View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20711_high_16 (Length: 302)
Name: NF20711_high_16
Description: NF20711
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20711_high_16 |
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Alignment Details
Target: chr8 (Bit Score: 237; Significance: 1e-131; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 23 - 274
Target Start/End: Original strand, 32264654 - 32264906
Alignment:
| Q |
23 |
atcatcatttgaaatggaaattgacgatgatagtgatttatctccagtaagaagggaaaagaaagaacgtgtaagttcaaatctactggcgaaccatgag |
122 |
Q |
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| T |
32264654 |
atcatcatttgaaatggaaattgacgatgatagtgatttatctccagtaagaagggaaaagaaagaacgtggaagttcaaatctattggcgaaccatgag |
32264753 |
T |
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| Q |
123 |
gtatgcttcaatatttcacctcctttgtttgtttgtgtctctcttactgatctcatgtgttgatgaccaatataagctattttatctaatttaaaatgtt |
222 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32264754 |
gtatgcttcaatatttcacctcctttgtttgtttgtgtctctcttactgatctcatgtgttgatgaccaatataagctattttatctaatttaaaatgtt |
32264853 |
T |
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| Q |
223 |
tctgatcatatatacatagattcatcttta-tttttcgtttaaccaacttact |
274 |
Q |
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|||||||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
32264854 |
tctgatcatatatacatagattcatctttattttttcgtttaaccaacttact |
32264906 |
T |
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