View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2070_low_5 (Length: 268)
Name: NF2070_low_5
Description: NF2070
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2070_low_5 |
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Alignment Details
Target: chr3 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 18 - 235
Target Start/End: Complemental strand, 53739804 - 53739587
Alignment:
| Q |
18 |
ttctgtaaatatcataactgcttgattatcagaccatgcatgtgtagcttatgaactccaggaaaagaaaacaaaatcaaaatggacatgatatcatgga |
117 |
Q |
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| T |
53739804 |
ttctgtaaatatcataacaacttgattatcagaccatgcatgtgtagcttatgaactccaggaaaagaaaacaaaatcaaaatgaacatgatatcatgga |
53739705 |
T |
|
| Q |
118 |
ccaatggtggtgattaacaatagtccaacaaagggatattaatcaaaggtccaacaaagggattgtctcacagatatttaagatgtgagatatgattttc |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
53739704 |
ccaatggtggtgattaacaatagtccaacaaagggatattaatcaaaggtccaacaaagggattgtctcacagatatttaagatgtgagatatgattttc |
53739605 |
T |
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| Q |
218 |
acttactggtatctacta |
235 |
Q |
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|||||||||||| ||||| |
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| T |
53739604 |
acttactggtatgtacta |
53739587 |
T |
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