View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF2070_low_11 (Length: 213)
Name: NF2070_low_11
Description: NF2070
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2070_low_11 |
 | |
|
| [»] chr3 (5 HSPs) |
| |
|
| [»] scaffold0199 (1 HSPs) |
| |
|
| [»] chr8 (2 HSPs) |
| |
|
| [»] chr6 (30 HSPs) |
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| [»] scaffold0288 (1 HSPs) |
| |
|
| [»] scaffold0475 (1 HSPs) |
| |
|
| [»] chr7 (1 HSPs) |
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|
Alignment Details
Target: chr3 (Bit Score: 164; Significance: 8e-88; HSPs: 5)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 164; E-Value: 8e-88
Query Start/End: Original strand, 2 - 213
Target Start/End: Original strand, 1282754 - 1282965
Alignment:
| Q |
2 |
ttgactaacatcaccgtctccttctagtgttgttagaccatctgggattgtttcgaagctaaaatcagtcaaaccatctaaggcatttggacctcttgat |
101 |
Q |
| |
|
||||||||||||||| || |||||||||| |||||||||||||||||| ||||| |||||||||||||| |||||||||| ||||||||||||||||||| |
|
|
| T |
1282754 |
ttgactaacatcaccatcaccttctagtgatgttagaccatctgggatggtttcaaagctaaaatcagtgaaaccatctagggcatttggacctcttgat |
1282853 |
T |
|
| Q |
102 |
ttgagcaagcgtttgtgattgtattcagtgttaacaaaggttatgtgaaagcctctaaggtgaagaagctttgctagtttgaacaatggattgatatggc |
201 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||| || ||||||||||||||||||||||||||||||| |
|
|
| T |
1282854 |
ttgagcaagcgtttgtgattgtattcagtattaacaaaggttatgtaaaagcctctaaggtgaagtagttttgctagtttgaacaatggattgatatggc |
1282953 |
T |
|
| Q |
202 |
cttgaactggat |
213 |
Q |
| |
|
||||| |||||| |
|
|
| T |
1282954 |
cttgagctggat |
1282965 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 151
Target Start/End: Original strand, 35776276 - 35776316
Alignment:
| Q |
111 |
cgtttgtgattgtattcagtgttaacaaaggttatgtgaaa |
151 |
Q |
| |
|
|||||||| ||| |||||||||| ||||||||||||||||| |
|
|
| T |
35776276 |
cgtttgtggttgaattcagtgttcacaaaggttatgtgaaa |
35776316 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 151
Target Start/End: Original strand, 35842083 - 35842123
Alignment:
| Q |
111 |
cgtttgtgattgtattcagtgttaacaaaggttatgtgaaa |
151 |
Q |
| |
|
|||||||| ||| |||||||||| ||||||||||||||||| |
|
|
| T |
35842083 |
cgtttgtggttgaattcagtgttcacaaaggttatgtgaaa |
35842123 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 151
Target Start/End: Original strand, 35854591 - 35854631
Alignment:
| Q |
111 |
cgtttgtgattgtattcagtgttaacaaaggttatgtgaaa |
151 |
Q |
| |
|
|||||||| ||| |||||||||| ||||||||||||||||| |
|
|
| T |
35854591 |
cgtttgtggttgaattcagtgttcacaaaggttatgtgaaa |
35854631 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 151
Target Start/End: Original strand, 35869200 - 35869240
Alignment:
| Q |
111 |
cgtttgtgattgtattcagtgttaacaaaggttatgtgaaa |
151 |
Q |
| |
|
|||||||| ||| |||||||||| ||||||||||||||||| |
|
|
| T |
35869200 |
cgtttgtggttgaattcagtgttcacaaaggttatgtgaaa |
35869240 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0199 (Bit Score: 144; Significance: 7e-76; HSPs: 1)
Name: scaffold0199
Description:
Target: scaffold0199; HSP #1
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 2 - 213
Target Start/End: Original strand, 1079 - 1290
Alignment:
| Q |
2 |
ttgactaacatcaccgtctccttctagtgttgttagaccatctgggattgtttcgaagctaaaatcagtcaaaccatctaaggcatttggacctcttgat |
101 |
Q |
| |
|
||||||||||||||| || |||||||||| |||||||||||||||||| ||||| |||||||||||||| |||||||| |||||| |||||||||||||| |
|
|
| T |
1079 |
ttgactaacatcaccatcaccttctagtggtgttagaccatctgggatggtttcaaagctaaaatcagtgaaaccatccaaggcagttggacctcttgat |
1178 |
T |
|
| Q |
102 |
ttgagcaagcgtttgtgattgtattcagtgttaacaaaggttatgtgaaagcctctaaggtgaagaagctttgctagtttgaacaatggattgatatggc |
201 |
Q |
| |
|
|||||||| ||||||||||||||||||||||| ||| |||||| ||| ||||||||||||||| ||| ||||||||||||||||||||||||||||||| |
|
|
| T |
1179 |
ttgagcaaacgtttgtgattgtattcagtgttgacataggttacatgagagcctctaaggtgaataagttttgctagtttgaacaatggattgatatggc |
1278 |
T |
|
| Q |
202 |
cttgaactggat |
213 |
Q |
| |
|
||||| |||||| |
|
|
| T |
1279 |
cttgagctggat |
1290 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 144; Significance: 7e-76; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 2 - 213
Target Start/End: Original strand, 1675842 - 1676053
Alignment:
| Q |
2 |
ttgactaacatcaccgtctccttctagtgttgttagaccatctgggattgtttcgaagctaaaatcagtcaaaccatctaaggcatttggacctcttgat |
101 |
Q |
| |
|
||||||||||||||| || |||||||||| |||||||||||||||||| ||||| |||||||||||||| |||||||| |||||| |||||||||||||| |
|
|
| T |
1675842 |
ttgactaacatcaccatcaccttctagtggtgttagaccatctgggatggtttcaaagctaaaatcagtgaaaccatccaaggcagttggacctcttgat |
1675941 |
T |
|
| Q |
102 |
ttgagcaagcgtttgtgattgtattcagtgttaacaaaggttatgtgaaagcctctaaggtgaagaagctttgctagtttgaacaatggattgatatggc |
201 |
Q |
| |
|
|||||||| ||||||||||||||||||||||| ||| |||||| ||| ||||||||||||||| ||| ||||||||||||||||||||||||||||||| |
|
|
| T |
1675942 |
ttgagcaaacgtttgtgattgtattcagtgttgacataggttacatgagagcctctaaggtgaataagttttgctagtttgaacaatggattgatatggc |
1676041 |
T |
|
| Q |
202 |
cttgaactggat |
213 |
Q |
| |
|
||||| |||||| |
|
|
| T |
1676042 |
cttgagctggat |
1676053 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 57 - 213
Target Start/End: Complemental strand, 20862562 - 20862406
Alignment:
| Q |
57 |
aagctaaaatcagtcaaaccatctaaggcatttggacctcttgatttgagcaagcgtttgtgattgtattcagtgttaacaaaggttatgtgaaagcctc |
156 |
Q |
| |
|
|||| ||| ||||| |||||||| |||| ||||||| |||| || |||||||||||||||||||||||||| || ||||| ||||||| |||||||| |
|
|
| T |
20862562 |
aagcgaaagtcagtgaaaccatcaaagggtattggacccattgacttaagcaagcgtttgtgattgtattcagtattgacaaatgttatgtaaaagcctc |
20862463 |
T |
|
| Q |
157 |
taaggtgaagaagctttgctagtttgaacaatggattgatatggccttgaactggat |
213 |
Q |
| |
|
|||||||||| || ||||||||||| |||| |||||||||||| ||||||| ||||| |
|
|
| T |
20862462 |
taaggtgaagtagttttgctagttttaacattggattgatatgaccttgaagtggat |
20862406 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 137; Significance: 1e-71; HSPs: 30)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 4618621 - 4618833
Alignment:
| Q |
1 |
cttgactaacatcaccgtctccttctagtgttgttagaccatctgggattgtttcgaagctaaaatcagtcaaaccatctaaggcatttggacctcttga |
100 |
Q |
| |
|
|||||||||||||||| || ||||| | || ||||| ||||||||| || | || ||| |||| || || |||||||| || || |||||||||||||| |
|
|
| T |
4618621 |
cttgactaacatcaccatcaccttccattggtgttaaaccatctggaatgctctcaaagttaaagtccgtgaaaccatcaaaagcctttggacctcttga |
4618720 |
T |
|
| Q |
101 |
tttgagcaagcgtttgtgattgtattcagtgttaacaaaggttatgtgaaagcctctaaggtgaagaagctttgctagtttgaacaatggattgatatgg |
200 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4618721 |
tttgagcaagcgtttgtgattgtattcggtgttaacaaaggttatgtgaaagcctctaaggtgaagaagctttgctagtttgaacaatggattgatatgg |
4618820 |
T |
|
| Q |
201 |
ccttgaactggat |
213 |
Q |
| |
|
||||||||||||| |
|
|
| T |
4618821 |
ccttgaactggat |
4618833 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 4594330 - 4594541
Alignment:
| Q |
1 |
cttgactaacatcaccgtctccttctagtgttgttagaccatctgggattgtttcgaagctaaaatcagtcaaaccatctaaggcatttggacctcttga |
100 |
Q |
| |
|
|||||||||||||||| || ||||| | || ||||||||||||||| || ||||| ||||||||| ||| ||||||||||||||||||||||||||||| |
|
|
| T |
4594330 |
cttgactaacatcaccatcaccttccattggtgttagaccatctggtatggtttcaaagctaaaaccagggaaaccatctaaggcatttggacctcttga |
4594429 |
T |
|
| Q |
101 |
tttgagcaagcgtttgtgattgtattcagtgttaacaaaggttatgtgaaagcctctaaggtgaagaagctttgctagtttgaacaatggattgatatgg |
200 |
Q |
| |
|
||||||||| ||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||| ||||| |
|
|
| T |
4594430 |
tttgagcaaacgtttatgattgtattcagtgttgacaaaggttatgtgaaatcctctaaggtgaagaagttttgcaagtttgaacaatggatttatatgt |
4594529 |
T |
|
| Q |
201 |
ccttgaactgga |
212 |
Q |
| |
|
||||||| |||| |
|
|
| T |
4594530 |
ccttgaagtgga |
4594541 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 4623627 - 4623839
Alignment:
| Q |
1 |
cttgactaacatcaccgtctccttctagtgttgttagaccatctgggattgtttcgaagctaaaatcagtcaaaccatctaaggcatttggacctcttga |
100 |
Q |
| |
|
|||||||||||||||| || ||||| | || ||||| ||||||||| || || || ||| |||| || || |||||||| ||||| |||||||||||||| |
|
|
| T |
4623627 |
cttgactaacatcaccatcaccttccattggtgttaaaccatctggaatggtctcaaagttaaagtccgtgaaaccatcaaaggcctttggacctcttga |
4623726 |
T |
|
| Q |
101 |
tttgagcaagcgtttgtgattgtattcagtgttaacaaaggttatgtgaaagcctctaaggtgaagaagctttgctagtttgaacaatggattgatatgg |
200 |
Q |
| |
|
||||||||||||||||||||||||||| |||| | |||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
4623727 |
tttgagcaagcgtttgtgattgtattcggtgtgaccaaaggttatgtgaaagcctttaaggtaaagaagctttgctagtttgaacaatggattgatatga |
4623826 |
T |
|
| Q |
201 |
ccttgaactggat |
213 |
Q |
| |
|
||||||||||||| |
|
|
| T |
4623827 |
ccttgaactggat |
4623839 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 33 - 212
Target Start/End: Complemental strand, 4488973 - 4488794
Alignment:
| Q |
33 |
gttagaccatctgggattgtttcgaagctaaaatcagtcaaaccatctaaggcatttggacctcttgatttgagcaagcgtttgtgattgtattcagtgt |
132 |
Q |
| |
|
|||| ||||||||| || || || |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4488973 |
gttaaaccatctggaatagtctcaaagctaaaatcagttaaaccatcaaaggcatttggacctcttgatttgagcaagcgtttgtgattgtattcagtgt |
4488874 |
T |
|
| Q |
133 |
taacaaaggttatgtgaaagcctctaaggtgaagaagctttgctagtttgaacaatggattgatatggccttgaactgga |
212 |
Q |
| |
|
| ||||||||||||||||| |||||||||||||| || ||| ||||||| ||||||| |||||||||||||||||||||| |
|
|
| T |
4488873 |
tgacaaaggttatgtgaaatcctctaaggtgaagtagttttcctagtttcaacaatgcattgatatggccttgaactgga |
4488794 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 4517660 - 4517872
Alignment:
| Q |
1 |
cttgactaacatcaccgtctccttctagtgttgttagaccatctgggattgtttcgaagctaaaatcagtcaaaccatctaaggcatttggacctcttga |
100 |
Q |
| |
|
|||||||||||||||| || ||||||| | |||| ||||||||| || || || ||| |||||||||| |||||||| ||||| |||||||||||||| |
|
|
| T |
4517660 |
cttgactaacatcaccatcgccttctatcggagttaaaccatctggaatagtctcaaaggtaaaatcagtgaaaccatcaaaggcttttggacctcttga |
4517759 |
T |
|
| Q |
101 |
tttgagcaagcgtttgtgattgtattcagtgttaacaaaggttatgtgaaagcctctaaggtgaagaagctttgctagtttgaacaatggattgatatgg |
200 |
Q |
| |
|
||||||||| ||||||||||||||||| ||||| |||||||||||||||||||||||||| |||||||| ||||||||||| ||||| |||||||||||| |
|
|
| T |
4517760 |
tttgagcaaacgtttgtgattgtattcggtgttgacaaaggttatgtgaaagcctctaagatgaagaagttttgctagttttaacaacggattgatatgg |
4517859 |
T |
|
| Q |
201 |
ccttgaactggat |
213 |
Q |
| |
|
||||||| ||||| |
|
|
| T |
4517860 |
ccttgaagtggat |
4517872 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 61 - 206
Target Start/End: Original strand, 4507291 - 4507436
Alignment:
| Q |
61 |
taaaatcagtcaaaccatctaaggcatttggacctcttgatttgagcaagcgtttgtgattgtattcagtgttaacaaaggttatgtgaaagcctctaag |
160 |
Q |
| |
|
|||||||||| |||||||| ||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| |
|
|
| T |
4507291 |
taaaatcagtgaaaccatcaaaggcattttcacctcttgatttgagcaagcgtttgtgattgtattcggtgttaacaaaggttatgtgaaagcctcgaag |
4507390 |
T |
|
| Q |
161 |
gtgaagaagctttgctagtttgaacaatggattgatatggccttga |
206 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
4507391 |
gtgaagaagcttagctagtttgaacaatggattgatatggccttga |
4507436 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 32 - 213
Target Start/End: Original strand, 4603461 - 4603642
Alignment:
| Q |
32 |
tgttagaccatctgggattgtttcgaagctaaaatcagtcaaaccatctaaggcatttggacctcttgatttgagcaagcgtttgtgattgtattcagtg |
131 |
Q |
| |
|
|||||| ||||||||||||||||| |||||||||||||| || || ||||||||||| |||||||||||||||||||| ||||||||||||||||| ||| |
|
|
| T |
4603461 |
tgttagtccatctgggattgtttcaaagctaaaatcagtgaagccgtctaaggcattaggacctcttgatttgagcaaacgtttgtgattgtattcggtg |
4603560 |
T |
|
| Q |
132 |
ttaacaaaggttatgtgaaagcctctaaggtgaagaagctttgctagtttgaacaatggattgatatggccttgaactggat |
213 |
Q |
| |
|
|| ||||||||||||||||| ||||||||||||| || ||||||||||| |||| |||||||||||||||||||| ||||| |
|
|
| T |
4603561 |
ttgacaaaggttatgtgaaatcctctaaggtgaaatagttttgctagtttcaacattggattgatatggccttgaagtggat |
4603642 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 3173323 - 3173535
Alignment:
| Q |
1 |
cttgactaacatcaccgtctccttctagtgttgttagaccatctgggattgtttcgaagctaaaatcagtcaaaccatctaaggcatttggacctcttga |
100 |
Q |
| |
|
|||||||||||||||| || ||||| | || |||| ||||||||| || || || ||| |||||||| | |||||||| |||||||||||||| |||| |
|
|
| T |
3173323 |
cttgactaacatcaccatcaccttccattgaagttaaaccatctggtatagtctcaaagttaaaatcattgaaaccatcaaaggcatttggaccctttga |
3173422 |
T |
|
| Q |
101 |
tttgagcaagcgtttgtgattgtattcagtgttaacaaaggttatgtgaaagcctctaaggtgaagaagctttgctagtttgaacaatggattgatatgg |
200 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| |||||| || ||||||||||| ||||||| |||||||||| |
|
|
| T |
3173423 |
tttgagcaaccgtttgtgattgtattcagtgtttacaaaggttatgtgaaagcctctaaagtgaagtagttttgctagtttcaacaatgcattgatatgg |
3173522 |
T |
|
| Q |
201 |
ccttgaactggat |
213 |
Q |
| |
|
||||||||||||| |
|
|
| T |
3173523 |
ccttgaactggat |
3173535 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 57 - 213
Target Start/End: Original strand, 4558501 - 4558657
Alignment:
| Q |
57 |
aagctaaaatcagtcaaaccatctaaggcatttggacctcttgatttgagcaagcgtttgtgattgtattcagtgttaacaaaggttatgtgaaagcctc |
156 |
Q |
| |
|
|||||||||||||| |||||||| |||||||||||||||||||| |||||||| |||||||| |||||||||||||| ||| ||||||||||||| |||| |
|
|
| T |
4558501 |
aagctaaaatcagtgaaaccatcaaaggcatttggacctcttgacttgagcaaccgtttgtggttgtattcagtgtttacataggttatgtgaaatcctc |
4558600 |
T |
|
| Q |
157 |
taaggtgaagaagctttgctagtttgaacaatggattgatatggccttgaactggat |
213 |
Q |
| |
|
||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
4558601 |
taaggtgaagaagttttgctagtttcaacaatggattgatatggccttgaactggat |
4558657 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 35 - 213
Target Start/End: Complemental strand, 4612492 - 4612314
Alignment:
| Q |
35 |
tagaccatctgggattgtttcgaagctaaaatcagtcaaaccatctaaggcatttggacctcttgatttgagcaagcgtttgtgattgtattcagtgtta |
134 |
Q |
| |
|
|||||||||||| || | || ||| |||||||||| |||||| | ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
4612492 |
tagaccatctggtatagcctcaaaggtaaaatcagtgaaaccaacaaaggcatttggacctcttgatttgagcaagcgtttgtgattgtattcggtgttg |
4612393 |
T |
|
| Q |
135 |
acaaaggttatgtgaaagcctctaaggtgaagaagctttgctagtttgaacaatggattgatatggccttgaactggat |
213 |
Q |
| |
|
|| || ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
4612392 |
acgaatgttatgtgaaagcctctaaggtgaagaagttttgctagtttgattaatggattgatatggccttgaactggat |
4612314 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 4565349 - 4565560
Alignment:
| Q |
1 |
cttgactaacatcaccgtctccttctagtgttgttagaccatctgggattgtttcgaagctaaaatcagtcaaaccatctaaggcatttggacctcttga |
100 |
Q |
| |
|
|||||||||||||||| || ||||||| | ||||||||||||||| || ||||| |||| |||| || |||||||||||||||||||||||||||| |
|
|
| T |
4565349 |
cttgactaacatcaccatcaccttctatcggtgttagaccatctggtatggtttcaaagcaaaaaccacgggaaccatctaaggcatttggacctcttga |
4565448 |
T |
|
| Q |
101 |
tttgagcaagcgtttgtgattgtattcagtgttaacaaaggttatgtgaaagcctctaaggtgaagaagctttgctagtttgaacaatggattgatatgg |
200 |
Q |
| |
|
||| ||||| ||||| ||||||||||||||||| ||||||||||| ||||| ||||||||||||||||| ||||| ||||||||||||||||| ||||| |
|
|
| T |
4565449 |
ttttagcaatcgtttatgattgtattcagtgttgacaaaggttatatgaaatcctctaaggtgaagaagttttgcaagtttgaacaatggatttatatgt |
4565548 |
T |
|
| Q |
201 |
ccttgaactgga |
212 |
Q |
| |
|
||||||| |||| |
|
|
| T |
4565549 |
ccttgaaatgga |
4565560 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 33 - 212
Target Start/End: Original strand, 4575807 - 4575986
Alignment:
| Q |
33 |
gttagaccatctgggattgtttcgaagctaaaatcagtcaaaccatctaaggcatttggacctcttgatttgagcaagcgtttgtgattgtattcagtgt |
132 |
Q |
| |
|
|||| ||||||||| || || || ||| |||| ||||| |||||||| ||||||||| |||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
4575807 |
gttaaaccatctggtatagtctcaaagttaaagtcagtgaaaccatcaaaggcattttcacctcttgatttgagcaaacgtttgtgattgtattcagtgt |
4575906 |
T |
|
| Q |
133 |
taacaaaggttatgtgaaagcctctaaggtgaagaagctttgctagtttgaacaatggattgatatggccttgaactgga |
212 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| || ||||||| ||| ||||||| |||||||||||||||||||||| |
|
|
| T |
4575907 |
taacaaaggttatgtgaaagcctctaaggtgaagcagttttgctattttcaacaatgcattgatatggccttgaactgga |
4575986 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 4627470 - 4627681
Alignment:
| Q |
1 |
cttgactaacatcaccgtctccttctagtgttgttagaccatctgggattgtttcgaagctaaaatcagtcaaaccatctaaggcatttggacctcttga |
100 |
Q |
| |
|
||||| ||||||| || || |||||||||| ||||| ||||||||| || || || ||| |||||||| |||||||| ||||||||| ||||||||| |
|
|
| T |
4627470 |
cttgagtaacatcgccatcaccttctagtggtgttaaaccatctggtatggtctcaaaggtaaaatcatcgaaaccatcaaaggcattttcacctcttga |
4627569 |
T |
|
| Q |
101 |
tttgagcaagcgtttgtgattgtattcagtgttaacaaaggttatgtgaaagcctctaaggtgaagaagctttgctagtttgaacaatggattgatatgg |
200 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | ||||||||| | |||||||||||||||||| |
|
|
| T |
4627570 |
tttgagcaaacgtttgtgattgtattcagtgttgacaaaggttatgtgaaagcctctaaggtgaagtaattttgctagtatcaacaatggattgatatgg |
4627669 |
T |
|
| Q |
201 |
ccttgaactgga |
212 |
Q |
| |
|
||||||| |||| |
|
|
| T |
4627670 |
ccttgaagtgga |
4627681 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 33 - 212
Target Start/End: Complemental strand, 4265833 - 4265654
Alignment:
| Q |
33 |
gttagaccatctgggattgtttcgaagctaaaatcagtcaaaccatctaaggcatttggacctcttgatttgagcaagcgtttgtgattgtattcagtgt |
132 |
Q |
| |
|
|||||||||||||| || || || || |||| ||| | |||||||| | | ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4265833 |
gttagaccatctggtatggtctcaaacttaaagtcactgaaaccatcaagagaatttggacctcttgatttgagcaagcgtttgtgattgtattcagtgt |
4265734 |
T |
|
| Q |
133 |
taacaaaggttatgtgaaagcctctaaggtgaagaagctttgctagtttgaacaatggattgatatggccttgaactgga |
212 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||||| |||| |||||||||| ||||||||||||||||| |||| |
|
|
| T |
4265733 |
tgacaaaggttatgtgaaagcctctaaggtgaagaagctttcctagattgaacaatgcattgatatggccttgaaatgga |
4265654 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 33 - 212
Target Start/End: Original strand, 4586984 - 4587163
Alignment:
| Q |
33 |
gttagaccatctgggattgtttcgaagctaaaatcagtcaaaccatctaaggcatttggacctcttgatttgagcaagcgtttgtgattgtattcagtgt |
132 |
Q |
| |
|
|||| ||||||||| || || || |||||||||||||| ||| |||| |||||||||||| ||||||| || ||||| |||||||||||||||||||||| |
|
|
| T |
4586984 |
gttaaaccatctggaatagtctcaaagctaaaatcagttaaatcatcaaaggcatttggagctcttgacttaagcaaccgtttgtgattgtattcagtgt |
4587083 |
T |
|
| Q |
133 |
taacaaaggttatgtgaaagcctctaaggtgaagaagctttgctagtttgaacaatggattgatatggccttgaactgga |
212 |
Q |
| |
|
| ||||||||||||||||| |||| |||||||||||| || |||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
4587084 |
ttacaaaggttatgtgaaatcctcgaaggtgaagaagtttagctagtttcaacaatggattgatatggccttgaactgga |
4587163 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 57 - 213
Target Start/End: Complemental strand, 4513731 - 4513575
Alignment:
| Q |
57 |
aagctaaaatcagtcaaaccatctaaggcatttggacctcttgatttgagcaagcgtttgtgattgtattcagtgttaacaaaggttatgtgaaagcctc |
156 |
Q |
| |
|
|||| |||||| || |||||||| || ||||| |||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
4513731 |
aagcgaaaatcggtgaaaccatcaaaagcattaggacctcttgatttgagcaaacgtttgtgattgtattcggtgttaacaaaggttatgtgaaagcctc |
4513632 |
T |
|
| Q |
157 |
taaggtgaagaagctttgctagtttgaacaatggattgatatggccttgaactggat |
213 |
Q |
| |
|
|||||||||| || ||||||| | |||||| |||||||||||||||||||| ||||| |
|
|
| T |
4513631 |
taaggtgaagtagttttgctaatctgaacattggattgatatggccttgaagtggat |
4513575 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 33 - 213
Target Start/End: Original strand, 4581366 - 4581546
Alignment:
| Q |
33 |
gttagaccatctgggattgtttcgaagctaaaatcagtcaaaccatctaaggcatttggacctcttgatttgagcaagcgtttgtgattgtattcagtgt |
132 |
Q |
| |
|
|||| ||||||||| || || || ||| ||||||| || |||||||| || || ||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
4581366 |
gttaaaccatctggaatagtctcaaaggtaaaatcggtgaaaccatcaaacgcttttggacctcttgatttgagcaagcgtttgtgattgtattcggtgt |
4581465 |
T |
|
| Q |
133 |
taacaaaggttatgtgaaagcctctaaggtgaagaagctttgctagtttgaacaatggattgatatggccttgaactggat |
213 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||||||||||| | | |||||| ||||||| ||||||| ||||| |
|
|
| T |
4581466 |
tgacaaaggttatgtgaaagcctctaaggtgaagaagctttgctagtgttattaatggagtgatatgtccttgaagtggat |
4581546 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 33 - 212
Target Start/End: Original strand, 4482217 - 4482396
Alignment:
| Q |
33 |
gttagaccatctgggattgtttcgaagctaaaatcagtcaaaccatctaaggcatttggacctcttgatttgagcaagcgtttgtgattgtattcagtgt |
132 |
Q |
| |
|
|||| ||||||||| || ||||| ||| |||||||||| |||||||| ||||| |||||||| |||||||| ||||| ||||||||||||||||| |||| |
|
|
| T |
4482217 |
gttaaaccatctggtatcgtttcaaaggtaaaatcagtgaaaccatcaaaggcttttggaccccttgattttagcaaacgtttgtgattgtattcggtgt |
4482316 |
T |
|
| Q |
133 |
taacaaaggttatgtgaaagcctctaaggtgaagaagctttgctagtttgaacaatggattgatatggccttgaactgga |
212 |
Q |
| |
|
| |||||||||||||||||||||||||||||||| || ||| ||| ||| ||||||| |||||||||||||||| ||||| |
|
|
| T |
4482317 |
tgacaaaggttatgtgaaagcctctaaggtgaagtagttttcctattttcaacaatgcattgatatggccttgagctgga |
4482396 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 36 - 213
Target Start/End: Complemental strand, 4258949 - 4258772
Alignment:
| Q |
36 |
agaccatctgggattgtttcgaagctaaaatcagtcaaaccatctaaggcatttggacctcttgatttgagcaagcgtttgtgattgtattcagtgttaa |
135 |
Q |
| |
|
||||||||| | || || || ||| |||||||| | |||||||| | ||||||| |||||||||||||||||| ||||||||||| ||||||||||| | |
|
|
| T |
4258949 |
agaccatcttgaatagtctcaaaggtaaaatcaatgaaaccatcaacggcattttcacctcttgatttgagcaaacgtttgtgattatattcagtgttga |
4258850 |
T |
|
| Q |
136 |
caaaggttatgtgaaagcctctaaggtgaagaagctttgctagtttgaacaatggattgatatggccttgaactggat |
213 |
Q |
| |
|
|||||||||||||||| ||| ||| |||||||||||| ||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
4258849 |
caaaggttatgtgaaaacctttaaagtgaagaagcttagctagtttgaacaatggattgatatggccttgagctggat |
4258772 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 72 - 213
Target Start/End: Original strand, 4572357 - 4572498
Alignment:
| Q |
72 |
aaaccatctaaggcatttggacctcttgatttgagcaagcgtttgtgattgtattcagtgttaacaaaggttatgtgaaagcctctaaggtgaagaagct |
171 |
Q |
| |
|
|||||||| ||||||||| |||||||||| |||||||| ||||||||||||||||||||||| ||| ||||||||||||| |||||||||||||||| | |
|
|
| T |
4572357 |
aaaccatcaaaggcattttgacctcttgacttgagcaaccgtttgtgattgtattcagtgtttacataggttatgtgaaaacctctaaggtgaagaaatt |
4572456 |
T |
|
| Q |
172 |
ttgctagtttgaacaatggattgatatggccttgaactggat |
213 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
4572457 |
ttgctagttgcaacaatggattgatatggccttgaactggat |
4572498 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 33 - 213
Target Start/End: Original strand, 4569426 - 4569602
Alignment:
| Q |
33 |
gttagaccatctgggattgtttcgaagctaaaatcagtcaaaccatctaaggcatttggacctcttgatttgagcaagcgtttgtgattgtattcagtgt |
132 |
Q |
| |
|
|||| ||||||||| || || || ||| |||||||||| |||||||| ||||| ||||||||||||||||||||||| |||||||||| || |||| |
|
|
| T |
4569426 |
gttaaaccatctggaatagtctcaaaggtaaaatcagtgaaaccatcaaaggcttttggacctcttgatttgagcaaatgtttgtgatt----tcggtgt |
4569521 |
T |
|
| Q |
133 |
taacaaaggttatgtgaaagcctctaaggtgaagaagctttgctagtttgaacaatggattgatatggccttgaactggat |
213 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||| ||||||||||| || |||||||||||||||||||||| ||||| |
|
|
| T |
4569522 |
tgacaaaggttatgtgaaagcctctaaggtgaagaagttttgctagtttcaataatggattgatatggccttgaagtggat |
4569602 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 90 - 212
Target Start/End: Original strand, 4471323 - 4471445
Alignment:
| Q |
90 |
ggacctcttgatttgagcaagcgtttgtgattgtattcagtgttaacaaaggttatgtgaaagcctctaaggtgaagaagctttgctagtttgaacaatg |
189 |
Q |
| |
|
||||||||||| ||||||||| ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
4471323 |
ggacctcttgaattgagcaaggctttgtgattgtattcagtgttgacaaacgttatgtgaaagcctctaaggtgaagaagctttgctagtttcaacaatg |
4471422 |
T |
|
| Q |
190 |
gattgatatggccttgaactgga |
212 |
Q |
| |
|
|||||||||||||||| ||||| |
|
|
| T |
4471423 |
cattgatatggccttgagctgga |
4471445 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 33 - 212
Target Start/End: Original strand, 4562014 - 4562193
Alignment:
| Q |
33 |
gttagaccatctgggattgtttcgaagctaaaatcagtcaaaccatctaaggcatttggacctcttgatttgagcaagcgtttgtgattgtattcagtgt |
132 |
Q |
| |
|
|||| ||||||||| || || || ||| |||| ||||| |||||||| ||||||||| |||||||||||| ||||| |||||||||||||||||||||| |
|
|
| T |
4562014 |
gttaaaccatctggtatagtctcaaagttaaagtcagtgaaaccatcaaaggcattttcacctcttgattt-agcaaacgtttgtgattgtattcagtgt |
4562112 |
T |
|
| Q |
133 |
taacaaaggtt-atgtgaaagcctctaaggtgaagaagctttgctagtttgaacaatggattgatatggccttgaactgga |
212 |
Q |
| |
|
||||||||||| |||||||||||||| |||||||| || ||||||| ||| ||||||| ||||||||| |||||||||||| |
|
|
| T |
4562113 |
taacaaaggtttatgtgaaagcctcttaggtgaagcagttttgctattttcaacaatgcattgatatgaccttgaactgga |
4562193 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 4503101 - 4502943
Alignment:
| Q |
1 |
cttgactaacatcaccgtctccttctagtgttgttagaccatctgggattgtttcgaagctaaaatcagtcaaaccatctaaggcatttggacctcttga |
100 |
Q |
| |
|
|||||||||||||||| || ||||| | | |||| ||||||||| || || || ||| |||||||| | |||||||| |||||||||||||||||||| |
|
|
| T |
4503101 |
cttgactaacatcaccatcaccttccaccggagttaaaccatctggtatggtctcaaaggtaaaatcattgaaaccatcaaaggcatttggacctcttga |
4503002 |
T |
|
| Q |
101 |
tttgagcaagcgtttgtgattgtattcagtgttaacaaaggttatgtgaaagcctctaa |
159 |
Q |
| |
|
||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||| |
|
|
| T |
4503001 |
tttgagcaagcgtttgtgattgtattcggtgttgacaaaggttatgtgaaatcctctaa |
4502943 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 61 - 205
Target Start/End: Original strand, 4462587 - 4462731
Alignment:
| Q |
61 |
taaaatcagtcaaaccatctaaggcatttggacctcttgatttgagcaagcgtttgtgattgtattcagtgttaacaaaggttatgtgaaagcctctaag |
160 |
Q |
| |
|
|||| ||||| |||||||||| | ||| ||||||||||| |||||||||| |||||||||||||||||||| ||||||||||||||||| |||||||| |
|
|
| T |
4462587 |
taaagtcagtgaaaccatctagagaattaggacctcttgaattgagcaagcaattgtgattgtattcagtgttgacaaaggttatgtgaaaacctctaag |
4462686 |
T |
|
| Q |
161 |
gtgaagaagctttgctagtttgaacaatggattgatatggccttg |
205 |
Q |
| |
|
|||||| || ||| ||||||| ||||||| ||||||||||||||| |
|
|
| T |
4462687 |
gtgaagtagttttcctagtttcaacaatgcattgatatggccttg |
4462731 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 7 - 207
Target Start/End: Original strand, 4599489 - 4599689
Alignment:
| Q |
7 |
taacatcaccgtctccttctagtgttgttagaccatctgggattgtttcgaagctaaaatcagtcaaaccatctaag-gcatttggacctcttgatttga |
105 |
Q |
| |
|
|||||||||| || || |||| || |||| ||||||||| || || |||||| ||||||||| ||||||| || | | ||| |||||||||||||||| |
|
|
| T |
4599489 |
taacatcaccatcaccatctattggagttaaaccatctggaatagtctcgaaggaaaaatcagtgaaaccat-tacgagaattaggacctcttgatttga |
4599587 |
T |
|
| Q |
106 |
gcaagcgtttgtgattgtattcagtgttaacaaaggttatgtgaaagcctctaaggtgaagaagctttgctagtttgaacaatggattgatatggccttg |
205 |
Q |
| |
|
||||||||||||||||||| || ||||| || |||||||||| ||| |||||||||||||||| |||||||||||||| ||| ||||||||| ||||| |
|
|
| T |
4599588 |
gcaagcgtttgtgattgtactcggtgttcacgaaggttatgtaaaatcctctaaggtgaagaatctttgctagtttgattaatagattgatatttccttg |
4599687 |
T |
|
| Q |
206 |
aa |
207 |
Q |
| |
|
|| |
|
|
| T |
4599688 |
aa |
4599689 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 73 - 213
Target Start/End: Complemental strand, 4255545 - 4255417
Alignment:
| Q |
73 |
aaccatctaaggcatttggacctcttgatttgagcaagcgtttgtgattgtattcagtgttaacaaaggttatgtgaaagcctctaaggtgaagaagctt |
172 |
Q |
| |
|
||||||| ||||| |||||||||||||||| |||||||||||||||||||||||| ||||| || ||||||| |||| ||||| | || |
|
|
| T |
4255545 |
aaccatcaaaggcttttggacctcttgattcgagcaagcgtttgtgattgtattcggtgttgac------------aaagcctttaagatgaagtaattt |
4255458 |
T |
|
| Q |
173 |
tgctagtttgaacaatggattgatatggccttgaactggat |
213 |
Q |
| |
|
|||||||||||| ||| |||||||||||||||||||||||| |
|
|
| T |
4255457 |
tgctagtttgaataatagattgatatggccttgaactggat |
4255417 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 133
Target Start/End: Complemental strand, 4298271 - 4298174
Alignment:
| Q |
36 |
agaccatctgggattgtttcgaagctaaaatcagtcaaaccatctaaggcatttggacctcttgatttgagcaagcgtttgtgattgtattcagtgtt |
133 |
Q |
| |
|
||||||||||| || || || |||||||| | || |||||||| || || |||||||| ||||||| ||||| | |||||||||||||||| ||||| |
|
|
| T |
4298271 |
agaccatctggaatagtctcaaagctaaagttggtgaaaccatcaaaagcttttggaccccttgattcgagcaggtgtttgtgattgtattcggtgtt |
4298174 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 91 - 126
Target Start/End: Complemental strand, 4483569 - 4483534
Alignment:
| Q |
91 |
gacctcttgatttgagcaagcgtttgtgattgtatt |
126 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||| |
|
|
| T |
4483569 |
gacctcttgatttgagcaaacgtttgtgattgtatt |
4483534 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 155 - 204
Target Start/End: Complemental strand, 4497899 - 4497850
Alignment:
| Q |
155 |
tctaaggtgaagaagctttgctagtttgaacaatggattgatatggcctt |
204 |
Q |
| |
|
|||||||||||| | ||| ||||||| |||||||||||||||||||||| |
|
|
| T |
4497899 |
tctaaggtgaagtaattttcctagtttcaacaatggattgatatggcctt |
4497850 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0288 (Bit Score: 125; Significance: 1e-64; HSPs: 1)
Name: scaffold0288
Description:
Target: scaffold0288; HSP #1
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 33 - 213
Target Start/End: Complemental strand, 2227 - 2047
Alignment:
| Q |
33 |
gttagaccatctgggattgtttcgaagctaaaatcagtcaaaccatctaaggcatttggacctcttgatttgagcaagcgtttgtgattgtattcagtgt |
132 |
Q |
| |
|
|||| |||||| || || || ||||||| |||||||| |||||||| | ||||| |||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
2227 |
gttaaaccatcgggaatagtctcgaagcaaaaatcagcgaaaccatcaagagcattaggacctcttgatttgagcaagcgtttatgattgtattcagtgt |
2128 |
T |
|
| Q |
133 |
taacaaaggttatgtgaaagcctctaaggtgaagaagctttgctagtttgaacaatggattgatatggccttgaactggat |
213 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2127 |
tgacaaaggttatgtgaaagcctctaaggtgaagaagctttgctagtttgaacaatggattgatatggccttgaactggat |
2047 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0475 (Bit Score: 121; Significance: 4e-62; HSPs: 1)
Name: scaffold0475
Description:
Target: scaffold0475; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 33 - 213
Target Start/End: Original strand, 2176 - 2356
Alignment:
| Q |
33 |
gttagaccatctgggattgtttcgaagctaaaatcagtcaaaccatctaaggcatttggacctcttgatttgagcaagcgtttgtgattgtattcagtgt |
132 |
Q |
| |
|
|||| |||||| || || || ||||||| |||||||| |||||||| | ||||| |||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
2176 |
gttaaaccatcgggaatagtctcgaagcaaaaatcagcgaaaccatcaagagcattaggacctcttgatttgagcaagcgtttatgattgtattcagtgt |
2275 |
T |
|
| Q |
133 |
taacaaaggttatgtgaaagcctctaaggtgaagaagctttgctagtttgaacaatggattgatatggccttgaactggat |
213 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
2276 |
tgacaaaggttatgtgaaagcctctaaggtgaagaagctttgctagtttgaataatggattgatatggccttgaactggat |
2356 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 92; Significance: 7e-45; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 33 - 212
Target Start/End: Original strand, 24104447 - 24104626
Alignment:
| Q |
33 |
gttagaccatctgggattgtttcgaagctaaaatcagtcaaaccatctaaggcatttggacctcttgatttgagcaagcgtttgtgattgtattcagtgt |
132 |
Q |
| |
|
|||||||||||||| || || || ||| |||| ||| | |||||||| | | ||| ||| ||||||||| |||||||||||||||||||||||| |||| |
|
|
| T |
24104447 |
gttagaccatctggtatggtctcaaagttaaagtcattgaaaccatcaagagaattaggatctcttgattcgagcaagcgtttgtgattgtattcggtgt |
24104546 |
T |
|
| Q |
133 |
taacaaaggttatgtgaaagcctctaaggtgaagaagctttgctagtttgaacaatggattgatatggccttgaactgga |
212 |
Q |
| |
|
| || |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| ||||||| |||| |
|
|
| T |
24104547 |
tcacgaaggttatgtgaaagcctctaaggtgaagaagctttcctagtttgaacaatgcattgatatgaccttgaaatgga |
24104626 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 142
Target Start/End: Original strand, 26903639 - 26903670
Alignment:
| Q |
111 |
cgtttgtgattgtattcagtgttaacaaaggt |
142 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |
|
|
| T |
26903639 |
cgtttgtgattgtattcagtgttaacaaaggt |
26903670 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 3088065 - 3088277
Alignment:
| Q |
1 |
cttgactaacatcaccgtctccttctagtgttgttagaccatctgggattgtttcgaagctaaaatcagtcaaaccatctaaggcatttggacctcttga |
100 |
Q |
| |
|
|||||||||||||||| | ||||| | || |||||||||||| |||| || || ||| ||||||||| |||||||| | | ||| | ||||||||| |
|
|
| T |
3088065 |
cttgactaacatcaccattaccttccattggagttagaccatcttggatagtctcaaagacaaaatcagtgaaaccatcaagagaattagaacctcttga |
3088164 |
T |
|
| Q |
101 |
tttgagcaagcgtttgtgattgtattcagtgttaacaaaggttatgtgaaagcctctaaggtgaagaagctttgctagtttgaacaatggattgatatgg |
200 |
Q |
| |
|
||| ||||| || |||||||||||||| || || ||||||||||||||||||||| ||||||||||||| ||||||||||| ||||||||||| ||||| |
|
|
| T |
3088165 |
tttaagcaaacggttgtgattgtattcggtattgacaaaggttatgtgaaagcctttaaggtgaagaagttttgctagttttaacaatggatttatatga |
3088264 |
T |
|
| Q |
201 |
ccttgaactggat |
213 |
Q |
| |
|
||||||| ||||| |
|
|
| T |
3088265 |
ccttgaagtggat |
3088277 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 147
Target Start/End: Complemental strand, 1349641 - 1349579
Alignment:
| Q |
85 |
catttggacctcttgatttgagcaagcgtttgtgattgtattcagtgttaacaaaggttatgt |
147 |
Q |
| |
|
|||| |||||| | |||||||| ||||||||||| ||| |||||||||| ||||| ||||||| |
|
|
| T |
1349641 |
cattaggacctatggatttgagtaagcgtttgtggttgaattcagtgttgacaaatgttatgt |
1349579 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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