View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2071_low_105 (Length: 234)
Name: NF2071_low_105
Description: NF2071
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2071_low_105 |
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Alignment Details
Target: chr5 (Bit Score: 191; Significance: 1e-104; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 21 - 219
Target Start/End: Complemental strand, 42614444 - 42614246
Alignment:
| Q |
21 |
catgcatgacatatggtaagaataacacctacttatatcgatgttaaatttagtatgcatatttatattttacgtaagtatttttcaataaacaaagatt |
120 |
Q |
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| T |
42614444 |
catgcatgacatatggtaagaataacacctacttatatcgatgttaaatttagtatgcatatttatattttacgtaagtatttttcaataaacaaagatt |
42614345 |
T |
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| Q |
121 |
gggtacatagattaacatcctaatattgtattatcatttatgtcagatgataaactattaagatcctgacagttttaaatagttcgccttatacctttg |
219 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| |
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| T |
42614344 |
gggtacatagattaacatcctaatattgtattatcatttatgtcagatgataaactattaagatccggacagttttaaatagttcgccttatacttttg |
42614246 |
T |
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