View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20710_low_1 (Length: 1264)

Name: NF20710_low_1
Description: NF20710
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20710_low_1
NF20710_low_1
[»] chr4 (14 HSPs)
chr4 (20-642)||(11848518-11849140)
chr4 (831-1252)||(11847908-11848329)
chr4 (860-1249)||(8045703-8046083)
chr4 (991-1065)||(53483687-53483760)
chr4 (980-1047)||(15408139-15408206)
chr4 (992-1048)||(8834895-8834951)
chr4 (992-1048)||(13888641-13888697)
chr4 (986-1027)||(15747551-15747592)
chr4 (994-1046)||(14486661-14486713)
chr4 (992-1048)||(15245215-15245271)
chr4 (997-1048)||(22724691-22724742)
chr4 (992-1022)||(15069781-15069811)
chr4 (992-1022)||(15076381-15076411)
chr4 (82-155)||(8507784-8507857)
[»] chr6 (26 HSPs)
chr6 (831-1249)||(29613987-29614398)
chr6 (979-1231)||(23057760-23058006)
chr6 (854-1249)||(18800242-18800630)
chr6 (862-1132)||(929969-930229)
chr6 (992-1249)||(23839003-23839253)
chr6 (980-1249)||(10986169-10986431)
chr6 (992-1233)||(4477678-4477912)
chr6 (917-1207)||(19785794-19786076)
chr6 (917-1207)||(12168211-12168493)
chr6 (917-1207)||(19878304-19878586)
chr6 (917-1207)||(19287120-19287402)
chr6 (917-1207)||(19884080-19884362)
chr6 (1079-1249)||(21565294-21565462)
chr6 (991-1072)||(34639986-34640067)
chr6 (991-1052)||(34646660-34646721)
chr6 (943-1047)||(24512794-24512899)
chr6 (991-1037)||(25469704-25469750)
chr6 (992-1044)||(9187498-9187550)
chr6 (992-1048)||(25348486-25348542)
chr6 (854-925)||(21565072-21565140)
chr6 (994-1048)||(25598643-25598697)
chr6 (854-940)||(25598739-25598823)
chr6 (992-1048)||(25397172-25397228)
chr6 (992-1026)||(18659450-18659484)
chr6 (992-1026)||(24441673-24441707)
chr6 (854-919)||(4478004-4478067)
[»] scaffold0026 (2 HSPs)
scaffold0026 (831-1249)||(11689-12102)
scaffold0026 (991-1249)||(111491-111741)
[»] scaffold0006 (1 HSPs)
scaffold0006 (862-1249)||(49984-50360)
[»] scaffold1773 (1 HSPs)
scaffold1773 (862-1249)||(983-1359)
[»] scaffold0058 (1 HSPs)
scaffold0058 (831-1237)||(109-505)
[»] scaffold0924 (1 HSPs)
scaffold0924 (862-1249)||(624-1002)
[»] scaffold0029 (2 HSPs)
scaffold0029 (862-1208)||(111726-112064)
scaffold0029 (863-974)||(116858-116965)
[»] chr7 (28 HSPs)
chr7 (864-1249)||(13122792-13123166)
chr7 (979-1249)||(15167979-15168243)
chr7 (987-1249)||(18873164-18873420)
chr7 (864-1249)||(12709724-12710095)
chr7 (864-1237)||(13743526-13743886)
chr7 (996-1249)||(10895795-10896042)
chr7 (988-1249)||(14422789-14423043)
chr7 (992-1249)||(16009382-16009631)
chr7 (917-1207)||(12590568-12590851)
chr7 (917-1207)||(13007280-13007562)
chr7 (994-1194)||(16677152-16677348)
chr7 (994-1194)||(17651388-17651584)
chr7 (943-1047)||(21230910-21231015)
chr7 (854-1047)||(148619-148811)
chr7 (992-1047)||(11382871-11382926)
chr7 (992-1047)||(11389348-11389403)
chr7 (862-1006)||(1613588-1613731)
chr7 (980-1047)||(20311038-20311107)
chr7 (854-925)||(16677422-16677490)
chr7 (854-925)||(17651658-17651726)
chr7 (986-1027)||(831628-831669)
chr7 (986-1027)||(1196808-1196849)
chr7 (986-1027)||(34958578-34958619)
chr7 (992-1048)||(13679492-13679548)
chr7 (991-1046)||(2971254-2971309)
chr7 (991-1046)||(20906461-20906516)
chr7 (992-1022)||(11311083-11311113)
chr7 (860-934)||(14567330-14567402)
[»] chr8 (13 HSPs)
chr8 (864-1249)||(23866418-23866792)
chr8 (994-1249)||(8727735-8727984)
chr8 (991-1249)||(44477428-44477678)
chr8 (991-1249)||(44492586-44492836)
chr8 (854-1249)||(27940715-27941104)
chr8 (917-1207)||(17054439-17054720)
chr8 (979-1048)||(18614271-18614340)
chr8 (992-1048)||(23482053-23482109)
chr8 (980-1047)||(14056552-14056619)
chr8 (992-1048)||(39364919-39364975)
chr8 (980-1047)||(25111976-25112043)
chr8 (979-1046)||(29643373-29643440)
chr8 (991-1046)||(24320670-24320725)
[»] chr2 (20 HSPs)
chr2 (831-1249)||(26583632-26584042)
chr2 (979-1249)||(19661441-19661703)
chr2 (992-1249)||(6483523-6483772)
chr2 (992-1249)||(6486990-6487239)
chr2 (1079-1249)||(23089137-23089305)
chr2 (1079-1249)||(23101545-23101713)
chr2 (1078-1249)||(23878813-23878982)
chr2 (854-1006)||(6260035-6260186)
chr2 (854-999)||(19664937-19665081)
chr2 (991-1065)||(5706023-5706096)
chr2 (992-1048)||(21908358-21908414)
chr2 (992-1048)||(23265141-23265197)
chr2 (992-1048)||(23280209-23280265)
chr2 (854-925)||(23101323-23101391)
chr2 (992-1048)||(24661576-24661632)
chr2 (991-1046)||(10577-10632)
chr2 (991-1046)||(25180929-25180984)
chr2 (994-1052)||(23879002-23879060)
chr2 (992-1052)||(23101463-23101524)
chr2 (982-1063)||(26885166-26885246)
[»] chr5 (13 HSPs)
chr5 (987-1249)||(22750945-22751201)
chr5 (981-1249)||(38144526-38144786)
chr5 (992-1249)||(28370055-28370304)
chr5 (992-1249)||(19512191-19512441)
chr5 (920-1207)||(23528478-23528759)
chr5 (854-1047)||(42961566-42961759)
chr5 (980-1047)||(22438735-22438803)
chr5 (992-1048)||(18407944-18408000)
chr5 (992-1048)||(23111200-23111256)
chr5 (991-1046)||(19236900-19236955)
chr5 (991-1020)||(17021913-17021942)
chr5 (991-1044)||(22461158-22461211)
chr5 (991-1044)||(22467782-22467835)
[»] chr3 (22 HSPs)
chr3 (979-1249)||(14762745-14763009)
chr3 (994-1247)||(38310802-38311049)
chr3 (994-1230)||(20247791-20248021)
chr3 (992-1249)||(9534133-9534382)
chr3 (994-1237)||(24192771-24193009)
chr3 (991-1249)||(23370505-23370756)
chr3 (917-1072)||(41455022-41455177)
chr3 (1079-1249)||(55499185-55499353)
chr3 (862-966)||(16798569-16798673)
chr3 (991-1249)||(24933828-24934077)
chr3 (981-1051)||(16801457-16801526)
chr3 (992-1048)||(18929244-18929300)
chr3 (854-934)||(23370356-23370434)
chr3 (992-1048)||(17240513-17240569)
chr3 (991-1046)||(13302240-13302295)
chr3 (991-1046)||(13323787-13323842)
chr3 (854-925)||(55498962-55499030)
chr3 (991-1046)||(12033444-12033499)
chr3 (991-1046)||(13312896-13312951)
chr3 (991-1046)||(17131732-17131787)
chr3 (991-1026)||(23392819-23392854)
chr3 (991-1046)||(51301589-51301644)
[»] scaffold0117 (2 HSPs)
scaffold0117 (864-1249)||(1775-2148)
scaffold0117 (864-1249)||(8452-8825)
[»] scaffold0247 (1 HSPs)
scaffold0247 (887-1249)||(11146-11502)
[»] scaffold0090 (1 HSPs)
scaffold0090 (854-1249)||(17973-18361)
[»] scaffold0025 (1 HSPs)
scaffold0025 (994-1237)||(14398-14635)
[»] scaffold0154 (1 HSPs)
scaffold0154 (854-1066)||(30838-31050)
[»] chr1 (17 HSPs)
chr1 (992-1249)||(20437024-20437274)
chr1 (917-1072)||(41112010-41112165)
chr1 (20-305)||(12169375-12169662)
chr1 (979-1048)||(32651571-32651640)
chr1 (992-1048)||(18712798-18712854)
chr1 (992-1047)||(19663517-19663572)
chr1 (992-1048)||(20805320-20805376)
chr1 (992-1047)||(11158093-11158148)
chr1 (994-1048)||(10811785-10811839)
chr1 (991-1046)||(20851132-20851187)
chr1 (991-1046)||(20857759-20857814)
chr1 (991-1046)||(21706276-21706331)
chr1 (991-1046)||(21710818-21710873)
chr1 (992-1022)||(24476350-24476380)
chr1 (992-1022)||(25091418-25091448)
chr1 (993-1026)||(18271338-18271371)
chr1 (993-1026)||(18275992-18276025)
[»] scaffold0553 (2 HSPs)
scaffold0553 (991-1249)||(10195-10446)
scaffold0553 (854-934)||(10046-10124)
[»] scaffold0544 (2 HSPs)
scaffold0544 (991-1249)||(1525-1776)
scaffold0544 (854-934)||(1376-1454)
[»] scaffold0634 (1 HSPs)
scaffold0634 (1157-1249)||(3466-3558)
[»] scaffold0476 (2 HSPs)
scaffold0476 (1079-1249)||(3375-3544)
scaffold0476 (854-925)||(3153-3221)
[»] scaffold0077 (2 HSPs)
scaffold0077 (1079-1249)||(3704-3872)
scaffold0077 (854-925)||(3482-3550)
[»] scaffold2054 (1 HSPs)
scaffold2054 (862-1044)||(717-896)
[»] scaffold0796 (2 HSPs)
scaffold0796 (986-1188)||(1727-1920)
scaffold0796 (986-1188)||(5750-5943)
[»] scaffold0456 (4 HSPs)
scaffold0456 (1153-1237)||(806-889)
scaffold0456 (1153-1237)||(7951-8034)
scaffold0456 (987-1062)||(916-991)
scaffold0456 (987-1062)||(8061-8136)
[»] scaffold0129 (1 HSPs)
scaffold0129 (985-1065)||(45268-45347)
[»] scaffold0249 (1 HSPs)
scaffold0249 (854-999)||(2112-2256)
[»] scaffold0107 (1 HSPs)
scaffold0107 (943-1047)||(40482-40587)
[»] scaffold0019 (1 HSPs)
scaffold0019 (943-1047)||(135473-135578)
[»] scaffold0643 (1 HSPs)
scaffold0643 (854-951)||(8806-8901)
[»] scaffold0310 (1 HSPs)
scaffold0310 (980-1047)||(17643-17711)
[»] scaffold0235 (1 HSPs)
scaffold0235 (943-1045)||(22543-22646)
[»] scaffold0020 (1 HSPs)
scaffold0020 (992-1048)||(101928-101984)
[»] scaffold0004 (2 HSPs)
scaffold0004 (979-1048)||(116895-116964)
scaffold0004 (993-1026)||(60441-60474)
[»] scaffold0222 (1 HSPs)
scaffold0222 (992-1048)||(16819-16875)
[»] scaffold1913 (1 HSPs)
scaffold1913 (854-925)||(959-1028)
[»] scaffold0535 (1 HSPs)
scaffold0535 (854-925)||(5062-5131)
[»] scaffold0160 (1 HSPs)
scaffold0160 (854-925)||(15979-16048)
[»] scaffold0011 (1 HSPs)
scaffold0011 (887-1006)||(153322-153442)
[»] scaffold0461 (1 HSPs)
scaffold0461 (992-1048)||(8-64)
[»] scaffold0146 (1 HSPs)
scaffold0146 (992-1048)||(13631-13687)
[»] scaffold0815 (1 HSPs)
scaffold0815 (980-1043)||(1453-1516)
[»] scaffold0124 (1 HSPs)
scaffold0124 (992-1047)||(34276-34331)
[»] scaffold0138 (1 HSPs)
scaffold0138 (992-1048)||(12296-12352)
[»] scaffold0790 (1 HSPs)
scaffold0790 (981-1020)||(5480-5519)
[»] scaffold0139 (1 HSPs)
scaffold0139 (992-1047)||(14997-15052)
[»] scaffold0001 (1 HSPs)
scaffold0001 (982-1063)||(493019-493099)
[»] scaffold0317 (1 HSPs)
scaffold0317 (992-1048)||(1385-1441)
[»] scaffold0096 (1 HSPs)
scaffold0096 (988-1048)||(39503-39563)
[»] scaffold0039 (1 HSPs)
scaffold0039 (79-155)||(68792-68868)
[»] scaffold0348 (1 HSPs)
scaffold0348 (991-1046)||(9336-9391)
[»] scaffold0127 (1 HSPs)
scaffold0127 (991-1046)||(10239-10294)
[»] scaffold1318 (1 HSPs)
scaffold1318 (992-1046)||(1913-1967)
[»] scaffold0261 (1 HSPs)
scaffold0261 (980-1046)||(23558-23624)
[»] scaffold0091 (1 HSPs)
scaffold0091 (864-948)||(1644-1725)
[»] scaffold0067 (1 HSPs)
scaffold0067 (950-1006)||(46689-46746)


Alignment Details
Target: chr4 (Bit Score: 599; Significance: 0; HSPs: 14)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 599; E-Value: 0
Query Start/End: Original strand, 20 - 642
Target Start/End: Complemental strand, 11849140 - 11848518
Alignment:
Q  20 ccaagcacacccccacataaccctctccaacaaaagctcaattagttacattattaatattactccaaatagaaagaatacctccactattaccttcgga 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  11849140 ccaagcacacccccacataaccctctccaacaaaagctcaattagttacattattaatattactctaaatagaaagaatacctccactattaccttcgga 11849041  T
Q  120 aggaagaaacgtccaattacaatcctcccttccccataaattttgacaaaaagaagtcgaaatctcctccatcttcgtctcttgaatagccaaaaaatca 219  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11849040 aggaagaaacgcccaattacaatcctcccttccccataaattttgacaaaaagaagtcgaaatctcctccatcttcgtctcttgaatagccaaaaaatca 11848941  T
Q  220 accttattacttcgcactaaatctttaatgttattttctttgaaacacccccaagcctttaatattaaaggttgtaattatcattggataccccatcttc 319  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  11848940 accttattacttcgcactaaatctttaatgttattttctttgaaacacccccaagcctttaatattaaaggttgtaattatcattggatacccgatcttc 11848841  T
Q  320 tctcccttatgaccttcttatccacatctgcaacctccatattttccaacctatccttattttccttccccggtgtagtgaacgaaaatcccatcacatt 419  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11848840 tctcccttatgaccttcttatccacatctgcaacctgcatattttccaccctatccttattttccttccccggtgtagtgaacgaaaatcccatcacatt 11848741  T
Q  420 ttgcctctcaaacaatgatgaagcctccaacttcttcaaaggatctatttccccattcatcaaagatgattccggtacttgggtgacttcttcatcaaga 519  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11848740 ttgcctctcaaacaatgatgaagcctccaacttcttcaaaggatctatttccccattcatcaaagatgattccggtacttgggtgacttcttcatcaaga 11848641  T
Q  520 ataagtctaaaccccgatgatggagaaaccgccatcccggacccgttgccactatcatctttcttcctcccactctgtctcgctactgctctttcagggg 619  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  11848640 ataagtctaaaccccgatgatggagaaaccgccatcccggacccgttgccactatcatctttcttcctcccactatgtctcgctactgctctttcagggg 11848541  T
Q  620 aagttgtcgatgtaacgccctag 642  Q
    |||||||||||||||||||||||    
T  11848540 aagttgtcgatgtaacgccctag 11848518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 410; E-Value: 0
Query Start/End: Original strand, 831 - 1252
Target Start/End: Complemental strand, 11848329 - 11847908
Alignment:
Q  831 gaaataagggaagttatggtggaagttagaaaaagaaagaaaaacagtcaaaacgttttttacgtaagaacattaagcttttgggagaaaagggaaaaga 930  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  11848329 gaaataagggaagttatggtggaagttagaaaaagaaagaaaaacagtcaaaacgttttttacgtaagaacattaagcttttgggagaaaagggagaaga 11848230  T
Q  931 agagccagagctagagaggagagcctagaaccgattcttgctgtctaattttctgcaaaactaaggtaagggtgagactatctctcaataatcataatct 1030  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11848229 agagccagagctagagaggagagcctagaaccgattcttgctgtctaattttctgcaaaactaaggtaagggtgagactatctctcaataatcataatct 11848130  T
Q  1031 ataattcctgaaaattgacctagtggcatagttttgaaaaattaaaataaattgagggttagggtttgatgacgattctgaagaggaatgggtaatgatc 1130  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11848129 ataattcctgaaaattgacctagtggcatagttttgaaaaattaaaatcaattgagggttagggtttgatgacgattctgaagaggaatgggtaatgatc 11848030  T
Q  1131 atgttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaatt 1230  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11848029 atgttaatccttttataatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaatt 11847930  T
Q  1231 gatgaatttgtgtatgatgatg 1252  Q
    ||||||||||||||||||||||    
T  11847929 gatgaatttgtgtatgatgatg 11847908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 860 - 1249
Target Start/End: Original strand, 8045703 - 8046083
Alignment:
Q  860 aaaaagaaagaaaaacagtcaaaacgttttttacgtaagaacattaagcttttgggagaaaagggaaaagaagagccagagctagagaggagagcctaga 959  Q
    ||||||||||||||||||||| |||||||   ||||||||| | || ||||||||||||||||||| ||||||||| ||| | ||||| |||||||||||    
T  8045703 aaaaagaaagaaaaacagtcagaacgtttga-acgtaagaaaacta-gcttttgggagaaaagggagaagaagagcaagaacaagagatgagagcctaga 8045800  T
Q  960 accgattcttgctgtctaattttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcat 1059  Q
    |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||||| | ||||    
T  8045801 accgatccttgctgtcttattttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaa-ttgacctaattgcat 8045899  T
Q  1060 agttttgaaaaattaaaataaattgagggttagggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcctcttataatataatgttca 1159  Q
    ||||||| ||||      |||||||||||||||||||||| ||  ||||||||| | ||||||||| ||| |||||||| ||||| ||||||||||||||    
T  8045900 agttttggaaaa------taaattgagggttagggtttgacgagaattctgaagggaaatgggtaaagataatgttaattctcttgtaatataatgttca 8045993  T
Q  1160 gaatgaaaacttaatctttgttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatg 1249  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  8045994 gaatgaaaacttaatccttgttgttgctgtgatcataaattgattgaaatttatgagtgattggatgaattgatgaatttgtgtatgatg 8046083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 991 - 1065
Target Start/End: Complemental strand, 53483760 - 53483687
Alignment:
Q  991 ctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagtttt 1065  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | | ||||||||    
T  53483760 ctaaggtaagggtgagactatctctcaataatcataatctataattcctg-aaattgacctaattgaatagtttt 53483687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 980 - 1047
Target Start/End: Complemental strand, 15408206 - 15408139
Alignment:
Q  980 tttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattg 1047  Q
    |||||||| | |||||||||||||||||||||||||||||||||||| | ||||||| ||||||||||    
T  15408206 tttctgcagatctaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattg 15408139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 992 - 1048
Target Start/End: Complemental strand, 8834951 - 8834895
Alignment:
Q  992 taaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattga 1048  Q
    ||||||||||||||| ||| |||||||| |||||||| ||||||| |||||||||||    
T  8834951 taaggtaagggtgaggctaactctcaatgatcataatatataatttctgaaaattga 8834895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 992 - 1048
Target Start/End: Complemental strand, 13888697 - 13888641
Alignment:
Q  992 taaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattga 1048  Q
    ||||||||||||||| ||| |||||||| |||||||| ||||||| |||||||||||    
T  13888697 taaggtaagggtgaggctaactctcaatgatcataatgtataatttctgaaaattga 13888641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 986 - 1027
Target Start/End: Original strand, 15747551 - 15747592
Alignment:
Q  986 caaaactaaggtaagggtgagactatctctcaataatcataa 1027  Q
    ||||||||||||||||||||||||| ||||||||||| ||||    
T  15747551 caaaactaaggtaagggtgagactaactctcaataattataa 15747592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 994 - 1046
Target Start/End: Complemental strand, 14486713 - 14486661
Alignment:
Q  994 aggtaagggtgagactatctctcaataatcataatctataattcctgaaaatt 1046  Q
    |||||||||||||||||||  ||||| |||||||| ||||||| |||||||||    
T  14486713 aggtaagggtgagactatccttcaatgatcataatatataatttctgaaaatt 14486661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 992 - 1048
Target Start/End: Complemental strand, 15245271 - 15245215
Alignment:
Q  992 taaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattga 1048  Q
    ||||||||||||||| ||| |||||||| ||| |||| ||||||| |||||||||||    
T  15245271 taaggtaagggtgaggctaactctcaatgatcgtaatatataatttctgaaaattga 15245215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 997 - 1048
Target Start/End: Original strand, 22724691 - 22724742
Alignment:
Q  997 taagggtgagactatctctcaataatcataatctataattcctgaaaattga 1048  Q
    |||||||||||||||||||||||||| ||| | || |||| |||||||||||    
T  22724691 taagggtgagactatctctcaataataatagtatagaatttctgaaaattga 22724742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 992 - 1022
Target Start/End: Complemental strand, 15069811 - 15069781
Alignment:
Q  992 taaggtaagggtgagactatctctcaataat 1022  Q
    |||||||||||||||||||||||||||||||    
T  15069811 taaggtaagggtgagactatctctcaataat 15069781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 992 - 1022
Target Start/End: Complemental strand, 15076411 - 15076381
Alignment:
Q  992 taaggtaagggtgagactatctctcaataat 1022  Q
    |||||||||||||||||||||||||||||||    
T  15076411 taaggtaagggtgagactatctctcaataat 15076381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 82 - 155
Target Start/End: Original strand, 8507784 - 8507857
Alignment:
Q  82 ctccaaatagaaagaatacctccactattaccttcggaaggaagaaacgtccaattacaatcctcccttcccca 155  Q
    ||||||||||| ||||| || ||||||||||||||||||||   ||||  ||||| |||||| || ||||||||    
T  8507784 ctccaaatagatagaattccaccactattaccttcggaaggtctaaactcccaatcacaatcatcacttcccca 8507857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 283; Significance: 1e-158; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 831 - 1249
Target Start/End: Original strand, 29613987 - 29614398
Alignment:
Q  831 gaaataagggaagttatggtggaagttagaaaaagaaagaaaaacagtcaaaacgttttttacgtaagaacattaagcttttgggagaaaagggaaaaga 930  Q
    |||||||||||||||||||| | |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  29613987 gaaataagggaagttatggtaggagttagaaaaagaaagaataacagtcaaaacgtttt-tacgtaagaacattaagcttttgggagaaaagggagaaga 29614085  T
Q  931 agagccagagctagagaggagagcctagaaccgattcttgctgtctaattttctgcaaaactaaggtaagggtgagactatctctcaataatcataatct 1030  Q
    ||||  |||||||||||| ||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29614086 agagttagagctagagagtagaaccttgaaccgattcttgctgtctaattttctgcaaaactaaggtaagggtgagactatctctcaataatcataatct 29614185  T
Q  1031 ataattcctgaaaattgacctagtggcatagttttgaaaaattaaaataaattgagggttagggtttgatgacgattctgaagaggaatgggtaatgatc 1130  Q
    |||||| ||||||||||||||||| ||||| ||||| |     ||||||||||||||||||||||||||||| |||| ||||| | ||||||||||||||    
T  29614186 ataatttctgaaaattgacctagttgcataattttgga-----aaaataaattgagggttagggtttgatgatgattatgaagggaaatgggtaatgatc 29614280  T
Q  1131 atgttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaatt 1230  Q
    |||||||| ||||| | ||  |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| ||||||||||||||    
T  29614281 atgttaattctcttgt-attgaatgtttagaatgaaaacttaatctttgttgttgctgtgatcataacttgattgaaatttatgaatgattggatgaatt 29614379  T
Q  1231 gatgaatttgtgtatgatg 1249  Q
    |||||||||||||||||||    
T  29614380 gatgaatttgtgtatgatg 29614398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 174; E-Value: 5e-93
Query Start/End: Original strand, 979 - 1231
Target Start/End: Complemental strand, 23058006 - 23057760
Alignment:
Q  979 ttttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagttttgaaaaattaaaat 1078  Q
    |||||| | ||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||| || ||          
T  23058006 ttttcttctaaattaaggtaagggtgagactatctctcgataatcataatctataattcctgaaaattgacctaattgcatagttttggaagat------ 23057913  T
Q  1079 aaattgagggttagggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcctcttataatataatgttcagaatgaaaacttaatcttt 1178  Q
    |||||||||||||||||||||||| |||||||||| | |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  23057912 aaattgagggttagggtttgatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatcttt 23057813  T
Q  1179 gttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattg 1231  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  23057812 gttgctgctgtgatcataaattgattgaaaattatgagtgattggatgaattg 23057760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 166; E-Value: 3e-88
Query Start/End: Original strand, 854 - 1249
Target Start/End: Complemental strand, 18800630 - 18800242
Alignment:
Q  854 agttagaaaaagaaagaaaaacagtcaaaacgttttttacgtaagaacattaagcttttgggagaaaagggaaaagaagagccagagctagagaggagag 953  Q
    ||||||||||||||| | |||||||||  |||||||| ||||||||| | |||| ||||||||||||||||| ||||||||| ||| | ||| |||||||    
T  18800630 agttagaaaaagaaaaagaaacagtcagtacgttttt-acgtaagaaaactaagtttttgggagaaaagggagaagaagagcaagaacaagataggagag 18800532  T
Q  954 cctag-aaccgattcttgctgtctaatt-ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacct 1051  Q
    ||||| |||||||| ||||||| ||||  |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  18800531 cctaggaaccgatt-ttgctgtgtaatccttctgcaaaactaatgtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacct 18800433  T
Q  1052 agtggcatagttttgaaaaattaaaataaattgagggttagggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcctcttataatat 1151  Q
    | | || |||||||| |||||       ||||||||||||||||||||||| ||||||| || |||||| ||||||||||||||||| || || |||| |    
T  18800432 aattgcttagttttggaaaat-----agaattgagggttagggtttgatgatgattctggag-ggaatgagtaatgatcatgttaattctgttgtaatgt 18800339  T
Q  1152 aatgttcagaatgaaaacttaatctttgttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatg 1249  Q
     ||||||| ||||||| |||||||| | |||||| |||||||| |||||||||||||| ||| | |||||||||||||||||||| ||  ||||||||    
T  18800338 gatgttcaaaatgaaatcttaatctatattgttgttgtgatcacaaattgattgaaaa-tataattgattggatgaattgatgaagtttggtatgatg 18800242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 152; E-Value: 7e-80
Query Start/End: Original strand, 862 - 1132
Target Start/End: Original strand, 929969 - 930229
Alignment:
Q  862 aaagaaagaaaaacagtcaaaacgttttttacgtaagaacattaagcttttgggagaaaagggaaaagaagagccagagctagagaggagagcctagaac 961  Q
    ||||||||||||||||||||||||||||| ||||||||| | || ||||| ||||||||||||  ||||||||| ||| | |||||||||||||||||||    
T  929969 aaagaaagaaaaacagtcaaaacgttttt-acgtaagaaaacta-gcttt-gggagaaaagggggaagaagagcaagatcaagagaggagagcctagaac 930065  T
Q  962 cgattcttgctgtctaattttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatag 1061  Q
    |||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||| | | ||||    
T  930066 cgatccttgctgtcttattttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctatagtttctgaaaattgacctaattgtatag 930165  T
Q  1062 ttttgaaaaattaaaataaattgagggttagggtttgatgacgattctgaagaggaatgggtaatgatcat 1132  Q
    ||||||      ||||||||||||||||||||||||||||| | |||||||| ||||||||||||||||||    
T  930166 ttttga------aaaataaattgagggttagggtttgatgatgtttctgaag-ggaatgggtaatgatcat 930229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 132; E-Value: 6e-68
Query Start/End: Original strand, 992 - 1249
Target Start/End: Complemental strand, 23839253 - 23839003
Alignment:
Q  992 taaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagt-tttgaaaaattaaaataaattgagggtt 1090  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | ||||||| |||| || ||      ||||||||||||    
T  23839253 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtgtttggaagat------aaattgagggtt 23839160  T
Q  1091 agggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtg 1190  Q
    |||||||||||| |||||| ||| |||||||||| ||||||||||||| || || |||| |||||||||||||||||||||||||| |  ||||| ||||    
T  23839159 agggtttgatgatgattct-aaggggaatgggtattgatcatgttaattctgttgtaatgtaatgttcagaatgaaaacttaatctatactgttgttgtg 23839061  T
Q  1191 atcataaattgattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatg 1249  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||||  | |||||||||    
T  23839060 atcataaattgattg-aaattatgattgattggatgaattgatgaagatttgtatgatg 23839003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 126; E-Value: 2e-64
Query Start/End: Original strand, 980 - 1249
Target Start/End: Original strand, 10986169 - 10986431
Alignment:
Q  980 tttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagttttgaaaaattaaaata 1079  Q
    |||||||||  ||||||||||||||||||||||| |||||||||||||||||||||| || |||||||||||| | ||||||||||   ||      |||    
T  10986169 tttctgcaattctaaggtaagggtgagactatctttcaataatcataatctataatttctaaaaattgacctaattgcatagtttttggaag-----ata 10986263  T
Q  1080 aattgagggttagggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcctcttataatataatgttcagaatgaaaacttaatctttg 1179  Q
    ||||||||||||||||||||||| |||||||| | |||||||||| ||||||||||||| || || |||| |||||||||||||||||||||||||| |     
T  10986264 aattgagggttagggtttgatgatgattctgagg-ggaatgggtattgatcatgttaattctgttgtaatgtaatgttcagaatgaaaacttaatctata 10986362  T
Q  1180 ttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatg 1249  Q
     ||||| ||||||||||||||||||| |||||| || ||||||||||||||||||||  | |||||||||    
T  10986363 ctgttgttgtgatcataaattgattg-aaattacgattgattggatgaattgatgaagatttgtatgatg 10986431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 118; E-Value: 1e-59
Query Start/End: Original strand, 992 - 1233
Target Start/End: Complemental strand, 4477912 - 4477678
Alignment:
Q  992 taaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagttttgaaaaattaaaataaattgagggtta 1091  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||   ||      |||||||| ||||||    
T  4477912 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaag-----ataaattgtgggtta 4477818  T
Q  1092 gggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtga 1191  Q
    ||||||||||| |||||||| | |||||||||| |||||||| |||| || || |||| ||||||| |||||||||||||||||| | |||||| |||||    
T  4477817 gggtttgatgatgattctgagg-ggaatgggtattgatcatgctaattctgttgtaatgtaatgtttagaatgaaaacttaatctatattgttgttgtga 4477719  T
Q  1192 tcataaattgattgaaaattatgagtgattggatgaattgat 1233  Q
    |||||||||||||| ||||||||| ||||||||||| |||||    
T  4477718 tcataaattgattg-aaattatgattgattggatgatttgat 4477678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 115; E-Value: 9e-58
Query Start/End: Original strand, 917 - 1207
Target Start/End: Original strand, 19785794 - 19786076
Alignment:
Q  917 gaaaagggaaaagaagagccagagctagagaggagagcctagaac-cgattcttgctgtctaattttctgcaaaactaaggtaagggtgagactatctct 1015  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||  |||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  19785794 gaaaagggagaagaagagcaagagctagagaggagagcctagaaatcgatccttgctgtctaattttctgcaaaactaaggtaagggtgagactatctct 19785893  T
Q  1016 caataatcataatctataattcctgaaaattgacctagtggcatagttttgaaaaattaaaataaattgagggttagggtttgatgacgattctgaagag 1115  Q
    ||||||||||||||||||||| ||| ||||||||||||| | |||||||||       |||||||| |||  ||||||||||||||| ||||||||   |    
T  19785894 caataatcataatctataatttctg-aaattgacctagttgaatagttttg------gaaaataaaatgaaagttagggtttgatgatgattctga--tg 19785984  T
Q  1116 gaatgggtaatgatcatgttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtgat-cataaattgattgaa 1207  Q
    ||||| |||| ||| |||||| |  ||||  ||| ||||||| |||| |||| |||||||  |||||||||||| || ||| |||||||||||    
T  19785985 gaatgagtaaagatgatgttagt-ttcttggaatttaatgttaagaacgaaatcttaatccatgttgttgctgtaatccatgaattgattgaa 19786076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 107; E-Value: 5e-53
Query Start/End: Original strand, 917 - 1207
Target Start/End: Complemental strand, 12168493 - 12168211
Alignment:
Q  917 gaaaagggaaaagaagagccagagctagagaggagagcctagaac-cgattcttgctgtctaattttctgcaaaactaaggtaagggtgagactatctct 1015  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||  |||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  12168493 gaaaagggagaagaagagcaagagctagagaggagagcctagaaatcgatccttgctgtctaattttctgcaaaactaaggtaagggtgagactatctct 12168394  T
Q  1016 caataatcataatctataattcctgaaaattgacctagtggcatagttttgaaaaattaaaataaattgagggttagggtttgatgacgattctgaagag 1115  Q
    ||||||||||||||||||||| ||| ||||||||||| | | |||||||||       |||||||  |||  ||||||||||||||| ||||||||   |    
T  12168393 caataatcataatctataatttctg-aaattgacctaattgaatagttttg------gaaaataagatgaaagttagggtttgatgatgattctga--tg 12168303  T
Q  1116 gaatgggtaatgatcatgttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtgat-cataaattgattgaa 1207  Q
    ||||| |||| ||| |||||| |  ||||  ||| ||||||| |||| |||| |||||||  |||||||||||| || ||| |||||||||||    
T  12168302 gaatgagtaaagatgatgttagt-ttcttggaatttaatgttaagaacgaaatcttaatccatgttgttgctgtaatccatgaattgattgaa 12168211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 107; E-Value: 5e-53
Query Start/End: Original strand, 917 - 1207
Target Start/End: Complemental strand, 19878586 - 19878304
Alignment:
Q  917 gaaaagggaaaagaagagccagagctagagaggagagcctagaac-cgattcttgctgtctaattttctgcaaaactaaggtaagggtgagactatctct 1015  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||  |||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  19878586 gaaaagggagaagaagagcaagagctagagaggagagcctagaaatcgatccttgctgtctaattttctgcaaaactaaggtaagggtgagactatctct 19878487  T
Q  1016 caataatcataatctataattcctgaaaattgacctagtggcatagttttgaaaaattaaaataaattgagggttagggtttgatgacgattctgaagag 1115  Q
    ||||||||||||||||||||| ||| ||||||||||| | | |||||||||       |||||||  |||  ||||||||||||||| ||||||||   |    
T  19878486 caataatcataatctataatttctg-aaattgacctaattgaatagttttg------gaaaataagatgaaagttagggtttgatgatgattctga--tg 19878396  T
Q  1116 gaatgggtaatgatcatgttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtgat-cataaattgattgaa 1207  Q
    ||||| |||| ||| |||||| |  ||||  ||| ||||||| |||| |||| |||||||  |||||||||||| || ||| |||||||||||    
T  19878395 gaatgagtaaagatgatgttagt-ttcttggaatttaatgttaagaacgaaatcttaatccatgttgttgctgtaatccatgaattgattgaa 19878304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 99; E-Value: 3e-48
Query Start/End: Original strand, 917 - 1207
Target Start/End: Complemental strand, 19287402 - 19287120
Alignment:
Q  917 gaaaagggaaaagaagagccagagctagagaggagagcctagaac-cgattcttgctgtctaattttctgcaaaactaaggtaagggtgagactatctct 1015  Q
    |||||||||  |||||||| ||||||||||||||||||||||||  |||| |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  19287402 gaaaagggagtagaagagcaagagctagagaggagagcctagaaatcgatccttgttgtctaattttctgcaaaactaaggtaagggtgagactatctct 19287303  T
Q  1016 caataatcataatctataattcctgaaaattgacctagtggcatagttttgaaaaattaaaataaattgagggttagggtttgatgacgattctgaagag 1115  Q
    ||||||||||||||||||||| ||| ||||||||||| | | |||||||||       |||||||  |||  ||||||||||||||| ||||||||   |    
T  19287302 caataatcataatctataatttctg-aaattgacctaattgaatagttttg------gaaaataagatgaaagttagggtttgatgatgattctga--tg 19287212  T
Q  1116 gaatgggtaatgatcatgttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtgat-cataaattgattgaa 1207  Q
    ||||| |||| ||| |||||| |  ||||  ||| ||||||| |||| |||| |||||||  |||||||||||| || ||| |||||||||||    
T  19287211 gaatgagtaaagatgatgttagt-ttcttggaatttaatgttaagaacgaaatcttaatccatgttgttgctgtaatccatgaattgattgaa 19287120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 99; E-Value: 3e-48
Query Start/End: Original strand, 917 - 1207
Target Start/End: Complemental strand, 19884362 - 19884080
Alignment:
Q  917 gaaaagggaaaagaagagccagagctagagaggagagcctagaac-cgattcttgctgtctaattttctgcaaaactaaggtaagggtgagactatctct 1015  Q
    ||||||||| | ||||||| ||||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  19884362 gaaaagggagaggaagagcaagagctagagaggagagcctagaaatcgatccttgctgtctaattttctgcaaaactaaggttagggtgagactatctct 19884263  T
Q  1016 caataatcataatctataattcctgaaaattgacctagtggcatagttttgaaaaattaaaataaattgagggttagggtttgatgacgattctgaagag 1115  Q
    ||||||||||||||||||||| ||| ||||||||||| | | |||||||||       |||||||  |||  ||||||||||||||| ||||||||   |    
T  19884262 caataatcataatctataatttctg-aaattgacctaattgaatagttttg------gaaaataagatgaaagttagggtttgatgatgattctga--tg 19884172  T
Q  1116 gaatgggtaatgatcatgttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtgat-cataaattgattgaa 1207  Q
    ||||| |||| ||| |||||| |  ||||  ||| ||||||| |||| |||| |||||||  |||||||||||| || ||| |||||||||||    
T  19884171 gaatgagtaaagatgatgttagt-ttcttggaatttaatgttaagaacgaaatcttaatccatgttgttgctgtaatccatgaattgattgaa 19884080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 83; E-Value: 1e-38
Query Start/End: Original strand, 1079 - 1249
Target Start/End: Original strand, 21565294 - 21565462
Alignment:
Q  1079 aaattgagggttagggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcctcttataatataatgttcagaatgaaaacttaatcttt 1178  Q
    |||||||||||||||||||||||| |||||| ||| ||||||||||||||||||||||||  | || |||| | | |||| |||||||| |||||||| |    
T  21565294 aaattgagggttagggtttgatgatgattct-aaggggaatgggtaatgatcatgttaattatgttgtaatgtgacgttcggaatgaaatcttaatctat 21565392  T
Q  1179 gttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatg 1249  Q
      ||||||||||||||||||||||||||||| ||| | |||||||||||||||||||| || |||||||||    
T  21565393 actgttgctgtgatcataaattgattgaaaa-tataattgattggatgaattgatgaagttctgtatgatg 21565462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 58; E-Value: 9e-24
Query Start/End: Original strand, 991 - 1072
Target Start/End: Original strand, 34639986 - 34640067
Alignment:
Q  991 ctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagttttgaaaaat 1072  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| | | ||||||||| |||||    
T  34639986 ctaaggtaagggtgagactatctctcaataatcttaatctataatttctgaaaattgacctaattgaatagttttggaaaat 34640067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 991 - 1052
Target Start/End: Original strand, 34646660 - 34646721
Alignment:
Q  991 ctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgaccta 1052  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||    
T  34646660 ctaaggtaagggtgagactatctctcaataatcttaatctataatttctgaaaattgaccta 34646721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 943 - 1047
Target Start/End: Original strand, 24512794 - 24512899
Alignment:
Q  943 agagaggagagcctag-aaccgattcttgctgtctaat-tttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctg 1040  Q
    |||||| ||||||||| |||||||| |||||||  ||| |||||||||| ||||||| |||||||||||||||||||||||||||| | ||||||| |||    
T  24512794 agagagaagagcctaggaaccgatt-ttgctgtgcaatctttctgcaaatctaaggtgagggtgagactatctctcaataatcatagtatataatttctg 24512892  T
Q  1041 aaaattg 1047  Q
    |||||||    
T  24512893 aaaattg 24512899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 991 - 1037
Target Start/End: Original strand, 25469704 - 25469750
Alignment:
Q  991 ctaaggtaagggtgagactatctctcaataatcataatctataattc 1037  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  25469704 ctaaggtaagggtgagactatctctcaataatcataatctataattc 25469750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 992 - 1044
Target Start/End: Complemental strand, 9187550 - 9187498
Alignment:
Q  992 taaggtaagggtgagactatctctcaataatcataatctataattcctgaaaa 1044  Q
    |||||||||||||||||||||||||||||||| ||||  |||||| |||||||    
T  9187550 taaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaa 9187498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 992 - 1048
Target Start/End: Complemental strand, 25348542 - 25348486
Alignment:
Q  992 taaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattga 1048  Q
    ||||||||||||||||||||||||||||||| ||| | || |||| |||||||||||    
T  25348542 taaggtaagggtgagactatctctcaataataatagtatagaatttctgaaaattga 25348486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 854 - 925
Target Start/End: Original strand, 21565072 - 21565140
Alignment:
Q  854 agttagaaaaagaaagaaaaacagtcaaaacgttttttacgtaagaacattaagcttttgggagaaaaggga 925  Q
    |||||||||||||||| |||||||||| |||| |||||||||||||| | | ||||||||||||||||||||    
T  21565072 agttagaaaaagaaag-aaaacagtcagaacg-tttttacgtaagaaaact-agcttttgggagaaaaggga 21565140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 994 - 1048
Target Start/End: Complemental strand, 25598697 - 25598643
Alignment:
Q  994 aggtaagggtgagactatctctcaataatcataatctataattcctgaaaattga 1048  Q
    ||||||||||||||||| |||||||| |||||||| |||| || |||||||||||    
T  25598697 aggtaagggtgagactaactctcaatgatcataatatatattttctgaaaattga 25598643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 854 - 940
Target Start/End: Complemental strand, 25598823 - 25598739
Alignment:
Q  854 agttagaaaaagaaagaaaaacagtcaaaacgttttttacgtaagaacattaagcttttgggagaaaagggaaaagaagagccagag 940  Q
    ||||||||||||||||||||||||| | || | |||| ||||||||| | | |||||||||||||||||||| |||| |||| ||||    
T  25598823 agttagaaaaagaaagaaaaacagttagaatg-ttttaacgtaagaaaact-agcttttgggagaaaagggagaagaggagcaagag 25598739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 992 - 1048
Target Start/End: Complemental strand, 25397228 - 25397172
Alignment:
Q  992 taaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattga 1048  Q
    ||||||||||||||| ||| ||||| || |||||||| ||||||| |||||||||||    
T  25397228 taaggtaagggtgaggctaactctcgatgatcataatatataatttctgaaaattga 25397172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 992 - 1026
Target Start/End: Complemental strand, 18659484 - 18659450
Alignment:
Q  992 taaggtaagggtgagactatctctcaataatcata 1026  Q
    ||||||||||||||||||| |||||||||||||||    
T  18659484 taaggtaagggtgagactaactctcaataatcata 18659450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 992 - 1026
Target Start/End: Complemental strand, 24441707 - 24441673
Alignment:
Q  992 taaggtaagggtgagactatctctcaataatcata 1026  Q
    ||||||||||||||||||| |||||||||||||||    
T  24441707 taaggtaagggtgagactaactctcaataatcata 24441673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 854 - 919
Target Start/End: Complemental strand, 4478067 - 4478004
Alignment:
Q  854 agttagaaaaagaaagaaaaacagtcaaaacgttttttacgtaagaacattaagcttttgggagaa 919  Q
    ||||||||||||||||||||||||||| || | |||| ||||||||| | | ||||||||||||||    
T  4478067 agttagaaaaagaaagaaaaacagtcagaatg-ttttaacgtaagaaaact-agcttttgggagaa 4478004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 270; Significance: 1e-150; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 270; E-Value: 1e-150
Query Start/End: Original strand, 831 - 1249
Target Start/End: Original strand, 11689 - 12102
Alignment:
Q  831 gaaataagggaagttatggtggaagttagaaaaagaaagaaaaacagtcaaaacgttttttacgtaagaacattaagcttttgggagaaaagggaaaaga 930  Q
    |||||| |||||||||| || | ||||||||||||||||||||||||||| ||||||||| | ||||||| | |||||||||||||||||||||| ||||    
T  11689 gaaataggggaagttatagtaggagttagaaaaagaaagaaaaacagtcagaacgttttt-atgtaagaaaactaagcttttgggagaaaagggagaaga 11787  T
Q  931 agagccagagctagagaggagagcctagaa-ccgattcttgctgtctaat-tttctgcaaaactaaggtaagggtgagactatctctcaataatcataat 1028  Q
    ||||||||||| |||||||||||||||||| ||||||| ||| || |||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  11788 agagccagagcaagagaggagagcctagaaaccgattcatgcagtataatctttctgcaaaactaaggtaagggtgagactatctctcaataatcataat 11887  T
Q  1029 ctataattcctgaaaattgacctagtggcatagttttgaaaaattaaaataaattgagggttagggtttgatgacgattctgaagaggaatgggtaatga 1128  Q
    |||||||| ||||||||||||||| | |||||||||||       ||||||||||||| ||||||||||||||| |||||||||| | ||||||||||||    
T  11888 ctataatttctgaaaattgacctaattgcatagttttg------gaaaataaattgagagttagggtttgatgatgattctgaagggaaatgggtaatga 11981  T
Q  1129 tcatgttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaa 1228  Q
    |||||||||| ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  11982 tcatgttaattctcttgtaatataatcttcagaatgaaaacttaatctttgttgttgctgtgatcataagttgattgaaatttatgagtgattggatgaa 12081  T
Q  1229 ttgatgaatttgtgtatgatg 1249  Q
    |||||||||||||||||||||    
T  12082 ttgatgaatttgtgtatgatg 12102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 140; E-Value: 1e-72
Query Start/End: Original strand, 991 - 1249
Target Start/End: Complemental strand, 111741 - 111491
Alignment:
Q  991 ctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagttttgaaaaattaaaataaattgagggtt 1090  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||| |||||      ||||||||||||    
T  111741 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaat------aaattgagggtt 111648  T
Q  1091 agggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtg 1190  Q
    |||||||||||| |||||||| | |||||||||| ||||||||||||| || || |||| ||||||| |||||||||||||||||| |  ||||| ||||    
T  111647 agggtttgatgatgattctgagg-ggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactgttgttgtg 111549  T
Q  1191 atcataaattgattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatg 1249  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||||  | |||||||||    
T  111548 atcataaattgattg-aaattatgattgattggatgaattgatgaagatttgtatgatg 111491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 249; Significance: 1e-138; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 862 - 1249
Target Start/End: Complemental strand, 50360 - 49984
Alignment:
Q  862 aaagaaagaaaaacagtcaaaacgttttttacgtaagaacattaagcttttgggagaaaagggaaaagaagagccagagctagagaggagagcctagaac 961  Q
    |||||| |||||||||||||||||||||| ||||||||| | || ||||| ||||||||||||| ||||||||| ||| | |||||||||||||||||||    
T  50360 aaagaaggaaaaacagtcaaaacgttttt-acgtaagaaaacta-gcttt-gggagaaaagggagaagaagagcaagaacaagagaggagagcctagaac 50264  T
Q  962 cgattcttgctgtctaattttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatag 1061  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | ||||||    
T  50263 cgatccttgctgtctaattttatgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaa-ttgacctaattgcatag 50165  T
Q  1062 ttttgaaaaattaaaataaattgagggttagggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcctcttataatataatgttcaga 1161  Q
    ||||| |||||      |||||||||||||||||||||||| |||| ||||| | |||||||||||||||||||||| ||||| ||||||||||||||||    
T  50164 ttttggaaaat------aaattgagggttagggtttgatgaggattatgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcaga 50071  T
Q  1162 atgaaaacttaatctttgttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatg 1249  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  50070 atgaaaacttaatc-ttgttgttgctgtgatcataaattgattgaaatttatgagtgattggatgaattgatgaatttgtgtatgatg 49984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1773 (Bit Score: 245; Significance: 1e-135; HSPs: 1)
Name: scaffold1773
Description:

Target: scaffold1773; HSP #1
Raw Score: 245; E-Value: 1e-135
Query Start/End: Original strand, 862 - 1249
Target Start/End: Complemental strand, 1359 - 983
Alignment:
Q  862 aaagaaagaaaaacagtcaaaacgttttttacgtaagaacattaagcttttgggagaaaagggaaaagaagagccagagctagagaggagagcctagaac 961  Q
    |||||| |||||||||||||||||||||| ||||||||| | || ||||| ||||||||||||| ||||||||| ||| | |||||||||||||||||||    
T  1359 aaagaaggaaaaacagtcaaaacgttttt-acgtaagaaaacta-gcttt-gggagaaaagggagaagaagagcaagaacaagagaggagagcctagaac 1263  T
Q  962 cgattcttgctgtctaattttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatag 1061  Q
    |||| |||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | ||||||    
T  1262 cgatccttgctgtcttattttttgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaa-ttgacctaattgcatag 1164  T
Q  1062 ttttgaaaaattaaaataaattgagggttagggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcctcttataatataatgttcaga 1161  Q
    ||||| |||||      |||||||||||||||||||||||| |||| ||||| | |||||||||||||||||||||| ||||| ||||||||||||||||    
T  1163 ttttggaaaat------aaattgagggttagggtttgatgaggattatgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcaga 1070  T
Q  1162 atgaaaacttaatctttgttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatg 1249  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  1069 atgaaaacttaatc-ttgttgttgctgtgatcataaattgattgaaatttatgagtgattggatgaattgatgaatttgtgtatgatg 983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 228; Significance: 1e-125; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 831 - 1237
Target Start/End: Complemental strand, 505 - 109
Alignment:
Q  831 gaaataagggaagttatggtggaagttagaaaaagaaagaaaaacagtcaaaacgttttttacgtaagaacattaagcttttgggagaaaagggaaaaga 930  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| ||  |||||||| ||||    
T  505 gaaataagggaagttatggtaggagttagaaaaagaaagaaaaacagtcaaaacgttttt-acgtaagaacattaatctttttgggaaaaagggagaaga 407  T
Q  931 agagccagagctagagaggagagcctagaaccgattcttgctgtctaattttctgcaaaactaaggtaagggtgagactatctctcaataatcataatct 1030  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  406 agagccaaagctagagaggagagcctagaaccgatccttgctgtctaattttctgcaaaactaaggtaagggtgagactatctctcaataaccataatct 307  T
Q  1031 ataattcctgaaaattgacctagtggcatagttttgaaaaattaaaataaattgagggttagggtttgatgacgattctgaagaggaatgggtaatgatc 1130  Q
    |||||| ||| ||||||||||| | |||||||||||       ||||||||||||||||||||||||||||| ||||||| || ||||||||||||||||    
T  306 ataatttctg-aaattgacctaattgcatagttttg------gaaaataaattgagggttagggtttgatgatgattctg-aggggaatgggtaatgatc 215  T
Q  1131 atgttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaatt 1230  Q
    ||||||||  |||| || |||  |||||||| |||| ||||||||| |||| ||| ||||||||||||||| ||| ||||||||| || |||||| ||||    
T  214 atgttaattttcttgtattatggtgttcagattgaagacttaatctatgttattgatgtgatcataaattggttg-aaattatgattggttggataaatt 116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0924 (Bit Score: 217; Significance: 1e-118; HSPs: 1)
Name: scaffold0924
Description:

Target: scaffold0924; HSP #1
Raw Score: 217; E-Value: 1e-118
Query Start/End: Original strand, 862 - 1249
Target Start/End: Original strand, 624 - 1002
Alignment:
Q  862 aaagaaagaaaaacagtcaaaacgttttttacgtaagaacattaagcttttgggagaaaagggaaaagaagagccagagctagagaggagagcctagaac 961  Q
    |||||||| |||||||||||||| ||||| |||||||||  |  |||||| ||||||||||||| ||||||||| ||| | |||||| |||| |||||||    
T  624 aaagaaaggaaaacagtcaaaacattttt-acgtaagaaact--agctttggggagaaaagggagaagaagagcaagaacaagagagaagagtctagaac 720  T
Q  962 cgattcttgctgtctaattttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatag 1061  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | ||||||    
T  721 cgatccttgctgtcttattttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatag 820  T
Q  1062 ttttgaaaaattaaaataaattgagggttagggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcctcttataatataatgttcaga 1161  Q
    ||||        ||||||||||||||||||||||||||||| |||| ||||| | ||||||||||||||||| |||| ||||| |||||||||||||||     
T  821 tttt-----tggaaaataaattgagggttagggtttgatgaggattatgaagggaaatgggtaatgatcatgataatactcttgtaatataatgttcagg 915  T
Q  1162 atgaaaacttaatctttgttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatg 1249  Q
    || ||||||||||| ||||||||| |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  916 ataaaaacttaatc-ttgttgttgatgtgatcataaactgattgaaatttatgagtgattggatgaattgatgaatttgtgtatgatg 1002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 199; Significance: 1e-108; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 862 - 1208
Target Start/End: Complemental strand, 112064 - 111726
Alignment:
Q  862 aaagaaagaaaaacagtcaaaacgttttttacgtaagaacattaagcttttgggagaaaa-gggaaaagaagagccagagctagagaggagagcctagaa 960  Q
    ||||||||||||||||||| ||||||||  |||||||||  |  |||||| ||||||||| |||| ||||||||| ||| | ||||||| ||||||||||    
T  112064 aaagaaagaaaaacagtcagaacgtttta-acgtaagaaact--agctttggggagaaaaagggagaagaagagcaagaacaagagagg-gagcctagaa 111969  T
Q  961 ccgattcttgctgtctaattttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctg-aaaattgacctagtggcat 1059  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| | ||||    
T  111968 ccgatccttgctgtctaattttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaaattgacctaattgcat 111869  T
Q  1060 agttttgaaaaattaaaataaattgagggttagggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcctcttataatataatgttca 1159  Q
    |||||||       || |||||||||||||||||||||||||| |||||||||| | |||||||||||||||||||||| ||||| ||||||||||||||    
T  111868 agttttg------gaagataaattgagggttagggtttgatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttca 111775  T
Q  1160 gaatgaaaacttaatctttgttgttgctgtgatcataaattgattgaaa 1208  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  111774 gaatgaaaacttaatctttgttgctgctgtgatcataaattgattgaaa 111726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 863 - 974
Target Start/End: Complemental strand, 116965 - 116858
Alignment:
Q  863 aagaaagaaaaacagtcaaaacgttttttacgtaagaacattaagcttttgggagaaaagggaaaagaagagccagagctagagaggagagcctagaacc 962  Q
    |||||||||||||||||| |||| |||| |||||||||  |  |||||| ||||||||||||| |||||| || ||| | ||||||| ||||||||||||    
T  116965 aagaaagaaaaacagtcagaacg-ttttgacgtaagaaact--agctttggggagaaaagggagaagaagggcaagaacaagagagg-gagcctagaacc 116870  T
Q  963 gattcttgctgt 974  Q
    ||| ||||||||    
T  116869 gatccttgctgt 116858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 194; Significance: 1e-105; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 864 - 1249
Target Start/End: Original strand, 13122792 - 13123166
Alignment:
Q  864 agaaagaaaaacagtcaaaacgttttttacgtaagaacattaagcttttgggagaaaagggaaaagaagagccagagctagagaggagagcctagaaccg 963  Q
    ||||||||||||||||| ||||||||  |||||||||  |  |||||||||||||||||||| ||||||||| ||| | ||||||  |||||||||||||    
T  13122792 agaaagaaaaacagtcagaacgtttta-acgtaagaaact--agcttttgggagaaaagggagaagaagagcaagaacaagagagt-gagcctagaaccg 13122887  T
Q  964 attcttgctgtctaattttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagtt 1063  Q
    || ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| | ||||||||    
T  13122888 atccttgctgtctaattt-ctgcaaaactaaggtaagggtgagactatctctcaataatcataatttataattcctg-aaattgacctaattgcatagtt 13122985  T
Q  1064 ttgaaaaattaaaataaattgagggttagggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcct-cttataatataatgttcagaa 1162  Q
    |||       ||||||||||||||||||||||||||||| |||| ||||||| |||||||||||||||||||||| ||  || |||||||||||||||||    
T  13122986 ttg------gaaaataaattgagggttagggtttgatgatgattatgaagagaaatgggtaatgatcatgttaattctatttgtaatataatgttcagaa 13123079  T
Q  1163 tgaaaacttaatctttgttgttgctgtgatcataaattga-ttgaaaattatgagtgattggatgaattgatgaatttgtgtatgatg 1249  Q
    |  |||||||||| ||||||||||||||||| |||| ||| ||| || ||||||||||||||||||||||||||||||||||||||||    
T  13123080 tataaacttaatc-ttgttgttgctgtgatcgtaaactgatttggaatttatgagtgattggatgaattgatgaatttgtgtatgatg 13123166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 979 - 1249
Target Start/End: Complemental strand, 15168243 - 15167979
Alignment:
Q  979 ttttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagttttgaaaaattaaaat 1078  Q
    |||||| | ||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| | ||||||||||| || ||          
T  15168243 ttttcttctaaattaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagat------ 15168150  T
Q  1079 aaattgagggttagggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcctcttataatataatgttcagaatgaaaacttaatcttt 1178  Q
    |||||||||||||||||||||||| |||||||||| | |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  15168149 aaattgagggttagggtttgatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatcttt 15168050  T
Q  1179 gttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatg 1249  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15168049 gttgctgctgtgatcataaattgattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatg 15167979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 987 - 1249
Target Start/End: Complemental strand, 18873420 - 18873164
Alignment:
Q  987 aaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagttttgaaaaattaaaataaattgag 1086  Q
    ||||||||||||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||| | ||||||||||| || ||      ||||||||    
T  18873420 aaaactaaggtaagggtgagactttctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagat------aaattgag 18873327  T
Q  1087 ggttagggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgc 1186  Q
    |||||||||||||||| |||||||||| | |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| |||    
T  18873326 ggttagggtttgatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgc 18873227  T
Q  1187 tgtgatcataaattgattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatg 1249  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18873226 tgtgatcataaattgattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatg 18873164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 184; E-Value: 6e-99
Query Start/End: Original strand, 864 - 1249
Target Start/End: Original strand, 12709724 - 12710095
Alignment:
Q  864 agaaagaaaaacagtcaaaacgttttttacgtaagaacattaagcttttgggagaaaagggaaaagaagagccagagctagagaggagagcctagaaccg 963  Q
    ||||||||||||||||| ||||||||  |||||||||  |  |||||||| |||||||||||   ||||||| ||| | ||||||  |||||||||||||    
T  12709724 agaaagaaaaacagtcagaacgtttta-acgtaagaaact--agcttttgcgagaaaaggga---gaagagcaagaacaagagagt-gagcctagaaccg 12709816  T
Q  964 attcttgctgtctaattttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagtt 1063  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| | ||||||||    
T  12709817 attcttgctgtctaattt-ctgcaaaactaaggtaagggtgagactatctctcaataatcataatttataattcctgaaa-ttgacctaattgcatagtt 12709914  T
Q  1064 ttgaaaaattaaaataaattgagggttagggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcct-cttataatataatgttcagaa 1162  Q
    ||| ||||      ||||||||||||||||||||||||| |||| ||||||| |||||||||||||||||||||| ||  || |||||||||||||||||    
T  12709915 ttggaaaa------taaattgagggttagggtttgatgatgattatgaagagaaatgggtaatgatcatgttaattctatttgtaatataatgttcagaa 12710008  T
Q  1163 tgaaaacttaatctttgttgttgctgtgatcataaattga-ttgaaaattatgagtgattggatgaattgatgaatttgtgtatgatg 1249  Q
    |  |||||||||| ||||||||||||||||| |||| ||| ||| || ||||||||||||||||||||||||||||||||||||||||    
T  12710009 tataaacttaatc-ttgttgttgctgtgatcgtaaactgatttggaatttatgagtgattggatgaattgatgaatttgtgtatgatg 12710095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 168; E-Value: 2e-89
Query Start/End: Original strand, 864 - 1237
Target Start/End: Complemental strand, 13743886 - 13743526
Alignment:
Q  864 agaaagaaaaacagtcaaaacgttttttacgtaagaacattaagcttttgggagaaaagggaaaagaagagccagagctagagaggagagcctagaaccg 963  Q
    ||||||||||||||||| ||||||||  |||||||||  |  |||||| ||||||||||||| ||||||||| ||| | ||||||  |||||||||||||    
T  13743886 agaaagaaaaacagtcagaacgtttta-acgtaagaaact--agctttggggagaaaagggagaagaagagcaagaacaagagagt-gagcctagaaccg 13743791  T
Q  964 attcttgctgtctaattttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagtt 1063  Q
    || ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| | ||||||||    
T  13743790 atccttgctgtctaattt-ctgcaaaactaaggtaagggtgagactatctctcaataatcataatttataattcctg-aaattgacctaattgcatagtt 13743693  T
Q  1064 ttgaaaaattaaaataaattgagggttagggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcctcttataatataatgttcagaat 1163  Q
    |||       ||||||||||||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||  |||| || |||  |||||||| |    
T  13743692 ttg------gaaaataaattgagggttagggtttgatgatgattatgaagagaaatgggtaatgatcatgttaattttcttgtattatgctgttcagatt 13743599  T
Q  1164 gaaaacttaatctttgttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattgatgaat 1237  Q
    ||| ||||||||| |||| ||||||||||||||||||| ||| ||||||||  || |||||| |||||||||||    
T  13743598 gaagacttaatctatgttattgctgtgatcataaattggttg-aaattatgcttggttggataaattgatgaat 13743526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 166; E-Value: 3e-88
Query Start/End: Original strand, 996 - 1249
Target Start/End: Original strand, 10895795 - 10896042
Alignment:
Q  996 gtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagttttgaaaaattaaaataaattgagggttagggt 1095  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||||||||||| | ||||||||||   ||      |||||||| ||||||||||    
T  10895795 gtaagggtgagactatctctcaataatcataatctataatttttgaaaattgacctaattgcatagtttttggaag-----ataaattgtgggttagggt 10895889  T
Q  1096 ttgatgacgattctgaagaggaatgggtaatgatcatgttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcat 1195  Q
    ||||||| |||||||| | |||||||||| ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  10895890 ttgatgatgattctgagg-ggaatgggtattgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcat 10895988  T
Q  1196 aaattgattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatg 1249  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10895989 aaattgattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatg 10896042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 138; E-Value: 2e-71
Query Start/End: Original strand, 988 - 1249
Target Start/End: Complemental strand, 14423043 - 14422789
Alignment:
Q  988 aaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagttttgaaaaattaaaataaattgagg 1087  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||   ||      |||||||||||    
T  14423043 aaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaag-----ataaattgagg 14422949  T
Q  1088 gttagggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgct 1187  Q
    ||||||||||||||| |||||||| | |||||||||| ||||||||||||| || || |||| ||||||| |||||||||||||||||| | |||||| |    
T  14422948 gttagggtttgatgatgattctgagg-ggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatattgttgtt 14422850  T
Q  1188 gtgatcataaattgattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatg 1249  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||||||  | |||||||||    
T  14422849 gtgatcataaattgattg-aaattatgattgattggatgaattgatgaagatttgtatgatg 14422789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 119; E-Value: 4e-60
Query Start/End: Original strand, 992 - 1249
Target Start/End: Complemental strand, 16009631 - 16009382
Alignment:
Q  992 taaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagttttgaaaaattaaaataaattgagggtta 1091  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | |||| |||||| || ||      |||||| ||||||    
T  16009631 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatggttttggaagat------aaattgtgggtta 16009538  T
Q  1092 gggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtga 1191  Q
     |||||||||| |||||||| | |||||||||| ||||||||||||| || || |||| ||||||| |||||||||||||||||| |  ||||| |||||    
T  16009537 aggtttgatgatgattctgagg-ggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactgttgttgtga 16009439  T
Q  1192 tcataaattgattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatg 1249  Q
    ||||||| |||||| ||||||||| ||||||||||||||||||||  | |||||||||    
T  16009438 tcataaactgattg-aaattatgattgattggatgaattgatgaagatttgtatgatg 16009382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 110; E-Value: 8e-55
Query Start/End: Original strand, 917 - 1207
Target Start/End: Original strand, 12590568 - 12590851
Alignment:
Q  917 gaaaagggaaaagaagagccagagctagagaggagagcctagaac-cgattcttgctgtctaattttctgcaaaactaaggtaagggtgagactatctct 1015  Q
    ||||||||| ||||||||| ||||||| ||||||||||||||||  |||| |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  12590568 gaaaagggagaagaagagcaagagctacagaggagagcctagaaatcgatccttgttgtctaattttctgcaaaactaaggtaagggtgagactatctct 12590667  T
Q  1016 caataatcataatctataattcctgaaaattgacctagtggcatagttttgaaaaattaaaataaattgagggttagggtttgatgacgattctgaagag 1115  Q
    ||||||||||||||||||||| ||| ||||||||||| | | ||||||||| |||||   ||||   |||  ||||||||||||||| ||||||||   |    
T  12590668 caataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaat---aata---tgaaagttagggtttgatgatgattctga--tg 12590758  T
Q  1116 gaatgggtaatgatcatgttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtgat-cataaattgattgaa 1207  Q
    ||||| |||| ||| |||||| |  ||||  ||| ||||||| ||||||||| |||||||  |||||||||||| || ||| |||||||||||    
T  12590759 gaatgagtaaagatgatgttagttttcttggaatttaatgttaagaatgaaagcttaatccatgttgttgctgtaatccattaattgattgaa 12590851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 103; E-Value: 1e-50
Query Start/End: Original strand, 917 - 1207
Target Start/End: Complemental strand, 13007562 - 13007280
Alignment:
Q  917 gaaaagggaaaagaagagccagagctagagaggagagcctagaac-cgattcttgctgtctaattttctgcaaaactaaggtaagggtgagactatctct 1015  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||  |||| |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  13007562 gaaaagggagaagaagagcaagagctagagaggagagcctagaaatcgatccttgttgtctaattttctgcaaaactaaggtaagggtgagactatctct 13007463  T
Q  1016 caataatcataatctataattcctgaaaattgacctagtggcatagttttgaaaaattaaaataaattgagggttagggtttgatgacgattctgaagag 1115  Q
    ||||||||||||||||||||| ||| ||||||||||| | | |||||||||       |||||||  |||  ||||||||||||||| ||||||||   |    
T  13007462 caataatcataatctataatttctg-aaattgacctaattgaatagttttg------gaaaataagatgaaagttagggtttgatgatgattctga--tg 13007372  T
Q  1116 gaatgggtaatgatcatgttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtgat-cataaattgattgaa 1207  Q
    ||||| |||| ||| |||||| |  ||||  ||| ||||||| |||| |||| |||||||  |||||||||||| || ||| |||||||||||    
T  13007371 gaatgagtaaagatgatgttagt-ttcttggaatttaatgttaagaacgaaatcttaatccatgttgttgctgtaatccatgaattgattgaa 13007280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 994 - 1194
Target Start/End: Complemental strand, 16677348 - 16677152
Alignment:
Q  994 aggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagttttgaaaaattaaaataaattgagggttagg 1093  Q
    ||||||||||||||||||||||||||||||||||||||||||| || |||||||||||| | ||||||||||   ||  ||    ||||| |||||||||    
T  16677348 aggtaagggtgagactatctctcaataatcataatctataatttctaaaaattgacctaattgcatagtttttggaagata----aaattaagggttagg 16677253  T
Q  1094 gtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtgatc 1193  Q
    ||||||||| |||| ||| |||||  | ||||||||||||||||   | || |||  | ||||||||||||||  | |||||| |  |||||||||||||    
T  16677252 gtttgatgatgattttgaggaggatggtgtaatgatcatgttaaatatgttgtaaagtgatgttcagaatgaattcctaatctataatgttgctgtgatc 16677153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 994 - 1194
Target Start/End: Complemental strand, 17651584 - 17651388
Alignment:
Q  994 aggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagttttgaaaaattaaaataaattgagggttagg 1093  Q
    ||||||||||||||||||||||||||||||||||||||||||| || |||||||||||| | ||||||||||   ||  ||    ||||| |||||||||    
T  17651584 aggtaagggtgagactatctctcaataatcataatctataatttctaaaaattgacctaattgcatagtttttggaagata----aaattaagggttagg 17651489  T
Q  1094 gtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtgatc 1193  Q
    ||||||||| |||| ||| |||||  | ||||||||||||||||   | || |||  | ||||||||||||||  | |||||| |  |||||||||||||    
T  17651488 gtttgatgatgattttgaggaggatggtgtaatgatcatgttaaatatgttgtaaagtgatgttcagaatgaattcctaatctataatgttgctgtgatc 17651389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 943 - 1047
Target Start/End: Original strand, 21230910 - 21231015
Alignment:
Q  943 agagaggagagcctag-aaccgattcttgctgtctaat-tttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctg 1040  Q
    |||||| ||||||||| |||||||| |||||||  ||| |||||||||| |||||||||||||||||||||||||||||||||||| | ||||||| |||    
T  21230910 agagagaagagcctaggaaccgatt-ttgctgtgcaatctttctgcaaatctaaggtaagggtgagactatctctcaataatcatagtatataatttctg 21231008  T
Q  1041 aaaattg 1047  Q
    |||||||    
T  21231009 aaaattg 21231015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 854 - 1047
Target Start/End: Complemental strand, 148811 - 148619
Alignment:
Q  854 agttagaaaaagaaagaaaaacagtcaaaacgttttttacgtaagaacattaagcttttgggagaaaagggaaaagaagagccagagctagagaggagag 953  Q
    ||||||||||||||||||||||||||| |||| |||| ||||||||| | | |||||||||||||||||||| ||| ||||| ||| | ||||||||| |    
T  148811 agttagaaaaagaaagaaaaacagtcataacg-ttttaacgtaagaaaact-agcttttgggagaaaagggagaaggagagcaagaacaagagaggaggg 148714  T
Q  954 ccta-gaaccgattcttgctgtctaat-tttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattg 1047  Q
    | || |||| ||||  || ||| ||||  |||||||||||||||||||||||||| ||| |  ||||| || ||||| |||  || ||||||||||    
T  148713 cttaggaactgatt-gtgttgtgtaatcattctgcaaaactaaggtaagggtgaggctaaccttcaatgattataatatatggtttctgaaaattg 148619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 992 - 1047
Target Start/End: Original strand, 11382871 - 11382926
Alignment:
Q  992 taaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattg 1047  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  11382871 taaggtaagggtgagactatctctcaataatcataatatataatttctgaaaattg 11382926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 992 - 1047
Target Start/End: Original strand, 11389348 - 11389403
Alignment:
Q  992 taaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattg 1047  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  11389348 taaggtaagggtgagactatctctcaataatcataatatataatttctgaaaattg 11389403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 862 - 1006
Target Start/End: Complemental strand, 1613731 - 1613588
Alignment:
Q  862 aaagaaagaaaaacagtcaaaacgttttttacgtaagaacattaagcttttgggagaaaagggaaaagaagagccagagctagagaggagagccta-gaa 960  Q
    ||||||||||||  ||||| ||||||||| ||||||||| | |||||||||||||||||||||| | ||||||| ||| | ||||||||||||||| |||    
T  1613731 aaagaaagaaaag-agtcagaacgttttt-acgtaagaaaactaagcttttgggagaaaagggagatgaagagcaagaacaagagaggagagcctaggaa 1613634  T
Q  961 ccgattcttgctgtctaat-tttctgcaaaactaaggtaagggtgag 1006  Q
    |||||| |||||||  ||| ||| ||| |  ||||||||||||||||    
T  1613633 ccgatt-ttgctgtgcaatctttttgcgattctaaggtaagggtgag 1613588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 980 - 1047
Target Start/End: Original strand, 20311038 - 20311107
Alignment:
Q  980 tttctgcaaaa--ctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattg 1047  Q
    |||||||||||  |||||||||||||||||||||||||||||||||||||  ||||||| ||||||||||    
T  20311038 tttctgcaaaaatctaaggtaagggtgagactatctctcaataatcataacgtataatttctgaaaattg 20311107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 854 - 925
Target Start/End: Complemental strand, 16677490 - 16677422
Alignment:
Q  854 agttagaaaaagaaagaaaaacagtcaaaacgttttttacgtaagaacattaagcttttgggagaaaaggga 925  Q
    |||||||||||||||||||| |||||| ||||||||| ||||||||| | || |||||||||||||||||||    
T  16677490 agttagaaaaagaaagaaaa-cagtcagaacgttttt-acgtaagaaaacta-gcttttgggagaaaaggga 16677422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 854 - 925
Target Start/End: Complemental strand, 17651726 - 17651658
Alignment:
Q  854 agttagaaaaagaaagaaaaacagtcaaaacgttttttacgtaagaacattaagcttttgggagaaaaggga 925  Q
    |||||||||||||||||||| |||||| ||||||||| ||||||||| | || |||||||||||||||||||    
T  17651726 agttagaaaaagaaagaaaa-cagtcagaacgttttt-acgtaagaaaacta-gcttttgggagaaaaggga 17651658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 986 - 1027
Target Start/End: Original strand, 831628 - 831669
Alignment:
Q  986 caaaactaaggtaagggtgagactatctctcaataatcataa 1027  Q
    ||||||||||||||||||||||||| ||||||||||| ||||    
T  831628 caaaactaaggtaagggtgagactaactctcaataattataa 831669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 986 - 1027
Target Start/End: Original strand, 1196808 - 1196849
Alignment:
Q  986 caaaactaaggtaagggtgagactatctctcaataatcataa 1027  Q
    ||||||||||||||||||||||||| ||||||||||| ||||    
T  1196808 caaaactaaggtaagggtgagactaactctcaataattataa 1196849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 986 - 1027
Target Start/End: Complemental strand, 34958619 - 34958578
Alignment:
Q  986 caaaactaaggtaagggtgagactatctctcaataatcataa 1027  Q
    ||||||||||||||||||||||||| ||||||||||| ||||    
T  34958619 caaaactaaggtaagggtgagactaactctcaataattataa 34958578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 992 - 1048
Target Start/End: Complemental strand, 13679548 - 13679492
Alignment:
Q  992 taaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattga 1048  Q
    |||||||||||||||||||||| ||||| ||||| || |||||||  ||||||||||    
T  13679548 taaggtaagggtgagactatctttcaatgatcatgatatataatttttgaaaattga 13679492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 991 - 1046
Target Start/End: Complemental strand, 2971309 - 2971254
Alignment:
Q  991 ctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaatt 1046  Q
    |||||||||||||| || ||||| |||||| ||||||| ||||||| |||||||||    
T  2971309 ctaaggtaagggtgggattatctttcaatagtcataatttataatttctgaaaatt 2971254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 991 - 1046
Target Start/End: Original strand, 20906461 - 20906516
Alignment:
Q  991 ctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaatt 1046  Q
    |||||||||||||| || ||||| |||||| ||||||| ||||||| |||||||||    
T  20906461 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 20906516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 992 - 1022
Target Start/End: Complemental strand, 11311113 - 11311083
Alignment:
Q  992 taaggtaagggtgagactatctctcaataat 1022  Q
    |||||||||||||||||||||||||||||||    
T  11311113 taaggtaagggtgagactatctctcaataat 11311083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 860 - 934
Target Start/End: Complemental strand, 14567402 - 14567330
Alignment:
Q  860 aaaaagaaagaaaaacagtcaaaacgttttttacgtaagaacattaagcttttgggagaaaagggaaaagaagag 934  Q
    ||||||||||||||||||||  |||| |||| ||||||||| | | |||||||||||||||||||| ||| ||||    
T  14567402 aaaaagaaagaaaaacagtctgaacg-ttttaacgtaagaaaact-agcttttgggagaaaagggagaaggagag 14567330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 190; Significance: 1e-102; HSPs: 13)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 190; E-Value: 1e-102
Query Start/End: Original strand, 864 - 1249
Target Start/End: Complemental strand, 23866792 - 23866418
Alignment:
Q  864 agaaagaaaaacagtcaaaacgttttttacgtaagaacattaagcttttgggagaaaagggaaaagaagagccagagctagagaggagagcctagaaccg 963  Q
    ||||||||||||||||| ||||||||  |||||||||  |  |||||||||||||||||||| ||||||||| ||| | ||||||  |||||||||||||    
T  23866792 agaaagaaaaacagtcagaacgtttta-acgtaagaaact--agcttttgggagaaaagggagaagaagagcaagaacaagagagt-gagcctagaaccg 23866697  T
Q  964 attcttgctgtctaattttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagtt 1063  Q
    || ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| | ||||||||    
T  23866696 atccttgctgtctaattt-ctgcaaaactaaggtaagggtgagactatctctcaataatcataatttataattcctg-aaattgacctaattgcatagtt 23866599  T
Q  1064 ttgaaaaattaaaataaattgagggttagggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcct-cttataatataatgttcagaa 1162  Q
    |||       ||||||||||||||||||||||||||||| |||| ||||||| |||||||||||||||||||||| ||  || |||||||||||||||||    
T  23866598 ttg------gaaaataaattgagggttagggtttgatgatgattatgaagagaaatgggtaatgatcatgttaattctatttgtaatataatgttcagaa 23866505  T
Q  1163 tgaaaacttaatctttgttgttgctgtgatcataaattga-ttgaaaattatgagtgattggatgaattgatgaatttgtgtatgatg 1249  Q
    |  |||||||||| ||||||||||| ||||| |||| ||| ||| || ||||||||||||||||||||||||||||||||||||||||    
T  23866504 tataaacttaatc-ttgttgttgctctgatcgtaaactgatttggaatttatgagtgattggatgaattgatgaatttgtgtatgatg 23866418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 140; E-Value: 1e-72
Query Start/End: Original strand, 994 - 1249
Target Start/End: Original strand, 8727735 - 8727984
Alignment:
Q  994 aggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagttttgaaaaattaaaataaattgagggttagg 1093  Q
    |||||||||||||| |||| ||||||||||||||||||||||| ||||||||||||||| | ||||||||||   ||      |||||||||||||||||    
T  8727735 aggtaagggtgagattatccctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaag-----ataaattgagggttagg 8727829  T
Q  1094 gtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtgatc 1193  Q
    |||||| || |||||||| | || ||||||| ||||||||||||| || || |||| |||||||||||||||||||||||||| |  ||||| |||||||    
T  8727830 gtttgacgatgattctgagg-ggtatgggtattgatcatgttaattctgttgtaatgtaatgttcagaatgaaaacttaatctatactgttgttgtgatc 8727928  T
Q  1194 ataaattgattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatg 1249  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8727929 ataaattgattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatg 8727984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 132; E-Value: 6e-68
Query Start/End: Original strand, 991 - 1249
Target Start/End: Complemental strand, 44477678 - 44477428
Alignment:
Q  991 ctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagttttgaaaaattaaaataaattgagggtt 1090  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||| |||||      ||||||||||||    
T  44477678 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaat------aaattgagggtt 44477585  T
Q  1091 agggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtg 1190  Q
    |||||||||||| |||| ||| | |||||||||| ||||||||||||| || || |||  ||||||| |||||||||||||||||| |  ||||| ||||    
T  44477584 agggtttgatgatgattttgagg-ggaatgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatctatactgttgttgtg 44477486  T
Q  1191 atcataaattgattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatg 1249  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||||  | |||||||||    
T  44477485 atcataaattgattg-aaattatgattgattggatgaattgatgaagatttgtatgatg 44477428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 132; E-Value: 6e-68
Query Start/End: Original strand, 991 - 1249
Target Start/End: Complemental strand, 44492836 - 44492586
Alignment:
Q  991 ctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagttttgaaaaattaaaataaattgagggtt 1090  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||| |||||      ||||||||||||    
T  44492836 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaat------aaattgagggtt 44492743  T
Q  1091 agggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtg 1190  Q
    |||||||||||| |||| ||| | |||||||||| ||||||||||||| || || |||  ||||||| |||||||||||||||||| |  ||||| ||||    
T  44492742 agggtttgatgatgattttgagg-ggaatgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatctatactgttgttgtg 44492644  T
Q  1191 atcataaattgattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatg 1249  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||||  | |||||||||    
T  44492643 atcataaattgattg-aaattatgattgattggatgaattgatgaagatttgtatgatg 44492586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 106; E-Value: 2e-52
Query Start/End: Original strand, 854 - 1249
Target Start/End: Original strand, 27940715 - 27941104
Alignment:
Q  854 agttagaaaaagaaagaaaaacagtcaaaacgttttttacgtaagaacattaagcttttgggagaaaagggaaaagaagagccagagctagagaggagag 953  Q
    ||||||||||||||||||||||||||| ||||||||  ||||| ||| | || ||||||||||||||||||| ||||||||| ||| | ||||||||| |    
T  27940715 agttagaaaaagaaagaaaaacagtcagaacgtttta-acgtatgaaaacta-gcttttgggagaaaagggagaagaagagcaagaacaagagaggaggg 27940812  T
Q  954 cctag-aaccgattcttgctgtctaatt-ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacct 1051  Q
    | ||| |||||||| | ||||| ||||  |||||||||||||||||||||||||| ||| |  ||||| || ||||| ||| ||| ||||||||||        
T  27940813 cttaggaaccgattgt-gctgtgtaatcattctgcaaaactaaggtaagggtgaggctaaccttcaatgattataatatatgatttctgaaaattgtttg 27940911  T
Q  1052 agtggcatagtt-ttgaaaaattaaaataaattgagggttagggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcctcttataata 1150  Q
    | | | || ||| ||||||||| | |||    || |  |||||||||||||| |||||||| | |||||||||| ||||||||||||| || || ||||     
T  27940912 attagaattgttcttgaaaaataagaat----tgggaattagggtttgatgatgattctgagg-ggaatgggtattgatcatgttaattctgttgtaatg 27941006  T
Q  1151 taatgttcagaatgaaaacttaatctttgttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatg 1249  Q
    |||||||||||||||||| ||||||| |  ||||| | ||||||||||||||||| ||||||||| ||||||||||||||||||||  | |||||||||    
T  27941007 taatgttcagaatgaaaatttaatctatactgttgttatgatcataaattgattg-aaattatgattgattggatgaattgatgaagatttgtatgatg 27941104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 91; E-Value: 2e-43
Query Start/End: Original strand, 917 - 1207
Target Start/End: Complemental strand, 17054720 - 17054439
Alignment:
Q  917 gaaaagggaaaagaagagccagagctagagaggagagcctagaac-cgattcttgctgtctaattttctgcaaaactaaggtaagggtgagactatctct 1015  Q
    ||||||||| ||||||||| |||||||||||| |||||||||||  ||||  |||||||||||||| ||||||||| |||||||||||||||||||||||    
T  17054720 gaaaagggagaagaagagcaagagctagagagtagagcctagaaatcgatcattgctgtctaattt-ctgcaaaaccaaggtaagggtgagactatctct 17054622  T
Q  1016 caataatcataatctataattcctgaaaattgacctagtggcatagttttgaaaaattaaaataaattgagggttagggtttgatgacgattctgaagag 1115  Q
    ||||||||||||||||||||||||| ||||||||||| | | |||||||||       |||||||  |||  ||||||||||||||| ||||||||   |    
T  17054621 caataatcataatctataattcctg-aaattgacctaattgaatagttttg------gaaaataagatgaaagttagggtttgatgatgattctga--tg 17054531  T
Q  1116 gaatgggtaatgatcatgttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtgat-cataaattgattgaa 1207  Q
    ||||| |||| ||| |||||| |  ||||  ||| ||||||| |||| |||| |||||||  |||||||||||| || ||| |||||||||||    
T  17054530 gaatgagtaaagatgatgttagt-ttcttggaatttaatgttaagaacgaaatcttaatccatgttgttgctgtaatccatgaattgattgaa 17054439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 979 - 1048
Target Start/End: Complemental strand, 18614340 - 18614271
Alignment:
Q  979 ttttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattga 1048  Q
    |||||| | ||| |||||||||||||||||||||||||||||||||| || ||||||| |||||||||||    
T  18614340 ttttcttctaaattaaggtaagggtgagactatctctcaataatcatgatatataatttctgaaaattga 18614271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 992 - 1048
Target Start/End: Original strand, 23482053 - 23482109
Alignment:
Q  992 taaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattga 1048  Q
    ||||||||||||||||||||||||||||||||||| | ||||||| |||||||||||    
T  23482053 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattga 23482109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 980 - 1047
Target Start/End: Original strand, 14056552 - 14056619
Alignment:
Q  980 tttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattg 1047  Q
    |||||||||| |||||||||||||||||||||||||||||||| ||| | | ||| | ||||||||||    
T  14056552 tttctgcaaatctaaggtaagggtgagactatctctcaataataatagtatgtaaattctgaaaattg 14056619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 992 - 1048
Target Start/End: Complemental strand, 39364975 - 39364919
Alignment:
Q  992 taaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattga 1048  Q
    ||||||||||||||||||||||||||||||| ||| | || |||| |||||||||||    
T  39364975 taaggtaagggtgagactatctctcaataataatagtatagaatttctgaaaattga 39364919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 980 - 1047
Target Start/End: Complemental strand, 25112043 - 25111976
Alignment:
Q  980 tttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattg 1047  Q
    ||||| |||| |||||||||||||||||||||||||||||||| ||| | | ||| | ||||||||||    
T  25112043 tttctacaaatctaaggtaagggtgagactatctctcaataataatagtatgtaaattctgaaaattg 25111976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 979 - 1046
Target Start/End: Original strand, 29643373 - 29643440
Alignment:
Q  979 ttttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaatt 1046  Q
    |||||| | ||| |||||||||||||||| ||||| |||||||||||||| | ||||| |||||||||    
T  29643373 ttttcttctaaattaaggtaagggtgagattatctttcaataatcataatatgtaatttctgaaaatt 29643440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 991 - 1046
Target Start/End: Original strand, 24320670 - 24320725
Alignment:
Q  991 ctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaatt 1046  Q
    |||||||||||||| || ||||| |||||| ||||||| ||||||| |||||||||    
T  24320670 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 24320725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 189; Significance: 1e-102; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 831 - 1249
Target Start/End: Complemental strand, 26584042 - 26583632
Alignment:
Q  831 gaaataagggaagttatggtggaagttagaaaaagaaagaaaaacagtcaaaacgttttttacgtaagaacattaagcttttgggagaaaagggaaaaga 930  Q
    |||||||||||||||||| | | ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||  |||||||| ||||    
T  26584042 gaaataagggaagttatgataggagttagaaaaagaaagaaaaacagtcaaaacgttttt-acgtaagaacattaagctttttgggaaaaagggagaaga 26583944  T
Q  931 agagccagagctagagaggagagccta-gaaccgattcttgctgtctaattttctgcaaaactaaggtaagggtgagactatctctcaataatcataatc 1029  Q
    ||||||| ||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26583943 agagccaaagctagagaggagagcctaagaaccgatccttgctgtctaattttctgcaaaactaaggtaagggtgagactatctctcaataatcataatc 26583844  T
Q  1030 tataattcctgaaaattgacctagtggcatagttttgaaaaattaaaataaattgagggttagggtttgatgacgattctgaagaggaatgggtaatgat 1129  Q
    ||||||| ||| ||||||||||| | |||||||||||       ||||||||||||||||||||| ||||||| ||||||| || |||| ||||||||||    
T  26583843 tataatttctg-aaattgacctaattgcatagttttg------gaaaataaattgagggttagggcttgatgatgattctg-aggggaaagggtaatgat 26583752  T
Q  1130 catgttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaat 1229  Q
    ||||||||   | || |||  | ||||||||||||||  | |||||| |  |||||||||||||| || |||| |   |||||  | || ||||||||||    
T  26583751 catgttaaatatgttgtaaagtgatgttcagaatgaattcctaatctataatgttgctgtgatcacaatttgaattgtaattagaattggttggatgaat 26583652  T
Q  1230 tgatgaatttgtgtatgatg 1249  Q
    || |||| || |||||||||    
T  26583651 tggtgaaattttgtatgatg 26583632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 132; E-Value: 6e-68
Query Start/End: Original strand, 979 - 1249
Target Start/End: Original strand, 19661441 - 19661703
Alignment:
Q  979 ttttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagttttgaaaaattaaaat 1078  Q
    |||||| | ||| |||||||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||| | ||||||||||| || ||          
T  19661441 ttttcttctaaattaaggtaagggtgagactttctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagat------ 19661534  T
Q  1079 aaattgagggttagggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcctcttataatataatgttcagaatgaaaacttaatcttt 1178  Q
    |||||||||||||||||||||||| |||||||| | |||||||||| ||||||||||||| || || |||| ||||||| |||||||||||||||||| |    
T  19661535 aaattgagggttagggtttgatgatgattctgagg-ggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctat 19661633  T
Q  1179 gttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatg 1249  Q
     |||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||  | |||||||||    
T  19661634 attgttgttgtgatcataaattgattg-aaattatgattgattggatgaattgatgaagatttgtatgatg 19661703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 127; E-Value: 6e-65
Query Start/End: Original strand, 992 - 1249
Target Start/End: Complemental strand, 6483772 - 6483523
Alignment:
Q  992 taaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagttttgaaaaattaaaataaattgagggtta 1091  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||| |||||      |||||||||||||    
T  6483772 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaat------aaattgagggtta 6483679  T
Q  1092 gggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtga 1191  Q
    ||||||||||| |||| ||| | |||||||||| ||||||||||||| || || |||  ||||||| |||||||||||||||||| |  ||||| |||||    
T  6483678 gggtttgatgatgattttgagg-ggaatgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatctatactgttgttgtga 6483580  T
Q  1192 tcataaattgattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatg 1249  Q
    |||||||||||||| ||||||||| |||| |||||||||||||||  | |||||||||    
T  6483579 tcataaattgattg-aaattatgattgatgggatgaattgatgaagatttgtatgatg 6483523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 127; E-Value: 6e-65
Query Start/End: Original strand, 992 - 1249
Target Start/End: Complemental strand, 6487239 - 6486990
Alignment:
Q  992 taaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagttttgaaaaattaaaataaattgagggtta 1091  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||| |||||      |||||||||||||    
T  6487239 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaat------aaattgagggtta 6487146  T
Q  1092 gggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtga 1191  Q
    ||||||||||| |||| ||| | |||||||||| ||||||||||||| || || |||  ||||||| |||||||||||||||||| |  ||||| |||||    
T  6487145 gggtttgatgatgattttgagg-ggaatgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatctatactgttgttgtga 6487047  T
Q  1192 tcataaattgattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatg 1249  Q
    |||||||||||||| ||||||||| |||| |||||||||||||||  | |||||||||    
T  6487046 tcataaattgattg-aaattatgattgatgggatgaattgatgaagatttgtatgatg 6486990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 83; E-Value: 1e-38
Query Start/End: Original strand, 1079 - 1249
Target Start/End: Original strand, 23089137 - 23089305
Alignment:
Q  1079 aaattgagggttagggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcctcttataatataatgttcagaatgaaaacttaatcttt 1178  Q
    |||||||||||||||||||||||| |||||| ||| ||||||||||||||||||||||||  | || |||| | | |||| |||||||| |||||||| |    
T  23089137 aaattgagggttagggtttgatgatgattct-aaggggaatgggtaatgatcatgttaattatgttgtaatgtgacgttcggaatgaaatcttaatctat 23089235  T
Q  1179 gttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatg 1249  Q
      ||||||||||||||||||||||||||||| ||| | |||||||||||||||||||| || |||||||||    
T  23089236 actgttgctgtgatcataaattgattgaaaa-tataattgattggatgaattgatgaagttctgtatgatg 23089305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 75; E-Value: 6e-34
Query Start/End: Original strand, 1079 - 1249
Target Start/End: Original strand, 23101545 - 23101713
Alignment:
Q  1079 aaattgagggttagggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcctcttataatataatgttcagaatgaaaacttaatcttt 1178  Q
    |||||||||||||||||||||||| |||||||| | ||||||||||||||||||||||||  | || |||| | | |||| |||||||| |||||||| |    
T  23101545 aaattgagggttagggtttgatgatgattctgagg-ggaatgggtaatgatcatgttaattatgttgtaatgtgacgttcggaatgaaatcttaatctat 23101643  T
Q  1179 gttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatg 1249  Q
      ||||| ||||||||||||||||||||||| ||| | |||||||||||||| ||||| || |||||||||    
T  23101644 actgttgttgtgatcataaattgattgaaaa-tataattgattggatgaattcatgaagttctgtatgatg 23101713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 65; E-Value: 6e-28
Query Start/End: Original strand, 1078 - 1249
Target Start/End: Complemental strand, 23878982 - 23878813
Alignment:
Q  1078 taaattgagggttagggtttgatgacgattctgaagaggaatggg-taatgatcatgttaatcctcttataatataatgttcagaatgaaaacttaatct 1176  Q
    ||||||||||||||||||| | ||| |||||||| | |||||||| ||||||||||||||||  | || |||| | ||||||||||||||| ||||||||    
T  23878982 taaattgagggttagggtt-gttgatgattctgagg-ggaatggggtaatgatcatgttaattatgttgtaatgtgatgttcagaatgaaatcttaatct 23878885  T
Q  1177 ttgttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatg 1249  Q
     |  ||||| ||||||||||||||||||||||| ||  | |||||||||||||||||||| || |||||||||    
T  23878884 atactgttgttgtgatcataaattgattgaaaa-tagaattgattggatgaattgatgaagttttgtatgatg 23878813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 63; E-Value: 9e-27
Query Start/End: Original strand, 854 - 1006
Target Start/End: Original strand, 6260035 - 6260186
Alignment:
Q  854 agttagaaaaagaaagaaaaacagtcaaaacgttttttacgtaagaacattaagcttttgggagaaaagggaaaagaagagccagagctagagaggagag 953  Q
    ||||||||||||||||||||||||||| |||| |||| ||||||||| | | |||||||||||||||||||| ||||||||| ||| | ||||||||| |    
T  6260035 agttagaaaaagaaagaaaaacagtcagaacg-ttttaacgtaagaaaact-agcttttgggagaaaagggagaagaagagcaagaacaagagaggaggg 6260132  T
Q  954 ccta-gaaccgattcttgctgtctaat-tttctgcaaaactaaggtaagggtgag 1006  Q
    | || |||||||||  |||||| ||||  ||||||||||||||||||||||||||    
T  6260133 cttaggaaccgatt-gtgctgtgtaatcattctgcaaaactaaggtaagggtgag 6260186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 854 - 999
Target Start/End: Original strand, 19664937 - 19665081
Alignment:
Q  854 agttagaaaaagaaagaaaaacagtcaaaacgttttttacgtaagaacattaagcttttgggagaaaagggaaaagaagagccagagctagagaggagag 953  Q
    ||||||||||||||||||||||||||| |||| |||| ||||| ||| | | |||||||||||||||||||| ||||||||| ||| | ||||||||| |    
T  19664937 agttagaaaaagaaagaaaaacagtcagaacg-ttttaacgtacgaaaact-agcttttgggagaaaagggagaagaagagcaagaacaagagaggaggg 19665034  T
Q  954 ccta-gaaccgattcttgctgtctaat-tttctgcaaaactaaggtaa 999  Q
    | || |||||||||  |||||| ||||  |||||||||||||||||||    
T  19665035 cttaggaaccgatt-gtgctgtgtaatcattctgcaaaactaaggtaa 19665081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 991 - 1065
Target Start/End: Original strand, 5706023 - 5706096
Alignment:
Q  991 ctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagtttt 1065  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||| | | ||||||||    
T  5706023 ctaaggtaagggtgagactatctctcattaatcataatctataattcctg-aaattgacctaattgaatagtttt 5706096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 992 - 1048
Target Start/End: Complemental strand, 21908414 - 21908358
Alignment:
Q  992 taaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattga 1048  Q
    |||||||||||||||||||||||||||||||||| || ||||||| |||||||||||    
T  21908414 taaggtaagggtgagactatctctcaataatcatgatatataatttctgaaaattga 21908358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 992 - 1048
Target Start/End: Complemental strand, 23265197 - 23265141
Alignment:
Q  992 taaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattga 1048  Q
    ||||||||||||||||||||||||||||||||||| | ||||||| |||||||||||    
T  23265197 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattga 23265141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 992 - 1048
Target Start/End: Complemental strand, 23280265 - 23280209
Alignment:
Q  992 taaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattga 1048  Q
    ||||||||||||||||||||||||||||||||||| | ||||||| |||||||||||    
T  23280265 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattga 23280209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 854 - 925
Target Start/End: Original strand, 23101323 - 23101391
Alignment:
Q  854 agttagaaaaagaaagaaaaacagtcaaaacgttttttacgtaagaacattaagcttttgggagaaaaggga 925  Q
    |||||||||||||||| |||||||||| |||| |||||||||||||| | | ||||||||||||||||||||    
T  23101323 agttagaaaaagaaag-aaaacagtcagaacg-tttttacgtaagaaaact-agcttttgggagaaaaggga 23101391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 992 - 1048
Target Start/End: Complemental strand, 24661632 - 24661576
Alignment:
Q  992 taaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattga 1048  Q
    ||||||||||||||| ||| ||||| || |||||||| ||||||| |||||||||||    
T  24661632 taaggtaagggtgaggctaactctcgatgatcataatatataatttctgaaaattga 24661576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 991 - 1046
Target Start/End: Complemental strand, 10632 - 10577
Alignment:
Q  991 ctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaatt 1046  Q
    |||||||||||||| || ||||| |||||| ||||||| ||||||| |||||||||    
T  10632 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 10577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 991 - 1046
Target Start/End: Original strand, 25180929 - 25180984
Alignment:
Q  991 ctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaatt 1046  Q
    |||||||||||||| || ||||| |||||| ||||||| ||||||| |||||||||    
T  25180929 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 25180984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 994 - 1052
Target Start/End: Complemental strand, 23879060 - 23879002
Alignment:
Q  994 aggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgaccta 1052  Q
    |||||||||||||||||||||||| |||| || || ||||||| |  ||||||||||||    
T  23879060 aggtaagggtgagactatctctcattaataattatatataatttcgaaaaattgaccta 23879002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 992 - 1052
Target Start/End: Original strand, 23101463 - 23101524
Alignment:
Q  992 taaggtaagggtgagactatctctcaataat-cataatctataattcctgaaaattgaccta 1052  Q
    |||||||||||||||||||||||||| ||||  ||||| | ||||| | |||||||||||||    
T  23101463 taaggtaagggtgagactatctctcattaatagataatatgtaatttcggaaaattgaccta 23101524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 982 - 1063
Target Start/End: Complemental strand, 26885246 - 26885166
Alignment:
Q  982 tctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagtt 1063  Q
    |||||||  |||||||||||||| || ||||| ||||||||| |||| ||||||| ||||||||| | ||| ||| ||||||    
T  26885246 tctgcaattctaaggtaagggtgggattatctttcaataatc-taatgtataatttctgaaaattaatctaatggaatagtt 26885166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 188; Significance: 1e-101; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 987 - 1249
Target Start/End: Complemental strand, 22751201 - 22750945
Alignment:
Q  987 aaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagttttgaaaaattaaaataaattgag 1086  Q
    ||||||||||||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||| | ||||||||||| || ||      ||||||||    
T  22751201 aaaactaaggtaagggtgagactttctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagat------aaattgag 22751108  T
Q  1087 ggttagggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgc 1186  Q
    |||||||||||||||| |||||||||| | |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| |||    
T  22751107 ggttagggtttgatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgc 22751008  T
Q  1187 tgtgatcataaattgattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatg 1249  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22751007 tgtgatcataaattgattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatg 22750945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 142; E-Value: 7e-74
Query Start/End: Original strand, 981 - 1249
Target Start/End: Original strand, 38144526 - 38144786
Alignment:
Q  981 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagttttgaaaaattaaaataa 1080  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | ||||| ||||| |||||      ||    
T  38144526 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaat------aa 38144619  T
Q  1081 attgagggttagggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcctcttataatataatgttcagaatgaaaacttaatctttgt 1180  Q
    |||||||||||||||||||||| |||||||| | |||||||||| ||||||||||||| || || |||| ||||||| |||||||||||||||||| |      
T  38144620 attgagggttagggtttgatgatgattctgagg-ggaatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatac 38144718  T
Q  1181 tgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatg 1249  Q
    ||||| ||||||||||||||||||| |||||| || ||||||||||||||||||||  | |||||||||    
T  38144719 tgttgttgtgatcataaattgattg-aaattacgattgattggatgaattgatgaagatttgtatgatg 38144786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 127; E-Value: 6e-65
Query Start/End: Original strand, 992 - 1249
Target Start/End: Original strand, 28370055 - 28370304
Alignment:
Q  992 taaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagttttgaaaaattaaaataaattgagggtta 1091  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||| |||||      |||||||||||||    
T  28370055 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaat------aaattgagggtta 28370148  T
Q  1092 gggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtga 1191  Q
    ||||||||||| |||| ||| | |||||||||| ||||||||||||| || || |||  ||||||| |||||||||||||||||| |  ||||| |||||    
T  28370149 gggtttgatgatgattttgagg-ggaatgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatctatactgttgttgtga 28370247  T
Q  1192 tcataaattgattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatg 1249  Q
    |||||||||||||| ||||||||| |||| |||||||||||||||  | |||||||||    
T  28370248 tcataaattgattg-aaattatgattgatgggatgaattgatgaagatttgtatgatg 28370304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 122; E-Value: 6e-62
Query Start/End: Original strand, 992 - 1249
Target Start/End: Complemental strand, 19512441 - 19512191
Alignment:
Q  992 taaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagttttgaaaaattaaaataaattgagggtta 1091  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||   ||      |||||||||||||||    
T  19512441 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaag-----ataaattgagggtta 19512347  T
Q  1092 gggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtga 1191  Q
    ||||||||||| |||| ||| | |||||||||| ||||||||||||| || || |||  ||||||| |||||||||||||||||| |  ||||| |||||    
T  19512346 gggtttgatgatgattttgagg-ggaatgggtattgatcatgttaattctattgtaacgtaatgtttagaatgaaaacttaatctatactgttgttgtga 19512248  T
Q  1192 tcataaattgattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatg 1249  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||  | |||||||||    
T  19512247 tcataaattgattg-aaattatgattgattggatgaattgatgaagatttgtatgatg 19512191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 82; E-Value: 4e-38
Query Start/End: Original strand, 920 - 1207
Target Start/End: Complemental strand, 23528759 - 23528478
Alignment:
Q  920 aagggaaaagaagagccagagctagagaggagagcctagaac-cgattctt-gctgtctaattttctgc-aaaactaaggtaagggtgagactatctctc 1016  Q
    |||||| ||||||||||||||||||||||||||||||||||  |||| ||| |||||||| ||| || | ||||||||||||||||||||||||||||||    
T  23528759 aagggagaagaagagccagagctagagaggagagcctagaaatcgatcctttgctgtcta-tttccttctaaaactaaggtaagggtgagactatctctc 23528661  T
Q  1017 aataatcataatctataattcctgaaaattgacctagtggcatagttttgaaaaattaaaataaattgagggttagggtttgatgacgattctgaagagg 1116  Q
    |||||||||||||||||||| ||| ||||||||||| | | |||||||||       |||||||  |||  ||||||||||||||| ||||||||   ||    
T  23528660 aataatcataatctataatttctg-aaattgacctaattgaatagttttg------gaaaataagatgaaagttagggtttgatgatgattctga--tgg 23528570  T
Q  1117 aatgggtaatgatcatgttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtgat-cataaattgattgaa 1207  Q
    |||| |||| ||| |||||| |  ||||  ||| ||||||| |||| |||| |||||||  |||||||||||| || ||| |||||||||||    
T  23528569 aatgagtaaggatgatgttagttttcttggaatttaatgttaagaacgaaatcttaatccatgttgttgctgtaatccatgaattgattgaa 23528478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 72; E-Value: 4e-32
Query Start/End: Original strand, 854 - 1047
Target Start/End: Complemental strand, 42961759 - 42961566
Alignment:
Q  854 agttagaaaaagaaagaaaaacagtcaaaacgttttttacgtaagaacattaagcttttgggagaaaagggaaaagaagagccagagctagagaggagag 953  Q
    ||||||||||||||||||||||||||| ||| ||||| ||||||||| | | |||||||||||||||||||| ||||||||| ||| | ||||||||| |    
T  42961759 agttagaaaaagaaagaaaaacagtcataacatttttaacgtaagaaaact-agcttttgggagaaaagggagaagaagagcaagaacaagagaggaggg 42961661  T
Q  954 ccta-gaaccgattcttgctgtctaat-tttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattg 1047  Q
    | || |||||||||  |||||| ||||  |||||||||||||||||||||||||| ||| |  ||||| || ||||| ||| ||| ||||||||||    
T  42961660 cttaggaaccgatt-gtgctgtgtaatcattctgcaaaactaaggtaagggtgaggctaaccttcaatgattataatatatgatttctgaaaattg 42961566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 9e-21
Query Start/End: Original strand, 980 - 1047
Target Start/End: Original strand, 22438735 - 22438803
Alignment:
Q  980 tttctgcaaaa-ctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattg 1047  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  22438735 tttctgcaaaatctaaggtaagggtgagactatctctcaataatcataatgtataatttctgaaaattg 22438803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 992 - 1048
Target Start/End: Original strand, 18407944 - 18408000
Alignment:
Q  992 taaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattga 1048  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||    
T  18407944 taaggtaagggtgagactatctctcaataatcataatatataatttctgaaaattga 18408000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 992 - 1048
Target Start/End: Original strand, 23111200 - 23111256
Alignment:
Q  992 taaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattga 1048  Q
    ||||||||||||||||||||||||||||||||||| | ||||||| |||||||||||    
T  23111200 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattga 23111256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 991 - 1046
Target Start/End: Complemental strand, 19236955 - 19236900
Alignment:
Q  991 ctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaatt 1046  Q
    |||||||||||||| || ||||| |||||| ||||||| ||||||| |||||||||    
T  19236955 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 19236900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 991 - 1020
Target Start/End: Original strand, 17021913 - 17021942
Alignment:
Q  991 ctaaggtaagggtgagactatctctcaata 1020  Q
    ||||||||||||||||||||||||||||||    
T  17021913 ctaaggtaagggtgagactatctctcaata 17021942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 991 - 1044
Target Start/End: Complemental strand, 22461211 - 22461158
Alignment:
Q  991 ctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaa 1044  Q
    |||||||||||||| || ||||| |||||| ||||||| ||||||| |||||||    
T  22461211 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaa 22461158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 991 - 1044
Target Start/End: Complemental strand, 22467835 - 22467782
Alignment:
Q  991 ctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaa 1044  Q
    |||||||||||||| || ||||| |||||| ||||||| ||||||| |||||||    
T  22467835 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaa 22467782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 188; Significance: 1e-101; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 979 - 1249
Target Start/End: Original strand, 14762745 - 14763009
Alignment:
Q  979 ttttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagttttgaaaaattaaaat 1078  Q
    |||||| | ||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| | ||||||||||| || ||          
T  14762745 ttttcttctaaattaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagat------ 14762838  T
Q  1079 aaattgagggttagggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcctcttataatataatgttcagaatgaaaacttaatcttt 1178  Q
    |||||||||||||||||||||||| |||||||||| | |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  14762839 aaattgagggttagggtttgatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatcttt 14762938  T
Q  1179 gttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatg 1249  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14762939 gttgctgctgtgatcataaattgattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatg 14763009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 175; E-Value: 1e-93
Query Start/End: Original strand, 994 - 1247
Target Start/End: Original strand, 38310802 - 38311049
Alignment:
Q  994 aggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagttttgaaaaattaaaataaattgagggttagg 1093  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||| ||||||||| | ||||||||||| || ||      |||||||||||||||    
T  38310802 aggtaagggtgagactatctctcgataatcataatctataatttctgaatattgacctaattgcatagttttggaagat------aaattgagggttagg 38310895  T
Q  1094 gtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtgatc 1193  Q
    ||||||||| |||||||||| | |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| ||||||||||    
T  38310896 gtttgatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatc 38310995  T
Q  1194 ataaattgattgaaaattatgagtgattggatgaattgatgaatttgtgtatga 1247  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  38310996 ataaattgattgaaaattatgagtgattggatgaatggatgaatttgtgtatga 38311049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 166; E-Value: 3e-88
Query Start/End: Original strand, 994 - 1230
Target Start/End: Original strand, 20247791 - 20248021
Alignment:
Q  994 aggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagttttgaaaaattaaaataaattgagggttagg 1093  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||| || ||      |||||||||||||||    
T  20247791 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaagat------aaattgagggttagg 20247884  T
Q  1094 gtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtgatc 1193  Q
    ||||||||| |||||||||| | ||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||||||| ||||||||||    
T  20247885 gtttgatgatgattctgaagggaaatgggtaatgatcatgttaattttcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatc 20247984  T
Q  1194 ataaattgattgaaaattatgagtgattggatgaatt 1230  Q
    |||||||||||||||||||||||||||||||||||||    
T  20247985 ataaattgattgaaaattatgagtgattggatgaatt 20248021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 135; E-Value: 1e-69
Query Start/End: Original strand, 992 - 1249
Target Start/End: Complemental strand, 9534382 - 9534133
Alignment:
Q  992 taaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagttttgaaaaattaaaataaattgagggtta 1091  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||| |||||      |||||||||||||    
T  9534382 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaat------aaattgagggtta 9534289  T
Q  1092 gggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtga 1191  Q
    ||||||||||| |||||||| | |||||||||| ||||||||||||| || || |||| ||||||| |||||||||||||||||| |  |||||  ||||    
T  9534288 gggtttgatgatgattctga-gtggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactgttgtcgtga 9534190  T
Q  1192 tcataaattgattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatg 1249  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||  | |||||||||    
T  9534189 tcataaattgattg-aaattatgattgattggatgaattgatgaagatttgtatgatg 9534133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 129; E-Value: 4e-66
Query Start/End: Original strand, 994 - 1237
Target Start/End: Complemental strand, 24193009 - 24192771
Alignment:
Q  994 aggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagttttgaaaaattaaaataaattgagggttagg 1093  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||   ||      |||||||||||||||||    
T  24193009 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaag-----ataaattgagggttagg 24192915  T
Q  1094 gtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtg-at 1192  Q
    ||||||||| |||||||||| | |||||||||||||||||||||| || || |||| | |||||||||||||||||||||||| || |||||||||| ||    
T  24192914 gtttgatgatgattctgaagggaaatgggtaatgatcatgttaattctgttgtaatgtgatgttcagaatgaaaacttaatctatgctgttgctgtgaat 24192815  T
Q  1193 cataaattgattgaaaattatgagtgattggatgaattgatgaat 1237  Q
    |||||| |||||||||| ||||| ||||||||| |||||||||||    
T  24192814 cataaactgattgaaaa-tatgattgattggataaattgatgaat 24192771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 123; E-Value: 1e-62
Query Start/End: Original strand, 991 - 1249
Target Start/End: Original strand, 23370505 - 23370756
Alignment:
Q  991 ctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagttttgaaaaattaaaataaattgagggtt 1090  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||   ||      |||||||| |||||    
T  23370505 ctaaggtaagggtgggactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaag-----ataaattgtgggtt 23370599  T
Q  1091 agggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtg 1190  Q
    |||||||||||| |||||||| | |||||||||| ||||||||||||| || || |||| ||||||| |||||||||||||||||| |  ||||| ||||    
T  23370600 agggtttgatgatgattctgagg-ggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactgttgttgtg 23370698  T
Q  1191 atcataaattgattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatg 1249  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||||  | |||||||||    
T  23370699 atcataaattgattg-aaattatgattgattggatgaattgatgaagatttgtatgatg 23370756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 93; E-Value: 1e-44
Query Start/End: Original strand, 917 - 1072
Target Start/End: Original strand, 41455022 - 41455177
Alignment:
Q  917 gaaaagggaaaagaagagccagagctagagaggagagcctagaac-cgattcttgctgtctaattttctgcaaaactaaggtaagggtgagactatctct 1015  Q
    ||||||||| ||||||||| |||||||||||||| |||||||||  |||| |||| ||||||| ||||||||||||||||||||||||||||||||||||    
T  41455022 gaaaagggagaagaagagcaagagctagagaggaaagcctagaaatcgatccttgttgtctaactttctgcaaaactaaggtaagggtgagactatctct 41455121  T
Q  1016 caataatcataatctataattcctgaaaattgacctagtggcatagttttgaaaaat 1072  Q
    ||||||||||||||||||||| ||| ||||||||||| | | ||||||||| |||||    
T  41455122 caataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaat 41455177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 79; E-Value: 3e-36
Query Start/End: Original strand, 1079 - 1249
Target Start/End: Original strand, 55499185 - 55499353
Alignment:
Q  1079 aaattgagggttagggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcctcttataatataatgttcagaatgaaaacttaatcttt 1178  Q
    |||||||||||||||||||||||| |||||||| | ||||||||||||||||||||||||  | || |||| | |||||| |||||||| |||||||| |    
T  55499185 aaattgagggttagggtttgatgatgattctgagg-ggaatgggtaatgatcatgttaattatgttgtaatgtgatgttcggaatgaaatcttaatctat 55499283  T
Q  1179 gttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatg 1249  Q
       |||||||||||||||||||||||||||| ||| | ||||||||||||||||| || || |||||||||    
T  55499284 acagttgctgtgatcataaattgattgaaaa-tataattgattggatgaattgatcaagttttgtatgatg 55499353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 58; E-Value: 9e-24
Query Start/End: Original strand, 862 - 966
Target Start/End: Original strand, 16798569 - 16798673
Alignment:
Q  862 aaagaaagaaaaacagtcaaaacgttttttacgtaagaacattaagcttttgggagaaaagggaaaagaagagccagagctagagaggagagccta-gaa 960  Q
    ||||||||||||||||||| |||||||| |||||||||| | |||||||||||||||||||||| ||||||||| ||| | |||||||||||| || |||    
T  16798569 aaagaaagaaaaacagtcagaacgtttt-tacgtaagaaaactaagcttttgggagaaaagggagaagaagagcaagaacaagagaggagagcttaggaa 16798667  T
Q  961 ccgatt 966  Q
    ||||||    
T  16798668 ccgatt 16798673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 57; E-Value: 4e-23
Query Start/End: Original strand, 991 - 1249
Target Start/End: Original strand, 24933828 - 24934077
Alignment:
Q  991 ctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagttttgaaaaattaaaataaattgagggtt 1090  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| | | ||||||||| |||||   ||||   |||   ||    
T  24933828 ctaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaat---aata---tgaaaatt 24933920  T
Q  1091 agggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtg 1190  Q
    |||||||||||| ||||||||   |||||| |||| ||| |||||| |  |||   ||| ||||||| ||||||||| |||||||  |||||||||||      
T  24933921 agggtttgatgatgattctga--tggaatgagtaaagatgatgttagttttctcggaatttaatgttaagaatgaaagcttaatccatgttgttgctgca 24934018  T
Q  1191 at-cataaattgattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatg 1249  Q
    || ||| ||||||||| || || |||   |||| |||||||||||||| | |||||||||    
T  24934019 atccattaattgattg-aatttttgatgtattgtatgaattgatgaatatttgtatgatg 24934077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 981 - 1051
Target Start/End: Original strand, 16801457 - 16801526
Alignment:
Q  981 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacct 1051  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || ||||||| ||||||||||||||    
T  16801457 ttctgcaaaactaaggtaagggtgagactatctctcaataatcat-atatataatttctgaaaattgacct 16801526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 992 - 1048
Target Start/End: Complemental strand, 18929300 - 18929244
Alignment:
Q  992 taaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattga 1048  Q
    |||||||||||||||||||||||||||||||||| || ||||||| |||||||||||    
T  18929300 taaggtaagggtgagactatctctcaataatcatgatatataatttctgaaaattga 18929244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 854 - 934
Target Start/End: Original strand, 23370356 - 23370434
Alignment:
Q  854 agttagaaaaagaaagaaaaacagtcaaaacgttttttacgtaagaacattaagcttttgggagaaaagggaaaagaagag 934  Q
    ||||||||||||||||||||||||||| |||| |||| ||||||||| ||| |||||||||||||||||||| ||| ||||    
T  23370356 agttagaaaaagaaagaaaaacagtcataacg-ttttaacgtaagaaaatt-agcttttgggagaaaagggagaaggagag 23370434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 992 - 1048
Target Start/End: Original strand, 17240513 - 17240569
Alignment:
Q  992 taaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattga 1048  Q
    |||||||||||||||||||||||||||||||| ||||  |||||| |||||||||||    
T  17240513 taaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaattga 17240569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 991 - 1046
Target Start/End: Original strand, 13302240 - 13302295
Alignment:
Q  991 ctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaatt 1046  Q
    ||||||||||||||||| ||||| |||||||||||||| | ||||| |||||||||    
T  13302240 ctaaggtaagggtgagattatctttcaataatcataatatgtaatttctgaaaatt 13302295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 991 - 1046
Target Start/End: Original strand, 13323787 - 13323842
Alignment:
Q  991 ctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaatt 1046  Q
    ||||||||||||||||| ||||| |||||||||||||| | ||||| |||||||||    
T  13323787 ctaaggtaagggtgagattatctttcaataatcataatatgtaatttctgaaaatt 13323842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 854 - 925
Target Start/End: Original strand, 55498962 - 55499030
Alignment:
Q  854 agttagaaaaagaaagaaaaacagtcaaaacgttttttacgtaagaacattaagcttttgggagaaaaggga 925  Q
    |||||||||||||||| |||||||||| |||| |||||||||||||| | | ||||||||||||||||||||    
T  55498962 agttagaaaaagaaag-aaaacagtcagaacg-tttttacgtaagaaaact-agcttttgggagaaaaggga 55499030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 991 - 1046
Target Start/End: Original strand, 12033444 - 12033499
Alignment:
Q  991 ctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaatt 1046  Q
    |||||||||||||| || ||||| |||||| ||||||| ||||||| |||||||||    
T  12033444 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 12033499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 991 - 1046
Target Start/End: Original strand, 13312896 - 13312951
Alignment:
Q  991 ctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaatt 1046  Q
    ||||||||||||||||| ||||| |||||||||||||| | |||||  ||||||||    
T  13312896 ctaaggtaagggtgagattatctttcaataatcataatatgtaatttttgaaaatt 13312951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 991 - 1046
Target Start/End: Complemental strand, 17131787 - 17131732
Alignment:
Q  991 ctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaatt 1046  Q
    |||||||||||||| || ||||| |||||| ||||||| ||||||| |||||||||    
T  17131787 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 17131732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 991 - 1026
Target Start/End: Original strand, 23392819 - 23392854
Alignment:
Q  991 ctaaggtaagggtgagactatctctcaataatcata 1026  Q
    |||||||||||||||||||| |||||||||||||||    
T  23392819 ctaaggtaagggtgagactaactctcaataatcata 23392854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 991 - 1046
Target Start/End: Complemental strand, 51301644 - 51301589
Alignment:
Q  991 ctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaatt 1046  Q
    ||||||||||||||||| |||||  ||||||||||||| | ||||| |||||||||    
T  51301644 ctaaggtaagggtgagattatcttccaataatcataatatgtaatttctgaaaatt 51301589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 182; Significance: 9e-98; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 182; E-Value: 9e-98
Query Start/End: Original strand, 864 - 1249
Target Start/End: Original strand, 1775 - 2148
Alignment:
Q  864 agaaagaaaaacagtcaaaacgttttttacgtaagaacattaagcttttgggagaaaagggaaaagaagagccagagctagagaggagagcctagaaccg 963  Q
    ||||||||||| ||||| ||||||||  |||||||||  |  |||||||||||||||||||| ||||||||| ||| | ||| || ||||||||||||||    
T  1775 agaaagaaaaatagtcagaacgtttta-acgtaagaaact--agcttttgggagaaaagggagaagaagagcaagaacaagaaag-agagcctagaaccg 1870  T
Q  964 attcttgctgtctaattttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaa-ttgacctagtggcatagt 1062  Q
    || ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| |||||||| | | |||||    
T  1871 atccttgctgtctaattt-ctgcaaaactaaggtaagggtgagactatatctcaataatcataatctataatttctgaaaaattgacctaattgtatagt 1969  T
Q  1063 tttgaaaaattaaaataaattgagggttagggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcctcttataatataatgttcagaa 1162  Q
    |||| |||||      || ||||||||||||||||||||| |||| ||| |  |||||||||||||| |||||||| ||||| |||| ||||||||| ||    
T  1970 tttggaaaat------aatttgagggttagggtttgatgatgattttgatg--gaatgggtaatgattatgttaattctcttgtaatttaatgttcataa 2061  T
Q  1163 tgaaaacttaatctttgttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatg 1249  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||| | ||||||||||| ||||||||||||||||||||| ||||    
T  2062 tgaaaacttaatccttgttgttgctgtgatcataacttgattgaaattgatgagtgattgtatgaattgatgaatttgtgtacgatg 2148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 182; E-Value: 9e-98
Query Start/End: Original strand, 864 - 1249
Target Start/End: Original strand, 8452 - 8825
Alignment:
Q  864 agaaagaaaaacagtcaaaacgttttttacgtaagaacattaagcttttgggagaaaagggaaaagaagagccagagctagagaggagagcctagaaccg 963  Q
    ||||||||||||||||| ||||||||  |||||||||  |  |||||||||||||||||||| ||||||||| ||| | ||| || ||||||||||||||    
T  8452 agaaagaaaaacagtcagaacgtttta-acgtaagaaact--agcttttgggagaaaagggagaagaagagcaagaacaagaaag-agagcctagaaccg 8547  T
Q  964 attcttgctgtctaattttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctg-aaaattgacctagtggcatagt 1062  Q
    || ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| |||||||||||| | | |||||    
T  8548 atccttgctgtctaattt-ctgcaaaactaaggtaagggtgagactatatctcaataatcataatctataatttctgaaaaattgacctaattgtatagt 8646  T
Q  1063 tttgaaaaattaaaataaattgagggttagggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcctcttataatataatgttcagaa 1162  Q
    ||||       ||||||| ||||||||||||||||||||| |||| |||   ||||||||||||||| |||||||| ||||| |||| ||||||||| ||    
T  8647 tttg------gaaaataatttgagggttagggtttgatgatgattatga--tggaatgggtaatgattatgttaattctcttgtaatttaatgttcaaaa 8738  T
Q  1163 tgaaaacttaatctttgttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatg 1249  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||| | || |||||||| ||||||||||||||||||||| ||||    
T  8739 tgaaaacttaatccttgttgttgctgtgatcataacttgattgaaattgataagtgattgtatgaattgatgaatttgtgtacgatg 8825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 161; Significance: 3e-85; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 161; E-Value: 3e-85
Query Start/End: Original strand, 887 - 1249
Target Start/End: Complemental strand, 11502 - 11146
Alignment:
Q  887 tttttacgtaagaacattaagcttttgggagaaaagggaaaagaagagccagagctagagaggagagcctag-aaccgattcttgctgtctaatt-ttct 984  Q
    |||||||||||||| | |||| ||||||||||||||||| ||||||||| ||| | |||||| ||||||||| |||||||| ||||||| ||||  ||||    
T  11502 tttttacgtaagaaaactaagtttttgggagaaaagggagaagaagagcaagaacaagagagaagagcctaggaaccgatt-ttgctgtgtaatccttct 11404  T
Q  985 gcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagttttgaaaaattaaaataaattg 1084  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | || |||||||| |||||       |||||    
T  11403 gcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaat-----agaattg 11309  T
Q  1085 agggttagggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgtt 1184  Q
    |||||||||||||||||| ||||||| || |||||| ||||||||||||||||| || || |||| | ||||||| ||||||| |||||||  |  ||||    
T  11308 agggttagggtttgatgatgattctggag-ggaatgagtaatgatcatgttaattctgttgtaatgtgatgttcaaaatgaaatcttaatccatactgtt 11210  T
Q  1185 gctgtgatcataaattgattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatg 1249  Q
    |||||||||| |||||||||||||| ||| | |||||||||||||||||||| || |||||||||    
T  11209 gctgtgatcacaaattgattgaaaa-tataattgattggatgaattgatgaagttttgtatgatg 11146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 135; Significance: 1e-69; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 135; E-Value: 1e-69
Query Start/End: Original strand, 854 - 1249
Target Start/End: Complemental strand, 18361 - 17973
Alignment:
Q  854 agttagaaaaagaaagaaaaacagtcaaaacgttttttacgtaagaacattaagcttttgggagaaaagggaaaagaagagccagagctagagaggagag 953  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||| | || ||||||||||||||||||| ||||||||| ||  | ||||||||| |    
T  18361 agttagaaaaagaaagaaaaacagtcagaacgttttt-acgtaagaaaacta-gcttttgggagaaaagggagaagaagagcaaggacaagagaggaggg 18264  T
Q  954 cctag-aaccgattcttgctgtctaatt-ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacct 1051  Q
    | ||| |||||||| | | ||| ||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  18263 cttaggaaccgattgt-gttgtgtaatcattctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttttgaaaattgacct 18165  T
Q  1052 agtggcatagttttgaaaaattaaaataaattgagggttagggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcct-cttataata 1150  Q
    | | || ||| |||     |  |||||||||||||||||| ||||| |||| |||||| ||  ||||  ||||||| |||||||||| ||  || ||||     
T  18164 aattgcttagcttt-----aggaaaataaattgagggttaaggtttaatgatgattct-aacgggaaatggtaatggtcatgttaattctgtttgtaatg 18071  T
Q  1151 taatgttcagaatgaaaacttaatctttgttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatg 1249  Q
    | |||| |||||||||||||||| || |||||||||||||||||| ||||||||| |||||  || ||||||||| ||||||||||| | |||||||||    
T  18070 tgatgtccagaatgaaaacttaacctatgttgttgctgtgatcatgaattgattg-aaatttggattgattggataaattgatgaatatttgtatgatg 17973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 132; Significance: 6e-68; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 132; E-Value: 6e-68
Query Start/End: Original strand, 994 - 1237
Target Start/End: Original strand, 14398 - 14635
Alignment:
Q  994 aggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagttttgaaaaattaaaataaattgagggttagg 1093  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||   ||      |||||||||||||||||    
T  14398 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaag-----ataaattgagggttagg 14492  T
Q  1094 gtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtgatc 1193  Q
    ||||||||| |||||||||| | |||||||||||||||||||||| || || |||| | |||||| ||||||||||||||||| || |||||||||||||    
T  14493 gtttgatgatgattctgaagggaaatgggtaatgatcatgttaattctgttgtaatgtgatgttccgaatgaaaacttaatctatgctgttgctgtgatc 14592  T
Q  1194 ataaattgattgaaaattatgagtgattggatgaattgatgaat 1237  Q
    ||||| |||||||||| ||||| ||||||||| |||||||||||    
T  14593 ataaactgattgaaaa-tatgattgattggataaattgatgaat 14635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 131; Significance: 2e-67; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 854 - 1066
Target Start/End: Complemental strand, 31050 - 30838
Alignment:
Q  854 agttagaaaaagaaagaaaaacagtcaaaacgttttttacgtaagaacattaagcttttgggagaaaagggaaaagaagagccagagctagagaggagag 953  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||| | |||||||||||||||||||||| ||||||||| ||| | |||||||||||    
T  31050 agttagaaaaagaaagaaaaacagtcagaacgttttt-acgtaagaaaactaagcttttgggagaaaagggagaagaagagcaagaacaagagaggagag 30952  T
Q  954 cctag-aaccgattcttgctgtctaatt-ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacct 1051  Q
    ||||| || ||||| ||||||| ||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  30951 cctaggaatcgatt-ttgctgtgtaatccttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacct 30853  T
Q  1052 agtggcatagttttg 1066  Q
    | | |||||||||||    
T  30852 aattgcatagttttg 30838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 130; Significance: 1e-66; HSPs: 17)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 130; E-Value: 1e-66
Query Start/End: Original strand, 992 - 1249
Target Start/End: Original strand, 20437024 - 20437274
Alignment:
Q  992 taaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagttttgaaaaattaaaataaattgagggtta 1091  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||   ||      |||||||||||||||    
T  20437024 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaag-----ataaattgagggtta 20437118  T
Q  1092 gggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtga 1191  Q
    ||||||||||| |||||||| | |||||||||| |||||||||||||  | || |||| |||||||||||||||||||||||||| |  ||||| |||||    
T  20437119 gggtttgatgatgattctgagg-ggaatgggtattgatcatgttaattatgttgtaatgtaatgttcagaatgaaaacttaatctatactgttgttgtga 20437217  T
Q  1192 tcataaattgattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatg 1249  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||  | |||||||||    
T  20437218 tcataaattgattg-aaattatgattgattggatgaattgatgaagatttgtatgatg 20437274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 109; E-Value: 3e-54
Query Start/End: Original strand, 917 - 1072
Target Start/End: Complemental strand, 41112165 - 41112010
Alignment:
Q  917 gaaaagggaaaagaagagccagagctagagaggagagcctagaac-cgattcttgctgtctaattttctgcaaaactaaggtaagggtgagactatctct 1015  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||  |||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  41112165 gaaaagggagaagaagagcaagagctagagaggagagcctagaaatcgatccttgctgtctaattttctgcaaaactaaggtaagggtgagactatctct 41112066  T
Q  1016 caataatcataatctataattcctgaaaattgacctagtggcatagttttgaaaaat 1072  Q
    ||||||||||||||||||||| ||| ||||||||||| | | |||||||||||||||    
T  41112065 caataatcataatctataatttctg-aaattgacctaattgaatagttttgaaaaat 41112010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 88; E-Value: 1e-41
Query Start/End: Original strand, 20 - 305
Target Start/End: Complemental strand, 12169662 - 12169375
Alignment:
Q  20 ccaagcacacccccacataaccctctccaacaaaagctcaattagttacattattaatattactccaaatagaaagaatacctccactattaccttcgga 119  Q
    |||| ||||||||||||||||||||||||||||||    |||||||   ||| |||   |||||||||||||| |||||||||||| | |||||||||||    
T  12169662 ccaaacacacccccacataaccctctccaacaaaaatagaattagtagtattgttagagttactccaaatagagagaatacctccattgttaccttcgga 12169563  T
Q  120 aggaagaaacgtccaattacaatcctcccttccccataaattttgacaaaaagaagtcgaaatctcctccatcttcgtctcttgaatagccaaaaaatca 219  Q
    ||| ||||| | ||||| ||||||| ||| ||||||||| || |||||||||  |  || || ||||||||| ||||| ||||||||||||||||| ||     
T  12169562 agggagaaaagcccaatcacaatccacccctccccataacttgtgacaaaaattatccgtaacctcctccattttcgtttcttgaatagccaaaaattcc 12169463  T
Q  220 accttattacttcgcactaaatctttaatgttatt-ttctttgaaaca-cccccaagcctttaatattaaaggttgtaattatcattg 305  Q
    ||||||||  |||||| ||| ||| |||| || ||  |||||||| || ||||||| ||| |||||||||||||||| || |||||||    
T  12169462 accttattgtttcgcattaattctctaattttgttcctctttgaagcaccccccaaacctctaatattaaaggttgtgatgatcattg 12169375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 979 - 1048
Target Start/End: Complemental strand, 32651640 - 32651571
Alignment:
Q  979 ttttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattga 1048  Q
    |||||| | ||| ||||||||||||||||||||||||||||||||||| | ||||||| |||||||||||    
T  32651640 ttttcttctaaattaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattga 32651571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 992 - 1048
Target Start/End: Complemental strand, 18712854 - 18712798
Alignment:
Q  992 taaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattga 1048  Q
    ||||||| ||||||||||||||||||||||||||| | ||||||| |||||||||||    
T  18712854 taaggtatgggtgagactatctctcaataatcatagtatataatttctgaaaattga 18712798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 992 - 1047
Target Start/End: Original strand, 19663517 - 19663572
Alignment:
Q  992 taaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattg 1047  Q
    ||||||||||||||||||||||||| ||||||||| | ||||||| ||||||||||    
T  19663517 taaggtaagggtgagactatctctcgataatcatagtatataatttctgaaaattg 19663572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 992 - 1048
Target Start/End: Complemental strand, 20805376 - 20805320
Alignment:
Q  992 taaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattga 1048  Q
    ||||||||||||||| ||| |||||||| |||||||| ||||||| |||||||||||    
T  20805376 taaggtaagggtgaggctaactctcaatgatcataatatataatttctgaaaattga 20805320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 992 - 1047
Target Start/End: Complemental strand, 11158148 - 11158093
Alignment:
Q  992 taaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattg 1047  Q
    ||||||||||||||||||| |||||||| ||| |||| ||||||| ||||||||||    
T  11158148 taaggtaagggtgagactaactctcaatgatcttaatatataatttctgaaaattg 11158093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 994 - 1048
Target Start/End: Original strand, 10811785 - 10811839
Alignment:
Q  994 aggtaagggtgagactatctctcaataatcataatctataattcctgaaaattga 1048  Q
    ||||||||||||||||||||||||||||| ||| | || |||| |||||||||||    
T  10811785 aggtaagggtgagactatctctcaataataatagtgtagaatttctgaaaattga 10811839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 991 - 1046
Target Start/End: Original strand, 20851132 - 20851187
Alignment:
Q  991 ctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaatt 1046  Q
    |||||||||||||| || ||||| |||||| ||||||| ||||||| |||||||||    
T  20851132 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 20851187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 991 - 1046
Target Start/End: Original strand, 20857759 - 20857814
Alignment:
Q  991 ctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaatt 1046  Q
    |||||||||||||| || ||||| |||||| ||||||| ||||||| |||||||||    
T  20857759 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 20857814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 991 - 1046
Target Start/End: Complemental strand, 21706331 - 21706276
Alignment:
Q  991 ctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaatt 1046  Q
    |||||||||||||| || ||||| |||||| ||||||| ||||||| |||||||||    
T  21706331 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 21706276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 991 - 1046
Target Start/End: Complemental strand, 21710873 - 21710818
Alignment:
Q  991 ctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaatt 1046  Q
    |||||||||||||| || ||||| |||||| ||||||| ||||||| |||||||||    
T  21710873 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 21710818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 992 - 1022
Target Start/End: Complemental strand, 24476380 - 24476350
Alignment:
Q  992 taaggtaagggtgagactatctctcaataat 1022  Q
    |||||||||||||||||||||||||||||||    
T  24476380 taaggtaagggtgagactatctctcaataat 24476350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 992 - 1022
Target Start/End: Original strand, 25091418 - 25091448
Alignment:
Q  992 taaggtaagggtgagactatctctcaataat 1022  Q
    |||||||||||||||||||||||||||||||    
T  25091418 taaggtaagggtgagactatctctcaataat 25091448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 993 - 1026
Target Start/End: Complemental strand, 18271371 - 18271338
Alignment:
Q  993 aaggtaagggtgagactatctctcaataatcata 1026  Q
    |||||||||||||||||| |||||||||||||||    
T  18271371 aaggtaagggtgagactaactctcaataatcata 18271338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 993 - 1026
Target Start/End: Complemental strand, 18276025 - 18275992
Alignment:
Q  993 aaggtaagggtgagactatctctcaataatcata 1026  Q
    |||||||||||||||||| |||||||||||||||    
T  18276025 aaggtaagggtgagactaactctcaataatcata 18275992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553 (Bit Score: 123; Significance: 1e-62; HSPs: 2)
Name: scaffold0553
Description:

Target: scaffold0553; HSP #1
Raw Score: 123; E-Value: 1e-62
Query Start/End: Original strand, 991 - 1249
Target Start/End: Original strand, 10195 - 10446
Alignment:
Q  991 ctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagttttgaaaaattaaaataaattgagggtt 1090  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||   ||      |||||||| |||||    
T  10195 ctaaggtaagggtgggactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaag-----ataaattgtgggtt 10289  T
Q  1091 agggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtg 1190  Q
    |||||||||||| |||||||| | |||||||||| ||||||||||||| || || |||| ||||||| |||||||||||||||||| |  ||||| ||||    
T  10290 agggtttgatgatgattctgagg-ggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactgttgttgtg 10388  T
Q  1191 atcataaattgattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatg 1249  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||||  | |||||||||    
T  10389 atcataaattgattg-aaattatgattgattggatgaattgatgaagatttgtatgatg 10446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553; HSP #2
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 854 - 934
Target Start/End: Original strand, 10046 - 10124
Alignment:
Q  854 agttagaaaaagaaagaaaaacagtcaaaacgttttttacgtaagaacattaagcttttgggagaaaagggaaaagaagag 934  Q
    ||||||||||||||||||||||||||| |||| |||| ||||||||| ||| |||||||||||||||||||| ||| ||||    
T  10046 agttagaaaaagaaagaaaaacagtcataacg-ttttaacgtaagaaaatt-agcttttgggagaaaagggagaaggagag 10124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 123; Significance: 1e-62; HSPs: 2)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 123; E-Value: 1e-62
Query Start/End: Original strand, 991 - 1249
Target Start/End: Original strand, 1525 - 1776
Alignment:
Q  991 ctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagttttgaaaaattaaaataaattgagggtt 1090  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||   ||      |||||||| |||||    
T  1525 ctaaggtaagggtgggactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaag-----ataaattgtgggtt 1619  T
Q  1091 agggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtg 1190  Q
    |||||||||||| |||||||| | |||||||||| ||||||||||||| || || |||| ||||||| |||||||||||||||||| |  ||||| ||||    
T  1620 agggtttgatgatgattctgagg-ggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactgttgttgtg 1718  T
Q  1191 atcataaattgattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatg 1249  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||||  | |||||||||    
T  1719 atcataaattgattg-aaattatgattgattggatgaattgatgaagatttgtatgatg 1776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544; HSP #2
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 854 - 934
Target Start/End: Original strand, 1376 - 1454
Alignment:
Q  854 agttagaaaaagaaagaaaaacagtcaaaacgttttttacgtaagaacattaagcttttgggagaaaagggaaaagaagag 934  Q
    ||||||||||||||||||||||||||| |||| |||| ||||||||| ||| |||||||||||||||||||| ||| ||||    
T  1376 agttagaaaaagaaagaaaaacagtcataacg-ttttaacgtaagaaaatt-agcttttgggagaaaagggagaaggagag 1454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634 (Bit Score: 85; Significance: 7e-40; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 85; E-Value: 7e-40
Query Start/End: Original strand, 1157 - 1249
Target Start/End: Complemental strand, 3558 - 3466
Alignment:
Q  1157 tcagaatgaaaacttaatctttgttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatg 1249  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  3558 tcagaatgaaaacttaatctttgttgttgctgtgatcataaattgattgaaatttatgggtgattggatgaattgatgaatttgtgtatgatg 3466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 80; Significance: 7e-37; HSPs: 2)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 80; E-Value: 7e-37
Query Start/End: Original strand, 1079 - 1249
Target Start/End: Original strand, 3375 - 3544
Alignment:
Q  1079 aaattgagggttagggtttgatgacgattctgaagaggaatgggtaatga-tcatgttaatcctcttataatataatgttcagaatgaaaacttaatctt 1177  Q
    |||||||||||||||||||||||| |||||||| | |||||||||||||| ||||||||||  | || |||| | ||||||||||||||| ||||||||     
T  3375 aaattgagggttagggtttgatgatgattctgagg-ggaatgggtaatgaatcatgttaattttgttgtaatgtgatgttcagaatgaaatcttaatcta 3473  T
Q  1178 tgttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatg 1249  Q
    |  |||||||||||||| |||||||||||||| ||| | |||||||||||||||||||| || |||||||||    
T  3474 tactgttgctgtgatcacaaattgattgaaaa-tataattgattggatgaattgatgaagttttgtatgatg 3544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476; HSP #2
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 854 - 925
Target Start/End: Original strand, 3153 - 3221
Alignment:
Q  854 agttagaaaaagaaagaaaaacagtcaaaacgttttttacgtaagaacattaagcttttgggagaaaaggga 925  Q
    |||||||||||||||| |||||||||| |||| |||||||||||||| | | ||||||||||||||||||||    
T  3153 agttagaaaaagaaag-aaaacagtcataacg-tttttacgtaagaaaact-agcttttgggagaaaaggga 3221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 79; Significance: 3e-36; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 79; E-Value: 3e-36
Query Start/End: Original strand, 1079 - 1249
Target Start/End: Original strand, 3704 - 3872
Alignment:
Q  1079 aaattgagggttagggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcctcttataatataatgttcagaatgaaaacttaatcttt 1178  Q
    |||||||||||||||||||||||| |||||||| | ||| ||||||||||||||||||||  | || |||| | |||||| |||||||| |||||||| |    
T  3704 aaattgagggttagggtttgatgatgattctgaggggga-tgggtaatgatcatgttaattatgttgtaatgtgatgttcggaatgaaatcttaatctat 3802  T
Q  1179 gttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatg 1249  Q
      ||||| ||||||||||||||||||||||| ||| | |||||||||||||||||||| || |||||||||    
T  3803 actgttgttgtgatcataaattgattgaaaa-tataattgattggatgaattgatgaagttttgtatgatg 3872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 854 - 925
Target Start/End: Original strand, 3482 - 3550
Alignment:
Q  854 agttagaaaaagaaagaaaaacagtcaaaacgttttttacgtaagaacattaagcttttgggagaaaaggga 925  Q
    |||||||||||||||| |||||||||| |||| |||||||||||||| | | ||||||||||||||||||||    
T  3482 agttagaaaaagaaag-aaaacagtcataacg-tttttacgtaagaaaact-agcttttgggagaaaaggga 3550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2054 (Bit Score: 72; Significance: 4e-32; HSPs: 1)
Name: scaffold2054
Description:

Target: scaffold2054; HSP #1
Raw Score: 72; E-Value: 4e-32
Query Start/End: Original strand, 862 - 1044
Target Start/End: Complemental strand, 896 - 717
Alignment:
Q  862 aaagaaagaaaaacagtcaaaacgttttttacgtaagaacattaagcttttgggagaaaagggaaaagaagagccagagctagagaggagagcctagaac 961  Q
    ||||||||||||||||||||||   ||||||||||||||  |  |||||| | ||||||||||| |||| |||| ||| | |||| | ||||||||||||    
T  896 aaagaaagaaaaacagtcaaaaacgtttttacgtaagaaact--agctttggagagaaaagggagaagaggagcaagaacaagagggaagagcctagaac 799  T
Q  962 cgattcttgctgtctaattttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaa 1044  Q
    |||| |||||||||| |||| |||||||||||||||||||||| || ||||| ||||| ||| |||| ||||||| |||||||    
T  798 cgatccttgctgtcttattt-ctgcaaaactaaggtaagggtgggattatctttcaatgatcttaatatataatttctgaaaa 717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796 (Bit Score: 64; Significance: 2e-27; HSPs: 2)
Name: scaffold0796
Description:

Target: scaffold0796; HSP #1
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 986 - 1188
Target Start/End: Original strand, 1727 - 1920
Alignment:
Q  986 caaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagttttgaaaaattaaaataaattga 1085  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | | ||||||||| |||||   ||||   |||    
T  1727 caaaactaaggtaagggtgagactatctctcaataatcataatctataattcctg-aaattgacctaattgaatagttttggaaaat---aata---tga 1819  T
Q  1086 gggttagggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttg 1185  Q
      ||||||||||||||| ||||||||   |||||| |||| ||| |||||| |  |||   ||| ||||||| ||||||||| |||||||  || |||||    
T  1820 aagttagggtttgatgatgattctga--tggaatgagtaaggatgatgttagttttctcggaatttaatgttaagaatgaaagcttaatccatgctgttg 1917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796; HSP #2
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 986 - 1188
Target Start/End: Original strand, 5750 - 5943
Alignment:
Q  986 caaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagttttgaaaaattaaaataaattga 1085  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | | ||||||||| |||||   ||||   |||    
T  5750 caaaactaaggtaagggtgagactatctctcaataatcataatctataattcctg-aaattgacctaattgaatagttttggaaaat---aata---tga 5842  T
Q  1086 gggttagggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttg 1185  Q
      ||||||||||||||| ||||||||   |||||| |||| ||| |||||| |  |||   ||| ||||||| ||||||||| |||||||  || |||||    
T  5843 aagttagggtttgatgatgattctga--tggaatgagtaaggatgatgttagttttctcggaatttaatgttaagaatgaaagcttaatccatgctgttg 5940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 61; Significance: 1e-25; HSPs: 4)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 1153 - 1237
Target Start/End: Complemental strand, 889 - 806
Alignment:
Q  1153 atgttcagaatgaaaacttaatctttgttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattgatgaat 1237  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||  ||||||||| |||||||| |||||||||||    
T  889 atgttcagaatgaaaacttaatctgtgttgttgctgtgatcataaattgattg-gaattatgagggattggataaattgatgaat 806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #2
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 1153 - 1237
Target Start/End: Complemental strand, 8034 - 7951
Alignment:
Q  1153 atgttcagaatgaaaacttaatctttgttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattgatgaat 1237  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||  ||||||||| |||||||| |||||||||||    
T  8034 atgttcagaatgaaaacttaatctgtgttgttgctgtgatcataaattgattg-gaattatgagggattggataaattgatgaat 7951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #3
Raw Score: 60; E-Value: 6e-25
Query Start/End: Original strand, 987 - 1062
Target Start/End: Complemental strand, 991 - 916
Alignment:
Q  987 aaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagt 1062  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||| | |||||||    
T  991 aaaactaaggtaagggtgagactatctctcaataatcataatctatagtttctgaaaattgacctaattgcatagt 916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #4
Raw Score: 60; E-Value: 6e-25
Query Start/End: Original strand, 987 - 1062
Target Start/End: Complemental strand, 8136 - 8061
Alignment:
Q  987 aaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagt 1062  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||| | |||||||    
T  8136 aaaactaaggtaagggtgagactatctctcaataatcataatctatagtttctgaaaattgacctaattgcatagt 8061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 57; Significance: 4e-23; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 57; E-Value: 4e-23
Query Start/End: Original strand, 985 - 1065
Target Start/End: Original strand, 45268 - 45347
Alignment:
Q  985 gcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagtttt 1065  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | | ||||||||    
T  45268 gcaaatctaaggtaagggtgagactatctctcaataatcataatctataattcctg-aaattgacctaattgaatagtttt 45347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 56; Significance: 1e-22; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 854 - 999
Target Start/End: Original strand, 2112 - 2256
Alignment:
Q  854 agttagaaaaagaaagaaaaacagtcaaaacgttttttacgtaagaacattaagcttttgggagaaaagggaaaagaagagccagagctagagaggagag 953  Q
    ||||||||||||||||||||||||||| |||| |||| ||||||||| | | |||||||||||||||||||| ||||||||| ||| | ||||||||| |    
T  2112 agttagaaaaagaaagaaaaacagtcagaacg-ttttaacgtaagaaaact-agcttttgggagaaaagggagaagaagagcaagaacaagagaggaggg 2209  T
Q  954 ccta-gaaccgattcttgctgtctaat-tttctgcaaaactaaggtaa 999  Q
    | || |||||||||  |||||| ||||  |||||||||||||||||||    
T  2210 cttaggaaccgatt-gtgctgtgtaatcattctgcaaaactaaggtaa 2256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 55; Significance: 5e-22; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 943 - 1047
Target Start/End: Original strand, 40482 - 40587
Alignment:
Q  943 agagaggagagcctag-aaccgattcttgctgtctaat-tttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctg 1040  Q
    |||||| ||||||||| |||||||| |||||||  ||| |||||||||| |||||||||||||||||||||||||||||||||||| | ||||||| |||    
T  40482 agagagaagagcctaggaaccgatt-ttgctgtgcaatctttctgcaaatctaaggtaagggtgagactatctctcaataatcatagtatataatttctg 40580  T
Q  1041 aaaattg 1047  Q
    |||||||    
T  40581 aaaattg 40587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 51; Significance: 1e-19; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 943 - 1047
Target Start/End: Complemental strand, 135578 - 135473
Alignment:
Q  943 agagaggagagccta-gaaccgattcttgctgtctaat-tttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctg 1040  Q
    |||||| |||||||| ||||||||| |||||||  ||| |||||| ||| |||||||||||||||||||||||||||||||||||| | ||||||| |||    
T  135578 agagagaagagcctaagaaccgatt-ttgctgtgcaatctttctgaaaatctaaggtaagggtgagactatctctcaataatcatagtatataatttctg 135480  T
Q  1041 aaaattg 1047  Q
    |||||||    
T  135479 aaaattg 135473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0643 (Bit Score: 50; Significance: 5e-19; HSPs: 1)
Name: scaffold0643
Description:

Target: scaffold0643; HSP #1
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 854 - 951
Target Start/End: Original strand, 8806 - 8901
Alignment:
Q  854 agttagaaaaagaaagaaaaacagtcaaaacgttttttacgtaagaacattaagcttttgggagaaaagggaaaagaagagccagagctagagaggag 951  Q
    ||||||||||||||||||||||||||| |||| |||| ||||||||| | | |||||||||||||||||||| ||||||||| ||| | |||||||||    
T  8806 agttagaaaaagaaagaaaaacagtcagaacg-ttttaacgtaagaaaact-agcttttgggagaaaagggagaagaagagcaagaacaagagaggag 8901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 49; Significance: 2e-18; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 980 - 1047
Target Start/End: Complemental strand, 17711 - 17643
Alignment:
Q  980 tttctgcaaaa-ctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattg 1047  Q
    ||||||||||| ||||||||||||||||||||||||||||||| |||||| ||||||| ||||||||||    
T  17711 tttctgcaaaatctaaggtaagggtgagactatctctcaataaccataatgtataatttctgaaaattg 17643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 49; Significance: 2e-18; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 943 - 1045
Target Start/End: Original strand, 22543 - 22646
Alignment:
Q  943 agagaggagagcctag-aaccgattcttgctgtctaat-tttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctg 1040  Q
    |||||| ||||||||| |||||||| |||||||  ||| |||||||||| | |||||||||||||||||||||||||||||||||| | ||||||| |||    
T  22543 agagagaagagcctaggaaccgatt-ttgctgtgcaatatttctgcaaatccaaggtaagggtgagactatctctcaataatcatagtatataatttctg 22641  T
Q  1041 aaaat 1045  Q
    |||||    
T  22642 aaaat 22646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 49; Significance: 2e-18; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 992 - 1048
Target Start/End: Original strand, 101928 - 101984
Alignment:
Q  992 taaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattga 1048  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  101928 taaggtaagggtgagactatctctcaataatcatagtatataattcctgaaaattga 101984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 46; Significance: 1e-16; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 979 - 1048
Target Start/End: Complemental strand, 116964 - 116895
Alignment:
Q  979 ttttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattga 1048  Q
    |||||| | ||| ||||||||||||||||||||||||||||||||||| | ||||||| |||||||||||    
T  116964 ttttcttctaaattaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattga 116895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 993 - 1026
Target Start/End: Complemental strand, 60474 - 60441
Alignment:
Q  993 aaggtaagggtgagactatctctcaataatcata 1026  Q
    |||||||||||||||||| |||||||||||||||    
T  60474 aaggtaagggtgagactaactctcaataatcata 60441  T

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Target: scaffold0222 (Bit Score: 45; Significance: 5e-16; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 992 - 1048
Target Start/End: Complemental strand, 16875 - 16819
Alignment:
Q  992 taaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattga 1048  Q
    ||||||||||||||||||||||||||||||||||| | ||||||| |||||||||||    
T  16875 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattga 16819  T

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Target: scaffold1913 (Bit Score: 44; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold1913
Description:

Target: scaffold1913; HSP #1
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 854 - 925
Target Start/End: Complemental strand, 1028 - 959
Alignment:
Q  854 agttagaaaaagaaagaaaaacagtcaaaacgttttttacgtaagaacattaagcttttgggagaaaaggga 925  Q
    ||||||||||||||||||||||||||| |||| |||||||||||||| | | ||||||||||||||||||||    
T  1028 agttagaaaaagaaagaaaaacagtcagaacg-tttttacgtaagaaaact-agcttttgggagaaaaggga 959  T

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Target: scaffold0535 (Bit Score: 44; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0535
Description:

Target: scaffold0535; HSP #1
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 854 - 925
Target Start/End: Original strand, 5062 - 5131
Alignment:
Q  854 agttagaaaaagaaagaaaaacagtcaaaacgttttttacgtaagaacattaagcttttgggagaaaaggga 925  Q
    ||||||||||||||||||||||||||| |||| |||||||||||||| | | ||||||||||||||||||||    
T  5062 agttagaaaaagaaagaaaaacagtcagaacg-tttttacgtaagaaaact-agcttttgggagaaaaggga 5131  T

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Target: scaffold0160 (Bit Score: 44; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 854 - 925
Target Start/End: Complemental strand, 16048 - 15979
Alignment:
Q  854 agttagaaaaagaaagaaaaacagtcaaaacgttttttacgtaagaacattaagcttttgggagaaaaggga 925  Q
    ||||||||||||||||||||||||||| |||| |||||||||||||| | | ||||||||||||||||||||    
T  16048 agttagaaaaagaaagaaaaacagtcagaacg-tttttacgtaagaaaaat-agcttttgggagaaaaggga 15979  T

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Target: scaffold0011 (Bit Score: 42; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 887 - 1006
Target Start/End: Complemental strand, 153442 - 153322
Alignment:
Q  887 tttttacgtaagaacattaagcttttgggagaaaagggaaaagaagagccagagctagagaggagagccta-gaaccgattcttgctgtctaat-tttct 984  Q
    |||||||||||||| | |||||||||||||||||||||| | ||||||| | | | ||||||||||||||| ||||||||| ||||| |  ||| |||||    
T  153442 tttttacgtaagaaaactaagcttttgggagaaaagggagaggaagagcaaaaacaagagaggagagcctaggaaccgatt-ttgctatgcaatctttct 153344  T
Q  985 gcaaaactaaggtaagggtgag 1006  Q
    || |  ||||||||||||||||    
T  153343 gcgattctaaggtaagggtgag 153322  T

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Target: scaffold0461 (Bit Score: 41; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 992 - 1048
Target Start/End: Original strand, 8 - 64
Alignment:
Q  992 taaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattga 1048  Q
    |||||||||||||||||||||||||||||||| ||||  |||||| |||||||||||    
T  8 taaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaattga 64  T

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Target: scaffold0146 (Bit Score: 41; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 992 - 1048
Target Start/End: Complemental strand, 13687 - 13631
Alignment:
Q  992 taaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattga 1048  Q
    |||||||||||||||||||||||||||||||| ||||  |||||| |||||||||||    
T  13687 taaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaattga 13631  T

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Target: scaffold0815 (Bit Score: 40; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0815
Description:

Target: scaffold0815; HSP #1
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 980 - 1043
Target Start/End: Complemental strand, 1516 - 1453
Alignment:
Q  980 tttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaa 1043  Q
    ||||||||||| ||||||||||||||||||| |||||||| ||| |||| ||||||| ||||||    
T  1516 tttctgcaaaattaaggtaagggtgagactaactctcaatgatcttaatgtataatttctgaaa 1453  T

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Target: scaffold0124 (Bit Score: 40; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 992 - 1047
Target Start/End: Original strand, 34276 - 34331
Alignment:
Q  992 taaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattg 1047  Q
    ||||||||||||||||||||||||| ||||||||| | ||||||| ||||||||||    
T  34276 taaggtaagggtgagactatctctcgataatcatagtatataatttctgaaaattg 34331  T

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Target: scaffold0138 (Bit Score: 37; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 992 - 1048
Target Start/End: Complemental strand, 12352 - 12296
Alignment:
Q  992 taaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattga 1048  Q
    ||||||||||||||| ||| |||||||| |||||||| ||||||| |||||||||||    
T  12352 taaggtaagggtgaggctaactctcaatgatcataatatataatttctgaaaattga 12296  T

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Target: scaffold0790 (Bit Score: 36; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0790
Description:

Target: scaffold0790; HSP #1
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 981 - 1020
Target Start/End: Complemental strand, 5519 - 5480
Alignment:
Q  981 ttctgcaaaactaaggtaagggtgagactatctctcaata 1020  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  5519 ttctgcaaaactaaggtaagggtgagactatctttcaata 5480  T

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Target: scaffold0139 (Bit Score: 36; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 992 - 1047
Target Start/End: Original strand, 14997 - 15052
Alignment:
Q  992 taaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattg 1047  Q
    ||||||||||||||||||| |||||||| ||| |||| ||||||| ||||||||||    
T  14997 taaggtaagggtgagactaactctcaatgatcttaatatataatttctgaaaattg 15052  T

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Target: scaffold0001 (Bit Score: 34; Significance: 0.000000002; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 982 - 1063
Target Start/End: Original strand, 493019 - 493099
Alignment:
Q  982 tctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagtt 1063  Q
    |||||||  ||||||||||||||||| ||||| ||||||||| |||| ||||||| ||||||||| | ||| ||| ||||||    
T  493019 tctgcaattctaaggtaagggtgagattatctttcaataatc-taatgtataatttctgaaaattaatctaatggaatagtt 493099  T

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Target: scaffold0317 (Bit Score: 33; Significance: 0.000000007; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 992 - 1048
Target Start/End: Complemental strand, 1441 - 1385
Alignment:
Q  992 taaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattga 1048  Q
    |||||||||||||||||||||| ||||| ||||| || |||||||  ||||||||||    
T  1441 taaggtaagggtgagactatctttcaatgatcatgatatataatttttgaaaattga 1385  T

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Target: scaffold0096 (Bit Score: 33; Significance: 0.000000007; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 988 - 1048
Target Start/End: Original strand, 39503 - 39563
Alignment:
Q  988 aaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattga 1048  Q
    |||| |||||||||||||| ||| |||||||| |||||||| ||||||| | |||||||||    
T  39503 aaacaaaggtaagggtgaggctaactctcaatgatcataatatataatttcagaaaattga 39563  T

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Target: scaffold0039 (Bit Score: 33; Significance: 0.000000007; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 79 - 155
Target Start/End: Complemental strand, 68868 - 68792
Alignment:
Q  79 ttactccaaatagaaagaatacctccactattaccttcggaaggaagaaacgtccaattacaatcctcccttcccca 155  Q
    ||||||||||  || | |||||||| |||||| ||  ||||||||||| ||||||||| ||||||||||| ||||||    
T  68868 ttactccaaagcgataaaatacctcaactatttccaacggaaggaagatacgtccaatcacaatcctcccctcccca 68792  T

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Target: scaffold0348 (Bit Score: 32; Significance: 0.00000003; HSPs: 1)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 991 - 1046
Target Start/End: Complemental strand, 9391 - 9336
Alignment:
Q  991 ctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaatt 1046  Q
    |||||||||||||| || ||||| |||||| ||||||| ||||||| |||||||||    
T  9391 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 9336  T

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Target: scaffold0127 (Bit Score: 32; Significance: 0.00000003; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 991 - 1046
Target Start/End: Complemental strand, 10294 - 10239
Alignment:
Q  991 ctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaatt 1046  Q
    ||||||||||||||||| |||||  ||||||||||||| | ||||| |||||||||    
T  10294 ctaaggtaagggtgagattatcttccaataatcataatatgtaatttctgaaaatt 10239  T

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Target: scaffold1318 (Bit Score: 31; Significance: 0.0000001; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 992 - 1046
Target Start/End: Original strand, 1913 - 1967
Alignment:
Q  992 taaggtaagggtgagactatctctcaataatcataatctataattcctgaaaatt 1046  Q
    ||||||||||||| || ||||| |||||| ||||||| ||||||| |||||||||    
T  1913 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 1967  T

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Target: scaffold0261 (Bit Score: 31; Significance: 0.0000001; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 980 - 1046
Target Start/End: Original strand, 23558 - 23624
Alignment:
Q  980 tttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaatt 1046  Q
    |||||||||  |||||||||||||| || ||||| | ||| |||||||| ||||||| |||||||||    
T  23558 tttctgcaattctaaggtaagggtgggattatctttgaatgatcataatgtataatttctgaaaatt 23624  T

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Target: scaffold0091 (Bit Score: 30; Significance: 0.0000005; HSPs: 1)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 864 - 948
Target Start/End: Complemental strand, 1725 - 1644
Alignment:
Q  864 agaaagaaaaacagtcaaaacgttttttacgtaagaacattaagcttttgggagaaaagggaaaagaagagccagagctagagag 948  Q
    ||||||||||||||||| || |||||  |||||||||  |  |||||||||||||||||||| ||||||||| ||| | ||||||    
T  1725 agaaagaaaaacagtcagaatgtttta-acgtaagaaact--agcttttgggagaaaagggagaagaagagcaagaacaagagag 1644  T

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Target: scaffold0067 (Bit Score: 30; Significance: 0.0000005; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 950 - 1006
Target Start/End: Original strand, 46689 - 46746
Alignment:
Q  950 agagcctagaaccgattcttgctgtctaatt-ttctgcaaaactaaggtaagggtgag 1006  Q
    ||||||||| ||||||| |||||||  | || ||||||||||||||||||||||||||    
T  46689 agagcctaggaccgatttttgctgtgcatttcttctgcaaaactaaggtaagggtgag 46746  T

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