 1833639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 126 - 237
Target Start/End: Original strand, 11348703 - 11348815
Alignment:
Q  126 gagattaggaaaat-ggtagaaatcaggttttgttcttggagagcttattgaaactaatttcttataacc-attt-tatctctttgtaaataactcattg 222  Q
    |||||| ||||||| ||||||||| ||| || |||||| | |||||| ||||| |||||||||| ||||| |||| ||||||||| |||  |||||||||    
T  11348703 gagattgggaaaattggtagaaattagggtt-gttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttctaag-aactcattg 11348800  T
Q  223 atagtggattggaga 237  Q
    |||||||||||||||    
T  11348801 atagtggattggaga 11348815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 126 - 237
Target Start/End: Complemental strand, 13547252 - 13547140
Alignment:
Q  126 gagattaggaaaatgg-tagaaatcaggttttgttcttggagagcttattgaaactaatttcttataacc-attt-tatctctttgtaaataactcattg 222  Q
    |||||| ||||||||| ||||||| ||| || |||||| | |||||| ||||| ||| |||||| ||||| |||| |||||||||||||  |||||||||    
T  13547252 gagattgggaaaatgggtagaaattagggtt-gttctttgtgagcttgttgaagctattttcttgtaacccatttgtatctctttgtaag-aactcattg 13547155  T
Q  223 atagtggattggaga 237  Q
    |||||||||||||||    
T  13547154 atagtggattggaga 13547140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 126 - 237
Target Start/End: Complemental strand, 28220389 - 28220277
Alignment:
Q  126 gagattaggaaaatgg-tagaaatcaggttttgttcttggagagcttattgaaactaatttcttataacc-attt-tatctctttgtaaataactcattg 222  Q
    |||||| ||||||||| ||||||| ||| || |||||| | || ||| ||||| |||||||||| ||||| |||| |||||||||||||  |||||||||    
T  28220389 gagattcggaaaatgggtagaaattagggtt-gttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctctttgtaag-aactcattg 28220292  T
Q  223 atagtggattggaga 237  Q
    |||||||||||||||    
T  28220291 atagtggattggaga 28220277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 56 - 237
Target Start/End: Original strand, 31659176 - 31659355
Alignment:
Q  56 tcttgggttgggaaacatttgtaaacacattggatgagt-aaaatcttattgagtctcttgttcttaggaagagattaggaaaatgg-tagaaatcaggt 153  Q
    ||||||||| ||||||||| |||||||| |||| ||||| ||||||  ||||||| |||||||| | ||  |||||| | ||||||| ||||||| |||     
T  31659176 tcttgggttcggaaacatt-gtaaacaccttgggtgagtgaaaatc--attgagtgtcttgttcattggt-gagattggaaaaatgggtagaaattaggg 31659271  T
Q  154 tttgttcttggagagcttattgaaactaatttcttataacc-attt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
     | |||||| | |||||| ||||| |||||||||| ||||| |||| |||||||||||||  |||| |||||||||||||||||||    
T  31659272 ct-gttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgtaag-aacttattgatagtggattggaga 31659355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 155 - 237
Target Start/End: Complemental strand, 37503688 - 37503608
Alignment:
Q  155 ttgttcttggagagcttattgaaactaatttcttataaccattttatctctttgtaaataactcattgatagtggattggaga 237  Q
    |||||||| | || ||| ||||| |||||||||| ||||| || |||||||||||||  ||||||||||||||||||||||||    
T  37503688 ttgttctttgtgaacttgttgaagctaatttcttgtaacc-ttgtatctctttgtaag-aactcattgatagtggattggaga 37503608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 56 - 237
Target Start/End: Original strand, 49918287 - 49918467
Alignment:
Q  56 tcttgggttgggaaacatttgtaaacacattggatgagt-aaaatcttattgagtctcttgttcttaggaagagattaggaaaatgg-tagaaatcaggt 153  Q
    |||||| ||||||||||||   |||||| |||| ||||| ||||||  ||||||| |||||||| | ||  ||||||  |||||||| ||||||| |||     
T  49918287 tcttggattgggaaacattataaaacaccttgggtgagtgaaaatc--attgagtgtcttgttcattggt-gagattgagaaaatgggtagaaattaggg 49918383  T
Q  154 tttgttcttggagagcttattgaaactaatttcttataacc-attt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
    || |||||| | || ||| ||||| |||||||||| ||||| |||| |||||||||||||  ||||||||||||||||||||||||    
T  49918384 tt-gttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctctttgtaag-aactcattgatagtggattggaga 49918467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 237
Target Start/End: Original strand, 10925161 - 10925343
Alignment:
Q  56 tcttgggttgggaaacatttgtaaacacattggatgagt-aaaatcttattgagtctcttgttcttaggaagagattaggaaaatgg-tagaaatcaggt 153  Q
    ||||||||||||||||||| |||||||| |||| ||||| ||||||  ||||||| |||||||| | ||  ||||||   ||||||| ||||||| | |     
T  10925161 tcttgggttgggaaacatt-gtaaacaccttgggtgagtgaaaatc--attgagtgtcttgttcattggt-gagattgaaaaaatggatagaaattatgg 10925256  T
Q  154 tttgttcttggagagcttattgaaactaatttcttataac-cattt-tatctctttgtaa--ataactcattgatagtggattggaga 237  Q
    || |||||| | |||||| ||||| |||||||||| |||| ||||| |||||||||||||  | || |||||||||||||||||||||    
T  10925257 tt-gttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatctctttgtaagaagaattcattgatagtggattggaga 10925343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 237
Target Start/End: Complemental strand, 31925830 - 31925758
Alignment:
Q  166 gagcttattgaaactaatttcttataacc-attt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
    |||||| ||||| |||||||||| ||||| |||| |||||||||||||  ||||||||||||||||||||||||    
T  31925830 gagcttgttgaagctaatttcttgtaacccatttgtatctctttgtaag-aactcattgatagtggattggaga 31925758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 237
Target Start/End: Original strand, 3156899 - 3156982
Alignment:
Q  155 ttgttcttggagagcttattgaaactaatttcttataacc-attt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
    |||||||| | || ||| ||||| |||||||||| ||||| |||| |||||||||||||  ||||||||||||||||||||||||    
T  3156899 ttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctctttgtaag-aactcattgatagtggattggaga 3156982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 237
Target Start/End: Complemental strand, 9109604 - 9109470
Alignment:
Q  104 ttgagtctcttgttcttaggaagagattaggaaaatggtagaaatcaggttttgttcttggagagcttattgaaactaatttcttataaccatttt--at 201  Q
    |||||| |||||||| | | | ||||||  |||||||| |||||| | ||||| | |||||||| ||| |||||  ||||||||| ||||| ||||  ||    
T  9109604 ttgagtgtcttgttcatggtaggagattgagaaaatggaagaaattaagtttt-tacttggagaacttgttgaagttaatttcttgtaacccttttgtat 9109506  T
Q  202 ctctttgtaaataactcattgatagtggattggaga 237  Q
    ||||||||||| ||| | ||||||||| ||||||||    
T  9109505 ctctttgtaaagaacacgttgatagtgtattggaga 9109470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 237
Target Start/End: Original strand, 19752720 - 19752803
Alignment:
Q  155 ttgttcttggagagcttattgaaactaatttcttataacc-attt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
    |||||||| | |||||| ||||| |||||||||| ||||| |||| |||||||||||||  ||||||||||||| ||||||||||    
T  19752720 ttgttctttgcgagcttgttgaagctaatttcttgtaaccgatttgtatctctttgtaag-aactcattgatagaggattggaga 19752803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 237
Target Start/End: Original strand, 37168302 - 37168415
Alignment:
Q  126 gagattaggaaaatgg-tagaaatcaggttttgttcttggagagcttattgaaactaatttcttataacc-atttt--atctctttgtaaataactcatt 221  Q
    |||||| ||||||||| ||||||| ||| || |||||| | |||||| || || |||||||||| ||||| |||||  ||||||||||||  ||||||||    
T  37168302 gagattgggaaaatgggtagaaattagggtt-gttctttgtgagcttgtttaagctaatttcttgtaacccattttgtatctctttgtaag-aactcatt 37168399  T
Q  222 gatagtggattggaga 237  Q
    ||||||||||||||||    
T  37168400 gatagtggattggaga 37168415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 237
Target Start/End: Original strand, 47115176 - 47115289
Alignment:
Q  126 gagattaggaaaat-ggtagaaatcaggttttgttcttggagagcttattgaaactaatttcttataacc-atttt--atctctttgtaaataactcatt 221  Q
    |||||| ||||||| ||||||||| ||| || |||||| | |||||| || || |||||||||| ||||| |||||  ||||||||||||| ||| ||||    
T  47115176 gagattgggaaaattggtagaaattagggtt-gttctttgtgagcttgtttaagctaatttcttgtaacccattttgtatctctttgtaaa-aacccatt 47115273  T
Q  222 gatagtggattggaga 237  Q
    ||||||||||||||||    
T  47115274 gatagtggattggaga 47115289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 237
Target Start/End: Complemental strand, 13549163 - 13549051
Alignment:
Q  126 gagattaggaaaatgg-tagaaatcaggttttgttcttggagagcttattgaaactaatttcttataacc-attt-tatctctttgtaaataactcattg 222  Q
    |||||| ||||||||| ||||||| ||| || |||||| | |||||| || || |||||||| | ||||| |||| |||||||||||||  |||||||||    
T  13549163 gagattgggaaaatgggtagaaattagggtt-gttctttgtgagcttgttaaacctaatttcatgtaacccatttgtatctctttgtaag-aactcattg 13549066  T
Q  223 atagtggattggaga 237  Q
    |||||||||||||||    
T  13549065 atagtggattggaga 13549051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 237
Target Start/End: Complemental strand, 28223537 - 28223472
Alignment:
Q  173 ttgaaactaatttcttataacc-attt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
    ||||| |||||||||| ||||| |||| |||||||||||||  ||||||||||||||||||||||||    
T  28223537 ttgaagctaatttcttgtaacccatttgtatctctttgtaag-aactcattgatagtggattggaga 28223472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 233
Target Start/End: Complemental strand, 42298138 - 42298030
Alignment:
Q  126 gagattaggaaaat-ggtagaaatcaggttttgttcttggagagcttattgaaactaatttcttataac-cattt-tatctctttgtaaataactcattg 222  Q
    |||||| ||||||| ||||||||| ||| || ||| || | |||||| ||||| |||||||||| |||| ||||| |||||||||||||  |||||||||    
T  42298138 gagattgggaaaattggtagaaattagggtt-gttttttgtgagcttgttgaagctaatttcttgtaactcatttgtatctctttgtaag-aactcattg 42298041  T
Q  223 atagtggattg 233  Q
    |||||||||||    
T  42298040 atagtggattg 42298030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 237
Target Start/End: Complemental strand, 45644510 - 45644405
Alignment:
Q  134 gaaaatgg-tagaaatcaggttttgttcttggagagcttattgaaactaatttcttataac-cattt-tatctctttgtaaataactcattgatagtgga 230  Q
    |||||||| ||||||| | ||||||||||| | |||||| |  || ||||||||||  ||| ||||| |||||||||||||  |||||||||||||||||    
T  45644510 gaaaatggatagaaattaagttttgttctttgtgagcttgtcaaagctaatttcttgcaactcatttgtatctctttgtaag-aactcattgatagtgga 45644412  T
Q  231 ttggaga 237  Q
    |||||||    
T  45644411 ttggaga 45644405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 237
Target Start/End: Complemental strand, 4552873 - 4552688
Alignment:
Q  50 aggttatcttgggttgggaaacatttgtaaacacattggatgagt-aaaatcttattgagtctcttgttcttaggaagagattaggaaaatgg-tagaaa 147  Q
    ||||| |||||||||| |||||||| |||||||| |||| ||||  ||||||  ||||||| |||||||| | ||  ||||||  |||||||| ||||||    
T  4552873 aggttctcttgggttgagaaacatt-gtaaacaccttgggtgagggaaaatc--attgagtgtcttgttcattggt-gagattgagaaaatgggtagaaa 4552778  T
Q  148 tcaggttttgttcttggagagcttattgaaactaatttcttataaccatttt--atctctttgtaaataactcattgatagtggattggaga 237  Q
    | |||||| || ||| | |||||| ||||| |||||||||| |||||  |||  ||| ||||||||  |||||||||||| |||||||||||    
T  4552777 ttaggttt-gtcctttgtgagcttgttgaagctaatttcttgtaacccctttgtatccctttgtaag-aactcattgataatggattggaga 4552688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 237
Target Start/End: Original strand, 5459958 - 5460023
Alignment:
Q  173 ttgaaactaatttcttataaccattt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
    ||||| |||||||||| ||||  ||| ||| |||||||||| |||||||||||||| |||||||||    
T  5459958 ttgaagctaatttcttgtaacattttatatttctttgtaaagaactcattgatagtagattggaga 5460023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 83
Target Start/End: Original strand, 11031303 - 11031336
Alignment:
Q  50 aggttatcttgggttgggaaacatttgtaaacac 83  Q
    ||||| ||||||||||||||||||||||||||||    
T  11031303 aggttctcttgggttgggaaacatttgtaaacac 11031336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 237
Target Start/End: Complemental strand, 12661271 - 12661178
Alignment:
Q  144 gaaatcaggttttgttcttggagagcttattgaaactaatttcttataaccattttatctctttgtaaataactcattgatagtggattggaga 237  Q
    ||||| ||| ||||||||| ||||  || |||||| | | |||||||||||||| ||| |||||||||  ||||| ||| ||||| ||||||||    
T  12661271 gaaattagggtttgttcttagagaatttgttgaaagttaattcttataaccattgtatatctttgtaagaaactctttgttagtgaattggaga 12661178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 237
Target Start/End: Original strand, 16455666 - 16455738
Alignment:
Q  166 gagcttattgaaactaatttcttataacc-attt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
    |||||| ||||| |||||||||| ||||| |||| ||||||| |||||  ||||||||||||||||||||||||    
T  16455666 gagcttgttgaagctaatttcttgtaacccatttgtatctctgtgtaag-aactcattgatagtggattggaga 16455738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 237
Target Start/End: Complemental strand, 13659458 - 13659387
Alignment:
Q  167 agcttattgaaactaatttcttataacc-attt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
    ||||| ||||| |||||||||| | ||| |||| |||||||||||||  ||||||||||||||||||||||||    
T  13659458 agcttgttgaagctaatttcttgttacccatttatatctctttgtaag-aactcattgatagtggattggaga 13659387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 86
Target Start/End: Original strand, 25116537 - 25116565
Alignment:
Q  58 ttgggttgggaaacatttgtaaacacatt 86  Q
    |||||||||||||||||||||||||||||    
T  25116537 ttgggttgggaaacatttgtaaacacatt 25116565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 56 - 228
Target Start/End: Original strand, 24990 - 25162
Alignment:
Q  56 tcttgggttgggaaacatttgtaaacacattggatgagtaaaatcttattgagtctcttgttcttaggaagagattagg-aaaatggtagaaatcaggtt 154  Q
    ||||||||| ||||||| |||||||||| ||||  |||| |||||  ||||||||| ||| ||  | ||  ||||| || |||||||||||||  || ||    
T  24990 tcttgggtttggaaacaattgtaaacaccttgggagagtgaaatc--attgagtctgttgatcacatgacaagattcgggaaaatggtagaaactag-tt 25086  T
Q  155 ttgttcttggagagcttattgaaactaatttcttataaccatttt--atctctttgtaaataactcattgatagtg 228  Q
    |||||||| ||||| || |||||  ||||||||| ||||| ||||  ||||||||||||| |||||||||||||||    
T  25087 ttgttctttgagagtttgttgaaggtaatttcttgtaacctttttgtatctctttgtaaagaactcattgatagtg 25162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 103 - 228
Target Start/End: Complemental strand, 490509 - 490380
Alignment:
Q  103 attgagtctcttgttctt---aggaagagattaggaaaatggtagaaatcaggttttgttcttggagagcttattgaaactaatttcttataaccattt- 198  Q
    |||||||||||||||| |   |||| ||||||  |||||| |||||||| | |||| ||||||||||||||| ||||| |||||||||| ||||  |||     
T  490509 attgagtctcttgttcatgaaaggaggagattgagaaaatcgtagaaattaagttt-gttcttggagagcttgttgaagctaatttcttgtaactctttt 490411  T
Q  199 -tatctctttgtaaataactcattgatagtg 228  Q
     ||| ||||||||||  ||||||||||||||    
T  490410 gtatatctttgtaaagtactcattgatagtg 490380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 237
Target Start/End: Original strand, 434591 - 434650
Alignment:
Q  179 ctaatttcttataaccatttt--atctctttgtaaataactcattgatagtggattggaga 237  Q
    |||||||||| ||||| ||||  ||||||||||||  ||||||||||||||||||||||||    
T  434591 ctaatttcttgtaacccttttgtatctctttgtaag-aactcattgatagtggattggaga 434650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0466 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 155 - 235
Target Start/End: Original strand, 7361 - 7442
Alignment:
Q  155 ttgttcttggagagcttattgaaactaatttcttataacc-attt-tatctctttgtaaataactcattgatagtggattgga 235  Q
    |||||||| | |||||| ||||| |||||||||| ||||| |||| |||||||||||||  ||||||||||||||||||||||    
T  7361 ttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgtaag-aactcattgatagtggattgga 7442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 166 - 237
Target Start/End: Complemental strand, 18126 - 18055
Alignment:
Q  166 gagcttattgaaactaatttcttataac-cattt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
    |||||| ||||| |||||||||| |||| ||||| ||||||||||||||  |||||||||||||||||||||||    
T  18126 gagcttgttgaagctaatttcttgtaactcatttgtatctctttgtaaa--actcattgatagtggattggaga 18055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 237
Target Start/End: Original strand, 11615 - 11674
Alignment:
Q  179 ctaatttcttataac-cattt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
    |||||||||| |||| ||||| |||||||||||||  ||||||||||||||||||||||||    
T  11615 ctaatttcttgtaactcatttgtatctctttgtaag-aactcattgatagtggattggaga 11674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 83
Target Start/End: Complemental strand, 19174 - 19142
Alignment:
Q  51 ggttatcttgggttgggaaacatttgtaaacac 83  Q
    |||| ||||||||||||||||||||||||||||    
T  19174 ggttctcttgggttgggaaacatttgtaaacac 19142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 237
Target Start/End: Complemental strand, 149219 - 149148
Alignment:
Q  167 agcttattgaaactaatttcttataacc-attt-tatctctttgtaaataactcattgatagtggattggaga 237  Q
    ||||| ||||| |||||||||| | ||| |||| |||||||||||||  ||||||||||||||||||||||||    
T  149219 agcttgttgaagctaatttcttgttacccatttatatctctttgtaag-aactcattgatagtggattggaga 149148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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