View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20718_high_2 (Length: 665)

Name: NF20718_high_2
Description: NF20718
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20718_high_2
NF20718_high_2
[»] chr8 (42 HSPs)
chr8 (106-327)||(41329832-41330053)
chr8 (418-647)||(41329531-41329760)
chr8 (6-67)||(5957914-5957975)
chr8 (6-73)||(1179889-1179956)
chr8 (1-67)||(40423898-40423964)
chr8 (1-106)||(14548001-14548105)
chr8 (1-62)||(20074902-20074963)
chr8 (1-67)||(12831126-12831192)
chr8 (6-67)||(34012251-34012312)
chr8 (6-66)||(9122269-9122329)
chr8 (1-67)||(15197412-15197478)
chr8 (1-66)||(8841388-8841453)
chr8 (14-67)||(30479429-30479482)
chr8 (6-67)||(37038563-37038624)
chr8 (6-67)||(43414536-43414597)
chr8 (1-73)||(4854812-4854884)
chr8 (3-67)||(32032805-32032869)
chr8 (1-48)||(15258903-15258950)
chr8 (1-67)||(504076-504142)
chr8 (1-67)||(10284586-10284652)
chr8 (1-67)||(16056356-16056422)
chr8 (13-67)||(23122552-23122606)
chr8 (1-67)||(24307748-24307814)
chr8 (13-67)||(32707958-32708012)
chr8 (1-66)||(16383456-16383521)
chr8 (6-50)||(10621059-10621103)
chr8 (15-67)||(42710249-42710301)
chr8 (71-106)||(4854929-4854964)
chr8 (6-65)||(40467784-40467843)
chr8 (16-67)||(44507042-44507093)
chr8 (71-105)||(20075000-20075034)
chr8 (1-67)||(34307295-34307361)
chr8 (14-74)||(17443917-17443977)
chr8 (71-107)||(37038477-37038513)
chr8 (71-110)||(9122190-9122229)
chr8 (71-105)||(504187-504221)
chr8 (71-105)||(15048247-15048281)
chr8 (71-113)||(40424009-40424051)
chr8 (13-67)||(42354543-42354597)
chr8 (71-104)||(5957831-5957864)
chr8 (63-107)||(32032723-32032767)
chr8 (71-107)||(44507153-44507189)
[»] chr5 (34 HSPs)
chr5 (1-67)||(36732897-36732963)
chr5 (1-106)||(40145486-40145590)
chr5 (1-67)||(18520839-18520905)
chr5 (6-67)||(33149593-33149654)
chr5 (6-67)||(35785283-35785344)
chr5 (8-69)||(39557470-39557531)
chr5 (1-57)||(20073481-20073537)
chr5 (6-67)||(36875567-36875628)
chr5 (1-69)||(13811731-13811799)
chr5 (7-67)||(35943847-35943907)
chr5 (6-69)||(14831898-14831961)
chr5 (71-109)||(2740270-2740308)
chr5 (1-67)||(15409565-15409631)
chr5 (6-67)||(2740358-2740419)
chr5 (6-65)||(31009072-31009131)
chr5 (1-67)||(2252123-2252189)
chr5 (1-67)||(3921220-3921286)
chr5 (1-67)||(6679777-6679843)
chr5 (7-48)||(2177449-2177490)
chr5 (6-63)||(26720600-26720657)
chr5 (6-63)||(26990349-26990406)
chr5 (1-50)||(28177854-28177903)
chr5 (71-111)||(6679692-6679732)
chr5 (71-113)||(2252234-2252276)
chr5 (66-100)||(10356639-10356673)
chr5 (71-105)||(26720516-26720550)
chr5 (71-105)||(26990265-26990299)
chr5 (71-105)||(28177775-28177809)
chr5 (71-105)||(35785199-35785233)
chr5 (71-105)||(40145407-40145441)
chr5 (71-104)||(36875669-36875702)
chr5 (7-67)||(33825279-33825339)
chr5 (64-108)||(41470475-41470519)
chr5 (1-49)||(42414275-42414323)
[»] chr2 (54 HSPs)
chr2 (1-67)||(19930775-19930841)
chr2 (1-67)||(33436055-33436121)
chr2 (6-67)||(17473104-17473165)
chr2 (1-69)||(13438422-13438490)
chr2 (1-67)||(28863534-28863600)
chr2 (1-66)||(9058559-9058624)
chr2 (5-62)||(33436294-33436351)
chr2 (1-67)||(2997442-2997508)
chr2 (1-67)||(10249337-10249403)
chr2 (7-65)||(17819961-17820019)
chr2 (13-67)||(20700906-20700960)
chr2 (1-67)||(40701557-40701623)
chr2 (6-107)||(28381571-28381671)
chr2 (7-67)||(7465690-7465750)
chr2 (1-69)||(38732433-38732501)
chr2 (7-67)||(44152012-44152072)
chr2 (8-67)||(30915549-30915608)
chr2 (1-67)||(13365432-13365498)
chr2 (1-67)||(32505603-32505669)
chr2 (1-66)||(42257272-42257337)
chr2 (2-62)||(41575218-41575278)
chr2 (16-63)||(3034942-3034989)
chr2 (13-67)||(4060776-4060830)
chr2 (64-109)||(2533120-2533165)
chr2 (1-66)||(36168915-36168980)
chr2 (13-66)||(38273098-38273151)
chr2 (71-111)||(17823778-17823818)
chr2 (71-107)||(33436209-33436245)
chr2 (13-69)||(41758678-41758734)
chr2 (1-44)||(3440058-3440101)
chr2 (71-106)||(9058479-9058514)
chr2 (8-67)||(17823874-17823933)
chr2 (71-106)||(20700814-20700849)
chr2 (71-113)||(28381721-28381764)
chr2 (71-106)||(30915462-30915497)
chr2 (71-106)||(33436166-33436201)
chr2 (71-106)||(38882879-38882914)
chr2 (1-67)||(2533202-2533268)
chr2 (71-109)||(7465801-7465839)
chr2 (8-50)||(26891476-26891518)
chr2 (581-631)||(30329001-30329051)
chr2 (1-67)||(40613857-40613923)
chr2 (71-105)||(40613968-40614002)
chr2 (71-105)||(40701478-40701512)
chr2 (1-67)||(43490200-43490266)
chr2 (64-105)||(13438343-13438384)
chr2 (7-64)||(21301458-21301515)
chr2 (6-67)||(38882766-38882827)
chr2 (1-50)||(45097707-45097756)
chr2 (18-46)||(2329354-2329382)
chr2 (71-107)||(5574554-5574590)
chr2 (71-107)||(28863453-28863489)
chr2 (71-107)||(32505714-32505750)
chr2 (66-106)||(45097796-45097836)
[»] chr6 (28 HSPs)
chr6 (1-106)||(32869757-32869861)
chr6 (1-67)||(17598633-17598699)
chr6 (1-67)||(22880613-22880679)
chr6 (6-67)||(11427702-11427763)
chr6 (1-67)||(31976327-31976393)
chr6 (13-66)||(946467-946520)
chr6 (1-65)||(31110718-31110782)
chr6 (1-67)||(4231627-4231693)
chr6 (13-67)||(29857918-29857972)
chr6 (13-65)||(6209422-6209474)
chr6 (1-69)||(15507977-15508045)
chr6 (71-107)||(22422084-22422120)
chr6 (7-67)||(23128082-23128142)
chr6 (64-107)||(31976246-31976289)
chr6 (1-67)||(15989997-15990063)
chr6 (1-67)||(30341315-30341381)
chr6 (7-69)||(31952983-31953045)
chr6 (14-67)||(31109355-31109408)
chr6 (3-67)||(15832658-15832722)
chr6 (182-214)||(32659867-32659899)
chr6 (71-106)||(6209531-6209566)
chr6 (1-44)||(30870093-30870136)
chr6 (71-106)||(31110825-31110860)
chr6 (7-69)||(9379665-9379727)
chr6 (71-105)||(17598554-17598588)
chr6 (71-105)||(31953096-31953130)
chr6 (69-106)||(12732481-12732518)
chr6 (7-67)||(28536443-28536503)
[»] chr7 (47 HSPs)
chr7 (1-69)||(35468808-35468876)
chr7 (1-67)||(19329921-19329987)
chr7 (1-67)||(32951448-32951514)
chr7 (6-66)||(3784079-3784139)
chr7 (1-65)||(11044257-11044321)
chr7 (1-67)||(4999469-4999535)
chr7 (1-67)||(8080338-8080404)
chr7 (1-67)||(22343440-22343506)
chr7 (1-67)||(32564381-32564447)
chr7 (1-67)||(35137612-35137678)
chr7 (1-67)||(38837296-38837362)
chr7 (6-67)||(31735961-31736022)
chr7 (6-66)||(3694451-3694511)
chr7 (1-48)||(36208252-36208299)
chr7 (8-67)||(40957793-40957852)
chr7 (1-67)||(8238292-8238358)
chr7 (1-55)||(38267119-38267173)
chr7 (56-106)||(38837216-38837266)
chr7 (6-67)||(35522960-35523021)
chr7 (64-113)||(36361972-36362021)
chr7 (71-107)||(3434560-3434596)
chr7 (13-73)||(27744258-27744318)
chr7 (1-64)||(7389468-7389531)
chr7 (13-48)||(10343537-10343572)
chr7 (8-66)||(1766737-1766795)
chr7 (71-113)||(7389381-7389423)
chr7 (64-106)||(11044187-11044229)
chr7 (71-105)||(19329842-19329876)
chr7 (13-67)||(19436142-19436196)
chr7 (1-67)||(26296723-26296789)
chr7 (1-67)||(38044276-38044342)
chr7 (1-67)||(41915820-41915886)
chr7 (7-48)||(18207264-18207305)
chr7 (1-69)||(7727985-7728053)
chr7 (71-106)||(8080449-8080484)
chr7 (71-106)||(19436253-19436288)
chr7 (64-107)||(26296642-26296685)
chr7 (71-106)||(35468921-35468956)
chr7 (64-107)||(36362024-36362067)
chr7 (18-65)||(41423778-41423825)
chr7 (71-105)||(31735884-31735918)
chr7 (1-67)||(40846068-40846134)
chr7 (18-67)||(46033756-46033805)
chr7 (67-107)||(12310904-12310944)
chr7 (1-65)||(21234480-21234544)
chr7 (14-46)||(39255900-39255932)
chr7 (73-105)||(46374870-46374902)
[»] chr3 (45 HSPs)
chr3 (3-67)||(35965737-35965801)
chr3 (1-67)||(53982090-53982156)
chr3 (1-62)||(24699914-24699975)
chr3 (13-66)||(36707384-36707437)
chr3 (1-65)||(8076472-8076536)
chr3 (3-65)||(9563080-9563142)
chr3 (1-67)||(31456768-31456834)
chr3 (1-67)||(33644279-33644345)
chr3 (1-67)||(54868850-54868916)
chr3 (7-67)||(49607499-49607559)
chr3 (1-67)||(11347877-11347943)
chr3 (1-67)||(36331284-36331350)
chr3 (1-67)||(51419315-51419381)
chr3 (71-111)||(24700020-24700060)
chr3 (7-67)||(30801688-30801748)
chr3 (7-67)||(43746424-43746484)
chr3 (64-107)||(8956760-8956803)
chr3 (8-67)||(20764870-20764929)
chr3 (8-67)||(21746143-21746202)
chr3 (1-48)||(26754774-26754821)
chr3 (16-67)||(42823205-42823256)
chr3 (1-48)||(48375680-48375727)
chr3 (8-67)||(52629386-52629445)
chr3 (7-65)||(1758414-1758471)
chr3 (7-69)||(14623792-14623854)
chr3 (71-105)||(14623905-14623939)
chr3 (7-65)||(17470490-17470548)
chr3 (71-108)||(21746249-21746286)
chr3 (1-50)||(41189736-41189785)
chr3 (16-65)||(45058510-45058559)
chr3 (1-50)||(47531944-47531993)
chr3 (71-107)||(35536624-35536660)
chr3 (71-106)||(11095419-11095454)
chr3 (13-67)||(33118805-33118860)
chr3 (71-106)||(49607413-49607448)
chr3 (71-106)||(54868961-54868996)
chr3 (64-106)||(11347981-11348023)
chr3 (71-113)||(17470397-17470439)
chr3 (7-66)||(26141486-26141547)
chr3 (71-105)||(26141598-26141632)
chr3 (13-67)||(39670102-39670156)
chr3 (71-105)||(53982011-53982045)
chr3 (7-48)||(41080792-41080833)
chr3 (7-43)||(25407126-25407162)
chr3 (7-67)||(35536711-35536771)
[»] chr4 (44 HSPs)
chr4 (7-106)||(23608320-23608418)
chr4 (1-67)||(41236426-41236492)
chr4 (6-67)||(6034128-6034189)
chr4 (1-65)||(41823961-41824025)
chr4 (1-65)||(50052385-50052449)
chr4 (7-66)||(29239971-29240030)
chr4 (3-66)||(56300121-56300184)
chr4 (1-67)||(11511417-11511483)
chr4 (1-67)||(17983698-17983764)
chr4 (1-67)||(42044322-42044388)
chr4 (1-67)||(48183004-48183070)
chr4 (8-65)||(480404-480461)
chr4 (1-62)||(29234205-29234266)
chr4 (57-106)||(42044419-42044468)
chr4 (14-66)||(29589696-29589748)
chr4 (7-63)||(47104629-47104685)
chr4 (7-74)||(28480216-28480283)
chr4 (7-74)||(28481091-28481158)
chr4 (7-74)||(28481966-28482033)
chr4 (8-67)||(40574865-40574924)
chr4 (1-67)||(19670671-19670737)
chr4 (1-67)||(50813847-50813913)
chr4 (1-67)||(54473488-54473554)
chr4 (1-67)||(55475270-55475336)
chr4 (14-67)||(18924450-18924503)
chr4 (6-67)||(50526126-50526187)
chr4 (1-65)||(24995064-24995128)
chr4 (71-106)||(50052494-50052529)
chr4 (6-48)||(48647700-48647742)
chr4 (71-112)||(11511528-11511569)
chr4 (14-67)||(29547914-29547967)
chr4 (1-50)||(31910271-31910320)
chr4 (14-66)||(44536702-44536754)
chr4 (64-111)||(8343222-8343269)
chr4 (71-106)||(29239885-29239920)
chr4 (1-48)||(53352540-53352587)
chr4 (71-105)||(6034044-6034078)
chr4 (71-105)||(41236347-41236381)
chr4 (1-67)||(47986287-47986353)
chr4 (71-105)||(50526237-50526271)
chr4 (71-108)||(29234311-29234348)
chr4 (8-45)||(32939639-32939676)
chr4 (14-55)||(55079680-55079721)
chr4 (66-106)||(29548020-29548060)
[»] chr1 (38 HSPs)
chr1 (1-67)||(2581994-2582060)
chr1 (1-67)||(27564690-27564756)
chr1 (1-67)||(41758884-41758950)
chr1 (6-69)||(47452273-47452336)
chr1 (1-67)||(9474831-9474897)
chr1 (1-67)||(32813326-32813392)
chr1 (1-67)||(38632276-38632342)
chr1 (1-67)||(50630537-50630603)
chr1 (6-67)||(37649282-37649343)
chr1 (6-67)||(51898638-51898699)
chr1 (1-67)||(5958955-5959021)
chr1 (1-67)||(48716237-48716303)
chr1 (1-67)||(50590955-50591021)
chr1 (8-107)||(38595240-38595338)
chr1 (6-67)||(49811482-49811543)
chr1 (6-66)||(43216-43276)
chr1 (5-69)||(23597044-23597108)
chr1 (8-67)||(3000405-3000464)
chr1 (14-69)||(37926391-37926446)
chr1 (1-56)||(44548342-44548397)
chr1 (71-105)||(27564801-27564835)
chr1 (1-67)||(45044515-45044581)
chr1 (16-66)||(47748536-47748586)
chr1 (71-109)||(51898749-51898787)
chr1 (1-65)||(8346344-8346409)
chr1 (14-67)||(41608448-41608501)
chr1 (1-69)||(11152331-11152399)
chr1 (7-55)||(44454064-44454112)
chr1 (71-111)||(48716348-48716388)
chr1 (64-108)||(50630455-50630499)
chr1 (71-106)||(2581914-2581949)
chr1 (71-106)||(23597157-23597192)
chr1 (71-106)||(32813246-32813281)
chr1 (71-106)||(38632387-38632422)
chr1 (71-105)||(9474942-9474976)
chr1 (71-105)||(37649198-37649232)
chr1 (68-105)||(3302596-3302633)
chr1 (71-111)||(41608559-41608599)
[»] scaffold1268 (2 HSPs)
scaffold1268 (6-66)||(885-945)
scaffold1268 (71-105)||(995-1029)
[»] scaffold1267 (2 HSPs)
scaffold1267 (6-66)||(885-945)
scaffold1267 (71-105)||(995-1029)
[»] scaffold0321 (1 HSPs)
scaffold0321 (8-67)||(10064-10123)
[»] scaffold0237 (1 HSPs)
scaffold0237 (13-67)||(4120-4174)
[»] scaffold0316 (1 HSPs)
scaffold0316 (18-48)||(17199-17229)
[»] scaffold0110 (1 HSPs)
scaffold0110 (18-67)||(8818-8867)
[»] scaffold0018 (1 HSPs)
scaffold0018 (14-67)||(152590-152643)


Alignment Details
Target: chr8 (Bit Score: 202; Significance: 1e-110; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 106 - 327
Target Start/End: Complemental strand, 41330053 - 41329832
Alignment:
Q  106 taaaaatacatcaacccaatatttttaatcctctggtttttggaagaaatgatttttgtactgtcaaactcaacaagaagtaagtaaaatttaatcaata 205  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| | |||||    
T  41330053 taaaaatacatcaacccaatatttttaatcctctggtttttggaagaaatgatttttgtactgtcaaattcaacaagaagtaagtaaagtttgaccaata 41329954  T
Q  206 attattttaattaagattccaattcaggttcttccatatcatttacccattttttatttattttgagaggatccatattgtataagaaaaagtgttatta 305  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41329953 attattttaattaagattccaattcaggttcttccatatcatttacccattttttatttattttgagaggatccatattgtataagaaaaagtgttatta 41329854  T
Q  306 aatctcttaacaagttcatatc 327  Q
    ||||||||| ||||||||||||    
T  41329853 aatctcttatcaagttcatatc 41329832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 193; E-Value: 1e-104
Query Start/End: Original strand, 418 - 647
Target Start/End: Complemental strand, 41329760 - 41329531
Alignment:
Q  418 gagggaaatgtcacgtgacttcttgttattttcatccggcttttattccgttgtctcttagttaatttagcttattgtccaggctattctttcattttga 517  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41329760 gagggaaatgtcacgtgatttcttgttattttcatccggcttttattccgttgtctcttagttaatttagcttattgtccaggctattctttcattttga 41329661  T
Q  518 acttaatcaaccaaatcagatgtcaaannnnnnnatagagtttattattccatcctaatttgtttctcatacgtccttcactttttccattttacccatg 617  Q
    |||||||||||||||||||||||  ||       ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41329660 acttaatcaaccaaatcagatgttgaatttttttatagaatttattattccatcctaatttgtttctcatacgtccttcactttttccattttacccatg 41329561  T
Q  618 tttgaattatataaccaaacatttttctac 647  Q
    ||||||||||||||||||||||||||||||    
T  41329560 tttgaattatataaccaaacatttttctac 41329531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 6 - 67
Target Start/End: Original strand, 5957914 - 5957975
Alignment:
Q  6 gcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  5957914 gcacaatcacactttctctttcctctcctcttctctcttcctagtgcatgaggtgtacaagg 5957975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 6 - 73
Target Start/End: Complemental strand, 1179956 - 1179889
Alignment:
Q  6 gcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaaggatatat 73  Q
    |||||| |||||||||||||| ||||||||||||||||||||||| |||| |||||||||||||||||    
T  1179956 gcacaagcacactttctcttttctctcctcttctctcttcctaatgcatggggtgtacaaggatatat 1179889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 40423964 - 40423898
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||| |||||| |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  40423964 accccgcacaagcacactttctcttttctctcctcttctctcttcctaatacatgaggtgtacaagg 40423898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 14548001 - 14548105
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaaggatatattgccacctaaggatgtctatgtatcat 100  Q
    |||| |||||| |||||||||||||| ||||||||||||||||||||||| |||| ||||||||||||| || ||  |   |||| ||||||||||||||    
T  14548001 accccgcacaagcacactttctcttttctctcctcttctctcttcctaatgcatggggtgtacaaggatgta-tgggaataaagggtgtctatgtatcat 14548099  T
Q  101 tactct 106  Q
    ||||||    
T  14548100 tactct 14548105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 20074963 - 20074902
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgta 62  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||    
T  20074963 accctgcacaagcacactttctctttcctcttctcttctctcttcctagttcatgaggtgta 20074902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 12831126 - 12831192
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||| |||||| |||||||||||||| ||||||||||||||||||||||| |||| |||||||||||    
T  12831126 accccgcacaagcacactttctcttttctctcctcttctctcttcctaatgcatggggtgtacaagg 12831192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 6 - 67
Target Start/End: Complemental strand, 34012312 - 34012251
Alignment:
Q  6 gcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||||| |||||||||||||| ||||||||||||||||||||||| |||| |||||||||||    
T  34012312 gcacaagcacactttctcttttctctcctcttctctcttcctaatgcatggggtgtacaagg 34012251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 6 - 66
Target Start/End: Original strand, 9122269 - 9122329
Alignment:
Q  6 gcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaag 66  Q
    |||||| |||||||||||||| ||||||||||||||||||||||| |||| ||||||||||    
T  9122269 gcacaagcacactttctcttttctctcctcttctctcttcctaatgcatggggtgtacaag 9122329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 15197412 - 15197478
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||| |||||| |||||||||||||| |||||||||| |||||||| ||| ||||||||||||||||    
T  15197412 accccgcacaagcacactttctcttttctctcctcttttctcttccaaatgcatgaggtgtacaagg 15197478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 8841453 - 8841388
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaag 66  Q
    |||| |||||| ||||||||||||||||||||||||||||| |||||| | |||| ||||||||||    
T  8841453 accccgcacaagcacactttctctttcctctcctcttctcttttcctagtgcatggggtgtacaag 8841388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 67
Target Start/End: Complemental strand, 30479482 - 30479429
Alignment:
Q  14 acactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||||||||||||| ||| |||||||||||||||||| ||||||||||||||||    
T  30479482 acactttctctttcttcttctcttctctcttcctaatacatgaggtgtacaagg 30479429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 67
Target Start/End: Original strand, 37038563 - 37038624
Alignment:
Q  6 gcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||||| |||||||||| ||||||||||||||||||||||||| | |||| |||||||||||    
T  37038563 gcacaagcacactttctatttcctctcctcttctctcttcctagtgcatggggtgtacaagg 37038624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 67
Target Start/End: Complemental strand, 43414597 - 43414536
Alignment:
Q  6 gcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||||| |||||||||||||| |||||||||||||||||||||||  ||| |||||||||||    
T  43414597 gcacaagcacactttctcttttctctcctcttctctcttcctaatgtatggggtgtacaagg 43414536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 4854884 - 4854812
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaaggatatat 73  Q
    ||||||||||| |||||||||||||| ||||||||||||||||| |||||  ||| | ||||||||| |||||    
T  4854884 accctgcacaagcacactttctcttttctctcctcttctctcttactaatgtatgggatgtacaagggtatat 4854812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 32032805 - 32032869
Alignment:
Q  3 cctgcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||||||||  ||||||||||||||  || |||||||||||||||||| ||||||||||||||||    
T  32032805 cctgcacaagtacactttctctttctccttctcttctctcttcctaatacatgaggtgtacaagg 32032869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 15258950 - 15258903
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttccta 48  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||||    
T  15258950 accctgcacaagcacattttctctttcctctcctcttctctcttccta 15258903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 504142 - 504076
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||| |||||| ||||| |||||||| ||||| ||||||||||||||||| |||| |||||||||||    
T  504142 accccgcacaagcacacattctcttttctctcatcttctctcttcctaatgcatggggtgtacaagg 504076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 10284652 - 10284586
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||| |||||| ||||||||||||||||| || ||||||||||||||| | |||| |||||||||||    
T  10284652 accccgcacaagcacactttctctttcctttcatcttctctcttcctagtgcatggggtgtacaagg 10284586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 16056422 - 16056356
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||| ||||||  |||||||||||||| ||| |||||||||||||||||| |||| |||||||||||    
T  16056422 accccgcacaagtacactttctctttcttcttctcttctctcttcctaatacatggggtgtacaagg 16056356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 67
Target Start/End: Complemental strand, 23122606 - 23122552
Alignment:
Q  13 cacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||||||||||||| ||||||| ||||||||||||||| |||| |||||||||||    
T  23122606 cacactttctcttttctctcctgttctctcttcctaatgcatggggtgtacaagg 23122552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 24307814 - 24307748
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||| ||||||  |||||||||||||| ||| |||||||||||||||||| |||| |||||||||||    
T  24307814 accccgcacaagtacactttctctttcttcttctcttctctcttcctaatacatggggtgtacaagg 24307748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 67
Target Start/End: Complemental strand, 32708012 - 32707958
Alignment:
Q  13 cacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    ||||||||||||||| ||| |||||||||||||||||| |||| |||||||||||    
T  32708012 cacactttctctttcttcttctcttctctcttcctaatacatggggtgtacaagg 32707958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 16383456 - 16383521
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaag 66  Q
    |||| ||||||  |||||||||||||| ||| |||||||||||||||||| |||| ||||||||||    
T  16383456 accccgcacaagtacactttctctttcttcttctcttctctcttcctaatacatggggtgtacaag 16383521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 50
Target Start/End: Complemental strand, 10621103 - 10621059
Alignment:
Q  6 gcacaatcacactttctctttcctctcctcttctctcttcctaat 50  Q
    |||||| |||||||||||||| |||||||||||||||||||||||    
T  10621103 gcacaagcacactttctcttttctctcctcttctctcttcctaat 10621059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 42710301 - 42710249
Alignment:
Q  15 cactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||||||||||| |||||||||||||||||||||||  ||| |||||||||||    
T  42710301 cactttctcttttctctcctcttctctcttcctaatgtatggggtgtacaagg 42710249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 71 - 106
Target Start/End: Original strand, 4854929 - 4854964
Alignment:
Q  71 tattgccacctaaggatgtctatgtatcattactct 106  Q
    ||||||||||||||||||||||||||||||||||||    
T  4854929 tattgccacctaaggatgtctatgtatcattactct 4854964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 6 - 65
Target Start/End: Original strand, 40467784 - 40467843
Alignment:
Q  6 gcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaa 65  Q
    |||||| |||||||||||||||||||| ||||||||||||||| |  ||| |||||||||    
T  40467784 gcacaagcacactttctctttcctctcatcttctctcttcctagtctatggggtgtacaa 40467843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 16 - 67
Target Start/End: Complemental strand, 44507093 - 44507042
Alignment:
Q  16 actttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    ||||||||||| ||||| ||||||||||||||||| |||| |||||||||||    
T  44507093 actttctcttttctctcatcttctctcttcctaatgcatggggtgtacaagg 44507042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 71 - 105
Target Start/End: Original strand, 20075000 - 20075034
Alignment:
Q  71 tattgccacctaaggatgtctatgtatcattactc 105  Q
    |||||||||||||||||||||||||||||||||||    
T  20075000 tattgccacctaaggatgtctatgtatcattactc 20075034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 34307295 - 34307361
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||| ||||||  |||||||||||||| ||| ||||||||||||||||||  ||| |||||||||||    
T  34307295 accccgcacaagtacactttctctttcttcttctcttctctcttcctaatatatggggtgtacaagg 34307361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 17443917 - 17443977
Alignment:
Q  14 acactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaaggatatatt 74  Q
    |||||||||||||| ||| |||||||||||||| | | |||||| ||||||||||| ||||    
T  17443917 acactttctctttcatcttctcttctctcttcccagtgcatgagttgtacaaggatgtatt 17443977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 71 - 107
Target Start/End: Complemental strand, 37038513 - 37038477
Alignment:
Q  71 tattgccacctaaggatgtctatgtatcattactcta 107  Q
    ||||||||||||| |||||||||||||||||||||||    
T  37038513 tattgccacctaaagatgtctatgtatcattactcta 37038477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 110
Target Start/End: Complemental strand, 9122229 - 9122190
Alignment:
Q  71 tattgccacctaaggatgtctatgtatcattactctaaaa 110  Q
    ||||||||||||||| |||||||||||||||||| |||||    
T  9122229 tattgccacctaagggtgtctatgtatcattactttaaaa 9122190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 71 - 105
Target Start/End: Original strand, 504187 - 504221
Alignment:
Q  71 tattgccacctaaggatgtctatgtatcattactc 105  Q
    ||||||||||||||| |||||||||||||||||||    
T  504187 tattgccacctaagggtgtctatgtatcattactc 504221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 71 - 105
Target Start/End: Original strand, 15048247 - 15048281
Alignment:
Q  71 tattgccacctaaggatgtctatgtatcattactc 105  Q
    |||||||||||||||||||||||||||||| ||||    
T  15048247 tattgccacctaaggatgtctatgtatcataactc 15048281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 71 - 113
Target Start/End: Original strand, 40424009 - 40424051
Alignment:
Q  71 tattgccacctaaggatgtctatgtatcattactctaaaaata 113  Q
    ||||||||||||||| | ||||||||||||||||| |||||||    
T  40424009 tattgccacctaagggtatctatgtatcattactcaaaaaata 40424051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 13 - 67
Target Start/End: Complemental strand, 42354597 - 42354543
Alignment:
Q  13 cacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    ||||||||||||||| ||| |||||||||||||||| | |||| |||||| ||||    
T  42354597 cacactttctctttcatcttctcttctctcttcctagtgcatggggtgtagaagg 42354543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 104
Target Start/End: Complemental strand, 5957864 - 5957831
Alignment:
Q  71 tattgccacctaaggatgtctatgtatcattact 104  Q
    |||||||||||||| |||||||||||||||||||    
T  5957864 tattgccacctaagaatgtctatgtatcattact 5957831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 63 - 107
Target Start/End: Complemental strand, 32032767 - 32032723
Alignment:
Q  63 caaggatatattgccacctaaggatgtctatgtatcattactcta 107  Q
    ||||||| ||||||||||||||| ||| |||||||||| ||||||    
T  32032767 caaggatgtattgccacctaagggtgtttatgtatcataactcta 32032723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 71 - 107
Target Start/End: Original strand, 44507153 - 44507189
Alignment:
Q  71 tattgccacctaaggatgtctatgtatcattactcta 107  Q
    |||| |||||||||| |||||||||||||||||||||    
T  44507153 tattaccacctaagggtgtctatgtatcattactcta 44507189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 51; Significance: 7e-20; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 36732963 - 36732897
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||| |||||| |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  36732963 accccgcacaagcacactttctcttttctctcctcttctctcttcctaatgcatgaggtgtacaagg 36732897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 40145486 - 40145590
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaaggatatattgccacctaaggatgtctatgtatcat 100  Q
    |||| |||||| |||||||||||||| ||||||||||||||||||||||| || ||||||||||||| |||| ||  |   |||| ||||||||||||||    
T  40145486 accccgcacaagcacactttctcttttctctcctcttctctcttcctaatgcacgaggtgtacaagggtata-tgagaataaagggtgtctatgtatcat 40145584  T
Q  101 tactct 106  Q
    ||||||    
T  40145585 tactct 40145590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 18520905 - 18520839
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||| |||||| ||||||||||||||  |||||||||||||||||||||| ||||||||||||||||    
T  18520905 accccgcacaagcacactttctcttttatctcctcttctctcttcctaatgcatgaggtgtacaagg 18520839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 6 - 67
Target Start/End: Complemental strand, 33149654 - 33149593
Alignment:
Q  6 gcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||||| |||||||||||||| ||||||||||||||||||||||| |||| |||||||||||    
T  33149654 gcacaagcacactttctcttttctctcctcttctctcttcctaatgcatggggtgtacaagg 33149593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 6 - 67
Target Start/End: Original strand, 35785283 - 35785344
Alignment:
Q  6 gcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||| |||| |||||||||||    
T  35785283 gcacaatcacactttctcttttctctcatcttctctcttcctaatgcatggggtgtacaagg 35785344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 39557531 - 39557470
Alignment:
Q  8 acaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaaggat 69  Q
    |||||||||||||||||||  |||||||||||||||||||||| ||||||||||||| ||||    
T  39557531 acaatcacactttctcttttatctcctcttctctcttcctaatacatgaggtgtacatggat 39557470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 20073537 - 20073481
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttcctaattcatgag 57  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||||| ||||||||    
T  20073537 accctgcacaagcacactttctatttcctctcctcttctctcttcctagttcatgag 20073481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 67
Target Start/End: Complemental strand, 36875628 - 36875567
Alignment:
Q  6 gcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||||| ||||||||||||||  |||||||||||||||||||||| |||| |||||||||||    
T  36875628 gcacaagcacactttctcttttttctcctcttctctcttcctaatacatggggtgtacaagg 36875567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 13811731 - 13811799
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaaggat 69  Q
    |||| |||||| |||||||||||||  ||||||||||||||||||||||| |||| | |||||||||||    
T  13811731 accccgcacaagcacactttctcttctctctcctcttctctcttcctaatgcatgggatgtacaaggat 13811799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 7 - 67
Target Start/End: Complemental strand, 35943907 - 35943847
Alignment:
Q  7 cacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    ||||| ||||||||||||||||||||||||| |||||||||| | |||| |||||||||||    
T  35943907 cacaagcacactttctctttcctctcctcttttctcttcctagtgcatggggtgtacaagg 35943847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 69
Target Start/End: Original strand, 14831898 - 14831961
Alignment:
Q  6 gcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaaggat 69  Q
    |||||| |||||||||| |||  |||||||||||||||||||||| |||| |||||||||||||    
T  14831898 gcacaagcacactttcttttttttctcctcttctctcttcctaatgcatggggtgtacaaggat 14831961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 71 - 109
Target Start/End: Complemental strand, 2740308 - 2740270
Alignment:
Q  71 tattgccacctaaggatgtctatgtatcattactctaaa 109  Q
    |||||||||||||||||||||||||||||||||||||||    
T  2740308 tattgccacctaaggatgtctatgtatcattactctaaa 2740270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 15409631 - 15409565
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||| |||||| |||||| ||||||| |||||||||||||||||||||||  ||| |||||||||||    
T  15409631 accccgcacaagcacactctctcttttctctcctcttctctcttcctaatgtatggggtgtacaagg 15409565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 6 - 67
Target Start/End: Original strand, 2740358 - 2740419
Alignment:
Q  6 gcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||||| |||||||||||||| |||||| |||||||||||||||| |||| | |||||||||    
T  2740358 gcacaagcacactttctcttttctctccccttctctcttcctaatgcatgggatgtacaagg 2740419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 6 - 65
Target Start/End: Original strand, 31009072 - 31009131
Alignment:
Q  6 gcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaa 65  Q
    |||||| |||||||||| |||||||| |||||||||||||||| | |||| |||||||||    
T  31009072 gcacaagcacactttctatttcctcttctcttctctcttcctagtgcatggggtgtacaa 31009131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 2252189 - 2252123
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||| ||||||  |||||||||||||| ||| ||||||||||||||||||  ||| |||||||||||    
T  2252189 accccgcacaagtacactttctctttcttcttctcttctctcttcctaatatatggggtgtacaagg 2252123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 3921286 - 3921220
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||| ||||||  |||||||||||||| ||| ||||||||||||||||||  ||| |||||||||||    
T  3921286 accccgcacaagtacactttctctttcttcttctcttctctcttcctaatatatggggtgtacaagg 3921220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 6679777 - 6679843
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||| |||||| |||| ||||||||| |||||||||||||||||||||||  ||  |||||||||||    
T  6679777 accccgcacaaacacattttctcttttctctcctcttctctcttcctaatgtatagggtgtacaagg 6679843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 48
Target Start/End: Original strand, 2177449 - 2177490
Alignment:
Q  7 cacaatcacactttctctttcctctcctcttctctcttccta 48  Q
    ||||| |||| |||||||||||||||||||||||||||||||    
T  2177449 cacaagcacattttctctttcctctcctcttctctcttccta 2177490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 63
Target Start/End: Original strand, 26720600 - 26720657
Alignment:
Q  6 gcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtac 63  Q
    |||||| |||||||||||||| |||| ||||||||||||||||||  ||| |||||||    
T  26720600 gcacaagcacactttctcttttctcttctcttctctcttcctaatgtatggggtgtac 26720657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 63
Target Start/End: Original strand, 26990349 - 26990406
Alignment:
Q  6 gcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtac 63  Q
    |||||| |||||||||||||| |||| ||||||||||||||||||  ||| |||||||    
T  26990349 gcacaagcacactttctcttttctcttctcttctctcttcctaatgtatggggtgtac 26990406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 28177854 - 28177903
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttcctaat 50  Q
    |||| |||||| |||||||||||||| ||||||||||| |||||||||||    
T  28177854 accccgcacaaacacactttctcttttctctcctcttccctcttcctaat 28177903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 71 - 111
Target Start/End: Complemental strand, 6679732 - 6679692
Alignment:
Q  71 tattgccacctaaggatgtctatgtatcattactctaaaaa 111  Q
    ||||||||||||| |||||||||||||||| ||||||||||    
T  6679732 tattgccacctaaagatgtctatgtatcataactctaaaaa 6679692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 71 - 113
Target Start/End: Original strand, 2252234 - 2252276
Alignment:
Q  71 tattgccacctaaggatgtctatgtatcattactctaaaaata 113  Q
    ||||||||||||||||||| |||||||||| |||||| |||||    
T  2252234 tattgccacctaaggatgtttatgtatcataactctataaata 2252276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 66 - 100
Target Start/End: Complemental strand, 10356673 - 10356639
Alignment:
Q  66 ggatatattgccacctaaggatgtctatgtatcat 100  Q
    |||| ||||||||||||||||||||||||||||||    
T  10356673 ggatgtattgccacctaaggatgtctatgtatcat 10356639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 71 - 105
Target Start/End: Complemental strand, 26720550 - 26720516
Alignment:
Q  71 tattgccacctaaggatgtctatgtatcattactc 105  Q
    |||||||||||||||||||||||||||||| ||||    
T  26720550 tattgccacctaaggatgtctatgtatcataactc 26720516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 71 - 105
Target Start/End: Complemental strand, 26990299 - 26990265
Alignment:
Q  71 tattgccacctaaggatgtctatgtatcattactc 105  Q
    |||||||||||||||||||||||||||||| ||||    
T  26990299 tattgccacctaaggatgtctatgtatcataactc 26990265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 71 - 105
Target Start/End: Complemental strand, 28177809 - 28177775
Alignment:
Q  71 tattgccacctaaggatgtctatgtatcattactc 105  Q
    |||||||||||||||||||||||||||||| ||||    
T  28177809 tattgccacctaaggatgtctatgtatcataactc 28177775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 71 - 105
Target Start/End: Complemental strand, 35785233 - 35785199
Alignment:
Q  71 tattgccacctaaggatgtctatgtatcattactc 105  Q
    ||||||||||||||| |||||||||||||||||||    
T  35785233 tattgccacctaagggtgtctatgtatcattactc 35785199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 71 - 105
Target Start/End: Complemental strand, 40145441 - 40145407
Alignment:
Q  71 tattgccacctaaggatgtctatgtatcattactc 105  Q
    ||||||||||||||| |||||||||||||||||||    
T  40145441 tattgccacctaagggtgtctatgtatcattactc 40145407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 104
Target Start/End: Original strand, 36875669 - 36875702
Alignment:
Q  71 tattgccacctaaggatgtctatgtatcattact 104  Q
    ||||||||||||||| ||||||||||||||||||    
T  36875669 tattgccacctaagggtgtctatgtatcattact 36875702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 7 - 67
Target Start/End: Complemental strand, 33825339 - 33825279
Alignment:
Q  7 cacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    ||||| ||||||||||||||  ||| |||||||||||||||| | |||| |||||| ||||    
T  33825339 cacaagcacactttctcttttatcttctcttctctcttcctagtgcatggggtgtagaagg 33825279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 64 - 108
Target Start/End: Original strand, 41470475 - 41470519
Alignment:
Q  64 aaggatatattgccacctaaggatgtctatgtatcattactctaa 108  Q
    |||||| ||||||||||||| | ||||||||||| ||||||||||    
T  41470475 aaggatgtattgccacctaaaggtgtctatgtattattactctaa 41470519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 42414323 - 42414275
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttcctaa 49  Q
    |||| |||||| |||||||| ||||| || |||||||||||||||||||    
T  42414323 accccgcacaagcacactttatcttttctttcctcttctctcttcctaa 42414275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 51; Significance: 7e-20; HSPs: 54)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 19930841 - 19930775
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||| |||||| |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  19930841 accccgcacaaacacactttctcttttctctcctcttctctcttcctaatgcatgaggtgtacaagg 19930775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 33436121 - 33436055
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||| |||||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  33436121 accccgcacaagcacactttctctttcctctcatcttctctcttcctaatgcatgaggtgtacaagg 33436055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 6 - 67
Target Start/End: Original strand, 17473104 - 17473165
Alignment:
Q  6 gcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||||| |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  17473104 gcacaagcacactttctcttttctctcctcttctctcttcctaatgcatgaggtgtacaagg 17473165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 13438422 - 13438490
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaaggat 69  Q
    |||| |||||| |||||||||||||| ||||||||||||||||||||||| |||| |||||||||||||    
T  13438422 accccgcacaagcacactttctcttttctctcctcttctctcttcctaatgcatggggtgtacaaggat 13438490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 28863534 - 28863600
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||| |||||| ||||||||||||||  |||||||||||||||||||||| ||||||||||||||||    
T  28863534 accccgcacaagcacactttctcttttatctcctcttctctcttcctaatgcatgaggtgtacaagg 28863600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 9058559 - 9058624
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaag 66  Q
    |||| |||||| |||||||||||||| ||||||||||||||||||||||| |||| ||||||||||    
T  9058559 accccgcacaagcacactttctcttttctctcctcttctctcttcctaatgcatggggtgtacaag 9058624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 33436294 - 33436351
Alignment:
Q  5 tgcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgta 62  Q
    ||||||| ||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  33436294 tgcacaagcacactttctctttcctatcctcttctctcttcctagttcatgaggtgta 33436351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 2997508 - 2997442
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||| ||||||  |||||||||||||| ||| |||||||||||||||||| ||||||||||||||||    
T  2997508 accccgcacaagtacactttctctttcttcttctcttctctcttcctaatacatgaggtgtacaagg 2997442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 10249403 - 10249337
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||| |||||| |||||||||||||| |||||||||| |||||||||||| |||| |||||||||||    
T  10249403 accccgcacaagcacactttctcttttctctcctcttttctcttcctaatgcatggggtgtacaagg 10249337  T

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Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 7 - 65
Target Start/End: Complemental strand, 17820019 - 17819961
Alignment:
Q  7 cacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaa 65  Q
    ||||| |||| |||||||||| |||||||||||||||||||||| ||||||||||||||    
T  17820019 cacaaacacattttctctttcatctcctcttctctcttcctaatgcatgaggtgtacaa 17819961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 13 - 67
Target Start/End: Original strand, 20700906 - 20700960
Alignment:
Q  13 cacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||||||||||||||||||||||||||||||||||| | |||| |||||||||||    
T  20700906 cacactttctctttcctctcctcttctctcttcctagtgcatggggtgtacaagg 20700960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 40701557 - 40701623
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||| ||||||||||||||||||||| ||||| ||||||||||||||||| |||  |||||||||||    
T  40701557 accccgcacaatcacactttctcttttctctcatcttctctcttcctaatgcatcgggtgtacaagg 40701623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 107
Target Start/End: Complemental strand, 28381671 - 28381571
Alignment:
Q  6 gcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaaggatatattgccacctaaggatgtctatgtatcattactc 105  Q
    |||||| |||||||||||||| ||||| |||||||||||||||||  ||| ||||||||||||| || ||  |   |||| |||||||||||||||||||    
T  28381671 gcacaagcacactttctcttttctctcatcttctctcttcctaatatatggggtgtacaaggatgta-tgggaataaagggtgtctatgtatcattactc 28381573  T
Q  106 ta 107  Q
    ||    
T  28381572 ta 28381571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 7 - 67
Target Start/End: Complemental strand, 7465750 - 7465690
Alignment:
Q  7 cacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    ||||| ||||||||||||||  |||| ||||||||||||||||| ||||||||||||||||    
T  7465750 cacaagcacactttctcttttatctcttcttctctcttcctaatgcatgaggtgtacaagg 7465690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 38732433 - 38732501
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaaggat 69  Q
    |||| ||||||  |||||||||||||| ||| |||||||||||||||||| |||||| |||||||||||    
T  38732433 accccgcacaagtacactttctctttcttcttctcttctctcttcctaatacatgagatgtacaaggat 38732501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 7 - 67
Target Start/End: Original strand, 44152012 - 44152072
Alignment:
Q  7 cacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    ||||| ||||||||||||||| |||||||||||||||||||||| |||||| | |||||||    
T  44152012 cacaagcacactttctctttcatctcctcttctctcttcctaatgcatgagatatacaagg 44152072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 8 - 67
Target Start/End: Original strand, 30915549 - 30915608
Alignment:
Q  8 acaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||| |||||||||||||| ||||| ||||||||||||||||| |||| |||||||||||    
T  30915549 acaagcacactttctcttttctctcatcttctctcttcctaatacatggggtgtacaagg 30915608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 13365432 - 13365498
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||| ||||||  |||||||||||||| ||| |||||||||||||||||| |||| |||||||||||    
T  13365432 accccgcacaagtacactttctctttcttcttctcttctctcttcctaatacatggggtgtacaagg 13365498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 32505669 - 32505603
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||| |||||| |||||||||| ||| |||||||||||||||||| |||| |||| |||||||||||    
T  32505669 accccgcacaagcacactttctattttctctcctcttctctcttcttaatgcatggggtgtacaagg 32505603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 42257272 - 42257337
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaag 66  Q
    |||| |||||| |||||||||||||| |||||||||||| ||||||||||  ||| ||||||||||    
T  42257272 accccgcacaagcacactttctcttttctctcctcttctttcttcctaatgtatggggtgtacaag 42257337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 62
Target Start/End: Original strand, 41575218 - 41575278
Alignment:
Q  2 ccctgcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgta 62  Q
    |||| ||||| ||||||||||||||| |||||||||||||| ||||||| |||||| ||||    
T  41575218 ccctacacaagcacactttctctttcatctcctcttctctcgtcctaatgcatgagatgta 41575278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 3034989 - 3034942
Alignment:
Q  16 actttctctttcctctcctcttctctcttcctaattcatgaggtgtac 63  Q
    |||||||||||| ||| |||||||||||||||||| ||||||||||||    
T  3034989 actttctctttcttcttctcttctctcttcctaatacatgaggtgtac 3034942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 13 - 67
Target Start/End: Original strand, 4060776 - 4060830
Alignment:
Q  13 cacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||||||||| ||| ||||| ||||||||||||||||| |||| |||||||||||    
T  4060776 cacactttcttttttctctcatcttctctcttcctaatgcatggggtgtacaagg 4060830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 109
Target Start/End: Complemental strand, 2533165 - 2533120
Alignment:
Q  64 aaggatatattgccacctaaggatgtctatgtatcattactctaaa 109  Q
    |||||| ||||||||| |||||||||||||||||||| ||||||||    
T  2533165 aaggatgtattgccacttaaggatgtctatgtatcataactctaaa 2533120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 36168915 - 36168980
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaag 66  Q
    |||| |||||| || ||||||||||| ||||||| |||||||||||||||  ||| ||||||||||    
T  36168915 accccgcacaagcatactttctcttttctctcctattctctcttcctaatgtatggggtgtacaag 36168980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 66
Target Start/End: Complemental strand, 38273151 - 38273098
Alignment:
Q  13 cacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaag 66  Q
    |||||||||||||| ||||||| |||||||||||||||  ||| ||||||||||    
T  38273151 cacactttctcttttctctcctattctctcttcctaatgtatggggtgtacaag 38273098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 71 - 111
Target Start/End: Complemental strand, 17823818 - 17823778
Alignment:
Q  71 tattgccacctaaggatgtctatgtatcattactctaaaaa 111  Q
    ||||||||||||||||||| |||||||||||||||| ||||    
T  17823818 tattgccacctaaggatgtatatgtatcattactcttaaaa 17823778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 71 - 107
Target Start/End: Complemental strand, 33436245 - 33436209
Alignment:
Q  71 tattgccacctaaggatgtctatgtatcattactcta 107  Q
    |||||||| ||||||||||||||||||||||||||||    
T  33436245 tattgccatctaaggatgtctatgtatcattactcta 33436209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 41758678 - 41758734
Alignment:
Q  13 cacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaaggat 69  Q
    |||| |||||||||  ||||||||||||||||||||||  ||| |||||||||||||    
T  41758678 cacattttctcttttatctcctcttctctcttcctaatatatggggtgtacaaggat 41758734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 3440058 - 3440101
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctctt 44  Q
    |||| |||||| |||| |||||||||||||||||||||||||||    
T  3440058 accccgcacaagcacattttctctttcctctcctcttctctctt 3440101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 106
Target Start/End: Complemental strand, 9058514 - 9058479
Alignment:
Q  71 tattgccacctaaggatgtctatgtatcattactct 106  Q
    ||||||||||||||| ||||||||||||||||||||    
T  9058514 tattgccacctaagggtgtctatgtatcattactct 9058479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 67
Target Start/End: Original strand, 17823874 - 17823933
Alignment:
Q  8 acaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||| ||||||||||||||| |||| ||||||||||||| |||  ||| |||||||||||    
T  17823874 acaagcacactttctctttcatctcatcttctctcttccaaatatatggggtgtacaagg 17823933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 106
Target Start/End: Complemental strand, 20700849 - 20700814
Alignment:
Q  71 tattgccacctaaggatgtctatgtatcattactct 106  Q
    ||||||||| ||||||||||||||||||||||||||    
T  20700849 tattgccacataaggatgtctatgtatcattactct 20700814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 113
Target Start/End: Original strand, 28381721 - 28381764
Alignment:
Q  71 tattgccacctaaggatgtctatgtatcattactc-taaaaata 113  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||    
T  28381721 tattgccacctaagggtgtctatgtatcattactcataaaaata 28381764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 106
Target Start/End: Complemental strand, 30915497 - 30915462
Alignment:
Q  71 tattgccacctaaggatgtctatgtatcattactct 106  Q
    ||||||||||||||| ||||||||||||||||||||    
T  30915497 tattgccacctaagggtgtctatgtatcattactct 30915462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 106
Target Start/End: Original strand, 33436166 - 33436201
Alignment:
Q  71 tattgccacctaaggatgtctatgtatcattactct 106  Q
    ||||||||||||||| ||||||||||||||||||||    
T  33436166 tattgccacctaagggtgtctatgtatcattactct 33436201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 106
Target Start/End: Original strand, 38882879 - 38882914
Alignment:
Q  71 tattgccacctaaggatgtctatgtatcattactct 106  Q
    ||||||||||||||| ||||||||||||||||||||    
T  38882879 tattgccacctaagggtgtctatgtatcattactct 38882914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 2533202 - 2533268
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||| |||||| |||||||| |||||  |||||||||||||||||| |||  ||| |||||||||||    
T  2533202 accccgcacaagcacactttttcttttatctcctcttctctcttcccaatgtatggggtgtacaagg 2533268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 71 - 109
Target Start/End: Original strand, 7465801 - 7465839
Alignment:
Q  71 tattgccacctaaggatgtctatgtatcattactctaaa 109  Q
    |||||||| |||||| |||||||||||||||||||||||    
T  7465801 tattgccatctaagggtgtctatgtatcattactctaaa 7465839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 8 - 50
Target Start/End: Complemental strand, 26891518 - 26891476
Alignment:
Q  8 acaatcacactttctctttcctctcctcttctctcttcctaat 50  Q
    |||| |||| |||||||||||||| ||||||||||||||||||    
T  26891518 acaagcacattttctctttcctcttctcttctctcttcctaat 26891476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 581 - 631
Target Start/End: Original strand, 30329001 - 30329051
Alignment:
Q  581 ttctcatacgtccttcactttttccattttacccatgtttgaattatataa 631  Q
    ||||| |||||||| || |||||| |||||| |||||||||||||||||||    
T  30329001 ttctcgtacgtcctccattttttcaattttatccatgtttgaattatataa 30329051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 40613923 - 40613857
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||| |||||| |||||||||||||| ||||||| |||| ||||| ||||  ||| |||||||||||    
T  40613923 accccgcacaagcacactttctcttttctctcctattctttcttcataatgtatggggtgtacaagg 40613857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 71 - 105
Target Start/End: Original strand, 40613968 - 40614002
Alignment:
Q  71 tattgccacctaaggatgtctatgtatcattactc 105  Q
    |||||||||||||||||||||||||||||| ||||    
T  40613968 tattgccacctaaggatgtctatgtatcataactc 40614002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 71 - 105
Target Start/End: Complemental strand, 40701512 - 40701478
Alignment:
Q  71 tattgccacctaaggatgtctatgtatcattactc 105  Q
    ||||||||||||||| |||||||||||||||||||    
T  40701512 tattgccacctaagggtgtctatgtatcattactc 40701478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 43490200 - 43490266
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||| ||||||  ||||||| |||||| ||| |||||||||||||||||| |||  |||||||||||    
T  43490200 accccgcacaagtacactttatctttcttcttctcttctctcttcctaatacatagggtgtacaagg 43490266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 105
Target Start/End: Complemental strand, 13438384 - 13438343
Alignment:
Q  64 aaggatatattgccacctaaggatgtctatgtatcattactc 105  Q
    |||||| ||||| ||||||||| |||||||||||||||||||    
T  13438384 aaggatgtattgtcacctaagggtgtctatgtatcattactc 13438343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 21301515 - 21301458
Alignment:
Q  7 cacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtaca 64  Q
    ||||| ||||||||||||||  ||| ||||||| |||||||| | |||||||||||||    
T  21301515 cacaaacacactttctcttttatcttctcttctttcttcctagtgcatgaggtgtaca 21301458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 67
Target Start/End: Complemental strand, 38882827 - 38882766
Alignment:
Q  6 gcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||||| | |||||||||||| ||||  |||| |||||||||||| |||| |||||||||||    
T  38882827 gcacaagcgcactttctcttttctcttatcttatctcttcctaatgcatggggtgtacaagg 38882766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 45097756 - 45097707
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttcctaat 50  Q
    |||| ||||||  |||||||||||||| ||| ||||||||||||||||||    
T  45097756 accccgcacaagtacactttctctttcttcttctcttctctcttcctaat 45097707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 18 - 46
Target Start/End: Original strand, 2329354 - 2329382
Alignment:
Q  18 tttctctttcctctcctcttctctcttcc 46  Q
    |||||||||||||||||||||||||||||    
T  2329354 tttctctttcctctcctcttctctcttcc 2329382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 71 - 107
Target Start/End: Original strand, 5574554 - 5574590
Alignment:
Q  71 tattgccacctaaggatgtctatgtatcattactcta 107  Q
    ||||||||||||||  |||||||||||||||||||||    
T  5574554 tattgccacctaagagtgtctatgtatcattactcta 5574590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 71 - 107
Target Start/End: Complemental strand, 28863489 - 28863453
Alignment:
Q  71 tattgccacctaaggatgtctatgtatcattactcta 107  Q
    ||||||||||||||| |||||||||||||||| ||||    
T  28863489 tattgccacctaagggtgtctatgtatcattattcta 28863453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 71 - 107
Target Start/End: Original strand, 32505714 - 32505750
Alignment:
Q  71 tattgccacctaaggatgtctatgtatcattactcta 107  Q
    ||||| ||||||||| |||||||||||||||||||||    
T  32505714 tattgtcacctaagggtgtctatgtatcattactcta 32505750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 66 - 106
Target Start/End: Original strand, 45097796 - 45097836
Alignment:
Q  66 ggatatattgccacctaaggatgtctatgtatcattactct 106  Q
    |||| ||||||||||||||||||| |||||||||| |||||    
T  45097796 ggatgtattgccacctaaggatgtttatgtatcataactct 45097836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 50; Significance: 3e-19; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 32869757 - 32869861
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaaggatatattgccacctaaggatgtctatgtatcat 100  Q
    |||| |||||| |||||||||||||| ||||||||||||||||||||||| |||| ||||||||||||| || ||  |   |||| ||||||||||||||    
T  32869757 accccgcacaagcacactttctcttttctctcctcttctctcttcctaatgcatggggtgtacaaggatgta-tgggaataaagggtgtctatgtatcat 32869855  T
Q  101 tactct 106  Q
    ||||||    
T  32869856 tactct 32869861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 17598633 - 17598699
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||| |||||| |||||||||||||| ||||||||||||||||||||||| |||| |||||||||||    
T  17598633 accccgcacaagcacactttctcttttctctcctcttctctcttcctaatgcatggggtgtacaagg 17598699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 22880679 - 22880613
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||| |||||| |||||||||||||| ||||||||||||||||||||||| |||| |||||||||||    
T  22880679 accccgcacaagcacactttctcttttctctcctcttctctcttcctaatacatggggtgtacaagg 22880613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 6 - 67
Target Start/End: Original strand, 11427702 - 11427763
Alignment:
Q  6 gcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||||| |||||||||||||| ||||||||||||||||||||||| |||| |||||||||||    
T  11427702 gcacaagcacactttctcttttctctcctcttctctcttcctaatgcatggggtgtacaagg 11427763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 31976327 - 31976393
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||| |||||| |||||||||||||| |||||||||||||||||||||||  ||| |||||||||||    
T  31976327 accccgcacaagcacactttctcttttctctcctcttctctcttcctaatgtatggggtgtacaagg 31976393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 66
Target Start/End: Original strand, 946467 - 946520
Alignment:
Q  13 cacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaag 66  Q
    |||||||||||||| ||||||||||||||||||||||| |||||| ||||||||    
T  946467 cacactttctcttttctctcctcttctctcttcctaatgcatgagatgtacaag 946520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 31110782 - 31110718
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaa 65  Q
    ||||||||||| |||||||||||||| |||| ||||||||||||||||||  ||| |||||||||    
T  31110782 accctgcacaagcacactttctcttttctctactcttctctcttcctaatgtatggggtgtacaa 31110718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 4231627 - 4231693
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||| ||||||  |||||||||||||| ||| |||||||||||||||||| |||| |||||||||||    
T  4231627 accccgcacaagtacactttctctttcttcttctcttctctcttcctaatacatggggtgtacaagg 4231693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 67
Target Start/End: Original strand, 29857918 - 29857972
Alignment:
Q  13 cacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||||||||||||| |||| |||||||||||||||||| |||| |||||||||||    
T  29857918 cacactttctcttttctcttctcttctctcttcctaatgcatggggtgtacaagg 29857972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 6209474 - 6209422
Alignment:
Q  13 cacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaa 65  Q
    |||||||||||||| ||||||||||||||||||||||| |||| | |||||||    
T  6209474 cacactttctcttttctctcctcttctctcttcctaatgcatgggatgtacaa 6209422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 15508045 - 15507977
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaaggat 69  Q
    |||| ||||||  |||||||||||||| ||| ||||||||||||||||||  ||| |||||||||||||    
T  15508045 accccgcacaagtacactttctctttcttcttctcttctctcttcctaatatatggggtgtacaaggat 15507977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 107
Target Start/End: Original strand, 22422084 - 22422120
Alignment:
Q  71 tattgccacctaaggatgtctatgtatcattactcta 107  Q
    |||||||||||||||||||||||||||||||||||||    
T  22422084 tattgccacctaaggatgtctatgtatcattactcta 22422120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 67
Target Start/End: Complemental strand, 23128142 - 23128082
Alignment:
Q  7 cacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    ||||| |||||||||||||| |||||||||| |||||||||||| |||| | |||||||||    
T  23128142 cacaagcacactttctcttttctctcctcttttctcttcctaatgcatgggatgtacaagg 23128082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 64 - 107
Target Start/End: Complemental strand, 31976289 - 31976246
Alignment:
Q  64 aaggatatattgccacctaaggatgtctatgtatcattactcta 107  Q
    |||| |||||||||||||||||||||||||||||||| ||||||    
T  31976289 aagggtatattgccacctaaggatgtctatgtatcataactcta 31976246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 15990063 - 15989997
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||| ||||||  |||||||||||||| ||| ||||||||||||||||||  ||| |||||||||||    
T  15990063 accccgcacaagtacactttctctttcttcttctcttctctcttcctaatatatggggtgtacaagg 15989997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 30341381 - 30341315
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||| ||||||  |||||||||||||| ||| ||||||||||||||||||  ||| |||||||||||    
T  30341381 accccgcacaagtacactttctctttcttcttctcttctctcttcctaatatatggggtgtacaagg 30341315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 7 - 69
Target Start/End: Complemental strand, 31953045 - 31952983
Alignment:
Q  7 cacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaaggat 69  Q
    ||||| ||||||||||||||| ||| |||||||||||||||| | |||| |||||| ||||||    
T  31953045 cacaaacacactttctctttcatcttctcttctctcttcctagtgcatggggtgtagaaggat 31952983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 67
Target Start/End: Complemental strand, 31109408 - 31109355
Alignment:
Q  14 acactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    ||||||||||||| |||||||||| |||||||||||| |||| ||| |||||||    
T  31109408 acactttctcttttctctcctcttttctcttcctaatgcatggggtatacaagg 31109355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 15832658 - 15832722
Alignment:
Q  3 cctgcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||||||||  ||| |||||||||  ||||||||||| |||||||||| |||| |||||||||||    
T  15832658 cctgcacaaatacattttctcttttttctcctcttctatcttcctaatgcatggggtgtacaagg 15832722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 182 - 214
Target Start/End: Original strand, 32659867 - 32659899
Alignment:
Q  182 gaagtaagtaaaatttaatcaataattatttta 214  Q
    |||||||||||||||||||||||||||||||||    
T  32659867 gaagtaagtaaaatttaatcaataattatttta 32659899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 106
Target Start/End: Original strand, 6209531 - 6209566
Alignment:
Q  71 tattgccacctaaggatgtctatgtatcattactct 106  Q
    ||||||||||||||| ||||||||||||||||||||    
T  6209531 tattgccacctaagggtgtctatgtatcattactct 6209566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 30870093 - 30870136
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctctt 44  Q
    |||| |||||| |||| |||||||||||||||||||||||||||    
T  30870093 accccgcacaagcacattttctctttcctctcctcttctctctt 30870136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 106
Target Start/End: Original strand, 31110825 - 31110860
Alignment:
Q  71 tattgccacctaaggatgtctatgtatcattactct 106  Q
    |||||||||||||||||||||||||||||| |||||    
T  31110825 tattgccacctaaggatgtctatgtatcataactct 31110860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 7 - 69
Target Start/End: Complemental strand, 9379727 - 9379665
Alignment:
Q  7 cacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaaggat 69  Q
    ||||| |||| |||||||||| ||| ||||| |||||||||||| ||| |||| |||||||||    
T  9379727 cacaaacacattttctctttcatcttctcttttctcttcctaatgcataaggtatacaaggat 9379665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 71 - 105
Target Start/End: Complemental strand, 17598588 - 17598554
Alignment:
Q  71 tattgccacctaaggatgtctatgtatcattactc 105  Q
    ||||||||||||||| |||||||||||||||||||    
T  17598588 tattgccacctaagggtgtctatgtatcattactc 17598554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 71 - 105
Target Start/End: Original strand, 31953096 - 31953130
Alignment:
Q  71 tattgccacctaaggatgtctatgtatcattactc 105  Q
    ||||||||||||||||||||||| |||||||||||    
T  31953096 tattgccacctaaggatgtctatctatcattactc 31953130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 106
Target Start/End: Complemental strand, 12732518 - 12732481
Alignment:
Q  69 tatattgccacctaaggatgtctatgtatcattactct 106  Q
    ||||||||||| |||| |||||||||||||||||||||    
T  12732518 tatattgccacttaagaatgtctatgtatcattactct 12732481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 7 - 67
Target Start/End: Complemental strand, 28536503 - 28536443
Alignment:
Q  7 cacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    ||||| ||||||||||||||  ||| |||||| ||||||||| | |||| |||||||||||    
T  28536503 cacaagcacactttctcttttatcttctcttccctcttcctactgcatggggtgtacaagg 28536443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 49; Significance: 1e-18; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 35468876 - 35468808
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaaggat 69  Q
    ||||||||||| ||||||||||||||||| |||||||||||||||||| |||||||| |||| ||||||    
T  35468876 accctgcacaaacacactttctctttcctatcctcttctctcttcctagttcatgagatgtataaggat 35468808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 19329921 - 19329987
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||| |||||| |||||||||||||| ||||||||||||||||||||||| |||| |||||||||||    
T  19329921 accccgcacaagcacactttctcttttctctcctcttctctcttcctaatgcatggggtgtacaagg 19329987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 32951514 - 32951448
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||| |||||| |||||||||||||| ||||||||||||||||||||||| |||| |||||||||||    
T  32951514 accccgcacaagcacactttctcttttctctcctcttctctcttcctaatacatggggtgtacaagg 32951448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 6 - 66
Target Start/End: Original strand, 3784079 - 3784139
Alignment:
Q  6 gcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaag 66  Q
    |||||| |||||||||||||| ||||||||||||||||||||||| |||| ||||||||||    
T  3784079 gcacaagcacactttctcttttctctcctcttctctcttcctaatgcatggggtgtacaag 3784139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 11044257 - 11044321
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaa 65  Q
    |||| ||||||  ||||||||||||||||||| ||||||||||||||||| ||||||||||||||    
T  11044257 accccgcacaagtacactttctctttcctctcatcttctctcttcctaatgcatgaggtgtacaa 11044321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 4999535 - 4999469
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||| |||||| ||||||||||||||  |||||||||||||||||||||| |||| |||||||||||    
T  4999535 accccgcacaaacacactttctcttttatctcctcttctctcttcctaatgcatggggtgtacaagg 4999469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 8080404 - 8080338
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||| |||||| |||||||||||||| ||||||||||||||||||||| | |||| |||||||||||    
T  8080404 accccgcacaagcacactttctcttttctctcctcttctctcttcctattgcatggggtgtacaagg 8080338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 22343440 - 22343506
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||| ||||||  |||||||||||||| ||| |||||||||||||||||| ||||||||||||||||    
T  22343440 accccgcacaagtacactttctctttcttcttctcttctctcttcctaatacatgaggtgtacaagg 22343506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 32564447 - 32564381
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||| ||||||  |||||||||||||| ||| |||||||||||||||||| ||||||||||||||||    
T  32564447 accccgcacaaatacactttctctttcttcttctcttctctcttcctaatacatgaggtgtacaagg 32564381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 35137612 - 35137678
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||| |||||| |||||||||||||| ||||||||||||||||||||||| |||| | |||||||||    
T  35137612 accccgcacaaacacactttctcttttctctcctcttctctcttcctaatgcatgggatgtacaagg 35137678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 38837296 - 38837362
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||| |||||| |||||||||||||| ||||||||||||||||||||||| |||| | |||||||||    
T  38837296 accccgcacaagcacactttctcttttctctcctcttctctcttcctaatgcatgggatgtacaagg 38837362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 67
Target Start/End: Original strand, 31735961 - 31736022
Alignment:
Q  6 gcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||||| |||||||||||||| |||||||||||||||||||||||  ||| |||||||||||    
T  31735961 gcacaagcacactttctcttttctctcctcttctctcttcctaatgtatggggtgtacaagg 31736022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 6 - 66
Target Start/End: Original strand, 3694451 - 3694511
Alignment:
Q  6 gcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaag 66  Q
    |||||| |||||||||||||| ||||||||||||||||||| ||| |||| ||||||||||    
T  3694451 gcacaagcacactttctcttttctctcctcttctctcttcccaatgcatggggtgtacaag 3694511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 36208252 - 36208299
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttccta 48  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||||    
T  36208252 accctgcacaagcacattttctctttcctctcctcttctctcttccta 36208299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 8 - 67
Target Start/End: Original strand, 40957793 - 40957852
Alignment:
Q  8 acaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||| |||||||||||||| ||||| ||||||||||||||||| |||| |||||||||||    
T  40957793 acaagcacactttctcttttctctcatcttctctcttcctaatgcatggggtgtacaagg 40957852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 8238292 - 8238358
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||| ||||||  |||||||||||||| ||| |||||||||||||||||| |||| |||||||||||    
T  8238292 accccgcacaagtacactttctctttcttcttctcttctctcttcctaatacatggggtgtacaagg 8238358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 38267119 - 38267173
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttcctaattcatg 55  Q
    |||| |||||| |||||||||||||| ||||||||||||||||||||||| ||||    
T  38267119 accccgcacaagcacactttctcttttctctcctcttctctcttcctaatgcatg 38267173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 56 - 106
Target Start/End: Complemental strand, 38837266 - 38837216
Alignment:
Q  56 aggtgtacaaggatatattgccacctaaggatgtctatgtatcattactct 106  Q
    |||||||||||| | ||||||||||||||| ||||||||||||||||||||    
T  38837266 aggtgtacaagggtgtattgccacctaagggtgtctatgtatcattactct 38837216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 6 - 67
Target Start/End: Original strand, 35522960 - 35523021
Alignment:
Q  6 gcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||||| |||||||||||||| ||||| |||||||||||||||||  ||| |||||||||||    
T  35522960 gcacaagcacactttctcttttctctcttcttctctcttcctaatgtatggggtgtacaagg 35523021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 64 - 113
Target Start/End: Original strand, 36361972 - 36362021
Alignment:
Q  64 aaggatatattgccacctaaggatgtctatgtatcattactctaaaaata 113  Q
    |||||| ||||||||||||||| ||||||||||||||||||||| |||||    
T  36361972 aaggatgtattgccacctaagggtgtctatgtatcattactctataaata 36362021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 107
Target Start/End: Complemental strand, 3434596 - 3434560
Alignment:
Q  71 tattgccacctaaggatgtctatgtatcattactcta 107  Q
    |||||||||||||||||||||||||||||||||||||    
T  3434596 tattgccacctaaggatgtctatgtatcattactcta 3434560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 73
Target Start/End: Complemental strand, 27744318 - 27744258
Alignment:
Q  13 cacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaaggatatat 73  Q
    |||| ||||||| ||||||||||||||||||||||| | |||| | |||||||||||||||    
T  27744318 cacattttctctatcctctcctcttctctcttcctagtgcatgggatgtacaaggatatat 27744258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 7389468 - 7389531
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtaca 64  Q
    |||| |||||| |||||||||||||| |||||||  |||||||||||||| |||| ||||||||    
T  7389468 accccgcacaagcacactttctcttttctctcctactctctcttcctaatacatggggtgtaca 7389531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 13 - 48
Target Start/End: Complemental strand, 10343572 - 10343537
Alignment:
Q  13 cacactttctctttcctctcctcttctctcttccta 48  Q
    ||||||||||||||||||||||||||||||||||||    
T  10343572 cacactttctctttcctctcctcttctctcttccta 10343537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 1766795 - 1766737
Alignment:
Q  8 acaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaag 66  Q
    |||| ||||||||||||||||||||||||||||||||| || |  ||||||| ||||||    
T  1766795 acaagcacactttctctttcctctcctcttctctcttcgtagtatatgaggtatacaag 1766737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 71 - 113
Target Start/End: Complemental strand, 7389423 - 7389381
Alignment:
Q  71 tattgccacctaaggatgtctatgtatcattactctaaaaata 113  Q
    ||||||||||||||| |||||||||||||||||||| ||||||    
T  7389423 tattgccacctaagggtgtctatgtatcattactcttaaaata 7389381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 64 - 106
Target Start/End: Complemental strand, 11044229 - 11044187
Alignment:
Q  64 aaggatatattgccacctaaggatgtctatgtatcattactct 106  Q
    |||||| ||||||||||||||| ||||||||||||||||||||    
T  11044229 aaggatgtattgccacctaagggtgtctatgtatcattactct 11044187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 71 - 105
Target Start/End: Complemental strand, 19329876 - 19329842
Alignment:
Q  71 tattgccacctaaggatgtctatgtatcattactc 105  Q
    |||||||||||||||||||||||||||||||||||    
T  19329876 tattgccacctaaggatgtctatgtatcattactc 19329842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 13 - 67
Target Start/End: Complemental strand, 19436196 - 19436142
Alignment:
Q  13 cacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||||||||||||| |||| ||||| |||||||||||| |||| |||||||||||    
T  19436196 cacactttctcttttctcttctcttttctcttcctaatgcatggggtgtacaagg 19436142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 26296723 - 26296789
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||| |||||| | || ||||||||| |||||||||||||||||| ||||  |||||||||||||||    
T  26296723 accccgcacaagcgcattttctcttttctctcctcttctctcttcttaatgtatgaggtgtacaagg 26296789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 38044276 - 38044342
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||| ||||||  |||||||||||||| ||| ||||| |||||||||||| |||| |||||||||||    
T  38044276 accccgcacaagtacactttctctttcttcttctcttttctcttcctaatacatggggtgtacaagg 38044342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 41915820 - 41915886
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||| ||||||  |||||||||||||| ||| ||||||||||||||||||  ||| |||||||||||    
T  41915820 accccgcacaagtacactttctctttcttcttctcttctctcttcctaatatatggggtgtacaagg 41915886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 48
Target Start/End: Original strand, 18207264 - 18207305
Alignment:
Q  7 cacaatcacactttctctttcctctcctcttctctcttccta 48  Q
    ||||| ||||||||||||||| ||||||||||||||||||||    
T  18207264 cacaagcacactttctctttcatctcctcttctctcttccta 18207305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 7727985 - 7728053
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaaggat 69  Q
    |||| ||||||  ||||||||| |||| ||| ||||||||||||||||||  ||| |||||||||||||    
T  7727985 accccgcacaagtacactttctgtttcttcttctcttctctcttcctaatatatggggtgtacaaggat 7728053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 106
Target Start/End: Original strand, 8080449 - 8080484
Alignment:
Q  71 tattgccacctaaggatgtctatgtatcattactct 106  Q
    ||||||||||||||| ||||||||||||||||||||    
T  8080449 tattgccacctaagggtgtctatgtatcattactct 8080484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 106
Target Start/End: Original strand, 19436253 - 19436288
Alignment:
Q  71 tattgccacctaaggatgtctatgtatcattactct 106  Q
    ||||| ||||||||||||||||||||||||||||||    
T  19436253 tattgtcacctaaggatgtctatgtatcattactct 19436288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 107
Target Start/End: Complemental strand, 26296685 - 26296642
Alignment:
Q  64 aaggatatattgccacctaaggatgtctatgtatcattactcta 107  Q
    |||| ||||||| |||||||||||||||||||||||| ||||||    
T  26296685 aagggtatattgtcacctaaggatgtctatgtatcataactcta 26296642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 106
Target Start/End: Original strand, 35468921 - 35468956
Alignment:
Q  71 tattgccacctaaggatgtctatgtatcattactct 106  Q
    |||||||| |||||||||||||||||||||||||||    
T  35468921 tattgccatctaaggatgtctatgtatcattactct 35468956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 107
Target Start/End: Complemental strand, 36362067 - 36362024
Alignment:
Q  64 aaggatatattgccacctaaggatgtctatgtatcattactcta 107  Q
    |||||| |||| |||||||||| |||||||||||||||||||||    
T  36362067 aaggatgtattaccacctaagggtgtctatgtatcattactcta 36362024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 65
Target Start/End: Original strand, 41423778 - 41423825
Alignment:
Q  18 tttctctttcctctcctcttctctcttcctaattcatgaggtgtacaa 65  Q
    |||||||||| |||||||||||||||||||| | |||| |||||||||    
T  41423778 tttctctttcatctcctcttctctcttcctagtgcatggggtgtacaa 41423825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 71 - 105
Target Start/End: Complemental strand, 31735918 - 31735884
Alignment:
Q  71 tattgccacctaaggatgtctatgtatcattactc 105  Q
    |||||||||||||||||||||||||||||| ||||    
T  31735918 tattgccacctaaggatgtctatgtatcataactc 31735884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 40846134 - 40846068
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||| ||||||  |||||||||||||| ||| |||||||||||||||||   ||||| |||||||||    
T  40846134 accccgcacaaatacactttctctttcttcttctcttctctcttcctaaaagatgagatgtacaagg 40846068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 67
Target Start/End: Complemental strand, 46033805 - 46033756
Alignment:
Q  18 tttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    ||||||||| |||||||||||||| ||||||||  ||| |||||||||||    
T  46033805 tttctcttttctctcctcttctctattcctaatgtatggggtgtacaagg 46033756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 67 - 107
Target Start/End: Complemental strand, 12310944 - 12310904
Alignment:
Q  67 gatatattgccacctaaggatgtctatgtatcattactcta 107  Q
    |||||||| |||||||||| |||||||||||||| ||||||    
T  12310944 gatatatttccacctaagggtgtctatgtatcataactcta 12310904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 21234480 - 21234544
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaa 65  Q
    |||| |||||| |||| |||||||| |||||||| | |||||||||||||  ||| |||||||||    
T  21234480 accccgcacaagcacattttctcttacctctcctttcctctcttcctaatgtatggggtgtacaa 21234544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 39255932 - 39255900
Alignment:
Q  14 acactttctctttcctctcctcttctctcttcc 46  Q
    |||||||||||||| ||||||||||||||||||    
T  39255932 acactttctctttcatctcctcttctctcttcc 39255900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 73 - 105
Target Start/End: Original strand, 46374870 - 46374902
Alignment:
Q  73 ttgccacctaaggatgtctatgtatcattactc 105  Q
    |||||||||||||||||||||||||||| ||||    
T  46374870 ttgccacctaaggatgtctatgtatcataactc 46374902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 49; Significance: 1e-18; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 35965801 - 35965737
Alignment:
Q  3 cctgcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    ||||||||| ||||||||||||||||||||||||| ||| ||| |||||||||||||||||||||    
T  35965801 cctgcacaagcacactttctctttcctctcctcttttcttttcttaattcatgaggtgtacaagg 35965737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 53982090 - 53982156
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||| |||||| |||||||||||||| ||||||||||||||||||||||| |||| |||||||||||    
T  53982090 accccgcacaagcacactttctcttttctctcctcttctctcttcctaatgcatggggtgtacaagg 53982156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 24699975 - 24699914
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgta 62  Q
    |||||| |||| |||||||||||||||||||||||||||||||||||| || ||||||||||    
T  24699975 accctgtacaaacacactttctctttcctctcctcttctctcttcctagtttatgaggtgta 24699914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 13 - 66
Target Start/End: Complemental strand, 36707437 - 36707384
Alignment:
Q  13 cacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaag 66  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  36707437 cacactttctcttttctctcctcttctctcttcctaatgcatgaggtgtacaag 36707384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 8076472 - 8076536
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaa 65  Q
    |||| |||||| |||||||||||||||||||||||||||||||||||| | |||| |||||||||    
T  8076472 accccgcacaagcacactttctctttcctctcctcttctctcttcctagtgcatggggtgtacaa 8076536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 3 - 65
Target Start/End: Original strand, 9563080 - 9563142
Alignment:
Q  3 cctgcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaa 65  Q
    ||||||||| |||||||||||| | ||||||||||||||||||||||| |||||| |||||||    
T  9563080 cctgcacaaacacactttctctcttctctcctcttctctcttcctaatgcatgagttgtacaa 9563142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 31456768 - 31456834
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||| |||||| |||||||||||||| |||||||||| |||||||||||| |||| |||||||||||    
T  31456768 accccgcacaagcacactttctcttttctctcctcttttctcttcctaatgcatggggtgtacaagg 31456834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 33644279 - 33644345
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||| |||||| |||||||||||||| ||||||||||||||||||||||| |||| |||||| ||||    
T  33644279 accccgcacaagcacactttctcttttctctcctcttctctcttcctaatgcatggggtgtataagg 33644345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 54868916 - 54868850
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||| ||||||||||||||||||||| ||||| ||||||||||||||||| |||  |||||||||||    
T  54868916 accccgcacaatcacactttctcttttctctcatcttctctcttcctaatgcatagggtgtacaagg 54868850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 7 - 67
Target Start/End: Original strand, 49607499 - 49607559
Alignment:
Q  7 cacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    ||||| |||||||||||||| |||||||||| |||||||||||| ||||| ||||||||||    
T  49607499 cacaagcacactttctcttttctctcctcttttctcttcctaatgcatgacgtgtacaagg 49607559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 11347943 - 11347877
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||||||| || |||||||||||||| |||||||||||||||||||||||  ||| |||||| ||||    
T  11347943 accctgcataagcacactttctcttttctctcctcttctctcttcctaatgtatggggtgtataagg 11347877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 36331350 - 36331284
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||| ||||||  |||||||||||||| ||| |||||||||||||||||| |||| |||||||||||    
T  36331350 accccgcacaagtacactttctctttcttcttctcttctctcttcctaatacatggggtgtacaagg 36331284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 51419381 - 51419315
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||| |||||| |||||||||||||| ||||||| |||||||||||||||  ||| |||||||||||    
T  51419381 accccgcacaagcacactttctcttttctctcctattctctcttcctaatgtatggggtgtacaagg 51419315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 111
Target Start/End: Original strand, 24700020 - 24700060
Alignment:
Q  71 tattgccacctaaggatgtctatgtatcattactctaaaaa 111  Q
    |||||||| ||||||||||||||||||||||||||||||||    
T  24700020 tattgccaactaaggatgtctatgtatcattactctaaaaa 24700060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 67
Target Start/End: Complemental strand, 30801748 - 30801688
Alignment:
Q  7 cacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    ||||| |||| ||||||||||||||| ||||||||||||||| | |||| |||||||||||    
T  30801748 cacaagcacattttctctttcctctcatcttctctcttcctagtacatggggtgtacaagg 30801688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 67
Target Start/End: Original strand, 43746424 - 43746484
Alignment:
Q  7 cacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    ||||| |||| |||||||||| ||||||||||| |||||||| | ||||||||||||||||    
T  43746424 cacaaacacaatttctctttcatctcctcttctttcttcctagtgcatgaggtgtacaagg 43746484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 64 - 107
Target Start/End: Complemental strand, 8956803 - 8956760
Alignment:
Q  64 aaggatatattgccacctaaggatgtctatgtatcattactcta 107  Q
    |||||| ||||||||| |||||||||||||||||||||||||||    
T  8956803 aaggatgtattgccacataaggatgtctatgtatcattactcta 8956760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 8 - 67
Target Start/End: Complemental strand, 20764929 - 20764870
Alignment:
Q  8 acaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||| |||||||||||||| ||||| |||||||||||||||||  ||| |||||||||||    
T  20764929 acaagcacactttctcttttctctcatcttctctcttcctaatgtatggggtgtacaagg 20764870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 8 - 67
Target Start/End: Complemental strand, 21746202 - 21746143
Alignment:
Q  8 acaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||| ||||||||||||||| |||| ||||||||||||| |||  |||||||||||||||    
T  21746202 acaagcacactttctctttcatctcatcttctctcttccaaatatatgaggtgtacaagg 21746143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 26754774 - 26754821
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttccta 48  Q
    |||| |||||| |||| |||||||||||||||||||||||||||||||    
T  26754774 accccgcacaagcacattttctctttcctctcctcttctctcttccta 26754821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 16 - 67
Target Start/End: Original strand, 42823205 - 42823256
Alignment:
Q  16 actttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||||||||||| | | |||||||||||||||||| ||||||||||||||||    
T  42823205 actttctctttcttattctcttctctcttcctaatacatgaggtgtacaagg 42823256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 48375727 - 48375680
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttccta 48  Q
    |||| |||||| |||| |||||||||||||||||||||||||||||||    
T  48375727 accccgcacaagcacattttctctttcctctcctcttctctcttccta 48375680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 8 - 67
Target Start/End: Original strand, 52629386 - 52629445
Alignment:
Q  8 acaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||| |||||||||||||| ||||| ||||||||||||||||| |||| | |||||||||    
T  52629386 acaagcacactttctcttttctctcatcttctctcttcctaatgcatgggatgtacaagg 52629445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 7 - 65
Target Start/End: Complemental strand, 1758471 - 1758414
Alignment:
Q  7 cacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaa 65  Q
    ||||| |||| |||||||||| |||||||||||||||||||||| |||| |||||||||    
T  1758471 cacaaacacattttctctttcatctcctcttctctcttcctaatgcatg-ggtgtacaa 1758414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 7 - 69
Target Start/End: Complemental strand, 14623854 - 14623792
Alignment:
Q  7 cacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaaggat 69  Q
    ||||| ||||||||||||||| ||| |||||||||||| ||| | ||||||||||| ||||||    
T  14623854 cacaagcacactttctctttcatcttctcttctctctttctagtgcatgaggtgtagaaggat 14623792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 71 - 105
Target Start/End: Original strand, 14623905 - 14623939
Alignment:
Q  71 tattgccacctaaggatgtctatgtatcattactc 105  Q
    |||||||||||||||||||||||||||||||||||    
T  14623905 tattgccacctaaggatgtctatgtatcattactc 14623939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 7 - 65
Target Start/End: Original strand, 17470490 - 17470548
Alignment:
Q  7 cacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaa 65  Q
    ||||| |||||||||||||| ||||| ||||||||||||||||| |||| | |||||||    
T  17470490 cacaagcacactttctcttttctctcatcttctctcttcctaatgcatgggatgtacaa 17470548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 108
Target Start/End: Original strand, 21746249 - 21746286
Alignment:
Q  71 tattgccacctaaggatgtctatgtatcattactctaa 108  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  21746249 tattgccacctaaggatgtatatgtatcattactctaa 21746286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 41189785 - 41189736
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttcctaat 50  Q
    |||| |||||| |||||||||||||| |||||||||||| ||||||||||    
T  41189785 accccgcacaagcacactttctcttttctctcctcttctttcttcctaat 41189736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 45058559 - 45058510
Alignment:
Q  16 actttctctttcctctcctcttctctcttcctaattcatgaggtgtacaa 65  Q
    |||||||||||| ||| |||||||||||||||||| |||| |||||||||    
T  45058559 actttctctttcttcttctcttctctcttcctaatacatggggtgtacaa 45058510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 47531944 - 47531993
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttcctaat 50  Q
    |||| |||||| |||||||||||||| ||||||| |||||||||||||||    
T  47531944 accccgcacaagcacactttctcttttctctcctattctctcttcctaat 47531993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 71 - 107
Target Start/End: Complemental strand, 35536660 - 35536624
Alignment:
Q  71 tattgccacctaaggatgtctatgtatcattactcta 107  Q
    ||||||||| |||||||||||||||||||||||||||    
T  35536660 tattgccacataaggatgtctatgtatcattactcta 35536624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 106
Target Start/End: Original strand, 11095419 - 11095454
Alignment:
Q  71 tattgccacctaaggatgtctatgtatcattactct 106  Q
    ||||||||||||||| ||||||||||||||||||||    
T  11095419 tattgccacctaagggtgtctatgtatcattactct 11095454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 67
Target Start/End: Complemental strand, 33118860 - 33118805
Alignment:
Q  13 cacactttctctttcctctcct-cttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||||||||||||||||||||| ||||||||| |||| | |||| |||||||||||    
T  33118860 cacactttctctttcctctcctccttctctctccctagtgcatggggtgtacaagg 33118805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 106
Target Start/End: Complemental strand, 49607448 - 49607413
Alignment:
Q  71 tattgccacctaaggatgtctatgtatcattactct 106  Q
    ||||||||||||||| ||||||||||||||||||||    
T  49607448 tattgccacctaagggtgtctatgtatcattactct 49607413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 106
Target Start/End: Original strand, 54868961 - 54868996
Alignment:
Q  71 tattgccacctaaggatgtctatgtatcattactct 106  Q
    ||||||||||||||| ||||||||||||||||||||    
T  54868961 tattgccacctaagggtgtctatgtatcattactct 54868996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 64 - 106
Target Start/End: Original strand, 11347981 - 11348023
Alignment:
Q  64 aaggatatattgccacctaaggatgtctatgtatcattactct 106  Q
    |||||| ||||| |||||||||||||||||||||||| |||||    
T  11347981 aaggatgtattgtcacctaaggatgtctatgtatcataactct 11348023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 71 - 113
Target Start/End: Complemental strand, 17470439 - 17470397
Alignment:
Q  71 tattgccacctaaggatgtctatgtatcattactctaaaaata 113  Q
    ||||||||||||| | ||||||||||||||||||||| |||||    
T  17470439 tattgccacctaaaggtgtctatgtatcattactctagaaata 17470397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 7 - 66
Target Start/End: Complemental strand, 26141547 - 26141486
Alignment:
Q  7 cacaatcacactttctctttcctctcctcttc--tctcttcctaattcatgaggtgtacaag 66  Q
    ||||| |||||||||||||| |||||||||||  ||||||||||||  ||| ||||||||||    
T  26141547 cacaagcacactttctcttttctctcctcttctttctcttcctaatgtatggggtgtacaag 26141486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 71 - 105
Target Start/End: Original strand, 26141598 - 26141632
Alignment:
Q  71 tattgccacctaaggatgtctatgtatcattactc 105  Q
    |||||||||||||||||||||||||||||| ||||    
T  26141598 tattgccacctaaggatgtctatgtatcataactc 26141632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 13 - 67
Target Start/End: Original strand, 39670102 - 39670156
Alignment:
Q  13 cacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    ||||||| |||||| |||||||||||||||||| ||||  ||||| |||||||||    
T  39670102 cacacttcctcttttctctcctcttctctcttcttaatgtatgagatgtacaagg 39670156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 71 - 105
Target Start/End: Complemental strand, 53982045 - 53982011
Alignment:
Q  71 tattgccacctaaggatgtctatgtatcattactc 105  Q
    ||||||||||||||| |||||||||||||||||||    
T  53982045 tattgccacctaagggtgtctatgtatcattactc 53982011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 7 - 48
Target Start/End: Original strand, 41080792 - 41080833
Alignment:
Q  7 cacaatcacactttctctttcctctcctcttctctcttccta 48  Q
    ||||| |||| |||||||||| ||||||||||||||||||||    
T  41080792 cacaagcacattttctctttcatctcctcttctctcttccta 41080833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 7 - 43
Target Start/End: Complemental strand, 25407162 - 25407126
Alignment:
Q  7 cacaatcacactttctctttcctctcctcttctctct 43  Q
    ||||| ||||||||||||||| |||||||||||||||    
T  25407162 cacaaacacactttctctttcatctcctcttctctct 25407126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 7 - 67
Target Start/End: Original strand, 35536711 - 35536771
Alignment:
Q  7 cacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    ||||| ||||||| ||||||| ||| |||||||||||||||| | |||| |||||| ||||    
T  35536711 cacaagcacacttcctctttcatcttctcttctctcttcctagtgcatggggtgtagaagg 35536771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 48; Significance: 4e-18; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 7 - 106
Target Start/End: Original strand, 23608320 - 23608418
Alignment:
Q  7 cacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaaggatatattgccacctaaggatgtctatgtatcattactct 106  Q
    ||||| ||||||||||||||  |||||||||||||||||||||| ||||||||||||| |||| || ||  |   |||||||||||||||||||||||||    
T  23608320 cacaagcacactttctcttttatctcctcttctctcttcctaatgcatgaggtgtacagggatgta-tgggaataaaggatgtctatgtatcattactct 23608418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 41236426 - 41236492
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||| |||||| |||||||||||||| ||||||||||||||||||||||| |||| |||||||||||    
T  41236426 accccgcacaagcacactttctcttttctctcctcttctctcttcctaatgcatggggtgtacaagg 41236492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 6 - 67
Target Start/End: Original strand, 6034128 - 6034189
Alignment:
Q  6 gcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||||| |||||||||||||| ||||||||||||||||||||||| |||| |||||||||||    
T  6034128 gcacaagcacactttctcttttctctcctcttctctcttcctaatgcatggggtgtacaagg 6034189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 41823961 - 41824025
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaa 65  Q
    |||| |||||| |||||||||||||| ||||| ||||||||||||||||| ||||||||||||||    
T  41823961 accccgcacaagcacactttctcttttctctcttcttctctcttcctaatgcatgaggtgtacaa 41824025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 50052449 - 50052385
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaa 65  Q
    |||| |||||| |||||||||||||||||||||||||||||||||||| | ||| ||||||||||    
T  50052449 accccgcacaagcacactttctctttcctctcctcttctctcttcctagtgcataaggtgtacaa 50052385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 66
Target Start/End: Original strand, 29239971 - 29240030
Alignment:
Q  7 cacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaag 66  Q
    ||||| |||||||||||||||||||||||||||||||||||| | |||| ||||||||||    
T  29239971 cacaagcacactttctctttcctctcctcttctctcttcctagtgcatggggtgtacaag 29240030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 66
Target Start/End: Complemental strand, 56300184 - 56300121
Alignment:
Q  3 cctgcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaag 66  Q
    ||||||||| |||||||||||||||||||||||||||||||| |||||  ||||| ||||||||    
T  56300184 cctgcacaaacacactttctctttcctctcctcttctctctttctaatgtatgagatgtacaag 56300121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 11511483 - 11511417
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||| |||||| |||||||||||||| |||| ||||||||||||| |||| ||||||||||||||||    
T  11511483 accccgcacaagcacactttctcttttctcttctcttctctcttcttaatgcatgaggtgtacaagg 11511417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 17983764 - 17983698
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||| ||||||  |||||||||||||| ||| |||||||||||||||||| ||||||||||||||||    
T  17983764 accccgcacaagtacactttctctttcttcttctcttctctcttcctaatacatgaggtgtacaagg 17983698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 42044388 - 42044322
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||| |||||| |||||||||||||| ||||||||||||||||||||||| |||| | |||||||||    
T  42044388 accccgcacaagcacactttctcttttctctcctcttctctcttcctaatgcatgggatgtacaagg 42044322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 48183070 - 48183004
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||| |||||| |||||||||||||| |||||||||||||||||| |||| |||| |||||||||||    
T  48183070 accccgcacaagcacactttctcttttctctcctcttctctcttcttaatgcatggggtgtacaagg 48183004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 480461 - 480404
Alignment:
Q  8 acaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaa 65  Q
    |||| |||||||||||||| ||||||||||||||||||||||| |||| |||||||||    
T  480461 acaagcacactttctcttttctctcctcttctctcttcctaatgcatggggtgtacaa 480404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 29234266 - 29234205
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgta 62  Q
    |||| |||||| |||||||||||||| ||||||||||||||||||||||| |||| ||||||    
T  29234266 accccgcacaagcacactttctcttttctctcctcttctctcttcctaatgcatggggtgta 29234205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 57 - 106
Target Start/End: Original strand, 42044419 - 42044468
Alignment:
Q  57 ggtgtacaaggatatattgccacctaaggatgtctatgtatcattactct 106  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  42044419 ggtgtacaaggatgtattgccacctaagggtgtctatgtatcattactct 42044468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 29589748 - 29589696
Alignment:
Q  14 acactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaag 66  Q
    |||||||||||||| ||| |||||||||||||||||| |||||||||||||||    
T  29589748 acactttctctttcttcttctcttctctcttcctaatacatgaggtgtacaag 29589696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 47104629 - 47104685
Alignment:
Q  7 cacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtac 63  Q
    ||||| ||||||||||||||| ||||||||||||||||| |||| ||||||||||||    
T  47104629 cacaaacacactttctctttcatctcctcttctctcttcttaatgcatgaggtgtac 47104685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 7 - 74
Target Start/End: Complemental strand, 28480283 - 28480216
Alignment:
Q  7 cacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaaggatatatt 74  Q
    ||||| ||||||||||| ||| |||||||||||||||||||| | |||||| ||||||||||| ||||    
T  28480283 cacaaacacactttctccttcatctcctcttctctcttcctagtgcatgagttgtacaaggatgtatt 28480216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 7 - 74
Target Start/End: Complemental strand, 28481158 - 28481091
Alignment:
Q  7 cacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaaggatatatt 74  Q
    ||||| ||||||||||| ||| |||||||||||||||||||| | |||||| ||||||||||| ||||    
T  28481158 cacaaacacactttctccttcatctcctcttctctcttcctagtgcatgagttgtacaaggatgtatt 28481091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 7 - 74
Target Start/End: Complemental strand, 28482033 - 28481966
Alignment:
Q  7 cacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaaggatatatt 74  Q
    ||||| ||||||||||| ||| |||||||||||||||||||| | |||||| ||||||||||| ||||    
T  28482033 cacaaacacactttctccttcatctcctcttctctcttcctagtgcatgagttgtacaaggatgtatt 28481966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 8 - 67
Target Start/End: Original strand, 40574865 - 40574924
Alignment:
Q  8 acaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||| |||||||||||||| |||||||||||||||||||||||  ||| |||||||||||    
T  40574865 acaagcacactttctcttttctctcctcttctctcttcctaatatatggggtgtacaagg 40574924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 19670737 - 19670671
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||| ||||||  |||||||||||||| ||| |||||||||||||||||| |||| |||||||||||    
T  19670737 accccgcacaagtacactttctctttcttcttctcttctctcttcctaatacatggggtgtacaagg 19670671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 50813913 - 50813847
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||| ||||||  |||||||||||||| ||| |||||||||||||||||| |||||| |||||||||    
T  50813913 accccgcacaagtacactttctctttcttcttctcttctctcttcctaatacatgagatgtacaagg 50813847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 54473554 - 54473488
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||| |||||| |||||||| ||||| ||||||||||||||||||||||| ||||  ||||||||||    
T  54473554 accccgcacaagcacactttatcttttctctcctcttctctcttcctaatacatggagtgtacaagg 54473488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 55475270 - 55475336
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||||||| ||  |||||||||||||| ||| |||||||||||||||||| |||| |||||||||||    
T  55475270 accctgcataagtacactttctctttcttcttctcttctctcttcctaatacatggggtgtacaagg 55475336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 14 - 67
Target Start/End: Complemental strand, 18924503 - 18924450
Alignment:
Q  14 acactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||||||||||||| ||| |||||||||||||||||| ||||||||||| ||||    
T  18924503 acactttctctttcttcttctcttctctcttcctaatacatgaggtgtaaaagg 18924450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 6 - 67
Target Start/End: Complemental strand, 50526187 - 50526126
Alignment:
Q  6 gcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||||| ||| |||||| ||||||||||||||||||||||||| | |||| |||||||||||    
T  50526187 gcacaagcacgctttctatttcctctcctcttctctcttcctagtgcatggggtgtacaagg 50526126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 24995128 - 24995064
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaa 65  Q
    |||| |||||| |||| ||||||||| |||||||||||||||||| |||| |||| |||||||||    
T  24995128 accccgcacaagcacattttctcttttctctcctcttctctcttcttaatgcatggggtgtacaa 24995064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 71 - 106
Target Start/End: Original strand, 50052494 - 50052529
Alignment:
Q  71 tattgccacctaaggatgtctatgtatcattactct 106  Q
    ||||||||||||||||||||||||||||||||||||    
T  50052494 tattgccacctaaggatgtctatgtatcattactct 50052529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 6 - 48
Target Start/End: Complemental strand, 48647742 - 48647700
Alignment:
Q  6 gcacaatcacactttctctttcctctcctcttctctcttccta 48  Q
    |||||| |||| |||||||||||||||||||||||||||||||    
T  48647742 gcacaagcacaatttctctttcctctcctcttctctcttccta 48647700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 112
Target Start/End: Original strand, 11511528 - 11511569
Alignment:
Q  71 tattgccacctaaggatgtctatgtatcattactctaaaaat 112  Q
    ||||||||||||||| ||||||||||||||||||| ||||||    
T  11511528 tattgccacctaagggtgtctatgtatcattactcaaaaaat 11511569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 67
Target Start/End: Complemental strand, 29547967 - 29547914
Alignment:
Q  14 acactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    ||||||| |||||| ||| |||||||||||||||||| |||| |||||||||||    
T  29547967 acactttttctttcttcttctcttctctcttcctaatacatggggtgtacaagg 29547914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 31910271 - 31910320
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttcctaat 50  Q
    |||| |||||| |||||||||||||| ||||| |||||||||||||||||    
T  31910271 accccgcacaagcacactttctcttttctctcatcttctctcttcctaat 31910320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 44536754 - 44536702
Alignment:
Q  14 acactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaag 66  Q
    |||||||||||||| ||| |||||||||||||||||| |||  ||||||||||    
T  44536754 acactttctctttcttcttctcttctctcttcctaatacatagggtgtacaag 44536702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 111
Target Start/End: Original strand, 8343222 - 8343269
Alignment:
Q  64 aaggatatattgccacctaaggatgtctatgtatcattactctaaaaa 111  Q
    |||||| ||||||||||||||||||| |||||||||| |||| |||||    
T  8343222 aaggatgtattgccacctaaggatgtttatgtatcataactcgaaaaa 8343269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 106
Target Start/End: Complemental strand, 29239920 - 29239885
Alignment:
Q  71 tattgccacctaaggatgtctatgtatcattactct 106  Q
    ||||||||||||||| ||||||||||||||||||||    
T  29239920 tattgccacctaagggtgtctatgtatcattactct 29239885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 53352587 - 53352540
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttccta 48  Q
    |||| |||||| || ||||||||||| |||||||||||||||||||||    
T  53352587 accccgcacaagcatactttctcttttctctcctcttctctcttccta 53352540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 71 - 105
Target Start/End: Complemental strand, 6034078 - 6034044
Alignment:
Q  71 tattgccacctaaggatgtctatgtatcattactc 105  Q
    ||||||||||||||| |||||||||||||||||||    
T  6034078 tattgccacctaagggtgtctatgtatcattactc 6034044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 71 - 105
Target Start/End: Complemental strand, 41236381 - 41236347
Alignment:
Q  71 tattgccacctaaggatgtctatgtatcattactc 105  Q
    ||||||||||||||| |||||||||||||||||||    
T  41236381 tattgccacctaagggtgtctatgtatcattactc 41236347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 47986287 - 47986353
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||| ||||||  |||||||||||||| | | |||||||||||||||||| |||| | |||||||||    
T  47986287 accccgcacaagtacactttctctttcttattctcttctctcttcctaatacatgggatgtacaagg 47986353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 71 - 105
Target Start/End: Original strand, 50526237 - 50526271
Alignment:
Q  71 tattgccacctaaggatgtctatgtatcattactc 105  Q
    ||||||||||||| |||||||||||||||||||||    
T  50526237 tattgccacctaaagatgtctatgtatcattactc 50526271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 108
Target Start/End: Original strand, 29234311 - 29234348
Alignment:
Q  71 tattgccacctaaggatgtctatgtatcattactctaa 108  Q
    |||||||| |||||| ||||||||||||||||||||||    
T  29234311 tattgccatctaagggtgtctatgtatcattactctaa 29234348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 45
Target Start/End: Complemental strand, 32939676 - 32939639
Alignment:
Q  8 acaatcacactttctctttcctctcctcttctctcttc 45  Q
    |||| ||||||||||||||| |||||||||||||||||    
T  32939676 acaaacacactttctctttcatctcctcttctctcttc 32939639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 55
Target Start/End: Complemental strand, 55079721 - 55079680
Alignment:
Q  14 acactttctctttcctctcctcttctctcttcctaattcatg 55  Q
    |||||||||||||| ||| |||||||||||||||||| ||||    
T  55079721 acactttctctttcttcttctcttctctcttcctaatacatg 55079680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 66 - 106
Target Start/End: Original strand, 29548020 - 29548060
Alignment:
Q  66 ggatatattgccacctaaggatgtctatgtatcattactct 106  Q
    |||| ||||||||||||||||||| |||||||||| |||||    
T  29548020 ggatgtattgccacctaaggatgtttatgtatcataactct 29548060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 2e-17; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 2581994 - 2582060
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||| |||||| |||||||||| ||| ||||||||||||||||||||||| ||||||||||||||||    
T  2581994 accccgcacaagcacactttcttttttctctcctcttctctcttcctaatacatgaggtgtacaagg 2582060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 27564756 - 27564690
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||| |||||| |||||||||||||| ||||||||||||||||||||||| |||| |||||||||||    
T  27564756 accccgcacaagcacactttctcttttctctcctcttctctcttcctaatgcatggggtgtacaagg 27564690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 41758884 - 41758950
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||| |||||| |||||||||||||| ||||||||||||||||||||||| |||| |||||||||||    
T  41758884 accccgcacaaacacactttctcttttctctcctcttctctcttcctaatgcatggggtgtacaagg 41758950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 69
Target Start/End: Complemental strand, 47452336 - 47452273
Alignment:
Q  6 gcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaaggat 69  Q
    |||||| |||||||||||||| ||||||||||||||||||||| | |||| |||||||||||||    
T  47452336 gcacaagcacactttctcttttctctcctcttctctcttcctattgcatggggtgtacaaggat 47452273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 9474897 - 9474831
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||| |||||| |||||||||||||| ||||||||||||||||||||||| |||| | |||||||||    
T  9474897 accccgcacaaacacactttctcttttctctcctcttctctcttcctaatgcatgggatgtacaagg 9474831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 32813326 - 32813392
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||| |||||| |||||||||||||| |||||||||||||||||||||||  ||| |||||||||||    
T  32813326 accccgcacaagcacactttctcttttctctcctcttctctcttcctaatgtatggggtgtacaagg 32813392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 38632342 - 38632276
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||| |||||| |||||||| ||||| ||||||||||||||||||||||| |||| |||||||||||    
T  38632342 accccgcacaagcacactttttcttttctctcctcttctctcttcctaatgcatggggtgtacaagg 38632276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 50630537 - 50630603
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||| |||||| |||||||||||||| ||||||||||||||||||||||| |||  |||||||||||    
T  50630537 accccgcacaagcacactttctcttttctctcctcttctctcttcctaatgcatagggtgtacaagg 50630603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 67
Target Start/End: Original strand, 37649282 - 37649343
Alignment:
Q  6 gcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||||| ||||||||| |||| ||||||||||||||||||||||| |||| |||||||||||    
T  37649282 gcacaagcacactttcccttttctctcctcttctctcttcctaatgcatggggtgtacaagg 37649343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 67
Target Start/End: Complemental strand, 51898699 - 51898638
Alignment:
Q  6 gcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||||| |||||||||| ||||||||||||||||||||||||| | |||| |||||||||||    
T  51898699 gcacaagcacactttctatttcctctcctcttctctcttcctagtgcatggggtgtacaagg 51898638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 5959021 - 5958955
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||| ||||||  |||||||||||||| ||| |||||||||||||||||| |||| |||||||||||    
T  5959021 accccgcacaagtacactttctctttcttcttctcttctctcttcctaatacatggggtgtacaagg 5958955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 48716303 - 48716237
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||| |||||| |||||||| ||||| || |||||||||||||||||||| |||| |||||||||||    
T  48716303 accccgcacaagcacactttatcttttctttcctcttctctcttcctaatgcatggggtgtacaagg 48716237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 50591021 - 50590955
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||| ||||||  |||||||||||||| ||| |||||||||||||||||| |||| |||||||||||    
T  50591021 accccgcacaagtacactttctctttcttcttctcttctctcttcctaatacatggggtgtacaagg 50590955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 8 - 107
Target Start/End: Original strand, 38595240 - 38595338
Alignment:
Q  8 acaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaaggatatattgccacctaa-ggatgtctatgtatcattactct 106  Q
    |||| |||||||||||||| ||||| |||||||||||||||||  ||| ||||||||||| | ||| |  |  ||| |||||||||||||||||||||||    
T  38595240 acaagcacactttctcttttctctcatcttctctcttcctaatatatggggtgtacaagggtgtatgg--aaataatggatgtctatgtatcattactct 38595337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 6 - 67
Target Start/End: Complemental strand, 49811543 - 49811482
Alignment:
Q  6 gcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||||| |||||||||||||| |||||||||||||||||||||||  ||| |||| ||||||    
T  49811543 gcacaagcacactttctcttttctctcctcttctctcttcctaatgtatgtggtgcacaagg 49811482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 66
Target Start/End: Original strand, 43216 - 43276
Alignment:
Q  6 gcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaag 66  Q
    |||||| |||||||||||||| |||||||| |||||||| ||||| |||| ||||||||||    
T  43216 gcacaagcacactttctcttttctctcctcctctctctttctaatgcatggggtgtacaag 43276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 23597108 - 23597044
Alignment:
Q  5 tgcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaaggat 69  Q
    ||||||| |||||||| ||||| ||||||| |||||| |||||| |||||||||||| |||||||    
T  23597108 tgcacaaacacactttatcttttctctcctattctctattcctagttcatgaggtgtccaaggat 23597044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 8 - 67
Target Start/End: Original strand, 3000405 - 3000464
Alignment:
Q  8 acaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||| |||||||||||||| ||||| |||||||||||||||||  ||| |||||||||||    
T  3000405 acaagcacactttctcttttctctcatcttctctcttcctaatatatggggtgtacaagg 3000464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 14 - 69
Target Start/End: Complemental strand, 37926446 - 37926391
Alignment:
Q  14 acactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaaggat 69  Q
    ||||||||||||| |||| ||||||||||||||||||  ||| |||||||||||||    
T  37926446 acactttctcttttctcttctcttctctcttcctaatgtatggggtgtacaaggat 37926391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 44548397 - 44548342
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttcctaattcatga 56  Q
    |||| |||||| |||||||||||||| ||||| ||||||||||||||||| |||||    
T  44548397 accccgcacaagcacactttctcttttctctcttcttctctcttcctaatgcatga 44548342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 71 - 105
Target Start/End: Original strand, 27564801 - 27564835
Alignment:
Q  71 tattgccacctaaggatgtctatgtatcattactc 105  Q
    |||||||||||||||||||||||||||||||||||    
T  27564801 tattgccacctaaggatgtctatgtatcattactc 27564835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 45044581 - 45044515
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||| |||||| |||| ||||||||| |||| ||||||||||||||||||  ||| |||||||||||    
T  45044581 accccgcacaaacacattttctcttttctcttctcttctctcttcctaatgtatggggtgtacaagg 45044515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 66
Target Start/End: Original strand, 47748536 - 47748586
Alignment:
Q  16 actttctctttcctctcctcttctctcttcctaattcatgaggtgtacaag 66  Q
    |||||||||||| ||| |||||||||||||||||| |||| ||||||||||    
T  47748536 actttctctttcttcttctcttctctcttcctaatacatggggtgtacaag 47748586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 71 - 109
Target Start/End: Original strand, 51898749 - 51898787
Alignment:
Q  71 tattgccacctaaggatgtctatgtatcattactctaaa 109  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  51898749 tattgccacctaaagatgtctatgtatcattactctaaa 51898787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 8346409 - 8346344
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctc-ttctctcttcctaattcatgaggtgtacaa 65  Q
    ||||||||||| |||||||||||||| |||||||| || |||||||||||| ||||  ||||||||    
T  8346409 accctgcacaagcacactttctcttttctctcctctttttctcttcctaatgcatggagtgtacaa 8346344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 67
Target Start/End: Complemental strand, 41608501 - 41608448
Alignment:
Q  14 acactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||||||||||||| ||| |||||||||||||||||| |||  |||||||||||    
T  41608501 acactttctctttcttcttctcttctctcttcctaatacatagggtgtacaagg 41608448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 11152399 - 11152331
Alignment:
Q  1 accctgcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaaggat 69  Q
    |||| |||||| ||| |||||| ||||||||||||||||||||||| | | |||| |||||| ||||||    
T  11152399 accccgcacaagcacgctttctttttcctctcctcttctctcttcccagtgcatggggtgtagaaggat 11152331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 7 - 55
Target Start/End: Original strand, 44454064 - 44454112
Alignment:
Q  7 cacaatcacactttctctttcctctcctcttctctcttcctaattcatg 55  Q
    ||||| |||||||| ||||||||||| ||||||||||||||||| ||||    
T  44454064 cacaagcacactttttctttcctctcatcttctctcttcctaatgcatg 44454112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 71 - 111
Target Start/End: Original strand, 48716348 - 48716388
Alignment:
Q  71 tattgccacctaaggatgtctatgtatcattactctaaaaa 111  Q
    ||||||||||||||| ||||||||||||||||||| |||||    
T  48716348 tattgccacctaagggtgtctatgtatcattactcaaaaaa 48716388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 64 - 108
Target Start/End: Complemental strand, 50630499 - 50630455
Alignment:
Q  64 aaggatatattgccacctaaggatgtctatgtatcattactctaa 108  Q
    |||||| ||||||||||||||| | ||||||||||||||||||||    
T  50630499 aaggatgtattgccacctaagggtatctatgtatcattactctaa 50630455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 106
Target Start/End: Complemental strand, 2581949 - 2581914
Alignment:
Q  71 tattgccacctaaggatgtctatgtatcattactct 106  Q
    ||||||||||||||| ||||||||||||||||||||    
T  2581949 tattgccacctaagggtgtctatgtatcattactct 2581914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 106
Target Start/End: Original strand, 23597157 - 23597192
Alignment:
Q  71 tattgccacctaaggatgtctatgtatcattactct 106  Q
    ||||||||||||| ||||||||||||||||||||||    
T  23597157 tattgccacctaatgatgtctatgtatcattactct 23597192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 106
Target Start/End: Complemental strand, 32813281 - 32813246
Alignment:
Q  71 tattgccacctaaggatgtctatgtatcattactct 106  Q
    |||||||||||||||||||||||||||||| |||||    
T  32813281 tattgccacctaaggatgtctatgtatcataactct 32813246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 106
Target Start/End: Original strand, 38632387 - 38632422
Alignment:
Q  71 tattgccacctaaggatgtctatgtatcattactct 106  Q
    ||||||||||||||| ||||||||||||||||||||    
T  38632387 tattgccacctaagggtgtctatgtatcattactct 38632422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 71 - 105
Target Start/End: Original strand, 9474942 - 9474976
Alignment:
Q  71 tattgccacctaaggatgtctatgtatcattactc 105  Q
    ||||||||||||||| |||||||||||||||||||    
T  9474942 tattgccacctaagggtgtctatgtatcattactc 9474976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 71 - 105
Target Start/End: Complemental strand, 37649232 - 37649198
Alignment:
Q  71 tattgccacctaaggatgtctatgtatcattactc 105  Q
    ||||||||||||| |||||||||||||||||||||    
T  37649232 tattgccacctaaagatgtctatgtatcattactc 37649198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 68 - 105
Target Start/End: Original strand, 3302596 - 3302633
Alignment:
Q  68 atatattgccacctaaggatgtctatgtatcattactc 105  Q
    |||||||| ||||||||||||| |||||||||||||||    
T  3302596 atatattgtcacctaaggatgtatatgtatcattactc 3302633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 71 - 111
Target Start/End: Original strand, 41608559 - 41608599
Alignment:
Q  71 tattgccacctaaggatgtctatgtatcattactctaaaaa 111  Q
    ||||||||||||||||||| |||||||||| |||| |||||    
T  41608559 tattgccacctaaggatgtttatgtatcataactcaaaaaa 41608599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1268 (Bit Score: 45; Significance: 3e-16; HSPs: 2)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 6 - 66
Target Start/End: Complemental strand, 945 - 885
Alignment:
Q  6 gcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaag 66  Q
    |||||| |||||||||||||||||||||||||||||||||||| | |||| ||||||||||    
T  945 gcacaagcacactttctctttcctctcctcttctctcttcctagtgcatggggtgtacaag 885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1268; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 71 - 105
Target Start/End: Original strand, 995 - 1029
Alignment:
Q  71 tattgccacctaaggatgtctatgtatcattactc 105  Q
    ||||||||||||| |||||||||||||||||||||    
T  995 tattgccacctaaagatgtctatgtatcattactc 1029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1267 (Bit Score: 45; Significance: 3e-16; HSPs: 2)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 6 - 66
Target Start/End: Complemental strand, 945 - 885
Alignment:
Q  6 gcacaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaag 66  Q
    |||||| |||||||||||||||||||||||||||||||||||| | |||| ||||||||||    
T  945 gcacaagcacactttctctttcctctcctcttctctcttcctagtgcatggggtgtacaag 885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1267; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 71 - 105
Target Start/End: Original strand, 995 - 1029
Alignment:
Q  71 tattgccacctaaggatgtctatgtatcattactc 105  Q
    ||||||||||||| |||||||||||||||||||||    
T  995 tattgccacctaaagatgtctatgtatcattactc 1029  T

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Target: scaffold0321 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 8 - 67
Target Start/End: Complemental strand, 10123 - 10064
Alignment:
Q  8 acaatcacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||| |||||||||||||| ||||||||||||||||||||||| |||  |||||||||||    
T  10123 acaagcacactttctcttttctctcctcttctctcttcctaatgcatagggtgtacaagg 10064  T

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Target: scaffold0237 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 67
Target Start/End: Original strand, 4120 - 4174
Alignment:
Q  13 cacactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||||||||||||| |||| |||||||||||||||||| |||| |||||||||||    
T  4120 cacactttctcttttctcttctcttctctcttcctaatgcatggggtgtacaagg 4174  T

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Target: scaffold0316 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 18 - 48
Target Start/End: Original strand, 17199 - 17229
Alignment:
Q  18 tttctctttcctctcctcttctctcttccta 48  Q
    |||||||||||||||||||||||||||||||    
T  17199 tttctctttcctctcctcttctctcttccta 17229  T

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Target: scaffold0110 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 67
Target Start/End: Complemental strand, 8867 - 8818
Alignment:
Q  18 tttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    ||||||||||||| | |||||||||||||||||  ||| |||||||||||    
T  8867 tttctctttcctcccatcttctctcttcctaatatatggggtgtacaagg 8818  T

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Target: scaffold0018 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 67
Target Start/End: Original strand, 152590 - 152643
Alignment:
Q  14 acactttctctttcctctcctcttctctcttcctaattcatgaggtgtacaagg 67  Q
    |||||||||||||| ||| |||||||||||| ||||| |||| | |||||||||    
T  152590 acactttctctttcttcttctcttctctctttctaatacatgggatgtacaagg 152643  T

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