View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20710_low_15 (Length: 225)
Name: NF20710_low_15
Description: NF20710
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20710_low_15 |
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Alignment Details
Target: chr8 (Bit Score: 172; Significance: 1e-92; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 18 - 213
Target Start/End: Complemental strand, 10878192 - 10877997
Alignment:
| Q |
18 |
actaatggccttttttccttaatattaccccaacaaaaattttcactgccaactccaaggcgtcttcttcttttcatttaagcttataggatttcaaagt |
117 |
Q |
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| T |
10878192 |
actaatggccttttttccttaaaattaccccaacaaaaattttcactgccaactccaaggcgtcttcttcttttcatttaagcttataggatttcaaagt |
10878093 |
T |
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| Q |
118 |
atatatatacatatagacaaaatcagttgacaccaggtgtaaatcaatctcaaccattaaatatcaaatatctaatgtctcataacatttcatctc |
213 |
Q |
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| T |
10878092 |
atatatatacatatagacagaatcggttgacaccaggtgtaagtcaatctcaaccattaaatatcaaatatttaatgtctcataacctttcatctc |
10877997 |
T |
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