View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20719_low_3 (Length: 263)

Name: NF20719_low_3
Description: NF20719
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20719_low_3
NF20719_low_3
[»] chr5 (24 HSPs)
chr5 (18-202)||(38943753-38943937)
chr5 (201-263)||(18183457-18183519)
chr5 (202-263)||(24331555-24331616)
chr5 (204-263)||(2865243-2865302)
chr5 (200-263)||(8647926-8647989)
chr5 (204-263)||(19359624-19359683)
chr5 (201-263)||(15372361-15372423)
chr5 (205-263)||(29455230-29455288)
chr5 (206-263)||(5819417-5819474)
chr5 (206-262)||(8647438-8647494)
chr5 (204-263)||(5818927-5818986)
chr5 (206-261)||(7349507-7349562)
chr5 (204-263)||(24362324-24362383)
chr5 (206-263)||(164191-164248)
chr5 (200-261)||(8461421-8461482)
chr5 (204-253)||(14464018-14464067)
chr5 (206-263)||(19359136-19359193)
chr5 (202-256)||(15708967-15709021)
chr5 (203-263)||(14215731-14215791)
chr5 (204-263)||(8460928-8460987)
chr5 (208-263)||(15371873-15371927)
chr5 (204-263)||(18182968-18183027)
chr5 (207-263)||(4222210-4222266)
chr5 (208-256)||(14215243-14215291)
[»] chr2 (31 HSPs)
chr2 (199-263)||(26538567-26538631)
chr2 (202-261)||(43058822-43058881)
chr2 (205-263)||(7446341-7446399)
chr2 (201-263)||(18451319-18451381)
chr2 (201-263)||(20440519-20440581)
chr2 (204-261)||(28847185-28847242)
chr2 (203-262)||(239350-239409)
chr2 (204-263)||(11091008-11091067)
chr2 (204-263)||(22374318-22374377)
chr2 (200-263)||(28616607-28616670)
chr2 (201-263)||(7446834-7446896)
chr2 (205-263)||(18450829-18450887)
chr2 (205-263)||(20444748-20444806)
chr2 (207-263)||(35781151-35781207)
chr2 (206-262)||(43058333-43058389)
chr2 (204-263)||(1978106-1978165)
chr2 (204-263)||(1978597-1978656)
chr2 (204-263)||(11090519-11090578)
chr2 (204-263)||(22374813-22374872)
chr2 (205-256)||(28617109-28617160)
chr2 (200-263)||(40027134-40027197)
chr2 (208-263)||(40815347-40815402)
chr2 (201-256)||(40815840-40815895)
chr2 (205-263)||(26538096-26538154)
chr2 (209-263)||(40027628-40027682)
chr2 (207-263)||(239840-239896)
chr2 (203-261)||(3025463-3025521)
chr2 (209-263)||(8425848-8425902)
chr2 (209-263)||(14432145-14432199)
chr2 (208-262)||(15551501-15551555)
chr2 (206-262)||(35779708-35779764)
[»] chr7 (19 HSPs)
chr7 (204-263)||(35289389-35289448)
chr7 (195-263)||(2658828-2658896)
chr7 (200-263)||(19591013-19591076)
chr7 (200-263)||(38859129-38859192)
chr7 (206-263)||(19590525-19590582)
chr7 (200-261)||(37787257-37787318)
chr7 (204-263)||(4478188-4478247)
chr7 (205-263)||(37786766-37786824)
chr7 (198-263)||(32004606-32004671)
chr7 (204-257)||(34533789-34533842)
chr7 (204-263)||(19830418-19830477)
chr7 (205-260)||(19830910-19830965)
chr7 (209-263)||(29100339-29100393)
chr7 (206-263)||(35288903-35288960)
chr7 (209-261)||(4641443-4641495)
chr7 (205-261)||(38858642-38858698)
chr7 (204-263)||(34534279-34534338)
chr7 (206-263)||(32005102-32005159)
chr7 (202-251)||(38160947-38160996)
[»] chr6 (28 HSPs)
chr6 (204-263)||(1149463-1149522)
chr6 (197-263)||(11444978-11445044)
chr6 (197-262)||(11445476-11445541)
chr6 (202-263)||(22219841-22219902)
chr6 (203-263)||(12935154-12935214)
chr6 (204-263)||(20741098-20741157)
chr6 (205-263)||(23073998-23074056)
chr6 (205-257)||(31470314-31470366)
chr6 (204-263)||(18257135-18257194)
chr6 (204-263)||(23075616-23075675)
chr6 (204-262)||(12935646-12935704)
chr6 (206-263)||(11277070-11277127)
chr6 (209-262)||(18504922-18504975)
chr6 (203-263)||(2319669-2319729)
chr6 (205-257)||(15828135-15828187)
chr6 (207-263)||(18505407-18505463)
chr6 (202-262)||(28472633-28472693)
chr6 (202-262)||(29859822-29859882)
chr6 (209-263)||(10899942-10899996)
chr6 (201-263)||(10900418-10900480)
chr6 (205-263)||(20741592-20741650)
chr6 (206-263)||(18257625-18257682)
chr6 (205-259)||(11276589-11276643)
chr6 (206-263)||(1149920-1149977)
chr6 (209-262)||(2322707-2322760)
chr6 (206-263)||(4811372-4811429)
chr6 (207-256)||(15827639-15827688)
chr6 (202-263)||(31470804-31470865)
[»] chr1 (32 HSPs)
chr1 (204-263)||(18984117-18984176)
chr1 (202-263)||(21856038-21856099)
chr1 (204-261)||(50970276-50970333)
chr1 (207-263)||(8678542-8678598)
chr1 (205-261)||(39154510-39154566)
chr1 (205-260)||(5540309-5540364)
chr1 (204-263)||(26859547-26859606)
chr1 (206-257)||(29306953-29307004)
chr1 (208-263)||(33144407-33144462)
chr1 (197-263)||(9018964-9019030)
chr1 (204-262)||(15173582-15173640)
chr1 (205-263)||(50970766-50970824)
chr1 (206-263)||(8679029-8679086)
chr1 (201-262)||(29870108-29870169)
chr1 (207-263)||(4636459-4636515)
chr1 (207-263)||(5539817-5539873)
chr1 (199-263)||(15646185-15646249)
chr1 (208-263)||(47826966-47827021)
chr1 (196-262)||(9019452-9019518)
chr1 (209-263)||(15173099-15173153)
chr1 (205-259)||(15646687-15646741)
chr1 (205-263)||(18984607-18984665)
chr1 (200-262)||(26859053-26859115)
chr1 (205-263)||(29869619-29869677)
chr1 (206-263)||(29307430-29307487)
chr1 (214-263)||(33143925-33143974)
chr1 (206-262)||(21856532-21856588)
chr1 (208-263)||(17433703-17433758)
chr1 (197-263)||(2733445-2733511)
chr1 (209-263)||(5963066-5963120)
chr1 (205-263)||(52268289-52268347)
chr1 (207-263)||(5962579-5962635)
[»] chr3 (32 HSPs)
chr3 (202-263)||(29801904-29801965)
chr3 (203-262)||(20840557-20840616)
chr3 (204-263)||(31779140-31779199)
chr3 (200-263)||(43973928-43973991)
chr3 (205-263)||(31778652-31778710)
chr3 (201-263)||(32535451-32535513)
chr3 (201-262)||(24301045-24301106)
chr3 (205-262)||(39555577-39555634)
chr3 (206-263)||(39556065-39556122)
chr3 (201-263)||(26837843-26837905)
chr3 (201-263)||(30104477-30104539)
chr3 (204-257)||(4275858-4275911)
chr3 (205-262)||(20841050-20841107)
chr3 (208-257)||(25853721-25853770)
chr3 (203-263)||(5137469-5137529)
chr3 (201-261)||(37727420-37727480)
chr3 (207-263)||(51473429-51473485)
chr3 (203-262)||(48452986-48453045)
chr3 (205-263)||(37726928-37726986)
chr3 (205-262)||(23644461-23644518)
chr3 (206-263)||(25853234-25853291)
chr3 (205-262)||(27393660-27393717)
chr3 (205-262)||(27394066-27394123)
chr3 (203-263)||(17464488-17464548)
chr3 (201-259)||(23644957-23645015)
chr3 (209-263)||(25612465-25612519)
chr3 (209-263)||(26274570-26274624)
chr3 (205-263)||(30098251-30098309)
chr3 (204-262)||(37222060-37222118)
chr3 (206-263)||(29801356-29801413)
chr3 (209-262)||(32534962-32535015)
chr3 (206-263)||(50116897-50116954)
[»] chr8 (22 HSPs)
chr8 (201-261)||(34541038-34541098)
chr8 (200-263)||(11656449-11656512)
chr8 (204-263)||(41681132-41681191)
chr8 (197-263)||(19176281-19176347)
chr8 (202-263)||(19176778-19176839)
chr8 (209-263)||(9928912-9928966)
chr8 (205-263)||(9930145-9930203)
chr8 (202-256)||(12571859-12571913)
chr8 (205-263)||(13225127-13225185)
chr8 (205-258)||(11656950-11657003)
chr8 (202-263)||(33742918-33742979)
chr8 (207-263)||(31133708-31133764)
chr8 (204-263)||(4629795-4629854)
chr8 (200-263)||(9178123-9178186)
chr8 (204-263)||(31133218-31133277)
chr8 (205-263)||(44831246-44831304)
chr8 (203-261)||(44831735-44831793)
chr8 (206-259)||(41681626-41681679)
chr8 (209-261)||(4630276-4630328)
chr8 (209-253)||(12572349-12572393)
chr8 (199-262)||(10918119-10918182)
chr8 (209-263)||(33328161-33328215)
[»] chr4 (34 HSPs)
chr4 (195-263)||(22434168-22434236)
chr4 (203-263)||(23494931-23494991)
chr4 (204-263)||(15523233-15523292)
chr4 (204-263)||(51021283-51021342)
chr4 (201-262)||(11153636-11153697)
chr4 (204-263)||(25447724-25447783)
chr4 (200-263)||(25937664-25937727)
chr4 (206-261)||(35363091-35363146)
chr4 (205-263)||(15523722-15523780)
chr4 (200-261)||(4220049-4220110)
chr4 (202-263)||(20958347-20958408)
chr4 (206-263)||(25447247-25447304)
chr4 (206-263)||(46193405-46193462)
chr4 (202-262)||(22434665-22434725)
chr4 (192-263)||(25938159-25938230)
chr4 (208-263)||(46193893-46193948)
chr4 (208-262)||(4219559-4219613)
chr4 (205-263)||(16318264-16318322)
chr4 (203-257)||(18764014-18764068)
chr4 (203-257)||(20471005-20471059)
chr4 (209-263)||(48526669-48526723)
chr4 (206-263)||(45082912-45082969)
chr4 (203-263)||(12234326-12234386)
chr4 (208-263)||(2118295-2118350)
chr4 (208-263)||(23494445-23494500)
chr4 (204-263)||(33109952-33110011)
chr4 (208-263)||(38962307-38962362)
chr4 (204-263)||(54995555-54995614)
chr4 (205-263)||(10258375-10258433)
chr4 (201-263)||(51020792-51020854)
chr4 (206-263)||(12234817-12234874)
chr4 (208-261)||(33109686-33109739)
chr4 (206-262)||(16691560-16691616)
chr4 (204-260)||(48293592-48293648)
[»] scaffold1223 (2 HSPs)
scaffold1223 (206-263)||(1229-1286)
scaffold1223 (208-263)||(755-810)
[»] scaffold0951 (2 HSPs)
scaffold0951 (203-263)||(2155-2215)
scaffold0951 (204-263)||(1665-1724)
[»] scaffold0295 (2 HSPs)
scaffold0295 (203-263)||(4790-4850)
scaffold0295 (208-257)||(5285-5334)
[»] scaffold0176 (1 HSPs)
scaffold0176 (200-263)||(19109-19172)
[»] scaffold0057 (2 HSPs)
scaffold0057 (209-259)||(61950-62000)
scaffold0057 (204-262)||(61026-61084)
[»] scaffold0417 (1 HSPs)
scaffold0417 (206-263)||(11111-11168)
[»] scaffold0019 (1 HSPs)
scaffold0019 (202-263)||(134161-134222)
[»] scaffold0432 (1 HSPs)
scaffold0432 (209-256)||(10367-10414)
[»] scaffold0273 (1 HSPs)
scaffold0273 (204-263)||(4695-4754)
[»] scaffold0027 (2 HSPs)
scaffold0027 (209-262)||(42172-42225)
scaffold0027 (202-263)||(42646-42707)
[»] scaffold1585 (1 HSPs)
scaffold1585 (207-251)||(568-612)
[»] scaffold0007 (1 HSPs)
scaffold0007 (209-263)||(64793-64847)


Alignment Details
Target: chr5 (Bit Score: 181; Significance: 7e-98; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 18 - 202
Target Start/End: Complemental strand, 38943937 - 38943753
Alignment:
Q  18 ttaataaattttcaaatgtcgaaatttacatatatgtttaatgtctagggggtcattgatgttactgctataagggtgcaatgcttctattgaagttgcc 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38943937 ttaataaattttcaaatgtcgaaatttacatatatgtttaatgtctagggggtcattgatgttactgctataagggtgcaatgcttctattgaagttgcc 38943838  T
Q  118 acctgatagttatttttcatgcgtaatgtagttgtgtggcagcaactatttggtggaggaatcattgaaggaaaaccattaaatt 202  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  38943837 acctgatagttatttttcatgcgtaatgtagttgtgtggcagcaactatttggtggaggaatcattgaaggaaaacccttaaatt 38943753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 201 - 263
Target Start/End: Complemental strand, 18183519 - 18183457
Alignment:
Q  201 ttttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    ||||||||||||||||||||||  |||||||| ||||| ||||||||||||||||||||||||    
T  18183519 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccc 18183457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 202 - 263
Target Start/End: Original strand, 24331555 - 24331616
Alignment:
Q  202 tttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    |||||||||||||||||||||  |||||||| |||| |||||||||||||||||||||||||    
T  24331555 tttaggcttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgccc 24331616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 204 - 263
Target Start/End: Complemental strand, 2865302 - 2865243
Alignment:
Q  204 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    |||||||||||||||||||  |||||||| ||||| ||||||||||||||||||||||||    
T  2865302 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccc 2865243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 200 - 263
Target Start/End: Complemental strand, 8647989 - 8647926
Alignment:
Q  200 attttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    |||||||||||||||||||||||  |||||||| ||||| ||||||||||||||| ||||||||    
T  8647989 attttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgccc 8647926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 204 - 263
Target Start/End: Complemental strand, 19359683 - 19359624
Alignment:
Q  204 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    |||||||||||||||||||  |||||||| ||||| ||||||||||||||||||||||||    
T  19359683 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccc 19359624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 201 - 263
Target Start/End: Complemental strand, 15372423 - 15372361
Alignment:
Q  201 ttttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    ||||||| ||||||||||||||  |||||||| ||||| ||||||||||||||||||||||||    
T  15372423 ttttaggtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccc 15372361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 205 - 263
Target Start/End: Complemental strand, 29455288 - 29455230
Alignment:
Q  205 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    |||||||||||||| |||  |||||||| ||||||||||||||||||||||||||||||    
T  29455288 aggcttaattacacctttggtcctcgtgttttggtctactcacgaaactggtcctgccc 29455230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 206 - 263
Target Start/End: Complemental strand, 5819474 - 5819417
Alignment:
Q  206 ggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    |||||||||||||||||  |||||||| ||||| ||||||||||||||||||||||||    
T  5819474 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccc 5819417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 206 - 262
Target Start/End: Original strand, 8647438 - 8647494
Alignment:
Q  206 ggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcc 262  Q
    |||||||||||||||||  |||||||| ||||| |||||||||||||||||||||||    
T  8647438 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcc 8647494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 204 - 263
Target Start/End: Original strand, 5818927 - 5818986
Alignment:
Q  204 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    |||| ||||||||||||||  |||||||| ||||| ||||||||||||||||||||||||    
T  5818927 taggtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccc 5818986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 206 - 261
Target Start/End: Complemental strand, 7349562 - 7349507
Alignment:
Q  206 ggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgc 261  Q
    |||||||||||||||||  |||||||| |||||||||||||||||| |||||||||    
T  7349562 ggcttaattacacttttggtcctcgtgttttggtctactcacgaaattggtcctgc 7349507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 204 - 263
Target Start/End: Complemental strand, 24362383 - 24362324
Alignment:
Q  204 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    |||||||||||||||||||  |||||||  ||||| ||||||||||||||||||||||||    
T  24362383 taggcttaattacacttttggtcctcgtattttggcctactcacgaaactggtcctgccc 24362324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 206 - 263
Target Start/End: Original strand, 164191 - 164248
Alignment:
Q  206 ggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    |||||||||||||||||  |||||||| ||||  ||||||||||||||||||||||||    
T  164191 ggcttaattacacttttggtcctcgtgttttgacctactcacgaaactggtcctgccc 164248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 200 - 261
Target Start/End: Complemental strand, 8461482 - 8461421
Alignment:
Q  200 attttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgc 261  Q
    |||| ||||||||||||||||||  |||||||| ||||| ||||||||||||||| ||||||    
T  8461482 atttaaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgttcctgc 8461421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 204 - 253
Target Start/End: Complemental strand, 14464067 - 14464018
Alignment:
Q  204 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaact 253  Q
    |||||||||||||||||||| |||||||| ||||| ||||||||||||||    
T  14464067 taggcttaattacacttttagtcctcgtgttttggcctactcacgaaact 14464018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 206 - 263
Target Start/End: Original strand, 19359136 - 19359193
Alignment:
Q  206 ggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    |||||||||||||||||  ||||| || ||||| ||||||||||||||||||||||||    
T  19359136 ggcttaattacacttttggtcctcttgttttggcctactcacgaaactggtcctgccc 19359193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 202 - 256
Target Start/End: Original strand, 15708967 - 15709021
Alignment:
Q  202 tttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggt 256  Q
    |||||||||||||||||||||  |||| ||| ||||| |||||||||||||||||    
T  15708967 tttaggcttaattacacttttggtcctagtgttttggcctactcacgaaactggt 15709021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 203 - 263
Target Start/End: Complemental strand, 14215791 - 14215731
Alignment:
Q  203 ttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    ||||||||||||||| ||||  |||||||| ||||  ||||||||||||||| ||||||||    
T  14215791 ttaggcttaattacaattttggtcctcgtgttttgacctactcacgaaactgatcctgccc 14215731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 204 - 263
Target Start/End: Original strand, 8460928 - 8460987
Alignment:
Q  204 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    ||||||||||| |||||||  || ||||  ||||| ||||||||||||||||||||||||    
T  8460928 taggcttaattccacttttggtcatcgtattttggcctactcacgaaactggtcctgccc 8460987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 208 - 263
Target Start/End: Original strand, 15371873 - 15371927
Alignment:
Q  208 cttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    ||||||||||||||| ||||||||  ||||||||||||||| || |||||||||||    
T  15371873 cttaattacacttttgatcctcgtattttggtctactcacg-aattggtcctgccc 15371927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 204 - 263
Target Start/End: Original strand, 18182968 - 18183027
Alignment:
Q  204 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    |||| ||||||||||||||  || ||||| ||||| |||||||||||||||||| |||||    
T  18182968 taggtttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcatgccc 18183027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 263
Target Start/End: Complemental strand, 4222266 - 4222210
Alignment:
Q  207 gcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    ||||||||||||||||  |||||||| ||||| || ||||||||| ||||| |||||    
T  4222266 gcttaattacacttttggtcctcgtgttttgggcttctcacgaaaatggtcatgccc 4222210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 256
Target Start/End: Original strand, 14215243 - 14215291
Alignment:
Q  208 cttaattacacttttaatcctcgtgatttggtctactcacgaaactggt 256  Q
    |||||||||||||||  |||||||| |||||  ||||||||||||||||    
T  14215243 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggt 14215291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 4e-19; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 199 - 263
Target Start/End: Complemental strand, 26538631 - 26538567
Alignment:
Q  199 aattttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    ||||||||||||||||||||||||  |||||||| ||||| ||||||||||||||||||||||||    
T  26538631 aattttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccc 26538567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 202 - 261
Target Start/End: Complemental strand, 43058881 - 43058822
Alignment:
Q  202 tttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgc 261  Q
    ||||||||||||||||||||| ||||||||| ||||| ||||||||||||||||||||||    
T  43058881 tttaggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgc 43058822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 205 - 263
Target Start/End: Original strand, 7446341 - 7446399
Alignment:
Q  205 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    |||||||||||||||||| ||||||||| ||||||||||||| |||| |||||||||||    
T  7446341 aggcttaattacacttttgatcctcgtgttttggtctactcatgaaattggtcctgccc 7446399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 201 - 263
Target Start/End: Complemental strand, 18451381 - 18451319
Alignment:
Q  201 ttttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    ||||||||||||||||||||||  |||||||| ||||| ||||| ||||||||||||||||||    
T  18451381 ttttaggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgccc 18451319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 201 - 263
Target Start/End: Complemental strand, 20440581 - 20440519
Alignment:
Q  201 ttttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    ||||||||||||||||||||||  |||||||| ||||| | ||||||||||||||||||||||    
T  20440581 ttttaggcttaattacacttttggtcctcgtgttttggccaactcacgaaactggtcctgccc 20440519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 204 - 261
Target Start/End: Complemental strand, 28847242 - 28847185
Alignment:
Q  204 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgc 261  Q
    |||||||||||||| ||||  |||||||| ||||||||||||||||||||||||||||    
T  28847242 taggcttaattacatttttggtcctcgtgttttggtctactcacgaaactggtcctgc 28847185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 203 - 262
Target Start/End: Original strand, 239350 - 239409
Alignment:
Q  203 ttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcc 262  Q
    ||||||||||||||||||||  || ||||| ||||| |||||||||||||||||||||||    
T  239350 ttaggcttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcctgcc 239409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 204 - 263
Target Start/End: Complemental strand, 11091067 - 11091008
Alignment:
Q  204 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    |||||||||||||||||||  |||||||| ||||| |||||||||||||||||| |||||    
T  11091067 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgccc 11091008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 204 - 263
Target Start/End: Original strand, 22374318 - 22374377
Alignment:
Q  204 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    |||||||||||||||||||  |||||||| ||||| |||||||||||||||||| |||||    
T  22374318 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgccc 22374377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 200 - 263
Target Start/End: Original strand, 28616607 - 28616670
Alignment:
Q  200 attttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    ||||| |||||||||||||||||  |||||||| ||||| |||||||||||||||||| |||||    
T  28616607 atttttggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgccc 28616670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 201 - 263
Target Start/End: Complemental strand, 7446896 - 7446834
Alignment:
Q  201 ttttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    ||||||||||||||||| |||| ||||||||| ||||   |||||||||||||||||||||||    
T  7446896 ttttaggcttaattacatttttgatcctcgtgttttgccttactcacgaaactggtcctgccc 7446834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 205 - 263
Target Start/End: Original strand, 18450829 - 18450887
Alignment:
Q  205 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    ||||||||||||||||||  |||||||| ||||| ||||||||||||||||||| ||||    
T  18450829 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtccagccc 18450887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 205 - 263
Target Start/End: Original strand, 20444748 - 20444806
Alignment:
Q  205 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    ||||||||||||||||||  |||||||| ||||| | ||||||||||||||||||||||    
T  20444748 aggcttaattacacttttggtcctcgtgttttggccaactcacgaaactggtcctgccc 20444806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 207 - 263
Target Start/End: Complemental strand, 35781207 - 35781151
Alignment:
Q  207 gcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    |||||||||||||||| ||||||||| ||||| |||||||||||| ||||| |||||    
T  35781207 gcttaattacacttttgatcctcgtgttttggcctactcacgaaaatggtcatgccc 35781151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 206 - 262
Target Start/End: Original strand, 43058333 - 43058389
Alignment:
Q  206 ggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcc 262  Q
    ||||||||||||||||| ||||||||| ||||| | |||||| ||||||||||||||    
T  43058333 ggcttaattacacttttgatcctcgtgttttggccaactcactaaactggtcctgcc 43058389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 204 - 263
Target Start/End: Original strand, 1978106 - 1978165
Alignment:
Q  204 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    |||||||||||||| ||||  |||| ||| ||||| ||||||||||||||||||||||||    
T  1978106 taggcttaattacatttttggtccttgtgttttggcctactcacgaaactggtcctgccc 1978165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 204 - 263
Target Start/End: Complemental strand, 1978656 - 1978597
Alignment:
Q  204 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    |||||||||||||||||||  |||| ||| ||||| |||||||||||| |||||||||||    
T  1978656 taggcttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgccc 1978597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 204 - 263
Target Start/End: Original strand, 11090519 - 11090578
Alignment:
Q  204 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    |||| ||||||||||||||  |||||||| ||||| |||||||||||||| |||||||||    
T  11090519 taggtttaattacacttttggtcctcgtgttttggcctactcacgaaacttgtcctgccc 11090578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 204 - 263
Target Start/End: Complemental strand, 22374872 - 22374813
Alignment:
Q  204 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    |||||||||||||||||||  |||||||| ||||| |||||||||||| ||||| |||||    
T  22374872 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcttgccc 22374813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 205 - 256
Target Start/End: Complemental strand, 28617160 - 28617109
Alignment:
Q  205 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggt 256  Q
    ||||||||||||||||||  |||||||| ||||| |||||||||||||||||    
T  28617160 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggt 28617109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 200 - 263
Target Start/End: Original strand, 40027134 - 40027197
Alignment:
Q  200 attttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    |||| ||||||||||||||||||  || ||||| ||||| |||||||||||||||||| |||||    
T  40027134 atttaaggcttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcatgccc 40027197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 208 - 263
Target Start/End: Original strand, 40815347 - 40815402
Alignment:
Q  208 cttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    |||||||||||||||  |||||||| ||||| |||||||||||||||||| |||||    
T  40815347 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgccc 40815402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 201 - 256
Target Start/End: Complemental strand, 40815895 - 40815840
Alignment:
Q  201 ttttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggt 256  Q
    ||||||| ||||||||||||||  |||||||| ||||| |||||||||||||||||    
T  40815895 ttttaggtttaattacacttttggtcctcgtgttttggcctactcacgaaactggt 40815840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 205 - 263
Target Start/End: Original strand, 26538096 - 26538154
Alignment:
Q  205 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    ||||||||||||||||||  |||||||| |||||  |||||||||||||||| ||||||    
T  26538096 aggcttaattacacttttggtcctcgtgttttggcttactcacgaaactggttctgccc 26538154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 209 - 263
Target Start/End: Complemental strand, 40027682 - 40027628
Alignment:
Q  209 ttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    ||||||||||||||  |||||||| ||||| |||||||||||| |||||||||||    
T  40027682 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgccc 40027628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 207 - 263
Target Start/End: Complemental strand, 239896 - 239840
Alignment:
Q  207 gcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    ||||| ||||||||||  |||||||| ||||| |||||||||||| |||||||||||    
T  239896 gcttagttacacttttggtcctcgtgttttggcctactcacgaaattggtcctgccc 239840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 261
Target Start/End: Original strand, 3025463 - 3025521
Alignment:
Q  203 ttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgc 261  Q
    ||||| || |||||| ||||  |||||||| ||||| ||||||||||||||||||||||    
T  3025463 ttaggtttgattacatttttggtcctcgtgttttggcctactcacgaaactggtcctgc 3025521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 209 - 263
Target Start/End: Complemental strand, 8425902 - 8425848
Alignment:
Q  209 ttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    ||||||||||||||  | || ||| |||||||||||||||||| |||||||||||    
T  8425902 ttaattacacttttggttcttgtgttttggtctactcacgaaattggtcctgccc 8425848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 209 - 263
Target Start/End: Original strand, 14432145 - 14432199
Alignment:
Q  209 ttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    ||||||||||||||  |||||||| ||||| ||||||| |||||||||| |||||    
T  14432145 ttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcttgccc 14432199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 208 - 262
Target Start/End: Original strand, 15551501 - 15551555
Alignment:
Q  208 cttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcc 262  Q
    |||||||||||||||  |||||||| |||||| ||||||||||| ||||| ||||    
T  15551501 cttaattacacttttggtcctcgtgttttggtttactcacgaaaatggtcatgcc 15551555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 262
Target Start/End: Original strand, 35779708 - 35779764
Alignment:
Q  206 ggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcc 262  Q
    |||||||||||||||||  |||||||| ||||   ||||||||||| ||||||||||    
T  35779708 ggcttaattacacttttggtcctcgtgttttgacatactcacgaaaatggtcctgcc 35779764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 48; Significance: 2e-18; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 204 - 263
Target Start/End: Complemental strand, 35289448 - 35289389
Alignment:
Q  204 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    ||||||||||||||||||| ||||||||| ||||| ||||||||||||||||||||||||    
T  35289448 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgccc 35289389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 195 - 263
Target Start/End: Original strand, 2658828 - 2658896
Alignment:
Q  195 attaaattttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    ||||| || |||||||||||||||||||  |||||||| ||||| ||||||||||||||||||||||||    
T  2658828 attaatttctaggcttaattacactttttgtcctcgtgttttggcctactcacgaaactggtcctgccc 2658896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 200 - 263
Target Start/End: Complemental strand, 19591076 - 19591013
Alignment:
Q  200 attttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    |||||||||||||||||||||||  | |||||| ||||| ||||||||||||||||||||||||    
T  19591076 attttaggcttaattacacttttggtactcgtgttttggcctactcacgaaactggtcctgccc 19591013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 200 - 263
Target Start/End: Complemental strand, 38859192 - 38859129
Alignment:
Q  200 attttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    |||||||||||||||||||||||  |||||||| ||||| |||||||||||| |||||||||||    
T  38859192 attttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgccc 38859129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 206 - 263
Target Start/End: Original strand, 19590525 - 19590582
Alignment:
Q  206 ggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    |||||||||||||||||  |||||||| ||||| ||||||||||||||||||||||||    
T  19590525 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccc 19590582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 200 - 261
Target Start/End: Complemental strand, 37787318 - 37787257
Alignment:
Q  200 attttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgc 261  Q
    |||||||||||||||| ||||||  |||||||| ||||| ||||||||||||||||||||||    
T  37787318 attttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactggtcctgc 37787257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 204 - 263
Target Start/End: Complemental strand, 4478247 - 4478188
Alignment:
Q  204 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    |||| |||| ||||||||| ||||||||| ||||| ||||||||||||||||||||||||    
T  4478247 taggtttaagtacacttttgatcctcgtgttttggcctactcacgaaactggtcctgccc 4478188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 205 - 263
Target Start/End: Original strand, 37786766 - 37786824
Alignment:
Q  205 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    ||||||||||||||||||  |||||||| ||||| ||||| ||||||||||||||||||    
T  37786766 aggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgccc 37786824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 198 - 263
Target Start/End: Original strand, 32004606 - 32004671
Alignment:
Q  198 aaattttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    ||||| |||||||||||||||||||  |||||||| ||||| |||||||||||| || ||||||||    
T  32004606 aaattataggcttaattacacttttggtcctcgtgttttggcctactcacgaaattgatcctgccc 32004671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 204 - 257
Target Start/End: Original strand, 34533789 - 34533842
Alignment:
Q  204 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtc 257  Q
    |||||||||||||||||||  |||||||| ||||| ||||||||||||||||||    
T  34533789 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 34533842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 204 - 263
Target Start/End: Original strand, 19830418 - 19830477
Alignment:
Q  204 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    |||| ||||||||||||||  |||||||| ||||| |||||||||||||||||| |||||    
T  19830418 taggtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgccc 19830477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 205 - 260
Target Start/End: Complemental strand, 19830965 - 19830910
Alignment:
Q  205 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctg 260  Q
    ||||||||||||||||||  |||||||| ||||| |||||||| ||||||||||||    
T  19830965 aggcttaattacacttttggtcctcgtgttttggcctactcacaaaactggtcctg 19830910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 209 - 263
Target Start/End: Complemental strand, 29100393 - 29100339
Alignment:
Q  209 ttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    ||||||||||||||  |||||||| |||||||||||||| ||| |||||||||||    
T  29100393 ttaattacacttttggtcctcgtgttttggtctactcacaaaattggtcctgccc 29100339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 206 - 263
Target Start/End: Original strand, 35288903 - 35288960
Alignment:
Q  206 ggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    |||||||||||||||||  || ||||  ||||| ||||||||||||||||||||||||    
T  35288903 ggcttaattacacttttggtcatcgtattttggcctactcacgaaactggtcctgccc 35288960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 209 - 261
Target Start/End: Original strand, 4641443 - 4641495
Alignment:
Q  209 ttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgc 261  Q
    ||||||||||||||  |||||||| |||||  |||||||||||||||||||||    
T  4641443 ttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgc 4641495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 205 - 261
Target Start/End: Original strand, 38858642 - 38858698
Alignment:
Q  205 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgc 261  Q
    ||||||||| ||||||||  |||||||| |||||  |||||||||||||||||||||    
T  38858642 aggcttaataacacttttggtcctcgtgttttggcatactcacgaaactggtcctgc 38858698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 204 - 263
Target Start/End: Complemental strand, 34534338 - 34534279
Alignment:
Q  204 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    |||||||||||| ||||||  | |||||| ||||| ||||||||||||||| ||||||||    
T  34534338 taggcttaattatacttttggttctcgtgttttggcctactcacgaaactgatcctgccc 34534279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 206 - 263
Target Start/End: Complemental strand, 32005159 - 32005102
Alignment:
Q  206 ggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    |||||||||||||||||  ||||| || |||||  ||||||||||||||||| |||||    
T  32005159 ggcttaattacacttttggtcctcatgttttggcatactcacgaaactggtcatgccc 32005102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 202 - 251
Target Start/End: Original strand, 38160947 - 38160996
Alignment:
Q  202 tttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaa 251  Q
    |||||||||||||||||||||  |||||| | ||||| ||||||||||||    
T  38160947 tttaggcttaattacacttttggtcctcgggttttggcctactcacgaaa 38160996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 2e-18; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 204 - 263
Target Start/End: Original strand, 1149463 - 1149522
Alignment:
Q  204 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    ||||||||||||||||||| ||||||||| ||||| ||||||||||||||||||||||||    
T  1149463 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgccc 1149522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 197 - 263
Target Start/End: Original strand, 11444978 - 11445044
Alignment:
Q  197 taaattttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    ||||||||||||||||||||||||||  |||||||| ||||| ||||||||||| ||||||||||||    
T  11444978 taaattttaggcttaattacacttttggtcctcgtgttttggcctactcacgaagctggtcctgccc 11445044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 197 - 262
Target Start/End: Complemental strand, 11445541 - 11445476
Alignment:
Q  197 taaattttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcc 262  Q
    |||| |||||||||||||||||||||  |||||||| ||||| |||||||||||||||||||||||    
T  11445541 taaaatttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcc 11445476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 202 - 263
Target Start/End: Complemental strand, 22219902 - 22219841
Alignment:
Q  202 tttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    |||||||||||||||||||||  |||||||| ||||| ||||||||||||||||||||||||    
T  22219902 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccc 22219841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 203 - 263
Target Start/End: Original strand, 12935154 - 12935214
Alignment:
Q  203 ttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    ||||||||||||||||||||  |||||||| ||||| ||||||||||||||||||||||||    
T  12935154 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccc 12935214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 204 - 263
Target Start/End: Original strand, 20741098 - 20741157
Alignment:
Q  204 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    |||||||||||||||||||  |||||||| ||||| ||||||||||||||||||||||||    
T  20741098 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccc 20741157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 205 - 263
Target Start/End: Original strand, 23073998 - 23074056
Alignment:
Q  205 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    ||||||||||||||||||  |||||||| ||||| ||||||||||||||||||||||||    
T  23073998 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccc 23074056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 205 - 257
Target Start/End: Original strand, 31470314 - 31470366
Alignment:
Q  205 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtc 257  Q
    |||||||||||||||||| ||||||||| ||||| ||||||||||||||||||    
T  31470314 aggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtc 31470366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 204 - 263
Target Start/End: Original strand, 18257135 - 18257194
Alignment:
Q  204 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    |||||||||||||||||||  |||||||| |||||  |||||||||||||||||||||||    
T  18257135 taggcttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcctgccc 18257194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 204 - 263
Target Start/End: Complemental strand, 23075675 - 23075616
Alignment:
Q  204 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    |||||||||||||||||||  |||||||| ||||| |||||||||||||||||| |||||    
T  23075675 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgccc 23075616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 204 - 262
Target Start/End: Complemental strand, 12935704 - 12935646
Alignment:
Q  204 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcc 262  Q
    |||||||||||||||||||  |||||||| |||||  ||||||||||||||||||||||    
T  12935704 taggcttaattacacttttggtcctcgtgttttggcgtactcacgaaactggtcctgcc 12935646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 206 - 263
Target Start/End: Complemental strand, 11277127 - 11277070
Alignment:
Q  206 ggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    |||||||||||||||||  |||||||| |||||  |||||||||||||||||||||||    
T  11277127 ggcttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccc 11277070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 262
Target Start/End: Original strand, 18504922 - 18504975
Alignment:
Q  209 ttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcc 262  Q
    ||||||||||||||  |||||||| ||||| |||||||||||||||||||||||    
T  18504922 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcc 18504975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 203 - 263
Target Start/End: Original strand, 2319669 - 2319729
Alignment:
Q  203 ttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    ||||||||||||||| ||||  |||||||| ||||| |||||||||||||||||| |||||    
T  2319669 ttaggcttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcatgccc 2319729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 205 - 257
Target Start/End: Complemental strand, 15828187 - 15828135
Alignment:
Q  205 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtc 257  Q
    ||||||||||||||||||  |||||||| ||||| ||||||||||||||||||    
T  15828187 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 15828135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 207 - 263
Target Start/End: Complemental strand, 18505463 - 18505407
Alignment:
Q  207 gcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    ||||||||| ||||||  |||||||| ||||||||||||||||||||| ||||||||    
T  18505463 gcttaattatacttttggtcctcgtgttttggtctactcacgaaactgatcctgccc 18505407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 202 - 262
Target Start/End: Original strand, 28472633 - 28472693
Alignment:
Q  202 tttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcc 262  Q
    |||||||||||||||||||||  |||||||| ||||| | |||||||||| ||||||||||    
T  28472633 tttaggcttaattacacttttggtcctcgtgttttggccaactcacgaaagtggtcctgcc 28472693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 202 - 262
Target Start/End: Original strand, 29859822 - 29859882
Alignment:
Q  202 tttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcc 262  Q
    |||||||||||||||||||||  |||||||| ||||| | |||||||||| ||||||||||    
T  29859822 tttaggcttaattacacttttggtcctcgtgttttggccaactcacgaaagtggtcctgcc 29859882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 209 - 263
Target Start/End: Original strand, 10899942 - 10899996
Alignment:
Q  209 ttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    ||||||||||||||  || ||||| ||||| ||||||||||||||||||||||||    
T  10899942 ttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcctgccc 10899996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 201 - 263
Target Start/End: Complemental strand, 10900480 - 10900418
Alignment:
Q  201 ttttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    |||| |||||||||||||||||  |||||||  ||||| |||||||||||||||||| |||||    
T  10900480 tttttggcttaattacacttttggtcctcgtattttggcctactcacgaaactggtcatgccc 10900418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 205 - 263
Target Start/End: Complemental strand, 20741650 - 20741592
Alignment:
Q  205 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    ||||||||||||||| ||  |||||||| ||||| ||||||||||||||| ||||||||    
T  20741650 aggcttaattacactcttggtcctcgtgttttggcctactcacgaaactgatcctgccc 20741592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 206 - 263
Target Start/End: Complemental strand, 18257682 - 18257625
Alignment:
Q  206 ggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    |||||||||| ||||||  |||||||| ||||  ||||||||||||||||||||||||    
T  18257682 ggcttaattatacttttggtcctcgtgttttgacctactcacgaaactggtcctgccc 18257625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 259
Target Start/End: Original strand, 11276589 - 11276643
Alignment:
Q  205 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcct 259  Q
    |||||||||||||| |||| ||| |||| ||||||||||||| ||||||| ||||    
T  11276589 aggcttaattacacgtttagtccgcgtgttttggtctactcatgaaactgatcct 11276643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 206 - 263
Target Start/End: Complemental strand, 1149977 - 1149920
Alignment:
Q  206 ggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    |||||||||||||||||  |||||||| ||| | ||||||| |||||||||| |||||    
T  1149977 ggcttaattacacttttggtcctcgtgttttagcctactcatgaaactggtcatgccc 1149920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 209 - 262
Target Start/End: Complemental strand, 2322760 - 2322707
Alignment:
Q  209 ttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcc 262  Q
    ||||||||||||||  || ||||| |||||||||||||||||||| ||| ||||    
T  2322760 ttaattacacttttggtcttcgtgttttggtctactcacgaaactagtcttgcc 2322707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 206 - 263
Target Start/End: Original strand, 4811372 - 4811429
Alignment:
Q  206 ggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    |||||||||||||||||  |||  ||  |||||||||||||||||||||||| |||||    
T  4811372 ggcttaattacacttttggtcccagtattttggtctactcacgaaactggtcatgccc 4811429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 207 - 256
Target Start/End: Original strand, 15827639 - 15827688
Alignment:
Q  207 gcttaattacacttttaatcctcgtgatttggtctactcacgaaactggt 256  Q
    ||||||||||||||||  |||||||| |||||  ||||||||||||||||    
T  15827639 gcttaattacacttttggtcctcgtgttttggcttactcacgaaactggt 15827688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 202 - 263
Target Start/End: Complemental strand, 31470865 - 31470804
Alignment:
Q  202 tttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    |||| ||||||||||||||||  |||| ||| ||| | ||||||||||||||||| ||||||    
T  31470865 tttatgcttaattacacttttggtccttgtgttttagcctactcacgaaactggttctgccc 31470804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 48; Significance: 2e-18; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 204 - 263
Target Start/End: Original strand, 18984117 - 18984176
Alignment:
Q  204 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    |||||||||||||||||||  |||||||| ||||||||||||||||||||||||||||||    
T  18984117 taggcttaattacacttttggtcctcgtgttttggtctactcacgaaactggtcctgccc 18984176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 202 - 263
Target Start/End: Original strand, 21856038 - 21856099
Alignment:
Q  202 tttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    ||||| |||||||||||||||  |||||||| |||| |||||||||||||||||||||||||    
T  21856038 tttagacttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgccc 21856099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 204 - 261
Target Start/End: Original strand, 50970276 - 50970333
Alignment:
Q  204 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgc 261  Q
    |||||||||||||||||||  |||||||| ||||| ||||||||||||||||||||||    
T  50970276 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgc 50970333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 207 - 263
Target Start/End: Original strand, 8678542 - 8678598
Alignment:
Q  207 gcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    ||||||||||||||||  |||||||| ||||| ||||||||||||||||||||||||    
T  8678542 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccc 8678598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 205 - 261
Target Start/End: Complemental strand, 39154566 - 39154510
Alignment:
Q  205 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgc 261  Q
    ||||||||||||||||||  |||||||| ||||| ||||||||||||||||||||||    
T  39154566 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgc 39154510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 205 - 260
Target Start/End: Complemental strand, 5540364 - 5540309
Alignment:
Q  205 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctg 260  Q
    ||||||||||||||||||  |||||||| ||||| |||||||||||||||||||||    
T  5540364 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctg 5540309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 204 - 263
Target Start/End: Complemental strand, 26859606 - 26859547
Alignment:
Q  204 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    ||||||||||||||||||| ||||||||| ||||| ||||||||||||||  ||||||||    
T  26859606 taggcttaattacacttttgatcctcgtgttttgggctactcacgaaactaatcctgccc 26859547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 206 - 257
Target Start/End: Original strand, 29306953 - 29307004
Alignment:
Q  206 ggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtc 257  Q
    ||||||||||||||||| ||||||||| ||||| ||||||||||||||||||    
T  29306953 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtc 29307004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 208 - 263
Target Start/End: Complemental strand, 33144462 - 33144407
Alignment:
Q  208 cttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    |||||||||||||||  |||||||| ||||| ||||||||||||||||||||||||    
T  33144462 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccc 33144407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 197 - 263
Target Start/End: Original strand, 9018964 - 9019030
Alignment:
Q  197 taaattttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    |||| |||||||||||||||||||||  |||||||| ||||| ||||| ||||||||||| ||||||    
T  9018964 taaactttaggcttaattacacttttggtcctcgtgttttggcctactaacgaaactggttctgccc 9019030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 204 - 262
Target Start/End: Complemental strand, 15173640 - 15173582
Alignment:
Q  204 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcc 262  Q
    |||||||||||||||||||  |||||||| ||||| |||||||| ||||||||||||||    
T  15173640 taggcttaattacacttttggtcctcgtgttttggcctactcacaaaactggtcctgcc 15173582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 205 - 263
Target Start/End: Complemental strand, 50970824 - 50970766
Alignment:
Q  205 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    ||||||||||||||||||  |||||||| ||||| ||||| ||||||||||||||||||    
T  50970824 aggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgccc 50970766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 206 - 263
Target Start/End: Complemental strand, 8679086 - 8679029
Alignment:
Q  206 ggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    |||||||||||||||||  |||||||| ||||| ||||||||| ||||||||||||||    
T  8679086 ggcttaattacacttttggtcctcgtgttttggcctactcacggaactggtcctgccc 8679029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 262
Target Start/End: Complemental strand, 29870169 - 29870108
Alignment:
Q  201 ttttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcc 262  Q
    |||| |||||||||||||||||  |||||||| ||||| ||||||| |||||||||||||||    
T  29870169 tttttggcttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcctgcc 29870108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 207 - 263
Target Start/End: Complemental strand, 4636515 - 4636459
Alignment:
Q  207 gcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    ||||||||||||||||  |||||||| ||||| ||||||||||||||| ||||||||    
T  4636515 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgccc 4636459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 207 - 263
Target Start/End: Original strand, 5539817 - 5539873
Alignment:
Q  207 gcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    ||||||||||||||||  |||||||| ||||| |||||||||||| |||||||||||    
T  5539817 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgccc 5539873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 199 - 263
Target Start/End: Original strand, 15646185 - 15646249
Alignment:
Q  199 aattttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    |||| |||||||||||| ||||||  |||||||| ||||| |||||||||||||||||| |||||    
T  15646185 aattctaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactggtcatgccc 15646249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 208 - 263
Target Start/End: Original strand, 47826966 - 47827021
Alignment:
Q  208 cttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    |||||||||||||||  |||||||| |||||||||||||||||| ||||| |||||    
T  47826966 cttaattacacttttggtcctcgtgttttggtctactcacgaaaatggtcatgccc 47827021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 196 - 262
Target Start/End: Complemental strand, 9019518 - 9019452
Alignment:
Q  196 ttaaattttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcc 262  Q
    ||||| |||||||||||||||||||||  |||||||| ||||  |||||||| |||||||| |||||    
T  9019518 ttaaagtttaggcttaattacacttttggtcctcgtgttttgacctactcacaaaactggttctgcc 9019452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 209 - 263
Target Start/End: Original strand, 15173099 - 15173153
Alignment:
Q  209 ttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    ||||||||||||||  |||||||| ||||| |||||||||||||| |||||||||    
T  15173099 ttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcctgccc 15173153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 205 - 259
Target Start/End: Complemental strand, 15646741 - 15646687
Alignment:
Q  205 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcct 259  Q
    ||||||||||||||||||  |||||||| ||||| ||||||||||||||| ||||    
T  15646741 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcct 15646687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 205 - 263
Target Start/End: Complemental strand, 18984665 - 18984607
Alignment:
Q  205 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    ||||||||||||||||||  |||| ||| ||||| |||||||||||| |||||||||||    
T  18984665 aggcttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgccc 18984607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 200 - 262
Target Start/End: Original strand, 26859053 - 26859115
Alignment:
Q  200 attttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcc 262  Q
    ||||| |||||||||||||||||  |||| ||| ||||| ||||| |||||||||||||||||    
T  26859053 atttttggcttaattacacttttggtccttgtgttttggcctactaacgaaactggtcctgcc 26859115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 205 - 263
Target Start/End: Original strand, 29869619 - 29869677
Alignment:
Q  205 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    ||||||||||||||||||  |||||||| |||||  ||||||||||||||||| |||||    
T  29869619 aggcttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcttgccc 29869677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 206 - 263
Target Start/End: Complemental strand, 29307487 - 29307430
Alignment:
Q  206 ggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    ||||||||| |||||||  |||||||| ||||  ||||||||||||||||||||||||    
T  29307487 ggcttaattgcacttttggtcctcgtgttttgacctactcacgaaactggtcctgccc 29307430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 214 - 263
Target Start/End: Original strand, 33143925 - 33143974
Alignment:
Q  214 tacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    |||||||||  |||||||| ||||| ||||||||||||||||||||||||    
T  33143925 tacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccc 33143974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 206 - 262
Target Start/End: Complemental strand, 21856588 - 21856532
Alignment:
Q  206 ggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcc 262  Q
    |||||||||||||||||  |||||||| ||||| ||||||| ||||||| |||||||    
T  21856588 ggcttaattacacttttggtcctcgtgttttggcctactcatgaaactgatcctgcc 21856532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 208 - 263
Target Start/End: Complemental strand, 17433758 - 17433703
Alignment:
Q  208 cttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    |||||||||||||||  |||||||| | ||| |||||||||||||||||| |||||    
T  17433758 cttaattacacttttggtcctcgtgttctggcctactcacgaaactggtcatgccc 17433703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 263
Target Start/End: Complemental strand, 2733511 - 2733445
Alignment:
Q  197 taaattttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    ||||||||||||||||||| ||||||  |||| ||| ||||| ||| || ||||| |||||||||||    
T  2733511 taaattttaggcttaattatacttttggtccttgtgttttggcctattcgcgaaattggtcctgccc 2733445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 209 - 263
Target Start/End: Complemental strand, 5963120 - 5963066
Alignment:
Q  209 ttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    ||||||||||||||  |||||||| ||||| ||||||||||||||| || |||||    
T  5963120 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgccc 5963066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 263
Target Start/End: Original strand, 52268289 - 52268347
Alignment:
Q  205 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    ||||||||||||||||||  |||||||  ||||| || ||||||||| |||||||||||    
T  52268289 aggcttaattacacttttggtcctcgtattttggcctgctcacgaaattggtcctgccc 52268347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 263
Target Start/End: Original strand, 5962579 - 5962635
Alignment:
Q  207 gcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    ||||||||||| ||||  |||||||| | ||||||| ||||||||||||||| ||||    
T  5962579 gcttaattacatttttggtcctcgtgttatggtctattcacgaaactggtccggccc 5962635  T

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Target: chr3 (Bit Score: 46; Significance: 3e-17; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 202 - 263
Target Start/End: Complemental strand, 29801965 - 29801904
Alignment:
Q  202 tttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    ||||||||||||||||||||| ||||||||  ||||| ||||||||||||||||||||||||    
T  29801965 tttaggcttaattacacttttgatcctcgtattttggcctactcacgaaactggtcctgccc 29801904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 203 - 262
Target Start/End: Original strand, 20840557 - 20840616
Alignment:
Q  203 ttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcc 262  Q
    ||||||||||||||||||||  |||||||| ||||| |||||||||||||||||||||||    
T  20840557 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcc 20840616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 204 - 263
Target Start/End: Complemental strand, 31779199 - 31779140
Alignment:
Q  204 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    |||||||||||||||||||  |||||||| ||||| ||||||||||||||||||||||||    
T  31779199 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccc 31779140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 200 - 263
Target Start/End: Complemental strand, 43973991 - 43973928
Alignment:
Q  200 attttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    |||||||||||||||||||||||  |||||||| ||||| ||||||||||||||||| ||||||    
T  43973991 attttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctgccc 43973928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 205 - 263
Target Start/End: Original strand, 31778652 - 31778710
Alignment:
Q  205 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    ||||||||||||||||||  |||||||| ||||||||||||| ||||||||||||||||    
T  31778652 aggcttaattacacttttggtcctcgtgttttggtctactcatgaaactggtcctgccc 31778710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 201 - 263
Target Start/End: Complemental strand, 32535513 - 32535451
Alignment:
Q  201 ttttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    |||| |||||||||||||||||  |||||||| ||||| ||||||||||||||||||||||||    
T  32535513 tttttggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccc 32535451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 201 - 262
Target Start/End: Complemental strand, 24301106 - 24301045
Alignment:
Q  201 ttttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcc 262  Q
    ||||||||||||||||||||||  |||||||| ||||| |||||||||||| ||||||||||    
T  24301106 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcc 24301045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 205 - 262
Target Start/End: Original strand, 39555577 - 39555634
Alignment:
Q  205 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcc 262  Q
    ||||||||||||||||||  |||||||| ||||| |||||||||||||||||||||||    
T  39555577 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcc 39555634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 206 - 263
Target Start/End: Complemental strand, 39556122 - 39556065
Alignment:
Q  206 ggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    |||||||||||||||||  |||||||| ||||| ||||||||||||||||||||||||    
T  39556122 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccc 39556065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 201 - 263
Target Start/End: Complemental strand, 26837905 - 26837843
Alignment:
Q  201 ttttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    ||||||||||||||||||||||  |||||||| ||||| ||||| ||||||||||| ||||||    
T  26837905 ttttaggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggttctgccc 26837843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 201 - 263
Target Start/End: Original strand, 30104477 - 30104539
Alignment:
Q  201 ttttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    ||||||||||||||||||||||  |||||||| ||||  |||||||||||| |||||||||||    
T  30104477 ttttaggcttaattacacttttggtcctcgtgttttgacctactcacgaaattggtcctgccc 30104539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 204 - 257
Target Start/End: Complemental strand, 4275911 - 4275858
Alignment:
Q  204 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtc 257  Q
    |||||||||||||||||||  |||||||| ||||| ||||||||||||||||||    
T  4275911 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 4275858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 205 - 262
Target Start/End: Complemental strand, 20841107 - 20841050
Alignment:
Q  205 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcc 262  Q
    ||||||||||||||||||  | |||||| ||||| |||||||||||||||||||||||    
T  20841107 aggcttaattacacttttggtgctcgtgttttggcctactcacgaaactggtcctgcc 20841050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 208 - 257
Target Start/End: Complemental strand, 25853770 - 25853721
Alignment:
Q  208 cttaattacacttttaatcctcgtgatttggtctactcacgaaactggtc 257  Q
    ||||||||||||||| ||||||||| |||| |||||||||||||||||||    
T  25853770 cttaattacacttttgatcctcgtgttttgctctactcacgaaactggtc 25853721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 203 - 263
Target Start/End: Complemental strand, 5137529 - 5137469
Alignment:
Q  203 ttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    ||||||||||||||||||||  |||||||| ||||| ||||||| ||||||||| ||||||    
T  5137529 ttaggcttaattacacttttggtcctcgtgttttggcctactcatgaaactggttctgccc 5137469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 201 - 261
Target Start/End: Complemental strand, 37727480 - 37727420
Alignment:
Q  201 ttttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgc 261  Q
    |||| |||||||||||||||||  ||||| || ||||| ||||||||||||||||||||||    
T  37727480 tttttggcttaattacacttttggtcctcatgttttggcctactcacgaaactggtcctgc 37727420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 207 - 263
Target Start/End: Original strand, 51473429 - 51473485
Alignment:
Q  207 gcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    ||||||||||||||||  |||||||| ||||||||| |||||||| |||||||||||    
T  51473429 gcttaattacacttttggtcctcgtgttttggtctattcacgaaattggtcctgccc 51473485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 203 - 262
Target Start/End: Original strand, 48452986 - 48453045
Alignment:
Q  203 ttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcc 262  Q
    |||||||| |||||||||||  || ||||| ||||| |||||||||||||||||||||||    
T  48452986 ttaggcttgattacacttttggtcatcgtgttttggcctactcacgaaactggtcctgcc 48453045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 205 - 263
Target Start/End: Original strand, 37726928 - 37726986
Alignment:
Q  205 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    ||||||||||||||||||  |||||||| |||||||| || ||||||||||| ||||||    
T  37726928 aggcttaattacacttttggtcctcgtgttttggtctgcttacgaaactggttctgccc 37726986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 205 - 262
Target Start/End: Original strand, 23644461 - 23644518
Alignment:
Q  205 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcc 262  Q
    ||||||||||||||||||  |||||||  ||||| |||||||||||| ||||||||||    
T  23644461 aggcttaattacacttttggtcctcgtattttggcctactcacgaaattggtcctgcc 23644518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 206 - 263
Target Start/End: Original strand, 25853234 - 25853291
Alignment:
Q  206 ggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    |||||||||||||||||  |||||||| ||||| |||||||||||| ||||| |||||    
T  25853234 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcatgccc 25853291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 205 - 262
Target Start/End: Original strand, 27393660 - 27393717
Alignment:
Q  205 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcc 262  Q
    ||||||||||||||||||  |||||||| ||||  |||||||| ||||||||||||||    
T  27393660 aggcttaattacacttttggtcctcgtgttttgacctactcacaaaactggtcctgcc 27393717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 205 - 262
Target Start/End: Complemental strand, 27394123 - 27394066
Alignment:
Q  205 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcc 262  Q
    ||||||||||||||||||  |||||||| ||||| ||||||||||||  |||||||||    
T  27394123 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaataggtcctgcc 27394066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 203 - 263
Target Start/End: Original strand, 17464488 - 17464548
Alignment:
Q  203 ttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    ||||||||||||||||||||  |||||||| ||||| ||| || ||||||||||| |||||    
T  17464488 ttaggcttaattacacttttggtcctcgtgttttggcctattcgcgaaactggtcatgccc 17464548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 259
Target Start/End: Complemental strand, 23645015 - 23644957
Alignment:
Q  201 ttttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcct 259  Q
    |||| |||||||||| ||||||  |||||||| ||||| |||||||||||| |||||||    
T  23645015 ttttcggcttaattatacttttggtcctcgtgttttggcctactcacgaaattggtcct 23644957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 209 - 263
Target Start/End: Complemental strand, 25612519 - 25612465
Alignment:
Q  209 ttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    ||||||||||||||  |||||||| ||||  |||||||||||| |||||||||||    
T  25612519 ttaattacacttttggtcctcgtgttttgacctactcacgaaattggtcctgccc 25612465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 209 - 263
Target Start/End: Original strand, 26274570 - 26274624
Alignment:
Q  209 ttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    ||||||||| |||| ||||| ||  ||||| ||||||||||||||||||||||||    
T  26274570 ttaattacatttttgatccttgtattttggactactcacgaaactggtcctgccc 26274624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 263
Target Start/End: Complemental strand, 30098309 - 30098251
Alignment:
Q  205 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    ||||||||||||||||||  |||||||| ||||   ||||||||||||||||| |||||    
T  30098309 aggcttaattacacttttggtcctcgtgttttgacatactcacgaaactggtcttgccc 30098251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 262
Target Start/End: Complemental strand, 37222118 - 37222060
Alignment:
Q  204 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcc 262  Q
    |||||||||||||||||||  |||||||| ||||  |||||||| ||| ||||||||||    
T  37222118 taggcttaattacacttttggtcctcgtgttttgccctactcacaaaattggtcctgcc 37222060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 206 - 263
Target Start/End: Original strand, 29801356 - 29801413
Alignment:
Q  206 ggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    |||||||||||||||||  || ||||| |||||  ||||||| |||||||||||||||    
T  29801356 ggcttaattacacttttggtcatcgtgttttggcatactcacaaaactggtcctgccc 29801413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 209 - 262
Target Start/End: Original strand, 32534962 - 32535015
Alignment:
Q  209 ttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcc 262  Q
    ||||||||||||||  |||||||| |||||  ||||||||||| ||||||||||    
T  32534962 ttaattacacttttggtcctcgtgttttggcatactcacgaaattggtcctgcc 32535015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 206 - 263
Target Start/End: Complemental strand, 50116954 - 50116897
Alignment:
Q  206 ggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    ||||||||||||||||| ||||||||| ||||   ||||||||||| ||||| |||||    
T  50116954 ggcttaattacacttttgatcctcgtgttttgacttactcacgaaattggtcatgccc 50116897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 1e-16; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 201 - 261
Target Start/End: Complemental strand, 34541098 - 34541038
Alignment:
Q  201 ttttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgc 261  Q
    ||||||||||||||||||||||  |||||||| ||||| ||||||||||||||||||||||    
T  34541098 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgc 34541038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 200 - 263
Target Start/End: Original strand, 11656449 - 11656512
Alignment:
Q  200 attttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    |||||||||||||||||||||||  |||||||| ||||| |||||||||||||||||| |||||    
T  11656449 attttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgccc 11656512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 204 - 263
Target Start/End: Original strand, 41681132 - 41681191
Alignment:
Q  204 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    |||||||||||||||||||  |||||||| ||||| ||||||||||||||||||||||||    
T  41681132 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccc 41681191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 197 - 263
Target Start/End: Original strand, 19176281 - 19176347
Alignment:
Q  197 taaattttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    ||||| ||||||||||||||||||||  |||||||| ||||| |||||||||||||| |||||||||    
T  19176281 taaatattaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcctgccc 19176347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 202 - 263
Target Start/End: Complemental strand, 19176839 - 19176778
Alignment:
Q  202 tttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    |||||||||||||||||||||  |||||||| ||||| ||||||||| ||||||||||||||    
T  19176839 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgtaactggtcctgccc 19176778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 209 - 263
Target Start/End: Original strand, 9928912 - 9928966
Alignment:
Q  209 ttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    ||||||||||||||  |||||||| |||| |||||||||||||||||||||||||    
T  9928912 ttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgccc 9928966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 205 - 263
Target Start/End: Complemental strand, 9930203 - 9930145
Alignment:
Q  205 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    ||||||||||||||||||  |||||||  ||||| ||||||||||||||||||||||||    
T  9930203 aggcttaattacacttttggtcctcgtattttggcctactcacgaaactggtcctgccc 9930145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 202 - 256
Target Start/End: Original strand, 12571859 - 12571913
Alignment:
Q  202 tttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggt 256  Q
    |||||||||||||||||||||  |||||||| ||||| |||||||||||||||||    
T  12571859 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggt 12571913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 205 - 263
Target Start/End: Complemental strand, 13225185 - 13225127
Alignment:
Q  205 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    ||||||||||||||||||  |||||||| ||||| |||||||||||||||||| |||||    
T  13225185 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgccc 13225127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 205 - 258
Target Start/End: Complemental strand, 11657003 - 11656950
Alignment:
Q  205 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcc 258  Q
    ||||||||||||||||||  |||||||| ||||| |||||||||||||||||||    
T  11657003 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcc 11656950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 202 - 263
Target Start/End: Original strand, 33742918 - 33742979
Alignment:
Q  202 tttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    |||||||||||||||||||||  |||||||| ||||  |||||||||||||||||| |||||    
T  33742918 tttaggcttaattacacttttggtcctcgtgttttgacctactcacgaaactggtcttgccc 33742979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 207 - 263
Target Start/End: Complemental strand, 31133764 - 31133708
Alignment:
Q  207 gcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    ||||||||||||||||  |||||||| ||||| ||||||||||||||| ||||||||    
T  31133764 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgccc 31133708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 204 - 263
Target Start/End: Original strand, 4629795 - 4629854
Alignment:
Q  204 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    ||||||||||| |||||||||| |||||| |||||  || ||||||||||||||||||||    
T  4629795 taggcttaattgcacttttaattctcgtgttttggcatattcacgaaactggtcctgccc 4629854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 200 - 263
Target Start/End: Complemental strand, 9178186 - 9178123
Alignment:
Q  200 attttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    ||||| |||||||||||||||||  |||||||| ||||| ||||||||||||||| || |||||    
T  9178186 atttttggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgccc 9178123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 204 - 263
Target Start/End: Original strand, 31133218 - 31133277
Alignment:
Q  204 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    |||||||||||||||||||  |||||||| ||||  ||||||||||||||||||| ||||    
T  31133218 taggcttaattacacttttggtcctcgtgttttgccctactcacgaaactggtcccgccc 31133277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 205 - 263
Target Start/End: Original strand, 44831246 - 44831304
Alignment:
Q  205 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    ||||||||||||||||||  ||||| || ||||| |||||||||||| |||||||||||    
T  44831246 aggcttaattacacttttggtcctcatgttttggcctactcacgaaattggtcctgccc 44831304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 203 - 261
Target Start/End: Complemental strand, 44831793 - 44831735
Alignment:
Q  203 ttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgc 261  Q
    ||||||||||| ||||||||  |||||||| |||||  |||||||||||||||||||||    
T  44831793 ttaggcttaataacacttttggtcctcgtgttttggcatactcacgaaactggtcctgc 44831735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 206 - 259
Target Start/End: Complemental strand, 41681679 - 41681626
Alignment:
Q  206 ggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcct 259  Q
    |||||||||||||||||  |||||||| ||||| ||| ||||||||||||||||    
T  41681679 ggcttaattacacttttggtcctcgtgttttggcctaatcacgaaactggtcct 41681626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 209 - 261
Target Start/End: Complemental strand, 4630328 - 4630276
Alignment:
Q  209 ttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgc 261  Q
    |||||||||||||| ||| ||||| ||||| |||||||||||| |||||||||    
T  4630328 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgc 4630276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 209 - 253
Target Start/End: Complemental strand, 12572393 - 12572349
Alignment:
Q  209 ttaattacacttttaatcctcgtgatttggtctactcacgaaact 253  Q
    ||||||||||||||  |||||||| ||||||||||||||||||||    
T  12572393 ttaattacacttttggtcctcgtgttttggtctactcacgaaact 12572349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 199 - 262
Target Start/End: Original strand, 10918119 - 10918182
Alignment:
Q  199 aattttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcc 262  Q
    ||||||||| ||||||||| ||||  |||||||| |||| ||||||||||||| ||||| ||||    
T  10918119 aattttaggtttaattacattttttgtcctcgtgttttgatctactcacgaaattggtcttgcc 10918182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 209 - 263
Target Start/End: Original strand, 33328161 - 33328215
Alignment:
Q  209 ttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    ||||||||||||||  |||||||| ||||| ||||||||||||||| || |||||    
T  33328161 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgccc 33328215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 45; Significance: 1e-16; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 195 - 263
Target Start/End: Original strand, 22434168 - 22434236
Alignment:
Q  195 attaaattttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    |||||||||| |||||||||||||||||  |||||||| |||||  |||||||||||||||||||||||    
T  22434168 attaaatttttggcttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcctgccc 22434236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 203 - 263
Target Start/End: Complemental strand, 23494991 - 23494931
Alignment:
Q  203 ttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    ||||||||||||||||||||  |||||||| ||||| ||||||||||||||||||||||||    
T  23494991 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccc 23494931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 204 - 263
Target Start/End: Original strand, 15523233 - 15523292
Alignment:
Q  204 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    |||||||||||||||||||  |||||||| ||||| ||||||||||||||||||||||||    
T  15523233 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccc 15523292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 204 - 263
Target Start/End: Complemental strand, 51021342 - 51021283
Alignment:
Q  204 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    ||||||||||||||||||| ||||||||| ||||| |||||||||||| |||||||||||    
T  51021342 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaattggtcctgccc 51021283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 201 - 262
Target Start/End: Complemental strand, 11153697 - 11153636
Alignment:
Q  201 ttttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcc 262  Q
    |||| |||||||||||||||||  |||||||| ||||| |||||||||||||||||||||||    
T  11153697 tttttggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcc 11153636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 204 - 263
Target Start/End: Complemental strand, 25447783 - 25447724
Alignment:
Q  204 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    |||||||||||||||||||  || ||||| ||||| ||||||||||||||||||||||||    
T  25447783 taggcttaattacacttttggtcttcgtgttttggcctactcacgaaactggtcctgccc 25447724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 200 - 263
Target Start/End: Original strand, 25937664 - 25937727
Alignment:
Q  200 attttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    |||||||||||||||||| ||||  |||||||| ||| | ||||||||||||||||||||||||    
T  25937664 attttaggcttaattacatttttggtcctcgtgttttagcctactcacgaaactggtcctgccc 25937727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 206 - 261
Target Start/End: Complemental strand, 35363146 - 35363091
Alignment:
Q  206 ggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgc 261  Q
    ||||||||||||||||| ||||||||| ||||| ||||||||||||||||| ||||    
T  35363146 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggttctgc 35363091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 205 - 263
Target Start/End: Complemental strand, 15523780 - 15523722
Alignment:
Q  205 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    ||||||||||||||||||  || ||||| ||||| ||||||||||||||||||||||||    
T  15523780 aggcttaattacacttttggtcatcgtgttttgggctactcacgaaactggtcctgccc 15523722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 200 - 261
Target Start/End: Complemental strand, 4220110 - 4220049
Alignment:
Q  200 attttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgc 261  Q
    |||||||| ||||||||||||||  |||||||| ||||| ||||||||||||||| ||||||    
T  4220110 attttaggtttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgc 4220049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 202 - 263
Target Start/End: Complemental strand, 20958408 - 20958347
Alignment:
Q  202 tttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    |||| ||||||||||||||||| |||||||  ||||| |||||||||||| |||||||||||    
T  20958408 tttacgcttaattacacttttagtcctcgtattttggcctactcacgaaaatggtcctgccc 20958347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 206 - 263
Target Start/End: Original strand, 25447247 - 25447304
Alignment:
Q  206 ggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    |||||||||||||||||  |||||||| ||||| ||||||| ||||||||||||||||    
T  25447247 ggcttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcctgccc 25447304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 206 - 263
Target Start/End: Original strand, 46193405 - 46193462
Alignment:
Q  206 ggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    |||||||||||||||||  |||||||| ||||| |||||||||||| |||||||||||    
T  46193405 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgccc 46193462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 202 - 262
Target Start/End: Complemental strand, 22434725 - 22434665
Alignment:
Q  202 tttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcc 262  Q
    |||||| ||||||||| ||||  |||||||| ||||| |||||||||||||||||||||||    
T  22434725 tttaggtttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcctgcc 22434665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 192 - 263
Target Start/End: Complemental strand, 25938230 - 25938159
Alignment:
Q  192 accattaaattttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    ||||||||| |  ||||||||||||||||||  |||| ||| ||||| |||||||||||| |||||||||||    
T  25938230 accattaaaataaaggcttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgccc 25938159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 208 - 263
Target Start/End: Complemental strand, 46193948 - 46193893
Alignment:
Q  208 cttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    |||||||||||||||  |||||||| ||||| |||||||||||| |||||||||||    
T  46193948 cttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgccc 46193893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 208 - 262
Target Start/End: Original strand, 4219559 - 4219613
Alignment:
Q  208 cttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcc 262  Q
    |||||||||| ||||  |||||||| ||||| |||||||||||||||||||||||    
T  4219559 cttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcctgcc 4219613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 205 - 263
Target Start/End: Complemental strand, 16318322 - 16318264
Alignment:
Q  205 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    ||||||||||||||||||  |||||||| ||||| |||||||| |||||| ||||||||    
T  16318322 aggcttaattacacttttggtcctcgtgttttggcctactcacaaaactgatcctgccc 16318264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 203 - 257
Target Start/End: Complemental strand, 18764068 - 18764014
Alignment:
Q  203 ttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtc 257  Q
    |||| |||||||||||||||  |||||||| ||||| ||||||||||||||||||    
T  18764068 ttagacttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 18764014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 203 - 257
Target Start/End: Complemental strand, 20471059 - 20471005
Alignment:
Q  203 ttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtc 257  Q
    ||||||||||||||||||||  |||||||| ||||| ||||| ||||||||||||    
T  20471059 ttaggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtc 20471005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 209 - 263
Target Start/End: Complemental strand, 48526723 - 48526669
Alignment:
Q  209 ttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    ||||||| ||||||  |||||||| |||||||||||||||||||||||| |||||    
T  48526723 ttaattatacttttggtcctcgtgttttggtctactcacgaaactggtcttgccc 48526669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 206 - 263
Target Start/End: Complemental strand, 45082969 - 45082912
Alignment:
Q  206 ggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    |||||||||||||||||  |||||||| |||||  ||||||||||||||||| |||||    
T  45082969 ggcttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcatgccc 45082912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 203 - 263
Target Start/End: Original strand, 12234326 - 12234386
Alignment:
Q  203 ttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    ||||||||||||||||||||  ||||| || |||||  || ||||||||||||||||||||    
T  12234326 ttaggcttaattacacttttggtcctcttgttttggcttattcacgaaactggtcctgccc 12234386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 208 - 263
Target Start/End: Original strand, 2118295 - 2118350
Alignment:
Q  208 cttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    |||||||||||||||  |||| ||| ||||| |||||||||||| |||||||||||    
T  2118295 cttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgccc 2118350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 208 - 263
Target Start/End: Original strand, 23494445 - 23494500
Alignment:
Q  208 cttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    |||||||||| ||||  |||||||| ||||| |||||||||||||| |||||||||    
T  23494445 cttaattacatttttggtcctcgtgttttggcctactcacgaaactagtcctgccc 23494500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 204 - 263
Target Start/End: Complemental strand, 33110011 - 33109952
Alignment:
Q  204 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    |||||||||||||||||||  ||||| || ||||| || ||||||||| |||||||||||    
T  33110011 taggcttaattacacttttggtcctcatgttttggcctgctcacgaaattggtcctgccc 33109952  T

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Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 208 - 263
Target Start/End: Complemental strand, 38962362 - 38962307
Alignment:
Q  208 cttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    |||||||||| ||||  |||||||| ||||||||| ||||||||||||||| ||||    
T  38962362 cttaattacatttttggtcctcgtgttttggtctattcacgaaactggtccggccc 38962307  T

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Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 204 - 263
Target Start/End: Complemental strand, 54995614 - 54995555
Alignment:
Q  204 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    |||| ||||||||||||||  |||||||| ||||| ||||||||||||||| || |||||    
T  54995614 taggtttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgccc 54995555  T

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Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 263
Target Start/End: Complemental strand, 10258433 - 10258375
Alignment:
Q  205 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    ||||||||||||||||||  |||||||| | ||| ||||||| |||| |||||||||||    
T  10258433 aggcttaattacacttttggtcctcgtgttgtggcctactcaggaaattggtcctgccc 10258375  T

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Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 263
Target Start/End: Original strand, 51020792 - 51020854
Alignment:
Q  201 ttttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    |||||||||||||||||||||| |||||| || |||||   | |||| |||||||||||||||    
T  51020792 ttttaggcttaattacacttttgatcctcatgttttggctaattcactaaactggtcctgccc 51020854  T

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Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 206 - 263
Target Start/End: Complemental strand, 12234874 - 12234817
Alignment:
Q  206 ggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    |||||||||| ||||||  |||||||| ||||| ||||||||||||||| || |||||    
T  12234874 ggcttaattatacttttggtcctcgtgttttggcctactcacgaaactgatcatgccc 12234817  T

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Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 261
Target Start/End: Original strand, 33109686 - 33109739
Alignment:
Q  208 cttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgc 261  Q
    |||||||||| ||||  |||||||| |||||  |||||||||||||||||||||    
T  33109686 cttaattacatttttggtcctcgtgttttggcatactcacgaaactggtcctgc 33109739  T

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Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 262
Target Start/End: Complemental strand, 16691616 - 16691560
Alignment:
Q  206 ggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcc 262  Q
    ||||||||||||||||| ||||  ||| ||||  |||||||||||| ||||||||||    
T  16691616 ggcttaattacacttttgatccctgtgttttgacctactcacgaaaatggtcctgcc 16691560  T

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Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 260
Target Start/End: Original strand, 48293592 - 48293648
Alignment:
Q  204 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctg 260  Q
    |||||||||||||||||||  |||||||| |||||  ||||||||||| || |||||    
T  48293592 taggcttaattacacttttggtcctcgtgttttggcttactcacgaaattgatcctg 48293648  T

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Target: scaffold1223 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold1223
Description:

Target: scaffold1223; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 206 - 263
Target Start/End: Complemental strand, 1286 - 1229
Alignment:
Q  206 ggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    |||||||||||||||||| |||||||| |||||  |||||||||||||||||||||||    
T  1286 ggcttaattacacttttagtcctcgtgttttggcttactcacgaaactggtcctgccc 1229  T

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Target: scaffold1223; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 208 - 263
Target Start/End: Original strand, 755 - 810
Alignment:
Q  208 cttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    |||||||||||||||  || ||||| ||||| |||||||||| |||||||||||||    
T  755 cttaattacacttttggtcttcgtgttttggcctactcacgatactggtcctgccc 810  T

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Target: scaffold0951 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0951
Description:

Target: scaffold0951; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 203 - 263
Target Start/End: Complemental strand, 2215 - 2155
Alignment:
Q  203 ttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    ||||||||||||||||||||  |||||||| ||||| ||||| ||||||||||||||||||    
T  2215 ttaggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgccc 2155  T

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Target: scaffold0951; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 204 - 263
Target Start/End: Original strand, 1665 - 1724
Alignment:
Q  204 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    |||||||||||||||||||  ||||| || ||||| ||||||||||||||||||||||||    
T  1665 taggcttaattacacttttggtcctcctgttttggcctactcacgaaactggtcctgccc 1724  T

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Target: scaffold0295 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 203 - 263
Target Start/End: Original strand, 4790 - 4850
Alignment:
Q  203 ttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    ||||||||||||||||||||  |||||||| ||||| |||||||||||||||||| |||||    
T  4790 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgccc 4850  T

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Target: scaffold0295; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 257
Target Start/End: Complemental strand, 5334 - 5285
Alignment:
Q  208 cttaattacacttttaatcctcgtgatttggtctactcacgaaactggtc 257  Q
    |||||||||||||||  |||||||| ||||| ||| ||||||||||||||    
T  5334 cttaattacacttttggtcctcgtgttttggcctagtcacgaaactggtc 5285  T

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Target: scaffold0176 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 200 - 263
Target Start/End: Complemental strand, 19172 - 19109
Alignment:
Q  200 attttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    ||||| |||||||||||||||||  |||||||| ||||| |||||||||||||| |||||||||    
T  19172 atttttggcttaattacacttttggtcctcgtgttttggcctactcacgaaacttgtcctgccc 19109  T

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Target: scaffold0057 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 209 - 259
Target Start/End: Complemental strand, 62000 - 61950
Alignment:
Q  209 ttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcct 259  Q
    |||||||||||||| ||||||||| |||||||||||||||||| |||||||    
T  62000 ttaattacacttttgatcctcgtgttttggtctactcacgaaaatggtcct 61950  T

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Target: scaffold0057; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 204 - 262
Target Start/End: Original strand, 61026 - 61084
Alignment:
Q  204 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcc 262  Q
    ||||||||| ||||||||| ||||||||| ||||| |||||||||||| || |||||||    
T  61026 taggcttaagtacacttttgatcctcgtgttttggcctactcacgaaaatgatcctgcc 61084  T

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Target: scaffold0417 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 206 - 263
Target Start/End: Complemental strand, 11168 - 11111
Alignment:
Q  206 ggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    |||||||||||||||||  |||||||| ||||| ||||| ||||||||||||||||||    
T  11168 ggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgccc 11111  T

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Target: scaffold0019 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 202 - 263
Target Start/End: Complemental strand, 134222 - 134161
Alignment:
Q  202 tttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    |||||||||||||||||||||  |||||||| ||||| |||||||||||||| ||| |||||    
T  134222 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcatgccc 134161  T

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Target: scaffold0432 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 209 - 256
Target Start/End: Complemental strand, 10414 - 10367
Alignment:
Q  209 ttaattacacttttaatcctcgtgatttggtctactcacgaaactggt 256  Q
    ||||||||||||||  |||||||| |||||||||||||||||||||||    
T  10414 ttaattacacttttggtcctcgtgttttggtctactcacgaaactggt 10367  T

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Target: scaffold0273 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 204 - 263
Target Start/End: Complemental strand, 4754 - 4695
Alignment:
Q  204 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    |||||||||||||||||||  || ||||| |||||  |||||||||||||||||||||||    
T  4754 taggcttaattacacttttggtcttcgtgttttggcatactcacgaaactggtcctgccc 4695  T

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Target: scaffold0027 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 209 - 262
Target Start/End: Original strand, 42172 - 42225
Alignment:
Q  209 ttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcc 262  Q
    ||||||||||||||| | |||||| ||||||||| ||||||||||| |||||||    
T  42172 ttaattacacttttagttctcgtgttttggtctaatcacgaaactgatcctgcc 42225  T

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Target: scaffold0027; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 263
Target Start/End: Complemental strand, 42707 - 42646
Alignment:
Q  202 tttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    |||||||||||||| ||||||   ||||||| ||||||||||||| ||||||| | ||||||    
T  42707 tttaggcttaattatacttttggncctcgtgttttggtctactcaggaaactgattctgccc 42646  T

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Target: scaffold1585 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1585
Description:

Target: scaffold1585; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 207 - 251
Target Start/End: Original strand, 568 - 612
Alignment:
Q  207 gcttaattacacttttaatcctcgtgatttggtctactcacgaaa 251  Q
    |||||||||||||||| ||||||||| ||||| ||||||||||||    
T  568 gcttaattacacttttgatcctcgtgttttggcctactcacgaaa 612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 209 - 263
Target Start/End: Complemental strand, 64847 - 64793
Alignment:
Q  209 ttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 263  Q
    ||||||||||||||  |||||||| |||||  |||||||||||||||||| ||||    
T  64847 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcccgccc 64793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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