View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20712_low_30 (Length: 241)
Name: NF20712_low_30
Description: NF20712
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20712_low_30 |
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Alignment Details
Target: chr7 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 5 - 223
Target Start/End: Original strand, 9135838 - 9136056
Alignment:
| Q |
5 |
ttcaaattcaaagatagaaaaatagtgttaataaagggacatgttgggagtgataaaaacttcaaacgacattcgttttaaaatggaggtagtaatcaat |
104 |
Q |
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| T |
9135838 |
ttcaaattcaaagatagaaaaatagtgttaataaagaggcatgttgggagtgataaaaaccttaaacgacgttcgttttaaaatggaggtagtaatcaat |
9135937 |
T |
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| Q |
105 |
gtatctagaaaattgattagaaatagaaaatgctactaagtgtccacaaaacactctttaaggaccataaagatattgttgaatgcaaaaggtacccttt |
204 |
Q |
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| T |
9135938 |
gtatctagaaaattgattagaaataaaaaatgctaccaagtgtccacaaaacactctttaaggaccataaagatattgttgaatgcaaaaggtacccttt |
9136037 |
T |
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| Q |
205 |
tcgttgttgaaggcatgag |
223 |
Q |
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||||||||||||| ||||| |
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| T |
9136038 |
tcgttgttgaagggatgag |
9136056 |
T |
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