View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20709_low_21 (Length: 274)
Name: NF20709_low_21
Description: NF20709
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20709_low_21 |
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Alignment Details
Target: chr7 (Bit Score: 259; Significance: 1e-144; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 1 - 263
Target Start/End: Complemental strand, 43487443 - 43487181
Alignment:
| Q |
1 |
tttcataaaaatatttcaaaatgaacagatatgcttaagcaattggtatttgctcttatttgtaggggtcaaagaagctcccaatgtcctatgtgttggc |
100 |
Q |
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| T |
43487443 |
tttcataaaaatatttcaaaatgaacaaatatgcttaagcaattggtatttgctcttatttgtaggggtcaaagaagctcccaatgtcctatgtgttggc |
43487344 |
T |
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| Q |
101 |
aacctattagcttgaaagatcctactgggttggtcatgaattttactcttaacatgaattatatacattatctatgctttagttctttaattagtttatc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43487343 |
aacctattagcttgaaagatcctactgggttggtcatgaattttactcttaacatgaattatatacattatctatgctttagttctttaattagtttatc |
43487244 |
T |
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| Q |
201 |
atgttattaaacttttgcattttacaatagtcaagaattgtttgaggcagtagagcaagagag |
263 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43487243 |
atgttattaaacttttgcattttacaatagtcaagaattgtttgaggcagtagagcaagagag |
43487181 |
T |
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